BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00028600
         (325 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 cop...   132   8e-34
KYP37021.1 Retrovirus-related Pol polyprotein from transposon TN...   104   1e-24
KYP36635.1 Retrovirus-related Pol polyprotein from transposon TN...   104   1e-24
KYP69992.1 Retrovirus-related Pol polyprotein from transposon TN...   101   8e-24
KYP64816.1 Retrovirus-related Pol polyprotein from transposon TN...    99   2e-23
KYP53379.1 Retrovirus-related Pol polyprotein from transposon TN...    99   1e-22
EOY09126.1 Uncharacterized protein TCM_024518 [Theobroma cacao]        96   5e-22
XP_008351909.1 PREDICTED: transcription initiation factor TFIID ...    98   1e-21
EOY22705.1 Transducin/WD40 repeat-like superfamily protein [Theo...    95   1e-20
KCW45629.1 hypothetical protein EUGRSUZ_L00625 [Eucalyptus grandis]    86   1e-19
KHN13665.1 Retrovirus-related Pol polyprotein from transposon TN...    88   1e-18
KYP50610.1 Retrovirus-related Pol polyprotein from transposon TN...    86   1e-18
EOY34202.1 Uncharacterized protein TCM_041944 [Theobroma cacao]        88   5e-18
KYP33977.1 Retrovirus-related Pol polyprotein from transposon TN...    83   1e-17
BAQ19356.1 putative gag-pol polyprotein [Torenia fournieri]            87   1e-17
KYP35896.1 Retrovirus-related Pol polyprotein from transposon TN...    83   2e-17
KYP71220.1 Retrovirus-related Pol polyprotein from transposon TN...    86   2e-17
KYP72977.1 Retrovirus-related Pol polyprotein from transposon TN...    84   3e-17
KYP36888.1 Retrovirus-related Pol polyprotein from transposon TN...    79   4e-17
KCW80303.1 hypothetical protein EUGRSUZ_C01663 [Eucalyptus grandis]    80   4e-17

>ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 copia LTR rider
           [Solanum lycopersicum]
          Length = 1307

 Score =  132 bits (333), Expect = 8e-34
 Identities = 67/103 (65%), Positives = 78/103 (75%)
 Frame = +1

Query: 16  DGFNGRNSFGLWQIKVMALLKREGIWSPLMKNPPAPVPENWDSLEEKAHSTLLLSLEDEI 195
           D F GRNSF LWQIK+ ALLK++G W+PL K+  A V      LEEKAHST++L L D++
Sbjct: 9   DKFTGRNSFSLWQIKMRALLKQQGFWAPLSKDKNAVVTPEMAILEEKAHSTIMLCLADDV 68

Query: 196 ITEFSEHETAAGLWAKLESLYMIRSLTNKLLLKQCPFSLRMQE 324
           ITE S+ ETAAGLW KLESLYM +SLTNKLLLKQ  F LRM E
Sbjct: 69  ITEVSDEETAAGLWLKLESLYMTKSLTNKLLLKQRLFGLRMAE 111


>KYP37021.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 352

 Score =  104 bits (260), Expect = 1e-24
 Identities = 55/114 (48%), Positives = 72/114 (63%), Gaps = 13/114 (11%)
 Frame = +1

Query: 22  FNGRNSFGLWQIKVMALLKREGIWSPLM-------------KNPPAPVPENWDSLEEKAH 162
           FNG+NSF LW+IK+ ALLK + +W+PL              +   A   E     EEKAH
Sbjct: 12  FNGKNSFNLWRIKMRALLKEQRVWAPLATTSVKQEVLSEPKEKASASKIEELAEQEEKAH 71

Query: 163 STLLLSLEDEIITEFSEHETAAGLWAKLESLYMIRSLTNKLLLKQCPFSLRMQE 324
           S +LLSL DE++ E ++ ETA+GLW KLE LYM +S+ NKLLLK+  F L M+E
Sbjct: 72  SLILLSLSDEVLYEVADEETASGLWCKLEKLYMTKSICNKLLLKRRLFGLHMKE 125


>KYP36635.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 364

 Score =  104 bits (260), Expect = 1e-24
 Identities = 55/114 (48%), Positives = 72/114 (63%), Gaps = 13/114 (11%)
 Frame = +1

Query: 22  FNGRNSFGLWQIKVMALLKREGIWSPLM-------------KNPPAPVPENWDSLEEKAH 162
           FNG+NSF LW+IK+ ALLK + +W+PL              +   A   E     EEKAH
Sbjct: 12  FNGKNSFNLWRIKMRALLKEQRVWAPLATTSVKQEVLSEPKEKASASKIEELAEQEEKAH 71

Query: 163 STLLLSLEDEIITEFSEHETAAGLWAKLESLYMIRSLTNKLLLKQCPFSLRMQE 324
           S +LLSL DE++ E ++ ETA+GLW KLE LYM +S+ NKLLLK+  F L M+E
Sbjct: 72  SLILLSLSDEVLYEVADEETASGLWCKLEKLYMTKSICNKLLLKRRLFGLHMKE 125


>KYP69992.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 307

 Score =  101 bits (252), Expect = 8e-24
 Identities = 54/114 (47%), Positives = 72/114 (63%), Gaps = 13/114 (11%)
 Frame = +1

Query: 22  FNGRNSFGLWQIKVMALLKREGIWSPL------------MKNPPAPVP-ENWDSLEEKAH 162
           FNG+NSF LW+IK+ ALLK + +W PL            + N    +  E+    EEKAH
Sbjct: 10  FNGKNSFNLWRIKMHALLKEQRVWGPLATTSVKKESKTELSNKSTSIKKEDLAEQEEKAH 69

Query: 163 STLLLSLEDEIITEFSEHETAAGLWAKLESLYMIRSLTNKLLLKQCPFSLRMQE 324
           S +LLSL +E++ E ++ ETA GLW KLE LYM +S+ NKLLLK+  F L M+E
Sbjct: 70  SLILLSLSNEVLYEVADQETACGLWLKLEKLYMTKSICNKLLLKRRLFGLHMKE 123


>KYP64816.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 252

 Score = 99.4 bits (246), Expect = 2e-23
 Identities = 50/108 (46%), Positives = 73/108 (67%), Gaps = 3/108 (2%)
 Frame = +1

Query: 10  EDDGFNGRNSFGLWQIKVMALLKREGIWSPLM---KNPPAPVPENWDSLEEKAHSTLLLS 180
           E + F G+N FGLW++K+ ALL  +G+   L    K   A V E    ++EKAHS ++LS
Sbjct: 7   EVEKFTGQNDFGLWRLKMRALLVHQGLVDALAGEAKAENATVDEERKKMQEKAHSAIILS 66

Query: 181 LEDEIITEFSEHETAAGLWAKLESLYMIRSLTNKLLLKQCPFSLRMQE 324
           L D+++ + S+ +TAAG+W+KLESLYM +SL N+L LKQ  +S +M E
Sbjct: 67  LGDKVLRQVSKEKTAAGIWSKLESLYMTKSLVNRLYLKQSLYSFKMNE 114


>KYP53379.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 307

 Score = 98.6 bits (244), Expect = 1e-22
 Identities = 50/108 (46%), Positives = 72/108 (66%), Gaps = 3/108 (2%)
 Frame = +1

Query: 10  EDDGFNGRNSFGLWQIKVMALLKREGIWSPLM---KNPPAPVPENWDSLEEKAHSTLLLS 180
           E + F G+N FGLW++K+ ALL  +G+   L    K   A V E    ++EKAHS ++LS
Sbjct: 7   EVEKFTGQNDFGLWRLKMRALLVHQGLVDALAGEAKAENATVDEERKKMQEKAHSAIILS 66

Query: 181 LEDEIITEFSEHETAAGLWAKLESLYMIRSLTNKLLLKQCPFSLRMQE 324
           L D+++ + S+ +TAAG+W+KLESLYM +SL N+L LKQ  +S  M E
Sbjct: 67  LGDKVLRQVSKEKTAAGIWSKLESLYMTKSLVNRLYLKQSLYSFNMNE 114


>EOY09126.1 Uncharacterized protein TCM_024518 [Theobroma cacao]
          Length = 277

 Score = 96.3 bits (238), Expect = 5e-22
 Identities = 48/108 (44%), Positives = 71/108 (65%), Gaps = 3/108 (2%)
 Frame = +1

Query: 10  EDDGFNGRNSFGLWQIKVMALLKREGIWSPLMKNPPAPV---PENWDSLEEKAHSTLLLS 180
           E + FNGRN F LW++K+ ALL ++G+   L      P        D L EKAHS +LL+
Sbjct: 9   EIEKFNGRNDFSLWRVKMCALLVQQGLLKALKGKEHLPSNLSDSEKDDLMEKAHSAILLT 68

Query: 181 LEDEIITEFSEHETAAGLWAKLESLYMIRSLTNKLLLKQCPFSLRMQE 324
           L DE++ E ++ E+AA +W KLES+Y+ +SLTN+L +KQ  ++L+M E
Sbjct: 69  LSDEVLREVTDEESAAAMWFKLESIYITKSLTNRLYMKQRLYTLKMSE 116


>XP_008351909.1 PREDICTED: transcription initiation factor TFIID subunit 2-like
           [Malus domestica]
          Length = 454

 Score = 97.8 bits (242), Expect = 1e-21
 Identities = 49/106 (46%), Positives = 71/106 (66%), Gaps = 5/106 (4%)
 Frame = +1

Query: 22  FNGRNSFGLWQIKVMALLKREGIWSPLMKNPPAPVPENWDSLEE-----KAHSTLLLSLE 186
           FNGRN F LW++K+ A+L ++G+   L       +P++W + E+     +AHS ++LSL 
Sbjct: 10  FNGRNDFSLWRVKMRAVLVQQGLLKALQG--VEALPQDWSAEEKEDALNRAHSAIMLSLS 67

Query: 187 DEIITEFSEHETAAGLWAKLESLYMIRSLTNKLLLKQCPFSLRMQE 324
           DE++ E     TAAGLW KLES+YM +SLTN+L LKQ  ++LRM E
Sbjct: 68  DEVLREMENETTAAGLWLKLESIYMTKSLTNRLYLKQRLYTLRMTE 113


>EOY22705.1 Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
          Length = 1029

 Score = 95.1 bits (235), Expect = 1e-20
 Identities = 48/108 (44%), Positives = 71/108 (65%), Gaps = 3/108 (2%)
 Frame = +1

Query: 10  EDDGFNGRNSFGLWQIKVMALLKREGIWSPLMKNPPAPV---PENWDSLEEKAHSTLLLS 180
           E + FNGRN F LW++K+ ALL ++G+   L      P        D L +KAHS +LL+
Sbjct: 131 EIEKFNGRNDFSLWRVKMRALLVQQGLLKALKGKEHLPSNLSDGEKDDLMKKAHSVILLA 190

Query: 181 LEDEIITEFSEHETAAGLWAKLESLYMIRSLTNKLLLKQCPFSLRMQE 324
           L DE++ E ++ E+AA +W KLES+YM +SLTN+L +KQ  ++L+M E
Sbjct: 191 LSDEVLREVTDEESAAAVWFKLESIYMTKSLTNRLYMKQRLYTLKMSE 238


>KCW45629.1 hypothetical protein EUGRSUZ_L00625 [Eucalyptus grandis]
          Length = 101

 Score = 85.5 bits (210), Expect = 1e-19
 Identities = 43/92 (46%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
 Frame = +1

Query: 22  FNGRNSFGLWQIKVMALLKREGIWSPLMKNPPAPVPE-NWDSLEEKAHSTLLLSLEDEII 198
           F+G+N+FGLW+IK+  LL+REG    L +N P  +   +   +EEKAHST+ LSL D++ 
Sbjct: 10  FDGQNNFGLWRIKMKVLLRREGSVRALNRNYPNDMTTADIKDMEEKAHSTIQLSLSDKVP 69

Query: 199 TEFSEHETAAGLWAKLESLYMIRSLTNKLLLK 294
            E ++ +  +GLW KLESLY+ +S+T +L LK
Sbjct: 70  REVADEKRVSGLWNKLESLYIKKSITTRLFLK 101


>KHN13665.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 337

 Score = 88.2 bits (217), Expect = 1e-18
 Identities = 49/104 (47%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
 Frame = +1

Query: 22  FNGRNSFGLWQIKVMALLKREGIWSPLM---KNPPAPVPENWDSLEEKAHSTLLLSLEDE 192
           F G N F L +IK+ ALL  +G+   L    K P     +    L  KAHST++LSL DE
Sbjct: 10  FTGENDFSLRRIKMQALLVHQGLDDALQGASKLPSTLSDKEKKDLLSKAHSTIILSLGDE 69

Query: 193 IITEFSEHETAAGLWAKLESLYMIRSLTNKLLLKQCPFSLRMQE 324
           ++ E +E ++AAG+W KLESLYM +SLTNKL LK+    L+M+E
Sbjct: 70  VLREVAEEKSAAGIWLKLESLYMTKSLTNKLYLKKRLHQLKMEE 113


>KYP50610.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 210

 Score = 85.9 bits (211), Expect = 1e-18
 Identities = 45/101 (44%), Positives = 61/101 (60%), Gaps = 13/101 (12%)
 Frame = +1

Query: 22  FNGRNSFGLWQIKVMALLKREGIWSPLM-----KNPPAPVPENWDSL--------EEKAH 162
           FNG+NSF LW+IK+ ALLK + +W PL      K     + +   S+        EEKAH
Sbjct: 10  FNGKNSFNLWRIKMRALLKEQRVWGPLATTSVKKERKTELSDKSTSIKKEDHAEQEEKAH 69

Query: 163 STLLLSLEDEIITEFSEHETAAGLWAKLESLYMIRSLTNKL 285
           S +LLSL DE++ E ++ ETA GLW KLE LYM + +  K+
Sbjct: 70  SLILLSLSDEVLYEVADQETACGLWLKLEKLYMTKDIDVKI 110


>EOY34202.1 Uncharacterized protein TCM_041944 [Theobroma cacao]
          Length = 698

 Score = 87.8 bits (216), Expect = 5e-18
 Identities = 46/108 (42%), Positives = 70/108 (64%), Gaps = 3/108 (2%)
 Frame = +1

Query: 10  EDDGFNGRNSFGLWQIKVMALLKREGIWSPLMKNPPAPVPEN---WDSLEEKAHSTLLLS 180
           E + FNGRN F LW +K+ ALL ++G+   L +        +    D+L EKAHS +LL+
Sbjct: 9   EIEKFNGRNDFSLWCVKMCALLVQQGLLKALKEKEHLLSNLSNGEKDNLMEKAHSAILLA 68

Query: 181 LEDEIITEFSEHETAAGLWAKLESLYMIRSLTNKLLLKQCPFSLRMQE 324
           L DE+I E ++ E+A  +W KL+S+YM +SL N+L +KQ  ++L+M E
Sbjct: 69  LSDEVIREVTDEESAIAVWLKLKSIYMTKSLMNRLYIKQRLYTLKMSE 116


>KYP33977.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 177

 Score = 82.8 bits (203), Expect = 1e-17
 Identities = 45/106 (42%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
 Frame = +1

Query: 10  EDDGFNGRNSFGLWQIKVMALLKREGIWSPLMKNPPAPVPENWDS-LEEKAHSTLLLSLE 186
           E + F+G   F LW++K+ ALL  +G+ + L       V E   + + +KAHS +LLSL 
Sbjct: 7   EIEKFSGLGDFSLWRVKMNALLVHQGLDAALSDEAIMKVEERKRTEVLKKAHSAILLSLG 66

Query: 187 DEIITEFSEHETAAGLWAKLESLYMIRSLTNKLLLKQCPFSLRMQE 324
           DE++ E +E +TA  +W KLESLY+ RSL N+L LK+  ++L+M+E
Sbjct: 67  DEVLREVAEEKTAMEIWKKLESLYLKRSLANRLYLKKRLYTLQMEE 112


>BAQ19356.1 putative gag-pol polyprotein [Torenia fournieri]
          Length = 605

 Score = 86.7 bits (213), Expect = 1e-17
 Identities = 51/127 (40%), Positives = 71/127 (55%), Gaps = 22/127 (17%)
 Frame = +1

Query: 10  EDDGFNGRNSFGLWQIKVMALLKREGIWSPLM-KNPPAPV-----PENWDS--------- 144
           E + F G N FGLW++K+ ALL ++G+   LM ++PPA V     P   +          
Sbjct: 6   EVEKFTGDNDFGLWKMKMRALLTQQGLIEVLMVEDPPATVVAGTAPTGQEDAAAAAVNAQ 65

Query: 145 -------LEEKAHSTLLLSLEDEIITEFSEHETAAGLWAKLESLYMIRSLTNKLLLKQCP 303
                  L+ KAHS ++LSL D ++ + S   TA GLW KLE LYM +SL N+L LKQ  
Sbjct: 66  AAAEKKILDSKAHSVIILSLGDRVLRQVSHESTALGLWKKLEELYMTKSLANRLYLKQAL 125

Query: 304 FSLRMQE 324
           +S +M E
Sbjct: 126 YSFKMIE 132


>KYP35896.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 208

 Score = 83.2 bits (204), Expect = 2e-17
 Identities = 42/100 (42%), Positives = 58/100 (58%), Gaps = 12/100 (12%)
 Frame = +1

Query: 22  FNGRNSFGLWQIKVMALLKREGIWSPLM------------KNPPAPVPENWDSLEEKAHS 165
           FNG+N+F LW+IK+ ALLK + +W PL                 +   E+    EEK HS
Sbjct: 9   FNGKNNFNLWRIKMRALLKEQRVWGPLATTSIKKESKTESSKSTSIKKEDLAEQEEKTHS 68

Query: 166 TLLLSLEDEIITEFSEHETAAGLWAKLESLYMIRSLTNKL 285
            +LLSL DE++ E ++ ETA GLW KLE LYM + +  K+
Sbjct: 69  LILLSLSDEVLYEVADQETACGLWLKLEKLYMTKDIDVKI 108


>KYP71220.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 690

 Score = 85.9 bits (211), Expect = 2e-17
 Identities = 44/104 (42%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
 Frame = +1

Query: 22  FNGRNSFGLWQIKVMALLKREGIWSPL---MKNPPAPVPENWDSLEEKAHSTLLLSLEDE 192
           F+G+  F +W++++ A+L + G+   L    K P     E WD L+EKA S + L L  E
Sbjct: 12  FDGKICFSIWKVQMKAVLTQNGLKKALDGKAKKPVNMTDEQWDELDEKALSAIQLCLSKE 71

Query: 193 IITEFSEHETAAGLWAKLESLYMIRSLTNKLLLKQCPFSLRMQE 324
           ++ E +   TAA LW KLESLYM +SL NKL LK+  +++RM E
Sbjct: 72  VLREVANETTAAALWLKLESLYMTKSLANKLRLKERLYTIRMVE 115


>KYP72977.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 308

 Score = 84.3 bits (207), Expect = 3e-17
 Identities = 45/106 (42%), Positives = 66/106 (62%), Gaps = 3/106 (2%)
 Frame = +1

Query: 16  DGFNGRNSFGLWQIKVMALLKREGIWSPLM---KNPPAPVPENWDSLEEKAHSTLLLSLE 186
           D FNG N F LW++K+ A+L  +G  + L    K P   + ++  ++ EKAHS +LLSL 
Sbjct: 9   DKFNGSNDFTLWKLKMKAVLVHQGCAAALEGADKLPITMIDDDKKAMLEKAHSLILLSLT 68

Query: 187 DEIITEFSEHETAAGLWAKLESLYMIRSLTNKLLLKQCPFSLRMQE 324
           DE++ E  E  TAAG+W  LE  +  +SLTN+L  KQ  ++L+M E
Sbjct: 69  DEVLREVGEETTAAGMWKMLEDKFQQKSLTNRLYQKQRLYTLQMSE 114


>KYP36888.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 101

 Score = 79.3 bits (194), Expect = 4e-17
 Identities = 42/92 (45%), Positives = 56/92 (60%), Gaps = 14/92 (15%)
 Frame = +1

Query: 22  FNGRNSFGLWQIKVMALLKREGIWSPLM----------KNPPAPVPENWDSL----EEKA 159
           FNG+N F LW+IK+ ALLK + +W PL+          K+   P     + L    EEKA
Sbjct: 10  FNGKNIFNLWRIKMRALLKEQRVWGPLVSVSAKKENIAKSEEKPTSVKKEDLAEQEEEKA 69

Query: 160 HSTLLLSLEDEIITEFSEHETAAGLWAKLESL 255
           HS +LLSL DE++ E ++ ETA+GLW KLE L
Sbjct: 70  HSLILLSLSDEVLYEVADQETASGLWLKLEKL 101


>KCW80303.1 hypothetical protein EUGRSUZ_C01663 [Eucalyptus grandis]
          Length = 117

 Score = 79.7 bits (195), Expect = 4e-17
 Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
 Frame = +1

Query: 22  FNGRNSFGLWQIKVMALLKREGIWSPLMKNPPAPVPE-NWDSLEEKAHSTLLLSLEDEII 198
           F+ +N+F LW+I + ALL  EG+   L +N P  +       +++KAHS + LSL D++ 
Sbjct: 11  FDDQNNFELWRINMSALLHSEGLVRALDRNYPDDMTSAEIKEMDKKAHSIIQLSLSDKVF 70

Query: 199 TEFSEHETAAGLWAKLESLYMIRSLTNKLLLKQCPFSLRMQE 324
            E ++ ET  GLW KLESLYM +SL  +L LK   ++L++Q+
Sbjct: 71  HEVTDEETVLGLWNKLESLYMKKSLKIRLFLKHLLYALKVQK 112