BLASTX nr result
ID: Lithospermum23_contig00031311
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00031311
(331 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CBI25875.3 unnamed protein product, partial [Vitis vinifera] 58 1e-07
KDO50856.1 hypothetical protein CISIN_1g0154403mg, partial [Citr... 54 3e-07
XP_019074131.1 PREDICTED: RNA polymerase II transcription factor... 57 3e-07
CAN81292.1 hypothetical protein VITISV_005315 [Vitis vinifera] 57 3e-07
XP_003635508.2 PREDICTED: RNA polymerase II transcription factor... 57 3e-07
XP_011090547.1 PREDICTED: general transcription factor IIH subun... 57 3e-07
XP_012844594.1 PREDICTED: general transcription factor IIH subun... 57 3e-07
CDP09632.1 unnamed protein product [Coffea canephora] 57 3e-07
XP_004294031.1 PREDICTED: LOW QUALITY PROTEIN: general transcrip... 57 5e-07
KDO50853.1 hypothetical protein CISIN_1g0154403mg, partial [Citr... 54 5e-07
XP_018820182.1 PREDICTED: RNA polymerase II transcription factor... 56 6e-07
XP_010316742.1 PREDICTED: RNA polymerase II transcription factor... 56 8e-07
XP_019175446.1 PREDICTED: RNA polymerase II transcription factor... 56 8e-07
XP_019175439.1 PREDICTED: RNA polymerase II transcription factor... 56 8e-07
OMO84837.1 Transcription factor TFIIH subunit p52/Tfb2 [Corchoru... 55 1e-06
KJB69493.1 hypothetical protein B456_011G026700 [Gossypium raimo... 55 1e-06
KJB69494.1 hypothetical protein B456_011G026700 [Gossypium raimo... 55 1e-06
XP_009631137.1 PREDICTED: RNA polymerase II transcription factor... 55 2e-06
XP_010940421.1 PREDICTED: RNA polymerase II transcription factor... 55 2e-06
XP_016457361.1 PREDICTED: RNA polymerase II transcription factor... 55 2e-06
>CBI25875.3 unnamed protein product, partial [Vitis vinifera]
Length = 258
Score = 57.8 bits (138), Expect = 1e-07
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Frame = +1
Query: 1 RKESWFIPTKLATNLSISLSDTSARKQVFVHVFLH-RIIYFSV*VSH**L*K-FVYIEFL 174
RKESWFIPTKLATNLS+SLSDTS+RKQ FV V + R+ +S H + + F +
Sbjct: 53 RKESWFIPTKLATNLSMSLSDTSSRKQGFVVVETNFRLYAYSSSKLHCEILRLFSRYASM 112
Query: 175 MFSC*LILCCYNFPEVILICLILL 246
+F C L+ CY+ + L+ + L+
Sbjct: 113 LFDC-LLCICYSSQKGTLLDVSLI 135
>KDO50856.1 hypothetical protein CISIN_1g0154403mg, partial [Citrus sinensis]
Length = 103
Score = 54.3 bits (129), Expect = 3e-07
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +1
Query: 1 RKESWFIPTKLATNLSISLSDTSARKQVFVHV 96
RKESWFIPTKLATNLS+SL+D+SARK+ FV V
Sbjct: 18 RKESWFIPTKLATNLSMSLTDSSARKEGFVVV 49
>XP_019074131.1 PREDICTED: RNA polymerase II transcription factor B subunit 2
[Vitis vinifera]
Length = 442
Score = 57.0 bits (136), Expect = 3e-07
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +1
Query: 1 RKESWFIPTKLATNLSISLSDTSARKQVFVHV 96
RKESWFIPTKLATNLS+SLSDTS+RKQ FV V
Sbjct: 261 RKESWFIPTKLATNLSMSLSDTSSRKQGFVVV 292
>CAN81292.1 hypothetical protein VITISV_005315 [Vitis vinifera]
Length = 451
Score = 57.0 bits (136), Expect = 3e-07
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +1
Query: 1 RKESWFIPTKLATNLSISLSDTSARKQVFVHV 96
RKESWFIPTKLATNLS+SLSDTS+RKQ FV V
Sbjct: 270 RKESWFIPTKLATNLSMSLSDTSSRKQGFVVV 301
>XP_003635508.2 PREDICTED: RNA polymerase II transcription factor B subunit 2
[Vitis vinifera]
Length = 451
Score = 57.0 bits (136), Expect = 3e-07
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +1
Query: 1 RKESWFIPTKLATNLSISLSDTSARKQVFVHV 96
RKESWFIPTKLATNLS+SLSDTS+RKQ FV V
Sbjct: 270 RKESWFIPTKLATNLSMSLSDTSSRKQGFVVV 301
>XP_011090547.1 PREDICTED: general transcription factor IIH subunit 4 [Sesamum
indicum]
Length = 453
Score = 57.0 bits (136), Expect = 3e-07
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +1
Query: 1 RKESWFIPTKLATNLSISLSDTSARKQVFVHV 96
RKESWFIPTKLATNLSISL+DTS+RKQ FV V
Sbjct: 271 RKESWFIPTKLATNLSISLADTSSRKQGFVVV 302
>XP_012844594.1 PREDICTED: general transcription factor IIH subunit 4 [Erythranthe
guttata] EYU31406.1 hypothetical protein
MIMGU_mgv1a006192mg [Erythranthe guttata]
Length = 453
Score = 57.0 bits (136), Expect = 3e-07
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +1
Query: 1 RKESWFIPTKLATNLSISLSDTSARKQVFVHV 96
RKESWFIPTKLATNLSISL+DTS+RKQ FV V
Sbjct: 271 RKESWFIPTKLATNLSISLADTSSRKQGFVVV 302
>CDP09632.1 unnamed protein product [Coffea canephora]
Length = 454
Score = 57.0 bits (136), Expect = 3e-07
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +1
Query: 1 RKESWFIPTKLATNLSISLSDTSARKQVFVHV 96
RKESWFIPTKLATNLSISLSDTS+RKQ +V V
Sbjct: 272 RKESWFIPTKLATNLSISLSDTSSRKQGYVVV 303
>XP_004294031.1 PREDICTED: LOW QUALITY PROTEIN: general transcription factor IIH
subunit 4 [Fragaria vesca subsp. vesca]
Length = 453
Score = 56.6 bits (135), Expect = 5e-07
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = +1
Query: 1 RKESWFIPTKLATNLSISLSDTSARKQVFVHV 96
RKESWFIPTKLATNLS+SL+DTS+RKQ FV V
Sbjct: 269 RKESWFIPTKLATNLSVSLTDTSSRKQGFVVV 300
>KDO50853.1 hypothetical protein CISIN_1g0154403mg, partial [Citrus sinensis]
KDO50854.1 hypothetical protein CISIN_1g0154403mg,
partial [Citrus sinensis] KDO50855.1 hypothetical
protein CISIN_1g0154403mg, partial [Citrus sinensis]
Length = 129
Score = 54.3 bits (129), Expect = 5e-07
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +1
Query: 1 RKESWFIPTKLATNLSISLSDTSARKQVFVHV 96
RKESWFIPTKLATNLS+SL+D+SARK+ FV V
Sbjct: 44 RKESWFIPTKLATNLSMSLTDSSARKEGFVVV 75
>XP_018820182.1 PREDICTED: RNA polymerase II transcription factor B subunit 2
[Juglans regia]
Length = 451
Score = 56.2 bits (134), Expect = 6e-07
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = +1
Query: 1 RKESWFIPTKLATNLSISLSDTSARKQVFVHV 96
RKESWFIPTKLATNLS+SL+D+SARKQ FV V
Sbjct: 270 RKESWFIPTKLATNLSVSLTDSSARKQGFVVV 301
>XP_010316742.1 PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X3 [Solanum lycopersicum]
Length = 365
Score = 55.8 bits (133), Expect = 8e-07
Identities = 29/42 (69%), Positives = 35/42 (83%)
Frame = +1
Query: 1 RKESWFIPTKLATNLSISLSDTSARKQVFVHVFLHRIIYFSV 126
RKESWFIPTKLATNLSISL+DT+ RKQV + L +++FSV
Sbjct: 271 RKESWFIPTKLATNLSISLADTTTRKQV-PNDLLLLLVFFSV 311
>XP_019175446.1 PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X2 [Ipomoea nil]
Length = 452
Score = 55.8 bits (133), Expect = 8e-07
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = +1
Query: 1 RKESWFIPTKLATNLSISLSDTSARKQVFVHV 96
RKESWFIPTKLATNLSISL+DTS+RK+ FV V
Sbjct: 271 RKESWFIPTKLATNLSISLADTSSRKEGFVVV 302
>XP_019175439.1 PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X1 [Ipomoea nil]
Length = 466
Score = 55.8 bits (133), Expect = 8e-07
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = +1
Query: 1 RKESWFIPTKLATNLSISLSDTSARKQVFVHV 96
RKESWFIPTKLATNLSISL+DTS+RK+ FV V
Sbjct: 285 RKESWFIPTKLATNLSISLADTSSRKEGFVVV 316
>OMO84837.1 Transcription factor TFIIH subunit p52/Tfb2 [Corchorus capsularis]
Length = 300
Score = 55.1 bits (131), Expect = 1e-06
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +1
Query: 1 RKESWFIPTKLATNLSISLSDTSARKQVFVHV 96
RKESWFIPTKLATNLS+SL+D+S+RKQ FV V
Sbjct: 118 RKESWFIPTKLATNLSVSLTDSSSRKQGFVVV 149
>KJB69493.1 hypothetical protein B456_011G026700 [Gossypium raimondii]
Length = 339
Score = 55.1 bits (131), Expect = 1e-06
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +1
Query: 1 RKESWFIPTKLATNLSISLSDTSARKQVFVHV 96
RKESWFIPTKLATNLS+SL+D+S+RKQ FV V
Sbjct: 157 RKESWFIPTKLATNLSVSLTDSSSRKQGFVVV 188
>KJB69494.1 hypothetical protein B456_011G026700 [Gossypium raimondii]
Length = 362
Score = 55.1 bits (131), Expect = 1e-06
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +1
Query: 1 RKESWFIPTKLATNLSISLSDTSARKQVFVHV 96
RKESWFIPTKLATNLS+SL+D+S+RKQ FV V
Sbjct: 269 RKESWFIPTKLATNLSVSLTDSSSRKQGFVVV 300
>XP_009631137.1 PREDICTED: RNA polymerase II transcription factor B subunit 2-like
isoform X3 [Nicotiana tomentosiformis]
Length = 386
Score = 55.1 bits (131), Expect = 2e-06
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = +1
Query: 1 RKESWFIPTKLATNLSISLSDTSARKQVFV 90
RKESWFIPTKLATNLSISL+DT++RKQ F+
Sbjct: 271 RKESWFIPTKLATNLSISLADTTSRKQGFI 300
>XP_010940421.1 PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X3 [Elaeis guineensis]
Length = 390
Score = 55.1 bits (131), Expect = 2e-06
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +1
Query: 1 RKESWFIPTKLATNLSISLSDTSARKQVFVHV 96
RKESWFIPTKLATNLS+SLSD+S+RK+ FV V
Sbjct: 209 RKESWFIPTKLATNLSVSLSDSSSRKEGFVVV 240
>XP_016457361.1 PREDICTED: RNA polymerase II transcription factor B subunit 2-like
isoform X2 [Nicotiana tabacum]
Length = 391
Score = 55.1 bits (131), Expect = 2e-06
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = +1
Query: 1 RKESWFIPTKLATNLSISLSDTSARKQVFV 90
RKESWFIPTKLATNLSISL+DT++RKQ F+
Sbjct: 209 RKESWFIPTKLATNLSISLADTTSRKQGFI 238