BLASTX nr result

ID: Lithospermum23_contig00028247 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00028247
         (456 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAV92872.1 zf-RVT domain-containing protein, partial [Cephalotus...    58   3e-07
OAP17544.1 hypothetical protein AXX17_AT1G39620 [Arabidopsis tha...    59   4e-07
XP_018436223.1 PREDICTED: uncharacterized protein LOC108808600 [...    57   1e-06
GAV72066.1 LOW QUALITY PROTEIN: zf-RVT domain-containing protein...    57   1e-06
GAV93112.1 zf-RVT domain-containing protein, partial [Cephalotus...    56   2e-06
JAU09941.1 hypothetical protein GA_TR1319_c4_g1_i1_g.4136, parti...    54   2e-06
XP_013651240.1 PREDICTED: uncharacterized protein LOC106355927 [...    55   6e-06

>GAV92872.1 zf-RVT domain-containing protein, partial [Cephalotus follicularis]
          Length = 228

 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 42/132 (31%), Positives = 54/132 (40%), Gaps = 9/132 (6%)
 Frame = -1

Query: 456 GVSTSFWHDMWHTKGVL-DVVVTNVAKR-------SREYLMIQVWLRSLSDRWPKGRHCT 301
           G S S WHD W    VL D +V    +R        R  L+  V +R     WP      
Sbjct: 5   GNSFSLWHDPW----VLGDSIVNRFGERVIYDSGLPRNALISSV-IREGRWEWPTTSSDL 59

Query: 300 HEIQDLIAGVPHLRMDVQDKVKWKGYGSVVKATTIWRSLAPEKPVRPWTKLSWYKGHILI 121
            E+ ++ A +P      +DKV W   G        W SL P  PV PW  + W+   I  
Sbjct: 60  LELNNITAAIPF--RSGRDKVHWMKRGGTFSLQQAWMSLIPHSPVIPWANVVWFPKRIPK 117

Query: 120 HSFVCWV-LCQG 88
           HSF  W+  C G
Sbjct: 118 HSFCLWLTYCNG 129


>OAP17544.1 hypothetical protein AXX17_AT1G39620 [Arabidopsis thaliana]
          Length = 533

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 21/141 (14%)
 Frame = -1

Query: 456 GVSTSFWHDMWHTKG-VLDVV--------------VTNVAKRSREYLMIQVWLRSLSDRW 322
           GV+  FWHD W   G ++D+V              V   A R+R +     W+ S   R 
Sbjct: 254 GVTAKFWHDNWTGHGPLIDLVGPLGPQTVGLPIDAVVRDALRNRSW-----WIESSRSRS 308

Query: 321 PKGRHCTHEIQDLIAGVPHLRMDVQ--DKVKWK----GYGSVVKATTIWRSLAPEKPVRP 160
           P      +++++L+     L +D Q  D   WK       ++  A   W +L P+  + P
Sbjct: 309 P----IINQLRNLLPVAEGL-IDCQHDDSFIWKTDLHAPSNIFSAAKTWLALHPQNHIVP 363

Query: 159 WTKLSWYKGHILIHSFVCWVL 97
           W K  W+K H+  H+F+CWV+
Sbjct: 364 WYKAVWFKNHVPKHAFICWVV 384


>XP_018436223.1 PREDICTED: uncharacterized protein LOC108808600 [Raphanus sativus]
          Length = 1788

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 39/127 (30%), Positives = 56/127 (44%), Gaps = 8/127 (6%)
 Frame = -1

Query: 456  GVSTSFWHDMWHTKGVLDVVVTNVAKRSREYLMIQVWLRSLSDR-WPKGRHCTHEIQDLI 280
            G+STSFWHD+W   G L  V+     R            ++S   W      + +  DL 
Sbjct: 1519 GLSTSFWHDVWTPMGQLSSVMGPAGPRVLRIRDNAKVADAISGHTWSLPHPRSQQEVDLH 1578

Query: 279  AGVPH----LRMDVQDKVKWKGYGS---VVKATTIWRSLAPEKPVRPWTKLSWYKGHILI 121
            A +      L +DV D  +W    S   V K++T W  L P +  + W  + W+KG +  
Sbjct: 1579 AYLTTITIPLPIDVHDVFEWVAGDSPLRVFKSSTTWELLRPRQEKQEWVDVVWFKGAVPK 1638

Query: 120  HSFVCWV 100
            HSF  WV
Sbjct: 1639 HSFTMWV 1645


>GAV72066.1 LOW QUALITY PROTEIN: zf-RVT domain-containing protein, partial
           [Cephalotus follicularis]
          Length = 329

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 38/131 (29%), Positives = 54/131 (41%), Gaps = 8/131 (6%)
 Frame = -1

Query: 456 GVSTSFWHDMW-------HTKGVLDVVVTNVAKRSREYLMIQVWLRSLSDRWPKGRHCTH 298
           G S S WHD W       +  G   +  + + + S    +I   +R     WP       
Sbjct: 164 GNSFSLWHDPWVFGASIVNRFGERVIYDSGIPRNS----LISRVIREGMWEWPTTSCDLL 219

Query: 297 EIQDLIAGVPHLRMDVQDKVKWKGYGSVVKATTIWRSLAPEKPVRPWTKLSWYKGHILIH 118
           E+ ++ A +P      +DKV W   G +      W SL P  PV PW K+ W+   I  H
Sbjct: 220 ELNNITAAIP--LPAGRDKVHWMKKGGIFSLQQAWLSLIPHSPVVPWAKVVWFPKRIPKH 277

Query: 117 SFVCWV-LCQG 88
           SF  W+  C G
Sbjct: 278 SFCLWLTFCNG 288


>GAV93112.1 zf-RVT domain-containing protein, partial [Cephalotus follicularis]
          Length = 289

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 42/131 (32%), Positives = 54/131 (41%), Gaps = 8/131 (6%)
 Frame = -1

Query: 456 GVSTSFWHDMWHTKGVLDVVVTNVAKR-------SREYLMIQVWLRSLSDRWPKGRHCTH 298
           G S S WHD W      D +V    +R        R  L+  V +R     WP       
Sbjct: 5   GYSFSLWHDPWLLG---DSIVNRFGERVIYDSGIPRNALINSV-IREGRWEWPTTSCQLL 60

Query: 297 EIQDLIAGVPHLRMDVQDKVKWKGYGSVVKATTIWRSLAPEKPVRPWTKLSWYKGHILIH 118
           E+ ++ A +P LR   +DKV W   G        W SL P  PV PW  + W+   I  H
Sbjct: 61  ELNNITAAIP-LRAG-RDKVHWLKRGGSFSLQQAWLSLIPHSPVVPWANVVWFPKRIPKH 118

Query: 117 SFVCWV-LCQG 88
           SF  W+  C G
Sbjct: 119 SFCLWLTFCNG 129


>JAU09941.1 hypothetical protein GA_TR1319_c4_g1_i1_g.4136, partial [Noccaea
           caerulescens]
          Length = 121

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 37/119 (31%), Positives = 52/119 (43%), Gaps = 9/119 (7%)
 Frame = -1

Query: 441 FWHDMWHTKG-VLDVVVTNVAKRSREYLMIQVWLRSLSDRWP--KGRH-CTHEIQDLI-A 277
           FWHD W + G ++D+   N  + S  + M  V      D W    GRH     ++D +  
Sbjct: 3   FWHDDWTSLGPLIDITGANGPRVSGIHKMASVKQACRGDSWSISGGRHPILRLLRDCLPT 62

Query: 276 GVPHLRMDVQDKVKWKGYG----SVVKATTIWRSLAPEKPVRPWTKLSWYKGHILIHSF 112
            +P    D QD   W+        V  A+  W S  P  P+ PWTK  W+K  I  H+F
Sbjct: 63  DIPPSLNDDQDCFLWRNSEFSTPGVFSASATWESFHPNPPILPWTKAVWFKECIPKHAF 121


>XP_013651240.1 PREDICTED: uncharacterized protein LOC106355927 [Brassica napus]
          Length = 528

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 40/136 (29%), Positives = 56/136 (41%), Gaps = 13/136 (9%)
 Frame = -1

Query: 456 GVSTSFWHDMWHTKGVLDVVVTNVAKRSR---------EYLMIQVWLRSLSDRWPKGRHC 304
           GV  SFWHD W   G L  +V ++  +           E + +  W  S S R P  R  
Sbjct: 20  GVFASFWHDNWTELGSLIDIVGSLGPQVSGIPIDSSVSEAVSLGAWRESRS-RNPILRRL 78

Query: 303 THEIQDLIAGVPHLRMDVQDKVKWKGYG----SVVKATTIWRSLAPEKPVRPWTKLSWYK 136
               Q L   +P +     D   W+       SV   + +W SL P  P+  W K  W+ 
Sbjct: 79  R---QSLPTQIPDINSPENDYYMWRNSPDDPPSVFSTSKLWTSLNPPPPLVSWYKAVWFS 135

Query: 135 GHILIHSFVCWVLCQG 88
             I  HSF+ W+L +G
Sbjct: 136 QKIPKHSFMAWLLLKG 151


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