BLASTX nr result
ID: Lithospermum23_contig00030688
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00030688
(389 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010692480.1 PREDICTED: uncharacterized protein LOC104905592 [... 90 1e-24
KYP63606.1 Retrovirus-related Pol polyprotein from transposon TN... 84 7e-24
KYP61781.1 Retrovirus-related Pol polyprotein from transposon TN... 82 2e-23
XP_010690733.1 PREDICTED: uncharacterized protein LOC104904233 [... 75 1e-22
XP_010684138.1 PREDICTED: uncharacterized protein LOC104898735 [... 75 1e-22
XP_010490134.1 PREDICTED: uncharacterized protein LOC104767865 [... 86 2e-22
KYP57918.1 Retrovirus-related Pol polyprotein from transposon TN... 78 4e-22
CAN74847.1 hypothetical protein VITISV_028741 [Vitis vinifera] 85 1e-21
CAN73272.1 hypothetical protein VITISV_013115 [Vitis vinifera] 85 1e-21
CAN83015.1 hypothetical protein VITISV_041694 [Vitis vinifera] 85 1e-21
KYP64173.1 Retrovirus-related Pol polyprotein from transposon TN... 80 1e-21
CAN80919.1 hypothetical protein VITISV_002640 [Vitis vinifera] 84 2e-21
CAN82171.1 hypothetical protein VITISV_040546 [Vitis vinifera] 84 3e-21
XP_019085390.1 PREDICTED: uncharacterized protein LOC109126341 [... 84 4e-21
XP_010274487.1 PREDICTED: uncharacterized protein LOC104609798 [... 81 4e-21
BAA97287.1 retroelement pol polyprotein-like [Arabidopsis thaliana] 82 7e-21
AAC67205.1 putative retroelement pol polyprotein [Arabidopsis th... 82 7e-21
XP_010674610.1 PREDICTED: uncharacterized protein LOC104890733 [... 84 9e-21
KYP32861.1 Retrovirus-related Pol polyprotein from transposon TN... 73 1e-20
BAA97099.1 retroelement pol polyprotein-like [Arabidopsis thaliana] 79 1e-20
>XP_010692480.1 PREDICTED: uncharacterized protein LOC104905592 [Beta vulgaris
subsp. vulgaris]
Length = 1085
Score = 90.1 bits (222), Expect(2) = 1e-24
Identities = 40/69 (57%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Frame = -1
Query: 209 DLWHRRLGHPFDKVIRSLPFISSTSHLS--NKACIVCHQAKHTWDSFVTSEHKTTSCFDL 36
DLWH+RLGHP ++V++ LP I S+S N C VC AK T DSF TSEHK + F+L
Sbjct: 523 DLWHQRLGHPSERVVKLLPAIKSSSDKKKLNNVCDVCPMAKQTRDSFPTSEHKASRLFEL 582
Query: 35 IHCDLWGPY 9
+HCDLWGPY
Sbjct: 583 VHCDLWGPY 591
Score = 50.4 bits (119), Expect(2) = 1e-24
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = -2
Query: 361 NCVIQFTKNSCIIQDSISRTLIGAGERQDGLYYFCSV 251
+C IQFT + C IQD S TLIGAGER+ GLYYF +V
Sbjct: 472 HCTIQFTPSLCAIQDLPSGTLIGAGERRGGLYYFRTV 508
>KYP63606.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 320
Score = 83.6 bits (205), Expect(2) = 7e-24
Identities = 37/70 (52%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Frame = -1
Query: 212 LDLWHRRLGHPFDKVIRSLPFISSTS--HLSNKACIVCHQAKHTWDSFVTSEHKTTSCFD 39
+DLWH+RLGHP K+ + +P +S L NK C +C +AK + D F SEHK + FD
Sbjct: 136 VDLWHKRLGHPSFKISKLIPELSENKCKDLLNKNCDICFRAKQSRDMFPLSEHKANNIFD 195
Query: 38 LIHCDLWGPY 9
LIHCDLWGPY
Sbjct: 196 LIHCDLWGPY 205
Score = 54.3 bits (129), Expect(2) = 7e-24
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = -2
Query: 370 DYMNCVIQFTKNSCIIQDSISRTLIGAGERQDGLYYFCSV 251
D N V+QFT C++QD IS+TLIGAG+R DGLYYF V
Sbjct: 83 DDSNYVVQFTNKLCVMQDRISKTLIGAGKRIDGLYYFRGV 122
>KYP61781.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1413
Score = 82.0 bits (201), Expect(2) = 2e-23
Identities = 40/71 (56%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Frame = -1
Query: 209 DLWHRRLGHPFDKVIRSLPFI--SSTSHLSNKACIVCHQAKHTWDSFVTSEHKTTSCFDL 36
DLWH+RLGHP KV+ +P I S + L NKAC VC +AK +SF S +KT F L
Sbjct: 467 DLWHKRLGHPSPKVVELIPNIGFSRSDALCNKACDVCLRAKQCRESFPISINKTMVIFQL 526
Query: 35 IHCDLWGPYHT 3
IHCDLWGPY T
Sbjct: 527 IHCDLWGPYRT 537
Score = 54.7 bits (130), Expect(2) = 2e-23
Identities = 22/35 (62%), Positives = 29/35 (82%)
Frame = -2
Query: 364 MNCVIQFTKNSCIIQDSISRTLIGAGERQDGLYYF 260
+NC +QFT C+IQD I RT+IGAGE+++GLYYF
Sbjct: 415 LNCKVQFTNKFCVIQDRILRTVIGAGEQREGLYYF 449
>XP_010690733.1 PREDICTED: uncharacterized protein LOC104904233 [Beta vulgaris
subsp. vulgaris]
Length = 643
Score = 75.5 bits (184), Expect(2) = 1e-22
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Frame = -1
Query: 212 LDLWHRRLGHPFDKVIRSLPFISST--SHLSNKACIVCHQAKHTWDSFVTSEHKTTSCFD 39
+D+WH+RLGHP +KV+R LP +S + S + C VC +A SF S + + F+
Sbjct: 500 IDIWHKRLGHPSEKVLRHLPCVSPSDVSSCNKDWCDVCFRAHQPRTSFSRSNSRASRMFE 559
Query: 38 LIHCDLWGPYHT 3
L+HCDLWGPY T
Sbjct: 560 LVHCDLWGPYRT 571
Score = 58.2 bits (139), Expect(2) = 1e-22
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = -2
Query: 370 DYMNCVIQFTKNSCIIQDSISRTLIGAGERQDGLYYFCSVPGV 242
D NC+IQ TK C++QD +RTLIGAGER DGL++F VP V
Sbjct: 447 DSANCIIQVTKTLCVLQDRRTRTLIGAGERGDGLFFFRGVPKV 489
>XP_010684138.1 PREDICTED: uncharacterized protein LOC104898735 [Beta vulgaris
subsp. vulgaris]
Length = 456
Score = 75.5 bits (184), Expect(2) = 1e-22
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Frame = -1
Query: 212 LDLWHRRLGHPFDKVIRSLPFISST--SHLSNKACIVCHQAKHTWDSFVTSEHKTTSCFD 39
+D+WH+RLGHP +KV+R LP +S + S + C VC +A S S+++ + F+
Sbjct: 140 IDIWHKRLGHPSEKVLRHLPCVSPSDVSSCNKDGCDVCFRAHQLRTSIPRSKNRASRIFE 199
Query: 38 LIHCDLWGPYHT 3
L+HCDLWGPY T
Sbjct: 200 LVHCDLWGPYRT 211
Score = 58.2 bits (139), Expect(2) = 1e-22
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = -2
Query: 370 DYMNCVIQFTKNSCIIQDSISRTLIGAGERQDGLYYFCSVP 248
D NC++QFTK C++QD R LIGAGER+DGL++F VP
Sbjct: 87 DSANCIVQFTKTLCVLQDRRMRMLIGAGEREDGLFFFRGVP 127
>XP_010490134.1 PREDICTED: uncharacterized protein LOC104767865 [Camelina sativa]
Length = 721
Score = 85.5 bits (210), Expect(2) = 2e-22
Identities = 38/80 (47%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Frame = -1
Query: 239 TLHVTRKVPLDLWHRRLGHPFDKVIRSLPF--ISSTSHLSNKACIVCHQAKHTWDSFVTS 66
T+H+T+ +LWH+ LGHP K + SL +S +S +KAC +C++AK + D+F TS
Sbjct: 371 TMHITKVTSSELWHQPLGHPSSKDLESLSISDLSCSSKFDHKACDICNRAKQSRDTFPTS 430
Query: 65 EHKTTSCFDLIHCDLWGPYH 6
+KTTS F+L+HCDLWG H
Sbjct: 431 LNKTTSVFELVHCDLWGIIH 450
Score = 47.8 bits (112), Expect(2) = 2e-22
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = -2
Query: 358 CVIQFTKNSCIIQDSISRTLIGAGERQDGLYYFCSV 251
CV Q T C+IQD I+R LIG+GE+ +GLY+F S+
Sbjct: 331 CVFQITNTLCVIQDRITRMLIGSGEQHNGLYFFQSM 366
>KYP57918.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 391
Score = 77.8 bits (190), Expect(2) = 4e-22
Identities = 35/72 (48%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Frame = -1
Query: 212 LDLWHRRLGHPFDKVIRSLPFI--SSTSHLSNKACIVCHQAKHTWDSFVTSEHKTTSCFD 39
L++WH+RLGHP K + + + S TS + NKAC C +AK T ++F S ++ ++ FD
Sbjct: 117 LEVWHKRLGHPCWKTTQLILNVNGSRTSTVKNKACDTCQRAKQTRETFPLSNNQASNIFD 176
Query: 38 LIHCDLWGPYHT 3
LIHCDLWGPY T
Sbjct: 177 LIHCDLWGPYRT 188
Score = 54.3 bits (129), Expect(2) = 4e-22
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 8/51 (15%)
Frame = -2
Query: 370 DYMNCVIQFTKNSCIIQDSISRTLIGAGERQDGLYYF--------CSVPGV 242
D +NC +QF N C IQD S+ LIGAGER+DGLY+F C+V G+
Sbjct: 64 DELNCNVQFVGNMCAIQDRTSKMLIGAGERRDGLYFFREALMKKVCNVEGM 114
>CAN74847.1 hypothetical protein VITISV_028741 [Vitis vinifera]
Length = 1262
Score = 85.1 bits (209), Expect(2) = 1e-21
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = -1
Query: 212 LDLWHRRLGHPFDKVIRSLPFISSTSHLSNKACIVCHQAKHTWDSFVTSEHKTTSCFDLI 33
L+LWH+R+GHP +KV++ LP +S+ NKAC +C +AKH D F S++K T F+ I
Sbjct: 512 LELWHKRMGHPSEKVVKLLPPVSNLKGSLNKACEICFRAKHPRDKFSLSDNKATRIFEKI 571
Query: 32 HCDLWGPY 9
HCDLWG Y
Sbjct: 572 HCDLWGSY 579
Score = 45.4 bits (106), Expect(2) = 1e-21
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = -2
Query: 370 DYMNCVIQFTKNSCIIQDSISRTLIGAGERQDGLYYFCSVPG 245
D ++C++QF C IQD +R LIG G R+DGLYYF G
Sbjct: 457 DDLHCIVQFNSYMCAIQDH-TRELIGTGVRRDGLYYFGGAEG 497
>CAN73272.1 hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 85.1 bits (209), Expect(2) = 1e-21
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = -1
Query: 212 LDLWHRRLGHPFDKVIRSLPFISSTSHLSNKACIVCHQAKHTWDSFVTSEHKTTSCFDLI 33
L+LWH+R+GHP +KV++ LP +S+ NKAC +C +AKH D F S++K T F+ I
Sbjct: 266 LELWHKRMGHPSEKVVKLLPPVSNLKGSLNKACEICFRAKHXRDKFPLSDNKATRIFEKI 325
Query: 32 HCDLWGPY 9
HCDLWG Y
Sbjct: 326 HCDLWGSY 333
Score = 45.4 bits (106), Expect(2) = 1e-21
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = -2
Query: 370 DYMNCVIQFTKNSCIIQDSISRTLIGAGERQDGLYYFCSVPG 245
D ++C++QF C IQD +R LIG G R+DGLYYF G
Sbjct: 211 DDLHCIVQFNSYMCAIQDH-TRELIGTGVRRDGLYYFGGAEG 251
>CAN83015.1 hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 85.1 bits (209), Expect(2) = 1e-21
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = -1
Query: 212 LDLWHRRLGHPFDKVIRSLPFISSTSHLSNKACIVCHQAKHTWDSFVTSEHKTTSCFDLI 33
L+LWH+R+GHP +KV++ LP +S+ NKAC +C +AKH D F S++K T F+ I
Sbjct: 180 LELWHKRMGHPSEKVVKLLPPVSNLKGSLNKACEICFRAKHPRDKFPLSDNKATRIFEKI 239
Query: 32 HCDLWGPY 9
HCDLWG Y
Sbjct: 240 HCDLWGSY 247
Score = 45.4 bits (106), Expect(2) = 1e-21
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = -2
Query: 370 DYMNCVIQFTKNSCIIQDSISRTLIGAGERQDGLYYFCSVPG 245
D ++C++QF C IQD +R LIG G R+DGLYYF G
Sbjct: 125 DDLHCIVQFNSYMCAIQDH-TRELIGTGVRRDGLYYFGGAEG 165
>KYP64173.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 814
Score = 80.5 bits (197), Expect(2) = 1e-21
Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Frame = -1
Query: 209 DLWHRRLGHPFDKVIRSLPFISSTSHL-SNKACIVCHQAKHTWDSFVTSEHKTTSCFDLI 33
DLWH+R+GHP K+ + + S+ +++ NKAC VC +AK T +SF S K +S F+LI
Sbjct: 451 DLWHKRMGHPSLKITQMISNGSNKNNMIGNKACDVCQRAKQTRESFPLSNRKASSSFELI 510
Query: 32 HCDLWGPYHT 3
HCDLWGPY T
Sbjct: 511 HCDLWGPYRT 520
Score = 49.7 bits (117), Expect(2) = 1e-21
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = -2
Query: 370 DYMNCVIQFTKNSCIIQDSISRTLIGAGERQDGLYYF 260
D NCV+QFT + C++QD R LI GER++GLYYF
Sbjct: 397 DDANCVVQFTNSLCVMQDRTLRMLIRVGERRNGLYYF 433
>CAN80919.1 hypothetical protein VITISV_002640 [Vitis vinifera]
Length = 1450
Score = 84.0 bits (206), Expect(2) = 2e-21
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = -1
Query: 212 LDLWHRRLGHPFDKVIRSLPFISSTSHLSNKACIVCHQAKHTWDSFVTSEHKTTSCFDLI 33
L+LWH+R+GHP +KV++ LP +S+ NKAC +C +AKH D F +++K T F+ I
Sbjct: 513 LELWHKRMGHPSEKVVKLLPPVSNLKGSLNKACEICFRAKHPRDKFPLTDNKATRIFEKI 572
Query: 32 HCDLWGPY 9
HCDLWG Y
Sbjct: 573 HCDLWGSY 580
Score = 45.4 bits (106), Expect(2) = 2e-21
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = -2
Query: 370 DYMNCVIQFTKNSCIIQDSISRTLIGAGERQDGLYYFCSVPG 245
D ++C++QF C IQD +R LIG G R+DGLYYF G
Sbjct: 458 DDLHCIVQFNSYMCAIQDH-TRELIGTGVRRDGLYYFGGAEG 498
>CAN82171.1 hypothetical protein VITISV_040546 [Vitis vinifera]
Length = 1129
Score = 83.6 bits (205), Expect(2) = 3e-21
Identities = 34/68 (50%), Positives = 46/68 (67%)
Frame = -1
Query: 212 LDLWHRRLGHPFDKVIRSLPFISSTSHLSNKACIVCHQAKHTWDSFVTSEHKTTSCFDLI 33
L+LWH R+GHP +KV++ LP +S+ NKAC +C +AKH D F S++K T F+ I
Sbjct: 261 LELWHNRMGHPSEKVVKLLPLVSNIKGSLNKACEICFRAKHPRDKFPLSDNKATRIFEKI 320
Query: 32 HCDLWGPY 9
HCDLW Y
Sbjct: 321 HCDLWASY 328
Score = 45.4 bits (106), Expect(2) = 3e-21
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = -2
Query: 370 DYMNCVIQFTKNSCIIQDSISRTLIGAGERQDGLYYFCSVPG 245
D ++C++QF C IQD +R LIG G R+DGLYYF G
Sbjct: 206 DDLHCIVQFNSYMCAIQDH-TRELIGTGVRRDGLYYFGGAEG 246
>XP_019085390.1 PREDICTED: uncharacterized protein LOC109126341 [Camelina sativa]
Length = 629
Score = 84.0 bits (206), Expect(2) = 4e-21
Identities = 38/74 (51%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Frame = -1
Query: 215 PLDLWHRRLGHPFDKVIRSLPFISSTSH---LSNKACIVCHQAKHTWDSFVTSEHKTTSC 45
P D+WHRRLGHP + + F S+S +K C VC ++K T DSF S +KT+S
Sbjct: 514 PKDVWHRRLGHPSSTTMELMQFSDSSSSSNVFDSKTCDVCIRSKQTRDSFPLSNNKTSSV 573
Query: 44 FDLIHCDLWGPYHT 3
FDL+HCDLWGPY T
Sbjct: 574 FDLVHCDLWGPYRT 587
Score = 44.7 bits (104), Expect(2) = 4e-21
Identities = 16/34 (47%), Positives = 27/34 (79%)
Frame = -2
Query: 361 NCVIQFTKNSCIIQDSISRTLIGAGERQDGLYYF 260
+C+ Q + CI+QD I++T+IGAGE+ +GLY++
Sbjct: 465 SCIFQISDKICIVQDRITQTVIGAGEQDNGLYFY 498
>XP_010274487.1 PREDICTED: uncharacterized protein LOC104609798 [Nelumbo nucifera]
Length = 569
Score = 81.3 bits (199), Expect(2) = 4e-21
Identities = 35/71 (49%), Positives = 47/71 (66%)
Frame = -1
Query: 221 KVPLDLWHRRLGHPFDKVIRSLPFISSTSHLSNKACIVCHQAKHTWDSFVTSEHKTTSCF 42
K +LWH+R+GHP +KVI+ LP ++ N+ C VC +AK T +F +SE+ F
Sbjct: 429 KASYELWHKRIGHPSEKVIKFLPDLNIRGGSGNRICGVCLKAKQTRGTFDSSENNAKKIF 488
Query: 41 DLIHCDLWGPY 9
DLIHCDLWGPY
Sbjct: 489 DLIHCDLWGPY 499
Score = 47.4 bits (111), Expect(2) = 4e-21
Identities = 20/34 (58%), Positives = 24/34 (70%)
Frame = -2
Query: 361 NCVIQFTKNSCIIQDSISRTLIGAGERQDGLYYF 260
NC IQ T C++QD SR IGAGE ++GLYYF
Sbjct: 382 NCNIQITNKFCVVQDRTSRMAIGAGELREGLYYF 415
>BAA97287.1 retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 82.0 bits (201), Expect(2) = 7e-21
Identities = 36/67 (53%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Frame = -1
Query: 206 LWHRRLGHPFDKVIRSLPFISSTS-HLSNKACIVCHQAKHTWDSFVTSEHKTTSCFDLIH 30
LWH+RLGHP V+ SLP S +S +S+++C VC +AK T + F S +K+T CF LIH
Sbjct: 512 LWHQRLGHPSFSVLSSLPLFSGSSCSVSSRSCDVCFRAKQTREVFPDSSNKSTDCFSLIH 571
Query: 29 CDLWGPY 9
CD+WGPY
Sbjct: 572 CDVWGPY 578
Score = 45.8 bits (107), Expect(2) = 7e-21
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = -2
Query: 364 MNCVIQFTKNSCIIQDSISRTLIGAGERQDGLYY 263
+ C+ FT C++QD SRTLIG GE +DG+YY
Sbjct: 459 IKCLALFTDTICVLQDRFSRTLIGTGEERDGVYY 492
>AAC67205.1 putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 82.0 bits (201), Expect(2) = 7e-21
Identities = 36/67 (53%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Frame = -1
Query: 206 LWHRRLGHPFDKVIRSLPFISSTS-HLSNKACIVCHQAKHTWDSFVTSEHKTTSCFDLIH 30
LWH+RLGHP V+ SLP S +S +S+++C VC +AK T + F S +K+T CF LIH
Sbjct: 512 LWHQRLGHPSFSVLSSLPLFSGSSCSVSSRSCDVCFRAKQTREVFPDSSNKSTDCFSLIH 571
Query: 29 CDLWGPY 9
CD+WGPY
Sbjct: 572 CDVWGPY 578
Score = 45.8 bits (107), Expect(2) = 7e-21
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = -2
Query: 364 MNCVIQFTKNSCIIQDSISRTLIGAGERQDGLYY 263
+ C+ FT C++QD SRTLIG GE +DG+YY
Sbjct: 459 IKCLALFTDTICVLQDRFSRTLIGTGEERDGVYY 492
>XP_010674610.1 PREDICTED: uncharacterized protein LOC104890733 [Beta vulgaris
subsp. vulgaris]
Length = 585
Score = 83.6 bits (205), Expect(2) = 9e-21
Identities = 34/67 (50%), Positives = 47/67 (70%)
Frame = -1
Query: 209 DLWHRRLGHPFDKVIRSLPFISSTSHLSNKACIVCHQAKHTWDSFVTSEHKTTSCFDLIH 30
+LWHRR+GHP +KV++ LP + NKAC +C +AKH+ D F S++K + F+ IH
Sbjct: 433 ELWHRRMGHPSEKVVKLLPPLCGHRGSLNKACEICFRAKHSRDKFPLSDNKASRIFEKIH 492
Query: 29 CDLWGPY 9
CDLWGPY
Sbjct: 493 CDLWGPY 499
Score = 43.9 bits (102), Expect(2) = 9e-21
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = -2
Query: 364 MNCVIQFTKNSCIIQDSISRTLIGAGERQDGLYYF 260
+ C +QF + C IQD + R LIG G R+DGLYYF
Sbjct: 381 LQCFVQFNSSMCAIQDRM-RELIGTGRREDGLYYF 414
>KYP32861.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 997
Score = 72.8 bits (177), Expect(2) = 1e-20
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Frame = -1
Query: 212 LDLWHRRLGHPFDKVIRSLPFISST--SHLSNKACIVCHQAKHTWDSFVTSEHKTTSCFD 39
L++WH+RLGHP K + + ++ + S + NK C C +AK T ++F S ++ + FD
Sbjct: 249 LEVWHKRLGHPCWKTTQLIFNVNGSRISTIKNKVCDTCQRAKQTRETFPLSNNQAFNIFD 308
Query: 38 LIHCDLWGPYHT 3
LIHCDLWGPY T
Sbjct: 309 LIHCDLWGPYRT 320
Score = 54.3 bits (129), Expect(2) = 1e-20
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 8/51 (15%)
Frame = -2
Query: 370 DYMNCVIQFTKNSCIIQDSISRTLIGAGERQDGLYYF--------CSVPGV 242
D +NC +QF N C IQD S+ LIGAGER+DGLY+F C+V G+
Sbjct: 196 DELNCNVQFVGNMCAIQDRTSKMLIGAGERRDGLYFFRETLMKKVCNVEGM 246
>BAA97099.1 retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1098
Score = 79.0 bits (193), Expect(2) = 1e-20
Identities = 38/70 (54%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Frame = -1
Query: 206 LWHRRLGHPFDKVIRSLP-FISSTSHLSN-KACIVCHQAKHTWDSFVTSEHKTTSCFDLI 33
LWH RLGHP V+ S P F SS+S L K+C +C++AK + F S +KTT CF+LI
Sbjct: 504 LWHHRLGHPSTGVLLSFPEFASSSSDLEIIKSCDICYRAKQAREVFSPSLNKTTVCFELI 563
Query: 32 HCDLWGPYHT 3
HCD+WGPY T
Sbjct: 564 HCDVWGPYRT 573
Score = 47.8 bits (112), Expect(2) = 1e-20
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = -2
Query: 367 YMNCVIQFTKNSCIIQDSISRTLIGAGERQDGLYYFCSV 251
+ CV FT C +QD +RTLIGAGE ++G+YYF V
Sbjct: 449 HTGCVAIFTDTLCFLQDRFTRTLIGAGEEREGVYYFTGV 487