BLASTX nr result
ID: Lithospermum23_contig00027283
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00027283
(313 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AEM44886.1 RNA polymerase beta chain, partial (plastid) [Borago ... 191 1e-57
ADX99119.1 RNA polymerase beta II subunit, partial (chloroplast)... 182 1e-55
AEM44884.1 RNA polymerase beta chain, partial (plastid) [Hydroph... 186 5e-55
ALI91160.1 RpoC2, partial (chloroplast) [Borago officinalis] 191 1e-54
ADX99127.1 RNA polymerase beta II subunit, partial (chloroplast)... 181 7e-54
AEM44887.1 RNA polymerase beta chain, partial (plastid) [Hydrole... 182 9e-54
KCW49088.1 hypothetical protein EUGRSUZ_K02695 [Eucalyptus grandis] 181 1e-53
AEM44891.1 RNA polymerase beta chain, partial (plastid) [Olinia ... 181 1e-53
ADX99120.1 RNA polymerase beta II subunit, partial (chloroplast)... 182 1e-53
AEM44881.1 RNA polymerase beta chain, partial (plastid) [Petalon... 182 2e-53
YP_009049741.1 hypothetical protein (mitochondrion) [Capsicum an... 180 5e-53
AEM44885.1 RNA polymerase beta chain, partial (plastid) [Strychn... 181 5e-53
AEM44883.1 RNA polymerase beta chain, partial (plastid) [Curtisi... 180 5e-53
AEM44882.1 RNA polymerase beta chain, partial (plastid) [Hydrang... 181 9e-53
AKZ23951.1 RNA polymerase beta'' subunit (plastid) [Heliopsis he... 186 1e-52
AJE74607.1 RNA polymerase beta'' subunit (plastid) [Lygodesmia j... 186 1e-52
ADX99111.1 RNA polymerase beta II subunit, partial (chloroplast)... 181 1e-52
YP_009338742.1 RNA polymerase beta'' subunit (chloroplast) [Cari... 186 1e-52
YP_009309354.1 RNA polymerase beta'' subunit (chloroplast) [Pogo... 186 1e-52
ADD31152.1 RNA polymerase beta'' subunit protein (chloroplast) [... 186 1e-52
>AEM44886.1 RNA polymerase beta chain, partial (plastid) [Borago officinalis]
Length = 414
Score = 191 bits (486), Expect = 1e-57
Identities = 96/101 (95%), Positives = 98/101 (97%)
Frame = +3
Query: 9 STITSLGQLICENVCIAKKRPRLKSGQVILIQVDSIVIRSAKPFLATPGATVHGHYGEIL 188
STI SLGQLICENVCIAKKRPRLKSGQVIL+QVDSIVIRSAKPFLATPGATVHGHYGEIL
Sbjct: 210 STIMSLGQLICENVCIAKKRPRLKSGQVILVQVDSIVIRSAKPFLATPGATVHGHYGEIL 269
Query: 189 YEGQTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 311
YEG+TL TF YEKSRSGDITQGLPKVEQVLEVRSIDSISMN
Sbjct: 270 YEGETLATFFYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 310
>ADX99119.1 RNA polymerase beta II subunit, partial (chloroplast) [Citharexylum
montevidense]
Length = 287
Score = 182 bits (463), Expect = 1e-55
Identities = 88/103 (85%), Positives = 96/103 (93%)
Frame = +3
Query: 3 KASTITSLGQLICENVCIAKKRPRLKSGQVILIQVDSIVIRSAKPFLATPGATVHGHYGE 182
+ STI SLGQ ICEN+CIAK P LKSGQVIL+QVDS++IRSAKP+LATPGATVHGHYGE
Sbjct: 3 ETSTIMSLGQFICENICIAKNAPHLKSGQVILVQVDSVIIRSAKPYLATPGATVHGHYGE 62
Query: 183 ILYEGQTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 311
ILY+G TL+TFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN
Sbjct: 63 ILYQGDTLITFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 105
>AEM44884.1 RNA polymerase beta chain, partial (plastid) [Hydrophyllum
fendleri]
Length = 455
Score = 186 bits (471), Expect = 5e-55
Identities = 93/100 (93%), Positives = 95/100 (95%)
Frame = +3
Query: 12 TITSLGQLICENVCIAKKRPRLKSGQVILIQVDSIVIRSAKPFLATPGATVHGHYGEILY 191
TI SLGQ ICENVCIAK RP LKSGQVIL+QVDSIVIRSAKP+LATPGATVHGHYGEILY
Sbjct: 251 TIISLGQFICENVCIAKNRPHLKSGQVILVQVDSIVIRSAKPYLATPGATVHGHYGEILY 310
Query: 192 EGQTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 311
EG TLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN
Sbjct: 311 EGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 350
>ALI91160.1 RpoC2, partial (chloroplast) [Borago officinalis]
Length = 1366
Score = 191 bits (486), Expect = 1e-54
Identities = 96/101 (95%), Positives = 98/101 (97%)
Frame = +3
Query: 9 STITSLGQLICENVCIAKKRPRLKSGQVILIQVDSIVIRSAKPFLATPGATVHGHYGEIL 188
STI SLGQLICENVCIAKKRPRLKSGQVIL+QVDSIVIRSAKPFLATPGATVHGHYGEIL
Sbjct: 1057 STIMSLGQLICENVCIAKKRPRLKSGQVILVQVDSIVIRSAKPFLATPGATVHGHYGEIL 1116
Query: 189 YEGQTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 311
YEG+TL TF YEKSRSGDITQGLPKVEQVLEVRSIDSISMN
Sbjct: 1117 YEGETLATFFYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 1157
>ADX99127.1 RNA polymerase beta II subunit, partial (chloroplast) [Recordia
boliviana]
Length = 404
Score = 181 bits (460), Expect = 7e-54
Identities = 88/103 (85%), Positives = 95/103 (92%)
Frame = +3
Query: 3 KASTITSLGQLICENVCIAKKRPRLKSGQVILIQVDSIVIRSAKPFLATPGATVHGHYGE 182
+ STI SLGQ ICEN+CIAK P LKSGQVIL+Q DS+VIRSAKP+LATPGATVHGHYGE
Sbjct: 205 ETSTIMSLGQFICENICIAKNAPHLKSGQVILVQADSVVIRSAKPYLATPGATVHGHYGE 264
Query: 183 ILYEGQTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 311
ILY+G TL+TFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN
Sbjct: 265 ILYQGDTLITFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 307
>AEM44887.1 RNA polymerase beta chain, partial (plastid) [Hydrolea ovata]
Length = 465
Score = 182 bits (463), Expect = 9e-54
Identities = 89/103 (86%), Positives = 96/103 (93%)
Frame = +3
Query: 3 KASTITSLGQLICENVCIAKKRPRLKSGQVILIQVDSIVIRSAKPFLATPGATVHGHYGE 182
+ STI SLGQ ICENVCIAK RP LKSGQVI +QVDS+VIRSAKP+LATPGAT+HGHYGE
Sbjct: 258 ETSTIISLGQFICENVCIAKNRPHLKSGQVIFVQVDSVVIRSAKPYLATPGATLHGHYGE 317
Query: 183 ILYEGQTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 311
ILY+G TLVTF+YEKSRSGDITQGLPKVEQVLEVRSIDSISMN
Sbjct: 318 ILYQGDTLVTFLYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 360
>KCW49088.1 hypothetical protein EUGRSUZ_K02695 [Eucalyptus grandis]
Length = 422
Score = 181 bits (460), Expect = 1e-53
Identities = 89/101 (88%), Positives = 95/101 (94%)
Frame = +3
Query: 9 STITSLGQLICENVCIAKKRPRLKSGQVILIQVDSIVIRSAKPFLATPGATVHGHYGEIL 188
STI SLGQ ICENVCI+K P LKSGQV+++QVDS+VIRSAKP+LATPGATVHGHYGEIL
Sbjct: 116 STIISLGQFICENVCISKNGPHLKSGQVLIVQVDSVVIRSAKPYLATPGATVHGHYGEIL 175
Query: 189 YEGQTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 311
YEG TLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN
Sbjct: 176 YEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 216
>AEM44891.1 RNA polymerase beta chain, partial (plastid) [Olinia emarginata]
Length = 393
Score = 181 bits (458), Expect = 1e-53
Identities = 88/101 (87%), Positives = 95/101 (94%)
Frame = +3
Query: 9 STITSLGQLICENVCIAKKRPRLKSGQVILIQVDSIVIRSAKPFLATPGATVHGHYGEIL 188
STI SLGQ ICENVC+AK R LKSGQV+++QVDS+VIRSAKP+LATPGAT+HGHYGEIL
Sbjct: 187 STIISLGQFICENVCLAKNRSHLKSGQVLVVQVDSVVIRSAKPYLATPGATIHGHYGEIL 246
Query: 189 YEGQTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 311
YEG TLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN
Sbjct: 247 YEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 287
>ADX99120.1 RNA polymerase beta II subunit, partial (chloroplast) [Baillonia
amabilis]
Length = 479
Score = 182 bits (463), Expect = 1e-53
Identities = 88/103 (85%), Positives = 96/103 (93%)
Frame = +3
Query: 3 KASTITSLGQLICENVCIAKKRPRLKSGQVILIQVDSIVIRSAKPFLATPGATVHGHYGE 182
+ STI SLGQ ICEN+CIAK P LKSGQVIL+QVDS++IRSAKP+LATPGATVHGHYGE
Sbjct: 263 ETSTIMSLGQFICENICIAKNAPHLKSGQVILVQVDSVIIRSAKPYLATPGATVHGHYGE 322
Query: 183 ILYEGQTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 311
ILY+G TL+TFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN
Sbjct: 323 ILYQGDTLITFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 365
>AEM44881.1 RNA polymerase beta chain, partial (plastid) [Petalonyx parryi]
Length = 515
Score = 182 bits (463), Expect = 2e-53
Identities = 89/103 (86%), Positives = 96/103 (93%)
Frame = +3
Query: 3 KASTITSLGQLICENVCIAKKRPRLKSGQVILIQVDSIVIRSAKPFLATPGATVHGHYGE 182
+ STI SLGQ ICENVCIAK P LKSGQV+++Q+DS+VIRSAKP+LATPGATVHGHYGE
Sbjct: 309 ETSTIISLGQFICENVCIAKNGPHLKSGQVLIVQIDSVVIRSAKPYLATPGATVHGHYGE 368
Query: 183 ILYEGQTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 311
ILYEG TLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN
Sbjct: 369 ILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 411
>YP_009049741.1 hypothetical protein (mitochondrion) [Capsicum annuum] AIG90099.1
hypothetical protein (mitochondrion) [Capsicum annuum]
Length = 430
Score = 180 bits (456), Expect = 5e-53
Identities = 91/103 (88%), Positives = 94/103 (91%)
Frame = +3
Query: 3 KASTITSLGQLICENVCIAKKRPRLKSGQVILIQVDSIVIRSAKPFLATPGATVHGHYGE 182
+ S I SLGQ ICENVCIAK P LKSGQVIL+QVDSIVIRSAKP+LATPGATVHGHYGE
Sbjct: 112 ETSKIISLGQFICENVCIAKNGPPLKSGQVILVQVDSIVIRSAKPYLATPGATVHGHYGE 171
Query: 183 ILYEGQTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 311
LYEG TLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN
Sbjct: 172 TLYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 214
>AEM44885.1 RNA polymerase beta chain, partial (plastid) [Strychnos spinosa]
Length = 467
Score = 181 bits (458), Expect = 5e-53
Identities = 89/103 (86%), Positives = 95/103 (92%)
Frame = +3
Query: 3 KASTITSLGQLICENVCIAKKRPRLKSGQVILIQVDSIVIRSAKPFLATPGATVHGHYGE 182
+ STI SLGQLICENVCIAK P LKSGQVI +QVDS+VIRSAKP+LA PGATVHGHYGE
Sbjct: 263 ETSTIISLGQLICENVCIAKNGPHLKSGQVIFVQVDSVVIRSAKPYLAIPGATVHGHYGE 322
Query: 183 ILYEGQTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 311
I+YEG TLVTF+YEKSRSGDITQGLPKVEQVLEVRSIDSISMN
Sbjct: 323 IIYEGDTLVTFLYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 365
>AEM44883.1 RNA polymerase beta chain, partial (plastid) [Curtisia dentata]
Length = 436
Score = 180 bits (456), Expect = 5e-53
Identities = 87/103 (84%), Positives = 96/103 (93%)
Frame = +3
Query: 3 KASTITSLGQLICENVCIAKKRPRLKSGQVILIQVDSIVIRSAKPFLATPGATVHGHYGE 182
+ STI SLGQ ICEN+CIAKK P LKSGQV+++Q+DS+VIRSAKP+LATPGATVHGHYGE
Sbjct: 233 ETSTIISLGQFICENLCIAKKGPHLKSGQVLIVQIDSVVIRSAKPYLATPGATVHGHYGE 292
Query: 183 ILYEGQTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 311
I YEG TLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSIS+N
Sbjct: 293 IRYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISLN 335
>AEM44882.1 RNA polymerase beta chain, partial (plastid) [Hydrangea sp.
DES-2011]
Length = 495
Score = 181 bits (458), Expect = 9e-53
Identities = 88/103 (85%), Positives = 95/103 (92%)
Frame = +3
Query: 3 KASTITSLGQLICENVCIAKKRPRLKSGQVILIQVDSIVIRSAKPFLATPGATVHGHYGE 182
+ STI SLG ICENVCIAK P LKSGQV+++Q+DS+VIRSAKP+LATPGATVHGHYGE
Sbjct: 288 ETSTIISLGHFICENVCIAKNGPHLKSGQVLIVQIDSVVIRSAKPYLATPGATVHGHYGE 347
Query: 183 ILYEGQTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 311
ILYEG TLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN
Sbjct: 348 ILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 390
>AKZ23951.1 RNA polymerase beta'' subunit (plastid) [Heliopsis helianthoides var.
occidentalis]
Length = 1381
Score = 186 bits (472), Expect = 1e-52
Identities = 91/103 (88%), Positives = 98/103 (95%)
Frame = +3
Query: 3 KASTITSLGQLICENVCIAKKRPRLKSGQVILIQVDSIVIRSAKPFLATPGATVHGHYGE 182
+ STI SLGQ +CENVCIAKK PRLKSGQV+++QVDS+VIRSAKP+LATPGATVHGHYGE
Sbjct: 1059 ETSTIVSLGQFLCENVCIAKKGPRLKSGQVLILQVDSVVIRSAKPYLATPGATVHGHYGE 1118
Query: 183 ILYEGQTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 311
ILYEG TLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN
Sbjct: 1119 ILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 1161
>AJE74607.1 RNA polymerase beta'' subunit (plastid) [Lygodesmia juncea]
Length = 1381
Score = 186 bits (472), Expect = 1e-52
Identities = 91/103 (88%), Positives = 97/103 (94%)
Frame = +3
Query: 3 KASTITSLGQLICENVCIAKKRPRLKSGQVILIQVDSIVIRSAKPFLATPGATVHGHYGE 182
K STI SLGQ +CENVCIAKK P LKSGQV+++QVDS+VIRSAKP+LATPGATVHGHYGE
Sbjct: 1059 KTSTIVSLGQFLCENVCIAKKGPHLKSGQVLIVQVDSVVIRSAKPYLATPGATVHGHYGE 1118
Query: 183 ILYEGQTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 311
ILYEG TLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN
Sbjct: 1119 ILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 1161
>ADX99111.1 RNA polymerase beta II subunit, partial (chloroplast) [Mulguraea
aspera]
Length = 534
Score = 181 bits (459), Expect = 1e-52
Identities = 88/101 (87%), Positives = 94/101 (93%)
Frame = +3
Query: 9 STITSLGQLICENVCIAKKRPRLKSGQVILIQVDSIVIRSAKPFLATPGATVHGHYGEIL 188
STI SLGQ ICEN+CIAK P LKSGQVIL+QVDS+VIRSAKP+LATPGATVHGHYGEIL
Sbjct: 262 STIMSLGQFICENICIAKNAPHLKSGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEIL 321
Query: 189 YEGQTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 311
Y+G TL+TFIYEKSRSGDITQGLPKVEQV EVRSIDSISMN
Sbjct: 322 YQGDTLITFIYEKSRSGDITQGLPKVEQVFEVRSIDSISMN 362
>YP_009338742.1 RNA polymerase beta'' subunit (chloroplast) [Carissa macrocarpa]
ANZ53264.1 RNA polymerase beta'' subunit (chloroplast)
[Carissa macrocarpa]
Length = 1386
Score = 186 bits (471), Expect = 1e-52
Identities = 92/103 (89%), Positives = 96/103 (93%)
Frame = +3
Query: 3 KASTITSLGQLICENVCIAKKRPRLKSGQVILIQVDSIVIRSAKPFLATPGATVHGHYGE 182
+ STI SLGQ ICENVCIAK RP LKSGQVI +QVDS+VIRSAKP+LATPGATVHGHYGE
Sbjct: 1058 ETSTIISLGQFICENVCIAKNRPHLKSGQVIFVQVDSVVIRSAKPYLATPGATVHGHYGE 1117
Query: 183 ILYEGQTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 311
ILYEG TLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN
Sbjct: 1118 ILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 1160
>YP_009309354.1 RNA polymerase beta'' subunit (chloroplast) [Pogostemon stellatus]
AKM21414.1 RNA polymerase beta'' subunit (chloroplast)
[Pogostemon stellatus]
Length = 1386
Score = 186 bits (471), Expect = 1e-52
Identities = 92/103 (89%), Positives = 96/103 (93%)
Frame = +3
Query: 3 KASTITSLGQLICENVCIAKKRPRLKSGQVILIQVDSIVIRSAKPFLATPGATVHGHYGE 182
+ STI SLGQ ICEN+CIAK P LKSGQVILIQVDS+VIRSAKPFLATPGATVHGHYGE
Sbjct: 1058 ETSTIMSLGQFICENICIAKNTPHLKSGQVILIQVDSVVIRSAKPFLATPGATVHGHYGE 1117
Query: 183 ILYEGQTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 311
ILYEG TL+TFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN
Sbjct: 1118 ILYEGDTLITFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 1160
>ADD31152.1 RNA polymerase beta'' subunit protein (chloroplast) [Ehretia
acuminata]
Length = 1381
Score = 186 bits (471), Expect = 1e-52
Identities = 93/100 (93%), Positives = 95/100 (95%)
Frame = +3
Query: 12 TITSLGQLICENVCIAKKRPRLKSGQVILIQVDSIVIRSAKPFLATPGATVHGHYGEILY 191
TI SLGQ ICENVCIAK RP LKSGQVIL+QVDSIVIRSAKP+LATPGATVHGHYGEILY
Sbjct: 1067 TIISLGQFICENVCIAKNRPHLKSGQVILVQVDSIVIRSAKPYLATPGATVHGHYGEILY 1126
Query: 192 EGQTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 311
EG TLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN
Sbjct: 1127 EGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMN 1166