BLASTX nr result
ID: Lithospermum23_contig00029629
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00029629
(323 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
JAV01726.1 Retrovirus-related Pol polyprotein from transposon TN... 102 2e-25
OIT18886.1 hypothetical protein A4A49_55982, partial [Nicotiana ... 97 3e-24
OIT22900.1 hypothetical protein A4A49_59464, partial [Nicotiana ... 97 4e-24
AAC26250.1 contains similarity to reverse transcriptase (Pfam: r... 100 4e-24
BAA22288.1 polyprotein [Oryza australiensis] 98 9e-24
OIT26836.1 hypothetical protein A4A49_58155, partial [Nicotiana ... 96 1e-23
OIT08998.1 hypothetical protein A4A49_58182, partial [Nicotiana ... 96 1e-23
OIT19141.1 hypothetical protein A4A49_57918, partial [Nicotiana ... 95 1e-23
OIT21681.1 hypothetical protein A4A49_58878, partial [Nicotiana ... 95 2e-23
OAP05046.1 hypothetical protein AXX17_AT3G36250 [Arabidopsis tha... 96 3e-23
OIT29048.1 hypothetical protein A4A49_58081, partial [Nicotiana ... 94 4e-23
OIT19246.1 hypothetical protein A4A49_57942, partial [Nicotiana ... 94 4e-23
ADB85430.1 putative retrotransposon protein [Phyllostachys edulis] 97 4e-23
OIT34752.1 hypothetical protein A4A49_63793, partial [Nicotiana ... 93 9e-23
OIT21635.1 hypothetical protein A4A49_63973, partial [Nicotiana ... 93 9e-23
OAO89438.1 hypothetical protein AXX17_ATUG00590 [Arabidopsis tha... 96 1e-22
KYP68473.1 Retrovirus-related Pol polyprotein from transposon TN... 93 1e-22
OIT20400.1 hypothetical protein A4A49_59693, partial [Nicotiana ... 93 1e-22
ABF97047.1 retrotransposon protein, putative, Ty1-copia subclass... 94 1e-22
AAP44605.1 putative polyprotein [Oryza sativa Japonica Group] 94 1e-22
>JAV01726.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 243
Score = 102 bits (255), Expect(2) = 2e-25
Identities = 46/83 (55%), Positives = 65/83 (78%)
Frame = -3
Query: 249 KRSLLDMKFVTELGVVPSTEGSVELLCDNTSAISQAKEP*ADHKSKNVPSKYHLIRDMLN 70
K ++ KFVTELGV+PS G V+L CDN AI+QAKEP + KSK++ +YHLIRD+++
Sbjct: 142 KEAVWIRKFVTELGVIPSISGPVDLYCDNNGAIAQAKEPRSHQKSKHIERRYHLIRDIVD 201
Query: 69 RGNIKVCKVATEANIDDPFTKPL 1
RG++K+ +V+T+AN+ DP TKPL
Sbjct: 202 RGDVKISRVSTDANVADPLTKPL 224
Score = 40.4 bits (93), Expect(2) = 2e-25
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = -1
Query: 320 RSFKYCTESDSTTESEYIATLDAAKEACWI 231
+S K T +DSTTE+EYIA +AAKEA WI
Sbjct: 118 KSSKQSTVADSTTEAEYIAASEAAKEAVWI 147
>OIT18886.1 hypothetical protein A4A49_55982, partial [Nicotiana attenuata]
Length = 85
Score = 97.1 bits (240), Expect = 3e-24
Identities = 47/76 (61%), Positives = 60/76 (78%)
Frame = -3
Query: 228 KFVTELGVVPSTEGSVELLCDNTSAISQAKEP*ADHKSKNVPSKYHLIRDMLNRGNIKVC 49
KF+TELGVVPS EG+V LLCDNT AI+QAKEP + KSK+V +YHLIR+M+ RG++++
Sbjct: 1 KFLTELGVVPSIEGAVPLLCDNTGAIAQAKEPRSHQKSKHVLRRYHLIREMIERGDVEIQ 60
Query: 48 KVATEANIDDPFTKPL 1
KV + N DPFTK L
Sbjct: 61 KVDGKENAADPFTKAL 76
>OIT22900.1 hypothetical protein A4A49_59464, partial [Nicotiana attenuata]
Length = 85
Score = 96.7 bits (239), Expect = 4e-24
Identities = 45/76 (59%), Positives = 61/76 (80%)
Frame = -3
Query: 228 KFVTELGVVPSTEGSVELLCDNTSAISQAKEP*ADHKSKNVPSKYHLIRDMLNRGNIKVC 49
KF+TELGVVPS EG+V LLCDNT A++QAKEP + KSK+V +YHLIR+++ RG++++
Sbjct: 1 KFLTELGVVPSIEGAVPLLCDNTGAVAQAKEPRSHQKSKHVLRRYHLIREIIERGDVEIQ 60
Query: 48 KVATEANIDDPFTKPL 1
KV + N+ DPFTK L
Sbjct: 61 KVDGKENVADPFTKAL 76
>AAC26250.1 contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] CAB80804.1 putative
retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 99.8 bits (247), Expect(2) = 4e-24
Identities = 43/76 (56%), Positives = 62/76 (81%)
Frame = -3
Query: 228 KFVTELGVVPSTEGSVELLCDNTSAISQAKEP*ADHKSKNVPSKYHLIRDMLNRGNIKVC 49
KF+TELGVVPS G ++L CDN AI+QAKEP + KSK++ +YHLIR++++RG++K+
Sbjct: 870 KFITELGVVPSISGPIDLYCDNNGAIAQAKEPKSHQKSKHIQRRYHLIREIIDRGDVKIS 929
Query: 48 KVATEANIDDPFTKPL 1
+V+T+AN+ D FTKPL
Sbjct: 930 RVSTDANVADHFTKPL 945
Score = 38.9 bits (89), Expect(2) = 4e-24
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = -1
Query: 320 RSFKYCTESDSTTESEYIATLDAAKEACWI 231
+S K T +DSTTE+EYIA +AAKE WI
Sbjct: 839 KSTKQSTVADSTTEAEYIAASEAAKEVVWI 868
>BAA22288.1 polyprotein [Oryza australiensis]
Length = 1317
Score = 97.8 bits (242), Expect(2) = 9e-24
Identities = 45/83 (54%), Positives = 64/83 (77%)
Frame = -3
Query: 249 KRSLLDMKFVTELGVVPSTEGSVELLCDNTSAISQAKEP*ADHKSKNVPSKYHLIRDMLN 70
K ++ KFV+ELGV+ ST G + L CDN+ AI+QAKEP + KSK++ +YHLIR++++
Sbjct: 1216 KEAVWIKKFVSELGVMTSTTGPMSLYCDNSGAIAQAKEPRSHQKSKHILRRYHLIREIVD 1275
Query: 69 RGNIKVCKVATEANIDDPFTKPL 1
RG++K+CKV T+ NI DP TKPL
Sbjct: 1276 RGDVKICKVHTDLNIADPLTKPL 1298
Score = 39.7 bits (91), Expect(2) = 9e-24
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = -1
Query: 320 RSFKYCTESDSTTESEYIATLDAAKEACWI 231
+S K T +DSTTE+EYIA +AAKEA WI
Sbjct: 1192 KSSKQDTVADSTTEAEYIAASEAAKEAVWI 1221
>OIT26836.1 hypothetical protein A4A49_58155, partial [Nicotiana attenuata]
Length = 85
Score = 95.5 bits (236), Expect = 1e-23
Identities = 45/76 (59%), Positives = 61/76 (80%)
Frame = -3
Query: 228 KFVTELGVVPSTEGSVELLCDNTSAISQAKEP*ADHKSKNVPSKYHLIRDMLNRGNIKVC 49
KF+TELGVVPS EG+V LLCDN+ AI+QAKEP + KSK+V +YHLIR+++ RG++++
Sbjct: 1 KFLTELGVVPSIEGAVPLLCDNSGAIAQAKEPRSHQKSKHVLRRYHLIREIIERGDVEIQ 60
Query: 48 KVATEANIDDPFTKPL 1
KV + N+ DPFTK L
Sbjct: 61 KVDGKENVADPFTKAL 76
>OIT08998.1 hypothetical protein A4A49_58182, partial [Nicotiana attenuata]
Length = 85
Score = 95.5 bits (236), Expect = 1e-23
Identities = 46/76 (60%), Positives = 60/76 (78%)
Frame = -3
Query: 228 KFVTELGVVPSTEGSVELLCDNTSAISQAKEP*ADHKSKNVPSKYHLIRDMLNRGNIKVC 49
KF+TELGVVPS EG+V LLCDNT AI+QAKEP + KSK+V +YHLIR+++ RG++++
Sbjct: 1 KFLTELGVVPSIEGAVPLLCDNTGAIAQAKEPRSHQKSKHVLRRYHLIREIIERGDVEIQ 60
Query: 48 KVATEANIDDPFTKPL 1
KV + N DPFTK L
Sbjct: 61 KVDGKENAADPFTKAL 76
>OIT19141.1 hypothetical protein A4A49_57918, partial [Nicotiana attenuata]
Length = 85
Score = 95.1 bits (235), Expect = 1e-23
Identities = 45/76 (59%), Positives = 60/76 (78%)
Frame = -3
Query: 228 KFVTELGVVPSTEGSVELLCDNTSAISQAKEP*ADHKSKNVPSKYHLIRDMLNRGNIKVC 49
KF+TELGVVPS EG+V LLCDN AI+QAKEP + KSK+V +YHLIR+++ RG++++
Sbjct: 1 KFLTELGVVPSIEGAVPLLCDNIGAIAQAKEPRSHQKSKHVLQRYHLIREIIERGDVEIQ 60
Query: 48 KVATEANIDDPFTKPL 1
KV + N+ DPFTK L
Sbjct: 61 KVDGKKNVADPFTKAL 76
>OIT21681.1 hypothetical protein A4A49_58878, partial [Nicotiana attenuata]
Length = 85
Score = 94.7 bits (234), Expect = 2e-23
Identities = 44/76 (57%), Positives = 60/76 (78%)
Frame = -3
Query: 228 KFVTELGVVPSTEGSVELLCDNTSAISQAKEP*ADHKSKNVPSKYHLIRDMLNRGNIKVC 49
KF+TELGVVPS EG+V LLCDNT AI+QAKEP + KSK++ +YHLIR+++ RG++++
Sbjct: 1 KFLTELGVVPSIEGAVPLLCDNTGAIAQAKEPRSHQKSKHILRRYHLIREIIQRGDVEIQ 60
Query: 48 KVATEANIDDPFTKPL 1
K+ + N DPFTK L
Sbjct: 61 KIDGKENAADPFTKAL 76
>OAP05046.1 hypothetical protein AXX17_AT3G36250 [Arabidopsis thaliana]
Length = 224
Score = 96.3 bits (238), Expect(2) = 3e-23
Identities = 42/76 (55%), Positives = 60/76 (78%)
Frame = -3
Query: 228 KFVTELGVVPSTEGSVELLCDNTSAISQAKEP*ADHKSKNVPSKYHLIRDMLNRGNIKVC 49
KF+ E+GV+PS G V+L CDN AI+QAKEP + KSK++ +YHLIRD+++RG++K+
Sbjct: 130 KFIAEIGVIPSISGLVDLYCDNNGAIAQAKEPRSHQKSKHILRRYHLIRDIVDRGDVKIR 189
Query: 48 KVATEANIDDPFTKPL 1
+V+T AN+ DP TKPL
Sbjct: 190 RVSTNANVVDPLTKPL 205
Score = 39.7 bits (91), Expect(2) = 3e-23
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = -1
Query: 320 RSFKYCTESDSTTESEYIATLDAAKEACWI 231
+SFK T +DSTTE EYI+ +AAKE WI
Sbjct: 99 KSFKQSTMADSTTEVEYISASEAAKEVVWI 128
>OIT29048.1 hypothetical protein A4A49_58081, partial [Nicotiana attenuata]
Length = 85
Score = 94.0 bits (232), Expect = 4e-23
Identities = 45/76 (59%), Positives = 60/76 (78%)
Frame = -3
Query: 228 KFVTELGVVPSTEGSVELLCDNTSAISQAKEP*ADHKSKNVPSKYHLIRDMLNRGNIKVC 49
KF+T+LGVVPS EG+V LLCDNT AI+QAKEP + KSK+V +YHLIR+++ RG++++
Sbjct: 1 KFLTKLGVVPSIEGAVPLLCDNTGAIAQAKEPRSHQKSKHVLRRYHLIREIIERGDVEIQ 60
Query: 48 KVATEANIDDPFTKPL 1
KV + N DPFTK L
Sbjct: 61 KVDGKENAADPFTKAL 76
>OIT19246.1 hypothetical protein A4A49_57942, partial [Nicotiana attenuata]
Length = 85
Score = 94.0 bits (232), Expect = 4e-23
Identities = 45/76 (59%), Positives = 60/76 (78%)
Frame = -3
Query: 228 KFVTELGVVPSTEGSVELLCDNTSAISQAKEP*ADHKSKNVPSKYHLIRDMLNRGNIKVC 49
+F+TELGVVPS EG+V LLCDNT AI+QAKEP + KSK+V +YHLIR+++ RG++++
Sbjct: 1 QFLTELGVVPSIEGAVPLLCDNTGAIAQAKEPRSHQKSKHVLRRYHLIREIIERGDVEIQ 60
Query: 48 KVATEANIDDPFTKPL 1
KV + N DPFTK L
Sbjct: 61 KVDGKENTADPFTKAL 76
>ADB85430.1 putative retrotransposon protein [Phyllostachys edulis]
Length = 896
Score = 96.7 bits (239), Expect(2) = 4e-23
Identities = 42/75 (56%), Positives = 59/75 (78%)
Frame = -3
Query: 225 FVTELGVVPSTEGSVELLCDNTSAISQAKEP*ADHKSKNVPSKYHLIRDMLNRGNIKVCK 46
F+TELG+VPS ++L CDN AI+QAKEP + KSK++ +YHLIR++++RG++K+CK
Sbjct: 804 FITELGMVPSASSPMDLYCDNNGAIAQAKEPRSHQKSKHILRRYHLIRELVDRGDVKICK 863
Query: 45 VATEANIDDPFTKPL 1
V T+ NI DP TKPL
Sbjct: 864 VHTDLNIADPLTKPL 878
Score = 38.5 bits (88), Expect(2) = 4e-23
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -1
Query: 320 RSFKYCTESDSTTESEYIATLDAAKEACWI*N 225
+S K T +DSTTE+EYIA +AAKE WI N
Sbjct: 772 KSSKQETVADSTTEAEYIAASEAAKEGVWIRN 803
>OIT34752.1 hypothetical protein A4A49_63793, partial [Nicotiana attenuata]
Length = 85
Score = 93.2 bits (230), Expect = 9e-23
Identities = 44/76 (57%), Positives = 59/76 (77%)
Frame = -3
Query: 228 KFVTELGVVPSTEGSVELLCDNTSAISQAKEP*ADHKSKNVPSKYHLIRDMLNRGNIKVC 49
KF+TELGV PS EG+V LLCDNT AI+QAKEP + K K+V +YHLIR+++ RG++++
Sbjct: 1 KFLTELGVAPSIEGAVPLLCDNTGAIAQAKEPRSHQKFKHVLRRYHLIREIIERGDVEIQ 60
Query: 48 KVATEANIDDPFTKPL 1
KV + N+ DPFTK L
Sbjct: 61 KVDGKENVADPFTKAL 76
>OIT21635.1 hypothetical protein A4A49_63973, partial [Nicotiana attenuata]
Length = 85
Score = 93.2 bits (230), Expect = 9e-23
Identities = 45/76 (59%), Positives = 59/76 (77%)
Frame = -3
Query: 228 KFVTELGVVPSTEGSVELLCDNTSAISQAKEP*ADHKSKNVPSKYHLIRDMLNRGNIKVC 49
KF+TELGVVPS EG+V LCDNT AI+QAKEP + KSK+V +YHLIR+++ RG++++
Sbjct: 1 KFLTELGVVPSIEGAVPSLCDNTGAIAQAKEPRSHQKSKHVLRRYHLIREIIERGDVEIQ 60
Query: 48 KVATEANIDDPFTKPL 1
KV + N DPFTK L
Sbjct: 61 KVDGKENAADPFTKAL 76
>OAO89438.1 hypothetical protein AXX17_ATUG00590 [Arabidopsis thaliana]
Length = 234
Score = 96.3 bits (238), Expect(2) = 1e-22
Identities = 43/76 (56%), Positives = 61/76 (80%)
Frame = -3
Query: 228 KFVTELGVVPSTEGSVELLCDNTSAISQAKEP*ADHKSKNVPSKYHLIRDMLNRGNIKVC 49
KF+TELGVVPS G V++ CDN AI+QAKEP + KSK++ +YHLI D+++RG++K+
Sbjct: 140 KFITELGVVPSICGPVDIYCDNNGAIAQAKEPRSHQKSKHILRRYHLICDIVDRGDVKIS 199
Query: 48 KVATEANIDDPFTKPL 1
+V+T+AN+ DP TKPL
Sbjct: 200 RVSTDANVADPLTKPL 215
Score = 37.7 bits (86), Expect(2) = 1e-22
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = -1
Query: 320 RSFKYCTESDSTTESEYIATLDAAKEACWI 231
+S K T +DSTTE+EYIA AAKE WI
Sbjct: 109 KSSKQSTMADSTTEAEYIAASKAAKEVVWI 138
>KYP68473.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 187
Score = 92.8 bits (229), Expect(2) = 1e-22
Identities = 44/83 (53%), Positives = 60/83 (72%)
Frame = -3
Query: 249 KRSLLDMKFVTELGVVPSTEGSVELLCDNTSAISQAKEP*ADHKSKNVPSKYHLIRDMLN 70
K ++ KF+TELGVVPS E + LLCDN AI+QAKEP + KSK++ +YHLIR+++
Sbjct: 84 KEAVWMKKFITELGVVPSIEEPISLLCDNNGAIAQAKEPRSHQKSKHILRRYHLIREIIE 143
Query: 69 RGNIKVCKVATEANIDDPFTKPL 1
RG++K+ KV + N DPFTK L
Sbjct: 144 RGDVKILKVDGKKNAADPFTKAL 166
Score = 41.2 bits (95), Expect(2) = 1e-22
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = -1
Query: 320 RSFKYCTESDSTTESEYIATLDAAKEACWI 231
+S K T +DSTTE+EYIA DAAKEA W+
Sbjct: 60 KSSKQATVADSTTEAEYIAASDAAKEAVWM 89
>OIT20400.1 hypothetical protein A4A49_59693, partial [Nicotiana attenuata]
Length = 85
Score = 92.8 bits (229), Expect = 1e-22
Identities = 46/76 (60%), Positives = 59/76 (77%)
Frame = -3
Query: 228 KFVTELGVVPSTEGSVELLCDNTSAISQAKEP*ADHKSKNVPSKYHLIRDMLNRGNIKVC 49
KF+TELGVVPSTEG+V LLCDNT AI+QAKEP + KSK+V YHLIR+++ R ++++
Sbjct: 1 KFLTELGVVPSTEGAVPLLCDNTGAIAQAKEPRSHQKSKHVLRWYHLIREIIERRDVEIQ 60
Query: 48 KVATEANIDDPFTKPL 1
KV + N DPFTK L
Sbjct: 61 KVDGKENAADPFTKAL 76
>ABF97047.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 94.0 bits (232), Expect(2) = 1e-22
Identities = 41/83 (49%), Positives = 62/83 (74%)
Frame = -3
Query: 249 KRSLLDMKFVTELGVVPSTEGSVELLCDNTSAISQAKEP*ADHKSKNVPSKYHLIRDMLN 70
K ++ KFV++LGV+ S ++L CDN+ AI+QAKEP + KSK++ +YHLIR+M+
Sbjct: 1165 KEAVWIKKFVSQLGVMTSASSPMDLYCDNSGAIAQAKEPRSHQKSKHILRRYHLIREMVG 1224
Query: 69 RGNIKVCKVATEANIDDPFTKPL 1
RG++K+CK+ T+ N+ DP TKPL
Sbjct: 1225 RGDVKICKIHTDLNVADPLTKPL 1247
Score = 39.7 bits (91), Expect(2) = 1e-22
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = -1
Query: 320 RSFKYCTESDSTTESEYIATLDAAKEACWI 231
+S K T +DSTTE+EYIA +AAKEA WI
Sbjct: 1141 KSSKQDTVADSTTEAEYIAASEAAKEAVWI 1170
>AAP44605.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1161
Score = 94.0 bits (232), Expect(2) = 1e-22
Identities = 41/83 (49%), Positives = 62/83 (74%)
Frame = -3
Query: 249 KRSLLDMKFVTELGVVPSTEGSVELLCDNTSAISQAKEP*ADHKSKNVPSKYHLIRDMLN 70
K ++ KFV++LGV+ S ++L CDN+ AI+QAKEP + KSK++ +YHLIR+M+
Sbjct: 1078 KEAVWIKKFVSQLGVMTSASSPMDLYCDNSGAIAQAKEPRSHQKSKHILRRYHLIREMVG 1137
Query: 69 RGNIKVCKVATEANIDDPFTKPL 1
RG++K+CK+ T+ N+ DP TKPL
Sbjct: 1138 RGDVKICKIHTDLNVADPLTKPL 1160
Score = 39.7 bits (91), Expect(2) = 1e-22
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = -1
Query: 320 RSFKYCTESDSTTESEYIATLDAAKEACWI 231
+S K T +DSTTE+EYIA +AAKEA WI
Sbjct: 1054 KSSKQDTVADSTTEAEYIAASEAAKEAVWI 1083