BLASTX nr result

ID: Lithospermum23_contig00028696 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00028696
         (334 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017234165.1 PREDICTED: F-box protein CPR30-like [Daucus carot...    54   3e-06
XP_017237740.1 PREDICTED: F-box protein CPR30-like [Daucus carot...    53   1e-05

>XP_017234165.1 PREDICTED: F-box protein CPR30-like [Daucus carota subsp. sativus]
           XP_017234171.1 PREDICTED: F-box protein CPR30-like
           [Daucus carota subsp. sativus]
          Length = 397

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 36/111 (32%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
 Frame = +3

Query: 3   WTKITRMKVSTFSGYAFGCMRTVEYSVTEKELILGNGRINS--MVRYDIEKKLVKDVKIR 176
           W+K   +      G++   +R V  S + + ++L    I+S  +V YD+E+K+VK+VK+R
Sbjct: 290 WSKALSVDKHGMPGFS-RFVRPVHISWSSQSVLL---EIDSSRLVWYDLERKMVKNVKVR 345

Query: 177 GQRNHGSHSDIYEESLVQLKNGDPWKEVENNSKKIEKPQKRDKFLAHGFKL 329
           G  N    S +Y +SL+QL   +  ++  ++    E+ ++RD FL+ GFKL
Sbjct: 346 GITNQFD-SHMYTQSLIQLDEDNQLQKPSHDKPPKEQQKRRDDFLSRGFKL 395


>XP_017237740.1 PREDICTED: F-box protein CPR30-like [Daucus carota subsp. sativus]
           XP_017237749.1 PREDICTED: F-box protein CPR30-like
           [Daucus carota subsp. sativus]
          Length = 390

 Score = 52.8 bits (125), Expect = 1e-05
 Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 5/114 (4%)
 Frame = +3

Query: 3   WTKITRMKVSTFSGYAFGCMRTVEYSVTEKELILGNGRINSMVRYDIEKKLVKDVKIRGQ 182
           W+K+  +K +   G  F  +R V +S   K ++L   R   +V YDI++K VK+V+I G 
Sbjct: 280 WSKVLSLKQAGPLG-PFSFVRPVAFSKCHKNVLLEVDRAK-LVWYDIKRKRVKNVRIHGI 337

Query: 183 RNHGSHSDIYEESLVQLKNGDPWKEVE-----NNSKKIEKPQKRDKFLAHGFKL 329
            N    S ++ ESL+Q+ N    K ++     N  KK +K  KRD FL+ GFKL
Sbjct: 338 PN-SFESYLFIESLLQITNDKEDKLLQKPSQDNQGKKEQK--KRDGFLSKGFKL 388


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