BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00030473
         (222 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EEF46504.1 pentatricopeptide repeat-containing protein, putative...    93   2e-20
XP_015572763.1 PREDICTED: pentatricopeptide repeat-containing pr...    93   2e-20
GAV66848.1 PPR domain-containing protein/PPR_2 domain-containing...    92   3e-20
XP_006432816.1 hypothetical protein CICLE_v100004881mg, partial ...    84   8e-20
KDO53133.1 hypothetical protein CISIN_1g0032732mg, partial [Citr...    88   2e-19
XP_012066313.1 PREDICTED: pentatricopeptide repeat-containing pr...    89   5e-19
XP_016564046.1 PREDICTED: pentatricopeptide repeat-containing pr...    89   7e-19
CBI40338.3 unnamed protein product, partial [Vitis vinifera]           88   1e-18
XP_006471568.1 PREDICTED: pentatricopeptide repeat-containing pr...    88   1e-18
XP_010661762.2 PREDICTED: pentatricopeptide repeat-containing pr...    88   1e-18
CAN79811.1 hypothetical protein VITISV_018821 [Vitis vinifera]         88   1e-18
OAY52024.1 hypothetical protein MANES_04G051200 [Manihot esculenta]    87   2e-18
XP_010261411.1 PREDICTED: pentatricopeptide repeat-containing pr...    86   6e-18
XP_009591690.1 PREDICTED: pentatricopeptide repeat-containing pr...    86   9e-18
XP_018859432.1 PREDICTED: pentatricopeptide repeat-containing pr...    86   9e-18
XP_016483871.1 PREDICTED: pentatricopeptide repeat-containing pr...    85   2e-17
OMO77537.1 hypothetical protein COLO4_25105 [Corchorus olitorius]      85   2e-17
XP_008455181.1 PREDICTED: pentatricopeptide repeat-containing pr...    85   2e-17
XP_002318314.2 hypothetical protein POPTR_0012s03810g [Populus t...    84   2e-17
XP_010069456.1 PREDICTED: pentatricopeptide repeat-containing pr...    84   2e-17

>EEF46504.1 pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 655

 Score = 92.8 bits (229), Expect = 2e-20
 Identities = 44/77 (57%), Positives = 55/77 (71%), Gaps = 6/77 (7%)
 Frame = -1

Query: 222 ISIFITMRKLGWQPDGYTYPYVLKASGELPCFFLGASVHGLLVFSGFDWNVFVCNAVVAM 43
           +S+F TMR+L W PD YT+P+V KA GELP F  G+ +H ++  +GFD NVFVCNAVVAM
Sbjct: 124 LSLFRTMRRLNWSPDHYTFPFVFKACGELPSFLHGSCIHAIVCSTGFDSNVFVCNAVVAM 183

Query: 42  Y------VLARQMFDEM 10
           Y        ARQMFDE+
Sbjct: 184 YGRCGASSYARQMFDEL 200


>XP_015572763.1 PREDICTED: pentatricopeptide repeat-containing protein At5g16860
           [Ricinus communis]
          Length = 868

 Score = 92.8 bits (229), Expect = 2e-20
 Identities = 44/77 (57%), Positives = 55/77 (71%), Gaps = 6/77 (7%)
 Frame = -1

Query: 222 ISIFITMRKLGWQPDGYTYPYVLKASGELPCFFLGASVHGLLVFSGFDWNVFVCNAVVAM 43
           +S+F TMR+L W PD YT+P+V KA GELP F  G+ +H ++  +GFD NVFVCNAVVAM
Sbjct: 124 LSLFRTMRRLNWSPDHYTFPFVFKACGELPSFLHGSCIHAIVCSTGFDSNVFVCNAVVAM 183

Query: 42  Y------VLARQMFDEM 10
           Y        ARQMFDE+
Sbjct: 184 YGRCGASSYARQMFDEL 200


>GAV66848.1 PPR domain-containing protein/PPR_2 domain-containing protein/PPR_3
           domain-containing protein/DYW_deaminase
           domain-containing protein [Cephalotus follicularis]
          Length = 852

 Score = 92.4 bits (228), Expect = 3e-20
 Identities = 44/77 (57%), Positives = 57/77 (74%), Gaps = 6/77 (7%)
 Frame = -1

Query: 222 ISIFITMRKLGWQPDGYTYPYVLKASGELPCFFLGASVHGLLVFSGFDWNVFVCNAVVAM 43
           +++F TM++ GW+PD YT+P+VLKA GELP +  G SVH ++  +GF+ NVFVCNAVVAM
Sbjct: 111 LALFATMKRRGWRPDNYTFPFVLKACGELPSYKRGGSVHAVVCSNGFESNVFVCNAVVAM 170

Query: 42  YVL------ARQMFDEM 10
           Y        ARQMFDEM
Sbjct: 171 YGRCGALDDARQMFDEM 187


>XP_006432816.1 hypothetical protein CICLE_v100004881mg, partial [Citrus
           clementina] ESR46056.1 hypothetical protein
           CICLE_v100004881mg, partial [Citrus clementina]
          Length = 85

 Score = 84.3 bits (207), Expect = 8e-20
 Identities = 41/71 (57%), Positives = 50/71 (70%), Gaps = 6/71 (8%)
 Frame = -1

Query: 204 MRKLGWQPDGYTYPYVLKASGELPCFFLGASVHGLLVFSGFDWNVFVCNAVVAMYV---- 37
           M + GW PD YT+P+VLKA GELP    G+SVH ++  SGFD NVFVCNA++AMY     
Sbjct: 1   MMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHAVICSSGFDSNVFVCNALMAMYARCDT 60

Query: 36  --LARQMFDEM 10
              ARQ+FDEM
Sbjct: 61  LSYARQLFDEM 71


>KDO53133.1 hypothetical protein CISIN_1g0032732mg, partial [Citrus sinensis]
          Length = 261

 Score = 87.8 bits (216), Expect = 2e-19
 Identities = 42/75 (56%), Positives = 53/75 (70%), Gaps = 6/75 (8%)
 Frame = -1

Query: 216 IFITMRKLGWQPDGYTYPYVLKASGELPCFFLGASVHGLLVFSGFDWNVFVCNAVVAMYV 37
           +F+ M + GW PD YT+P+VLKA GELP    G+SVH ++  SGFD NVFVCNA++AMY 
Sbjct: 122 LFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHAVICSSGFDSNVFVCNALMAMYA 181

Query: 36  ------LARQMFDEM 10
                  ARQ+FDEM
Sbjct: 182 RCDTLSYARQLFDEM 196


>XP_012066313.1 PREDICTED: pentatricopeptide repeat-containing protein At5g16860
           [Jatropha curcas] KDP42927.1 hypothetical protein
           JCGZ_23869 [Jatropha curcas]
          Length = 853

 Score = 89.0 bits (219), Expect = 5e-19
 Identities = 45/77 (58%), Positives = 54/77 (70%), Gaps = 6/77 (7%)
 Frame = -1

Query: 222 ISIFITMRKLGWQPDGYTYPYVLKASGELPCFFLGASVHGLLVFSGFDWNVFVCNAVVAM 43
           +S+F  M +LGW PD YTYP+V KA GELP F  G+SVH ++  +GF+ NVFVCNAVV M
Sbjct: 111 LSLFRRMLRLGWSPDQYTYPFVFKACGELPSFRHGSSVHAVVWSNGFESNVFVCNAVVTM 170

Query: 42  YVL------ARQMFDEM 10
           Y        ARQMFDEM
Sbjct: 171 YGRCGALDHARQMFDEM 187


>XP_016564046.1 PREDICTED: pentatricopeptide repeat-containing protein At5g16860
           [Capsicum annuum]
          Length = 835

 Score = 88.6 bits (218), Expect = 7e-19
 Identities = 45/74 (60%), Positives = 53/74 (71%), Gaps = 6/74 (8%)
 Frame = -1

Query: 216 IFITMRKLGWQPDGYTYPYVLKASGELPCFFLGASVHGLLVFSGFDWNVFVCNAVVAMY- 40
           +F  M +L W PDGYTYPYVLKA GEL   F G SVHG+++ SG + NVFVCN ++AMY 
Sbjct: 94  LFREMLRLDWNPDGYTYPYVLKACGELRYLFCGESVHGMILVSGLESNVFVCNGLIAMYG 153

Query: 39  ---VL--ARQMFDE 13
              VL  ARQMFDE
Sbjct: 154 KCGVLGYARQMFDE 167


>CBI40338.3 unnamed protein product, partial [Vitis vinifera]
          Length = 487

 Score = 87.8 bits (216), Expect = 1e-18
 Identities = 41/77 (53%), Positives = 56/77 (72%), Gaps = 6/77 (7%)
 Frame = -1

Query: 222 ISIFITMRKLGWQPDGYTYPYVLKASGELPCFFLGASVHGLLVFSGFDWNVFVCNAVVAM 43
           + ++  M++LGW+PD YT+P+VLKA GE+P F  GASVH ++  SGF+WNVFV N +V+M
Sbjct: 111 LQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSM 170

Query: 42  Y------VLARQMFDEM 10
           Y        ARQ+FDEM
Sbjct: 171 YGRCGAWENARQVFDEM 187


>XP_006471568.1 PREDICTED: pentatricopeptide repeat-containing protein At5g16860
           [Citrus sinensis]
          Length = 860

 Score = 87.8 bits (216), Expect = 1e-18
 Identities = 42/75 (56%), Positives = 53/75 (70%), Gaps = 6/75 (8%)
 Frame = -1

Query: 216 IFITMRKLGWQPDGYTYPYVLKASGELPCFFLGASVHGLLVFSGFDWNVFVCNAVVAMYV 37
           +F+ M + GW PD YT+P+VLKA GELP    G+SVH ++  SGFD NVFVCNA++AMY 
Sbjct: 122 LFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHAVICSSGFDSNVFVCNALMAMYA 181

Query: 36  ------LARQMFDEM 10
                  ARQ+FDEM
Sbjct: 182 RCDTLSYARQLFDEM 196


>XP_010661762.2 PREDICTED: pentatricopeptide repeat-containing protein At5g16860
           [Vitis vinifera] XP_010661763.2 PREDICTED:
           pentatricopeptide repeat-containing protein At5g16860
           [Vitis vinifera] XP_010661764.2 PREDICTED:
           pentatricopeptide repeat-containing protein At5g16860
           [Vitis vinifera] XP_010661765.2 PREDICTED:
           pentatricopeptide repeat-containing protein At5g16860
           [Vitis vinifera]
          Length = 871

 Score = 87.8 bits (216), Expect = 1e-18
 Identities = 41/77 (53%), Positives = 56/77 (72%), Gaps = 6/77 (7%)
 Frame = -1

Query: 222 ISIFITMRKLGWQPDGYTYPYVLKASGELPCFFLGASVHGLLVFSGFDWNVFVCNAVVAM 43
           + ++  M++LGW+PD YT+P+VLKA GE+P F  GASVH ++  SGF+WNVFV N +V+M
Sbjct: 130 LQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSM 189

Query: 42  Y------VLARQMFDEM 10
           Y        ARQ+FDEM
Sbjct: 190 YGRCGAWENARQVFDEM 206


>CAN79811.1 hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score = 87.8 bits (216), Expect = 1e-18
 Identities = 41/77 (53%), Positives = 56/77 (72%), Gaps = 6/77 (7%)
 Frame = -1

Query: 222 ISIFITMRKLGWQPDGYTYPYVLKASGELPCFFLGASVHGLLVFSGFDWNVFVCNAVVAM 43
           + ++  M++LGW+PD YT+P+VLKA GE+P F  GASVH ++  SGF+WNVFV N +V+M
Sbjct: 130 LQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSM 189

Query: 42  Y------VLARQMFDEM 10
           Y        ARQ+FDEM
Sbjct: 190 YGRCGAWENARQVFDEM 206


>OAY52024.1 hypothetical protein MANES_04G051200 [Manihot esculenta]
          Length = 850

 Score = 87.4 bits (215), Expect = 2e-18
 Identities = 43/77 (55%), Positives = 53/77 (68%), Gaps = 6/77 (7%)
 Frame = -1

Query: 222 ISIFITMRKLGWQPDGYTYPYVLKASGELPCFFLGASVHGLLVFSGFDWNVFVCNAVVAM 43
           +S+F  M  LGW PD YT+P+V KA GELP F  G+S+H ++  +GF+ NVFVCNAVV M
Sbjct: 109 VSLFCRMLSLGWSPDHYTFPFVFKACGELPSFRHGSSLHAVVCSNGFESNVFVCNAVVTM 168

Query: 42  YVL------ARQMFDEM 10
           Y        ARQMFDEM
Sbjct: 169 YGRCGALNHARQMFDEM 185


>XP_010261411.1 PREDICTED: pentatricopeptide repeat-containing protein At5g16860
           [Nelumbo nucifera]
          Length = 857

 Score = 85.9 bits (211), Expect = 6e-18
 Identities = 41/78 (52%), Positives = 56/78 (71%), Gaps = 6/78 (7%)
 Frame = -1

Query: 222 ISIFITMRKLGWQPDGYTYPYVLKASGELPCFFLGASVHGLLVFSGFDWNVFVCNAVVAM 43
           + +F  M +LGW+PD YTYP+V+KA G+LP F  GA++H  +  +GF+ NVFVCNA+VAM
Sbjct: 116 LHLFRRMLRLGWKPDQYTYPFVIKACGDLPSFRRGAALHAFVCGNGFESNVFVCNALVAM 175

Query: 42  YVL------ARQMFDEMT 7
           Y        ARQ+FDE+T
Sbjct: 176 YSRCGALEEARQVFDEVT 193


>XP_009591690.1 PREDICTED: pentatricopeptide repeat-containing protein At5g16860
           [Nicotiana tomentosiformis] XP_009591691.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g16860
           [Nicotiana tomentosiformis]
          Length = 843

 Score = 85.5 bits (210), Expect = 9e-18
 Identities = 42/76 (55%), Positives = 50/76 (65%), Gaps = 6/76 (7%)
 Frame = -1

Query: 222 ISIFITMRKLGWQPDGYTYPYVLKASGELPCFFLGASVHGLLVFSGFDWNVFVCNAVVAM 43
           +++F  M +L W PDGYTYPYVLKA GEL     G SVH L++ SG D NVFVCN ++AM
Sbjct: 100 LALFREMLRLNWNPDGYTYPYVLKACGELQSLLCGESVHALILISGLDSNVFVCNGLIAM 159

Query: 42  YVL------ARQMFDE 13
           Y        ARQ FDE
Sbjct: 160 YGKCGMLGHARQEFDE 175


>XP_018859432.1 PREDICTED: pentatricopeptide repeat-containing protein At5g16860
           [Juglans regia]
          Length = 858

 Score = 85.5 bits (210), Expect = 9e-18
 Identities = 41/77 (53%), Positives = 59/77 (76%), Gaps = 6/77 (7%)
 Frame = -1

Query: 222 ISIFITMRKLGWQPDGYTYPYVLKASGELPCFFLGASVHGLLVFSGFDWNVFVCNAVVAM 43
           + ++  M++LGW+PD YT+P+VLKA GELP +  GASVH ++  +GFD NVF+CNAVVAM
Sbjct: 117 LGLYRKMQRLGWRPDHYTFPFVLKACGELPSYRRGASVHAVVFANGFDSNVFICNAVVAM 176

Query: 42  Y----VL--ARQMFDEM 10
           Y    VL  AR++F+++
Sbjct: 177 YGRCGVLDGARRVFEDL 193


>XP_016483871.1 PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Nicotiana tabacum] XP_016483872.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Nicotiana tabacum]
          Length = 843

 Score = 84.7 bits (208), Expect = 2e-17
 Identities = 42/76 (55%), Positives = 50/76 (65%), Gaps = 6/76 (7%)
 Frame = -1

Query: 222 ISIFITMRKLGWQPDGYTYPYVLKASGELPCFFLGASVHGLLVFSGFDWNVFVCNAVVAM 43
           +++F  M +L W PDGYTYPYVLKA GEL     G SVH L++ SG D NVFVCN ++AM
Sbjct: 100 LALFREMLRLNWNPDGYTYPYVLKACGELQSLLCGESVHALILTSGLDSNVFVCNGLIAM 159

Query: 42  YVL------ARQMFDE 13
           Y        ARQ FDE
Sbjct: 160 YGKCGMLGHARQEFDE 175


>OMO77537.1 hypothetical protein COLO4_25105 [Corchorus olitorius]
          Length = 851

 Score = 84.7 bits (208), Expect = 2e-17
 Identities = 42/77 (54%), Positives = 53/77 (68%), Gaps = 6/77 (7%)
 Frame = -1

Query: 222 ISIFITMRKLGWQPDGYTYPYVLKASGELPCFFLGASVHGLLVFSGFDWNVFVCNAVVAM 43
           +++F TM  LG+ PD YT+P+VLKA G LP FF G++VH  +  +G D +VFVCNAVV M
Sbjct: 110 LTLFRTMLTLGYSPDHYTFPFVLKACGHLPSFFRGSAVHATVFTTGLDSDVFVCNAVVGM 169

Query: 42  YVL------ARQMFDEM 10
           Y        ARQMFDEM
Sbjct: 170 YARCGGLDEARQMFDEM 186


>XP_008455181.1 PREDICTED: pentatricopeptide repeat-containing protein At5g16860
           [Cucumis melo] XP_008455182.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g16860
           [Cucumis melo] XP_008455183.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g16860
           [Cucumis melo] XP_008455184.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g16860
           [Cucumis melo] XP_008455185.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g16860
           [Cucumis melo] XP_008455186.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g16860
           [Cucumis melo] XP_008455189.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g16860
           [Cucumis melo] XP_016901762.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g16860
           [Cucumis melo]
          Length = 868

 Score = 84.7 bits (208), Expect = 2e-17
 Identities = 40/77 (51%), Positives = 53/77 (68%), Gaps = 6/77 (7%)
 Frame = -1

Query: 222 ISIFITMRKLGWQPDGYTYPYVLKASGELPCFFLGASVHGLLVFSGFDWNVFVCNAVVAM 43
           +  +  M+ LGW PD YT+P+VLKA GE+P F  GASVH ++   GF+ NVF+CN++VAM
Sbjct: 125 LGFYCQMQSLGWLPDHYTFPFVLKACGEIPSFRHGASVHAVVCAKGFESNVFICNSIVAM 184

Query: 42  YVL------ARQMFDEM 10
           Y        ARQMFDE+
Sbjct: 185 YGRCGALDDARQMFDEV 201


>XP_002318314.2 hypothetical protein POPTR_0012s03810g [Populus trichocarpa]
           EEE96534.2 hypothetical protein POPTR_0012s03810g
           [Populus trichocarpa]
          Length = 643

 Score = 84.3 bits (207), Expect = 2e-17
 Identities = 40/71 (56%), Positives = 51/71 (71%), Gaps = 6/71 (8%)
 Frame = -1

Query: 204 MRKLGWQPDGYTYPYVLKASGELPCFFLGASVHGLLVFSGFDWNVFVCNAVVAMY----- 40
           M +LGW PD YT+P V KA G+L C  LGAS+HG++  +GF+ NVFVCNA+VAMY     
Sbjct: 1   MWRLGWTPDNYTFPLVFKACGDLMCCRLGASIHGVVFLTGFESNVFVCNAIVAMYGRCGE 60

Query: 39  -VLARQMFDEM 10
              AR++FDEM
Sbjct: 61  LDCARKLFDEM 71


>XP_010069456.1 PREDICTED: pentatricopeptide repeat-containing protein At5g16860
           [Eucalyptus grandis]
          Length = 867

 Score = 84.3 bits (207), Expect = 2e-17
 Identities = 41/78 (52%), Positives = 55/78 (70%), Gaps = 6/78 (7%)
 Frame = -1

Query: 222 ISIFITMRKLGWQPDGYTYPYVLKASGELPCFFLGASVHGLLVFSGFDWNVFVCNAVVAM 43
           +  F  M++LGW+PD +T+P+VLKA GELP F  GASVH  +  +GF+ NVFVCNA VAM
Sbjct: 126 LGYFRRMQRLGWRPDHFTFPFVLKACGELPSFRRGASVHAAVCANGFEGNVFVCNAAVAM 185

Query: 42  YVL------ARQMFDEMT 7
           Y        AR++FDE++
Sbjct: 186 YGRCGALDDARKVFDELS 203