BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00027275
         (3985 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP71150.1 Retrovirus-related Pol polyprotein from transposon TN...   524   0.0  
KYP77007.1 Retrovirus-related Pol polyprotein from transposon TN...   521   0.0  
AAG60117.1 copia-type polyprotein, putative [Arabidopsis thaliana]    473   0.0  
AAD50001.1 Hypothetical protein [Arabidopsis thaliana]                473   0.0  
CAB71063.1 copia-type polyprotein [Arabidopsis thaliana]              471   0.0  
KYP79141.1 Retrovirus-related Pol polyprotein from transposon TN...   523   0.0  
AAG50698.1 copia-type polyprotein, putative [Arabidopsis thalian...   461   0.0  
XP_013688817.1 PREDICTED: uncharacterized protein LOC106392554, ...   465   0.0  
AIC77183.1 polyprotein [Gossypium barbadense]                         489   0.0  
AAF16534.1 T26F17.17 [Arabidopsis thaliana]                           464   0.0  
CAB75932.1 putative protein [Arabidopsis thaliana]                    426   0.0  
GAU24969.1 hypothetical protein TSUD_312040 [Trifolium subterran...   422   0.0  
KYP50361.1 Retrovirus-related Pol polyprotein from transposon TN...   436   0.0  
KYP35753.1 Retrovirus-related Pol polyprotein from transposon TN...   436   0.0  
KYP39660.1 Retrovirus-related Pol polyprotein from transposon TN...   436   0.0  
GAU26746.1 hypothetical protein TSUD_317440 [Trifolium subterran...   432   0.0  
GAU23361.1 hypothetical protein TSUD_334080 [Trifolium subterran...   405   0.0  
GAU23220.1 hypothetical protein TSUD_172480 [Trifolium subterran...   410   0.0  
GAU16044.1 hypothetical protein TSUD_339150 [Trifolium subterran...   421   0.0  
AAG51247.1 copia-type polyprotein, putative; 28768-32772 [Arabid...   400   0.0  

>KYP71150.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1228

 Score =  524 bits (1349), Expect(3) = 0.0
 Identities = 270/473 (57%), Positives = 332/473 (70%), Gaps = 19/473 (4%)
 Frame = -3

Query: 2357 LDDKGEKCIFLGYSERTKGYKLFNPVTSVVISSRDVVLSEDESWD-STKTEKTKSILDID 2181
            LDDKGEKCIF+GYS  +K YKL+NPVT  VI SRDV   E+  WD S K +K   I    
Sbjct: 604  LDDKGEKCIFIGYSTNSKAYKLYNPVTKKVIISRDVTFDEEGMWDWSFKAQKEPVI---- 659

Query: 2180 DDPLSANNDDPDVLPSPETNSVSSISPRRNPTRTRIQHTRLQDYIVAANNVVLEEDVVNF 2001
             +P +   ++  V P+P+    SS      P R R    RL+DY+V  +N   +E+++NF
Sbjct: 660  -NPENYEEENGHVNPTPDEPETSS-----RPQRQRRLPARLEDYVVGNDNDPSDEEIINF 713

Query: 2000 ALFAGCDPLTFDEASRDDGWIQAMDAEIQAIEKNNTWKLTSLPKGKKSIGVKWVYKSKYN 1821
            ALFA C+P+TF+EAS +  W +AMD EI AIEKN TW+LT LP  KK IGVKWVYK+KY 
Sbjct: 714  ALFADCEPVTFEEASNNQYWRKAMDEEIHAIEKNQTWELTDLPADKKPIGVKWVYKTKYK 773

Query: 1820 KDNQVDKLKARLVVKGYKQKLGVDYDEVFAPVARMETIRMVIAMAAQMKWSIFQMDVKSA 1641
               ++D+LKARLVVKGYKQK G+DY EVFAPVAR++TIRM+I+++AQ  W I QMDVKSA
Sbjct: 774  SSGEIDRLKARLVVKGYKQKPGIDYFEVFAPVARLDTIRMLISLSAQNNWKIHQMDVKSA 833

Query: 1640 FLNGVLKEEVYVDQPTGYVKKGHEDKVLKLNKVLYGLKQAPQAWYTRIDSYFQ*QG---- 1473
            FLNG L+EEVYV+QP GY  KG EDKV +L K LYGLKQAP+AWY +IDSYF   G    
Sbjct: 834  FLNGTLEEEVYVEQPAGYEVKGKEDKVYRLKKALYGLKQAPRAWYKKIDSYFVDNGFQRC 893

Query: 1472 --------------NILVVCLYVDDVMFTGNNSNMLDEFNKEMTNRFEMTDTRFMSFFLG 1335
                          NIL+VCLYVDD++FTGNN  M  EF + M   FEMTD   MS+FLG
Sbjct: 894  PFEHTLYIKSVDPDNILIVCLYVDDLIFTGNNPKMFVEFREAMVKCFEMTDLGLMSYFLG 953

Query: 1334 LEVMQTTEGIFLSQKKYVGDIFKKFKMKFYNPIKTPVETRLHLNKVGKGELVNAAEYRSL 1155
            +EV Q  +GIF+SQKK+ GDI KKFKM+   PI TPVE +L L     G+ VN   Y+SL
Sbjct: 954  IEVDQRDDGIFISQKKFAGDILKKFKMENSKPISTPVEEKLKLTSDIGGKKVNPTLYKSL 1013

Query: 1154 VGSLRYLTHTRPDIVFGVGLISQFMETPSEDHLQAAKRIMRHLKGTQTHGLFY 996
            +GSLRYLT TRPDIV+GVGL+S+FME P + H QAAKRI+R++KGT T G+FY
Sbjct: 1014 IGSLRYLTATRPDIVYGVGLLSRFMEKPRDSHWQAAKRILRYIKGTLTEGIFY 1066



 Score =  401 bits (1031), Expect(3) = 0.0
 Identities = 206/434 (47%), Positives = 276/434 (63%), Gaps = 6/434 (1%)
 Frame = -1

Query: 3640 QGGFPRKTDKSIIQCFRCKVFGHYRSECK----AKFAKKHVEHSNYVELEEEEHLFFTCS 3473
            +G F  + +++   C+ C  FGH  ++C+    A  A+   +H+       +  L    +
Sbjct: 163  RGSFTNQ-ERTNFNCYHCGKFGHRAADCRFKQQANIAENQYKHTGESSDSPQTLLLVANN 221

Query: 3472 DDDDEEHLNSWYLDTGCTNHMCGNKELFLNLDESITGVVNFGNKSQVPIMG*GKVLLKLP 3293
               D +    WYLDTGC+NHMCG KELF +LDE++   V FGN S +PI+G G+V +KL 
Sbjct: 222  FSGDGD---IWYLDTGCSNHMCGKKELFFSLDETVKSTVKFGNNSNIPILGKGRVAIKLK 278

Query: 3292 --SYHFIYEVFYVPSLK*NLLSVGQLSVTGFRFIIERGVCTIETKDDEVVGTIKMTDKRL 3119
              S +FI +VFY P L  NLLS+GQLS  G+   I  G CT+  K    +  +KMT  RL
Sbjct: 279  DGSQNFISDVFYAPGLHHNLLSMGQLSEKGYNMQIHHGYCTLIDKSGRFIAKVKMTPNRL 338

Query: 3118 FRLSLEPSAQCSLSAIATDDNWLWHFRYGHXXXXXXXXXXXXNMVTGLPLLDGVDRLCQS 2939
            F L +       LS+I  +D+WLWH R+GH              V+GLP+++  + +C++
Sbjct: 339  FPLKICHEKFSCLSSIIPNDDWLWHMRFGHFHFSGLNYLSKKEYVSGLPIVNIPNGVCET 398

Query: 2938 CVRGKQHRDSFPVGKSQRAYQQLQLVHSDICGPMQTVSHGGNRDFLTFIDDYN*KIWVYL 2759
            C  GK+HR+SFP G S RA + L++VHSD+C  ++  +HGG+R F+TFIDD++ K WVY 
Sbjct: 399  CEIGKKHRESFPTGVSWRAKKLLEIVHSDLC-MVEIPTHGGSRYFITFIDDFSRKAWVYF 457

Query: 2758 LKQKSEAFGKFKEFKAYVENQSGSRLKVLRTDRGGEYTLMFLTFFYKDHGIKHQLTASYT 2579
            LKQKSEA   FK FKA+VE QSG ++K LRTDRG EY  +    F+  HGI+HQ+T  YT
Sbjct: 458  LKQKSEACDAFKSFKAFVEKQSGCKIKALRTDRGQEY--LACANFFDHHGIQHQMTTRYT 515

Query: 2578 PQQNGVSERKNRTIVEMARSMLTNKNLSKTFWAEAVCCVVYILNRCPTKSVLNMTPEEAW 2399
            PQQNGV+ERKNRTI++M R ML  K + + FWAEAV   VYILNRCPTKSV + TPEEAW
Sbjct: 516  PQQNGVAERKNRTIMDMVRCMLKAKQMPREFWAEAVSTAVYILNRCPTKSVCDKTPEEAW 575

Query: 2398 SGYKPDVTSLCIFG 2357
            SG KP +  L IFG
Sbjct: 576  SGRKPSIRHLKIFG 589



 Score =  220 bits (560), Expect(3) = 0.0
 Identities = 104/163 (63%), Positives = 130/163 (79%)
 Frame = -1

Query: 1006 GCFILQLKDSNLVGYIDSDWAGDVEDRKSTSDFVFHIGSSVVYWSSKKQQVVALSTTEAE 827
            G F  +  D NLVGY DSDWAGD+E RKSTS + F++GS  + WSSKKQQVVALST EAE
Sbjct: 1063 GIFYDKNIDVNLVGYTDSDWAGDIETRKSTSGYAFNLGSGTISWSSKKQQVVALSTAEAE 1122

Query: 826  YMAATSCASQVVWLRRLLNELHQQQYSPTTIYCDNRSAIALTKNPVFHGRSKHIDIKFHY 647
            Y+AA SCA+Q VWLRR+L  ++Q+Q +PT I+CDN+SAIAL KNPVFHGRSKHIDI+FH 
Sbjct: 1123 YIAAASCATQAVWLRRMLEVMYQKQNTPTMIFCDNKSAIALCKNPVFHGRSKHIDIRFHK 1182

Query: 646  I*DLATEGKIVLDYCNTEEKIADIFTKLLNAEVFYKLKEKLGV 518
            I +L  E ++ ++YC+TEE++ADIFTK L  E+F KLK  LG+
Sbjct: 1183 IRELVAEKEVTIEYCSTEEQVADIFTKPLKVELFCKLKRMLGM 1225


>KYP77007.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1228

 Score =  521 bits (1342), Expect(3) = 0.0
 Identities = 266/474 (56%), Positives = 331/474 (69%), Gaps = 20/474 (4%)
 Frame = -3

Query: 2357 LDDKGEKCIFLGYSERTKGYKLFNPVTSVVISSRDVVLSEDESWD-STKTEKTKSILDID 2181
            LDDKGEKCIF+GYS  +K YKL+NPVT  VI SRDV   E+  WD S K +K  ++   +
Sbjct: 604  LDDKGEKCIFIGYSTNSKAYKLYNPVTKKVIISRDVTFDEEGMWDWSFKAQKVPAV---N 660

Query: 2180 DDPLSANNDDPDVLPS-PETNSVSSISPRRNPTRTRIQHTRLQDYIVAANNVVLEEDVVN 2004
             +     N   D  P  PET+S         P R R    RL+DY+V  +N   +E+++N
Sbjct: 661  SENYEEENGHVDTTPDEPETSS--------RPQRQRRLPARLEDYVVGNDNDPSDEEIIN 712

Query: 2003 FALFAGCDPLTFDEASRDDGWIQAMDAEIQAIEKNNTWKLTSLPKGKKSIGVKWVYKSKY 1824
            FALFA C+P+TF+EAS +  W +AMD EI AIEKN TW+LT LP  K+ IGVKWVYK+KY
Sbjct: 713  FALFADCEPVTFEEASNNQYWRKAMDEEIHAIEKNQTWELTDLPANKRQIGVKWVYKTKY 772

Query: 1823 NKDNQVDKLKARLVVKGYKQKLGVDYDEVFAPVARMETIRMVIAMAAQMKWSIFQMDVKS 1644
              + ++D+ KARLV KGYKQK G+DY EVFAPVAR++TIRM+I+++AQ  W I QMDVKS
Sbjct: 773  KSNGEIDRFKARLVAKGYKQKPGIDYFEVFAPVARLDTIRMLISISAQNNWKIHQMDVKS 832

Query: 1643 AFLNGVLKEEVYVDQPTGYVKKGHEDKVLKLNKVLYGLKQAPQAWYTRIDSYFQ*QG--- 1473
            AFLNG L+EEVYV+QP GY  KG EDKV +L K LYGLKQAP+AWY +IDSYF   G   
Sbjct: 833  AFLNGTLEEEVYVEQPAGYKIKGKEDKVYRLKKALYGLKQAPRAWYKKIDSYFVDNGFQR 892

Query: 1472 ---------------NILVVCLYVDDVMFTGNNSNMLDEFNKEMTNRFEMTDTRFMSFFL 1338
                           NIL+VCLYVDD++FTGNN  M  EF + M   FEMTD   MS+FL
Sbjct: 893  CPFEHTLYIKSVDPDNILIVCLYVDDLIFTGNNPKMFAEFREAMVKSFEMTDLGLMSYFL 952

Query: 1337 GLEVMQTTEGIFLSQKKYVGDIFKKFKMKFYNPIKTPVETRLHLNKVGKGELVNAAEYRS 1158
            G+EV Q  +GIF+SQKK+ GDI KKFKM+   PI TPVE +L L    +G+ +N   Y+S
Sbjct: 953  GIEVDQRDDGIFISQKKFAGDILKKFKMENSKPISTPVEEKLKLTSNIEGKKINPTLYKS 1012

Query: 1157 LVGSLRYLTHTRPDIVFGVGLISQFMETPSEDHLQAAKRIMRHLKGTQTHGLFY 996
            L+GSLRYLT TRPDIV+GVGL+S+FME P + H QAAKRI+R++KGT T G+FY
Sbjct: 1013 LIGSLRYLTATRPDIVYGVGLLSRFMEKPRDSHWQAAKRILRYIKGTLTEGIFY 1066



 Score =  395 bits (1014), Expect(3) = 0.0
 Identities = 204/434 (47%), Positives = 277/434 (63%), Gaps = 6/434 (1%)
 Frame = -1

Query: 3640 QGGFPRKTDKSIIQCFRCKVFGHYRSECK----AKFAKKHVEHSNYVELEEEEHLFFTCS 3473
            +G F  + +++   C+ C  FGH  ++C+    A  A+   E +  +    +  L  T +
Sbjct: 163  RGSFTNQ-ERTNFNCYHCGKFGHRAADCRFKQQANIAENQYEQTGEISDNPQTLLLATNN 221

Query: 3472 DDDDEEHLNSWYLDTGCTNHMCGNKELFLNLDESITGVVNFGNKSQVPIMG*GKVLLKLP 3293
               +E     WYLDTGC+NHMCG KELF +LDE++   V FGN S +PI+G G+V ++L 
Sbjct: 222  FSGNEA---IWYLDTGCSNHMCGKKELFSSLDETVKSTVKFGNNSNIPILGKGQVAIRLK 278

Query: 3292 --SYHFIYEVFYVPSLK*NLLSVGQLSVTGFRFIIERGVCTIETKDDEVVGTIKMTDKRL 3119
              + +FI +VFY P L  NLLS+GQLS  G+   I  G C +  K+  ++  +KM+  RL
Sbjct: 279  DGTQNFISDVFYAPGLHHNLLSLGQLSEKGYNIQIHDGYCMLIDKNRRLIAKVKMSPNRL 338

Query: 3118 FRLSLEPSAQCSLSAIATDDNWLWHFRYGHXXXXXXXXXXXXNMVTGLPLLDGVDRLCQS 2939
            F L+++      LS+I  +D+WLWH R+GH              V+GLP+++    +C++
Sbjct: 339  FPLNVQYDKIPCLSSIIQNDDWLWHMRFGHYHFSGLNFLSRKEYVSGLPVINIPKGICET 398

Query: 2938 CVRGKQHRDSFPVGKSQRAYQQLQLVHSDICGPMQTVSHGGNRDFLTFIDDYN*KIWVYL 2759
            C  GK+HR+SFP GKS RA + L++VHSD+C  ++  SHGG+R F+TFIDD++ K WVY 
Sbjct: 399  CEIGKKHRESFPTGKSWRARKPLEIVHSDLC-MVEIPSHGGSRYFITFIDDFSRKSWVYF 457

Query: 2758 LKQKSEAFGKFKEFKAYVENQSGSRLKVLRTDRGGEYTLMFLTFFYKDHGIKHQLTASYT 2579
            LKQKSEA   FK FKA VE QS  ++K LRTDRG EY  +    F   HGI+HQ+T  YT
Sbjct: 458  LKQKSEACDAFKSFKALVEKQSSCKIKALRTDRGQEY--LACADFIDHHGIQHQMTTRYT 515

Query: 2578 PQQNGVSERKNRTIVEMARSMLTNKNLSKTFWAEAVCCVVYILNRCPTKSVLNMTPEEAW 2399
            PQQNGV+ERKNRTI++M R ML  K + + FWAEAV   VYILNRCPTKSV + TPEEAW
Sbjct: 516  PQQNGVAERKNRTIMDMVRCMLKAKQMPREFWAEAVSTAVYILNRCPTKSVCDKTPEEAW 575

Query: 2398 SGYKPDVTSLCIFG 2357
            SG KP +  L IFG
Sbjct: 576  SGRKPSIRHLRIFG 589



 Score =  222 bits (565), Expect(3) = 0.0
 Identities = 104/155 (67%), Positives = 130/155 (83%)
 Frame = -1

Query: 982  DSNLVGYIDSDWAGDVEDRKSTSDFVFHIGSSVVYWSSKKQQVVALSTTEAEYMAATSCA 803
            D NLVGY DSDWAGD+E RKSTS + F++GS  + WSSKKQQVVALST EAEY+AA SCA
Sbjct: 1071 DVNLVGYTDSDWAGDIETRKSTSGYAFNLGSGTISWSSKKQQVVALSTAEAEYIAAASCA 1130

Query: 802  SQVVWLRRLLNELHQQQYSPTTIYCDNRSAIALTKNPVFHGRSKHIDIKFHYI*DLATEG 623
            +Q VWLRR+L  +HQ+Q +PT I+CDN+SAIA+ KN VFH RSKHIDI+FH I +L TE 
Sbjct: 1131 TQAVWLRRMLEVMHQKQDNPTVIFCDNKSAIAICKNLVFHERSKHIDIRFHKIRELVTEK 1190

Query: 622  KIVLDYCNTEEKIADIFTKLLNAEVFYKLKEKLGV 518
            +++++YC+TEE+IADIFTK L AE+FYKLK+ LG+
Sbjct: 1191 EVLINYCHTEEQIADIFTKPLKAELFYKLKKMLGM 1225


>AAG60117.1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  473 bits (1216), Expect(3) = 0.0
 Identities = 242/488 (49%), Positives = 324/488 (66%), Gaps = 24/488 (4%)
 Frame = -3

Query: 2357 LDDKGEKCIFLGYSERTKGYKLFNPVTSVVISSRDVVLSEDESWDSTKTEKTKSILDI-- 2184
            LDDK EK IF+GY   +KGYKL+NP T   I SR++V  E+  WD    E+  +      
Sbjct: 713  LDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFE 772

Query: 2183 DDDPLSANNDDPDVLP-----SPETNSVSSISPRRNPTRTRIQHTRLQDYIVAANNVVLE 2019
            +D+P     + P   P     SP ++ +   S  R P    IQ      Y V  N    +
Sbjct: 773  EDEPEPTREEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQEL----YEVTEN----Q 824

Query: 2018 EDVVNFALFAGCDPLTFDEASRDDGWIQAMDAEIQAIEKNNTWKLTSLPKGKKSIGVKWV 1839
            E++  F LFA C+P+ F EA     W  AMD EI++I+KN+TW+LTSLP G K+IGVKWV
Sbjct: 825  ENLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWV 884

Query: 1838 YKSKYNKDNQVDKLKARLVVKGYKQKLGVDYDEVFAPVARMETIRMVIAMAAQMKWSIFQ 1659
            YK+K N   +V++ KARLV KGY Q+ G+DYDEVFAPVAR+ET+R++I++AAQ KW I Q
Sbjct: 885  YKAKKNSKGEVERYKARLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQ 944

Query: 1658 MDVKSAFLNGVLKEEVYVDQPTGYVKKGHEDKVLKLNKVLYGLKQAPQAWYTRIDSYFQ* 1479
            MDVKSAFLNG L+EEVY++QP GY+ KG EDKVL+L K LYGLKQAP+AW TRID YF+ 
Sbjct: 945  MDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKE 1004

Query: 1478 QG-----------------NILVVCLYVDDVMFTGNNSNMLDEFNKEMTNRFEMTDTRFM 1350
            +                  +IL+ CLYVDD++FTGNN +M +EF KEMT  FEMTD   M
Sbjct: 1005 KDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLM 1064

Query: 1349 SFFLGLEVMQTTEGIFLSQKKYVGDIFKKFKMKFYNPIKTPVETRLHLNKVGKGELVNAA 1170
            S++LG+EV Q   GIF++Q+ Y  ++ KKFKM   NP+ TP+E  + L+K  +GE V+  
Sbjct: 1065 SYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPT 1124

Query: 1169 EYRSLVGSLRYLTHTRPDIVFGVGLISQFMETPSEDHLQAAKRIMRHLKGTQTHGLFYTS 990
             ++SLVGSLRYLT TRPDI++ VG++S++ME P+  H +AAKRI+R++KGT   GL Y++
Sbjct: 1125 TFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYST 1184

Query: 989  VKRFQSGG 966
               ++  G
Sbjct: 1185 TSDYKLVG 1192



 Score =  459 bits (1181), Expect(3) = 0.0
 Identities = 242/580 (41%), Positives = 349/580 (60%), Gaps = 37/580 (6%)
 Frame = -1

Query: 3985 FESLSMNESEVISDYFTRVQTVVNELRSNGEILADTRIVEKIMRSLTEPFDYVVVAIEEG 3806
            FE+L M E E++SDYF+RV TV N L+ NGE L D RI+EK++RSL   F+++V  IEE 
Sbjct: 120  FEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEET 179

Query: 3805 KYMSSLTIDGLKGSLSAYEFRMKHRKPCSLEHALRSKVVITXXXXXXXXXXSTPAQG--- 3635
            K + ++TI+ L GSL AYE + K +K   +E  L  ++                 +G   
Sbjct: 180  KDLEAMTIEQLLGSLQAYEEKKK-KKEDIIEQVLNMQITKEENGQSYQRRGGGQVRGRGR 238

Query: 3634 -----------------------------GFPR-KTDKSIIQCFRCKVFGHYRSECKAKF 3545
                                         G P+ + DKS ++C+ C  FGHY SECKA  
Sbjct: 239  GGYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPS 298

Query: 3544 AKKHVEHSNYVE--LEEEEHLFFTCSDDDDEEHLNSWYLDTGCTNHMCGNKELFLNLDES 3371
             KK  E +NYVE  ++EE+ L       D++E  + WYLD+G +NHMCG K +F  LDES
Sbjct: 299  NKKFEEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDES 358

Query: 3370 ITGVVNFGNKSQVPIMG*GKVLLKLPS--YHFIYEVFYVPSLK*NLLSVGQLSVTGFRFI 3197
            + G V  G++S++ + G G +L++L +  + FI  V+Y+PS+K N+LS+GQL   G+   
Sbjct: 359  VRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIR 418

Query: 3196 IERGVCTIETKDDEVVGTIKMTDKRLFRLSLEPSAQCSLSAIATDDNWLWHFRYGHXXXX 3017
            ++    +I  ++  ++  + M+  R+F L++       L     +++WLWH R+GH    
Sbjct: 419  LKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFG 478

Query: 3016 XXXXXXXXNMVTGLPLLDGVDRLCQSCVRGKQHRDSFPVGKSQRAYQQLQLVHSDICGPM 2837
                     MV GLP ++  +++C+ C+ GKQ + SFP   S RA + L+L+H+D+CGP+
Sbjct: 479  GLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKSLELIHTDVCGPI 538

Query: 2836 QTVSHGGNRDFLTFIDDYN*KIWVYLLKQKSEAFGKFKEFKAYVENQSGSRLKVLRTDRG 2657
            +  S G +  FL FIDD++ K WVY LK+KSE F  FK+FKA+VE +SG  +K +R+DRG
Sbjct: 539  KPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRG 598

Query: 2656 GEYTLMFLTFFYKDHGIKHQLTASYTPQQNGVSERKNRTIVEMARSMLTNKNLSKTFWAE 2477
            GE+T      + +D+GI+ QLT   +PQQNGV+ERKNRTI+EMARSML +K L K  WAE
Sbjct: 599  GEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAE 658

Query: 2476 AVCCVVYILNRCPTKSVLNMTPEEAWSGYKPDVTSLCIFG 2357
            AV C VY+LNR PTKSV   TP+EAWSG K  V+ L +FG
Sbjct: 659  AVACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRVFG 698



 Score =  188 bits (477), Expect(3) = 0.0
 Identities = 91/159 (57%), Positives = 112/159 (70%)
 Frame = -1

Query: 982  DSNLVGYIDSDWAGDVEDRKSTSDFVFHIGSSVVYWSSKKQQVVALSTTEAEYMAATSCA 803
            D  LVGY DSDW GDV+DRKSTS FVF+IG +   W SKKQ +V LST EAEY+AATSC 
Sbjct: 1187 DYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVAATSCV 1246

Query: 802  SQVVWLRRLLNELHQQQYSPTTIYCDNRSAIALTKNPVFHGRSKHIDIKFHYI*DLATEG 623
               +WLR LL EL   Q  PT I+ DN+SAIAL KNPVFH RSKHID ++HYI +  ++ 
Sbjct: 1247 CHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKK 1306

Query: 622  KIVLDYCNTEEKIADIFTKLLNAEVFYKLKEKLGVHNSN 506
             + L+Y  T +++ADIFTK L  E F K++  LGV  S+
Sbjct: 1307 DVQLEYVKTHDQVADIFTKPLKREDFIKMRSLLGVAKSS 1345


>AAD50001.1 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  473 bits (1217), Expect(3) = 0.0
 Identities = 241/488 (49%), Positives = 326/488 (66%), Gaps = 24/488 (4%)
 Frame = -3

Query: 2357 LDDKGEKCIFLGYSERTKGYKLFNPVTSVVISSRDVVLSEDESWDSTKTEKTKSILDI-- 2184
            LDDK EK IF+GY   +KGYKL+NP T   I SR++V  E+  WD    E+  +      
Sbjct: 713  LDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFE 772

Query: 2183 DDDPLSANNDDPDVLP-----SPETNSVSSISPRRNPTRTRIQHTRLQDYIVAANNVVLE 2019
            +D+P     + P   P     SP ++ +   S  R P    IQ      Y V  N    +
Sbjct: 773  EDEPEPTREEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQEL----YEVTEN----Q 824

Query: 2018 EDVVNFALFAGCDPLTFDEASRDDGWIQAMDAEIQAIEKNNTWKLTSLPKGKKSIGVKWV 1839
            E++  F LFA C+P+ F +A     W  AMD EI++I+KN+TW+LTSLP G K+IGVKWV
Sbjct: 825  ENLTLFCLFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWV 884

Query: 1838 YKSKYNKDNQVDKLKARLVVKGYKQKLGVDYDEVFAPVARMETIRMVIAMAAQMKWSIFQ 1659
            YK+K N   +V++ KARLV KGY Q++G+DYDEVFAPVAR+ET+R++I++AAQ KW I Q
Sbjct: 885  YKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQ 944

Query: 1658 MDVKSAFLNGVLKEEVYVDQPTGYVKKGHEDKVLKLNKVLYGLKQAPQAWYTRIDSYFQ* 1479
            MDVKSAFLNG L+EEVY++QP GY+ KG EDKVL+L KVLYGLKQAP+AW TRID YF+ 
Sbjct: 945  MDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKE 1004

Query: 1478 QG-----------------NILVVCLYVDDVMFTGNNSNMLDEFNKEMTNRFEMTDTRFM 1350
            +                  +IL+ CLYVDD++FTGNN ++ +EF KEMT  FEMTD   M
Sbjct: 1005 KDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLM 1064

Query: 1349 SFFLGLEVMQTTEGIFLSQKKYVGDIFKKFKMKFYNPIKTPVETRLHLNKVGKGELVNAA 1170
            S++LG+EV Q   GIF++Q+ Y  ++ KKFKM   NP+ TP+E  + L+K  +GE V+  
Sbjct: 1065 SYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPT 1124

Query: 1169 EYRSLVGSLRYLTHTRPDIVFGVGLISQFMETPSEDHLQAAKRIMRHLKGTQTHGLFYTS 990
             ++SLVGSLRYLT TRPDI++ VG++S++ME P+  H +AAKRI+R++KGT   GL Y++
Sbjct: 1125 TFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYST 1184

Query: 989  VKRFQSGG 966
               ++  G
Sbjct: 1185 TSDYKLVG 1192



 Score =  459 bits (1180), Expect(3) = 0.0
 Identities = 242/580 (41%), Positives = 349/580 (60%), Gaps = 37/580 (6%)
 Frame = -1

Query: 3985 FESLSMNESEVISDYFTRVQTVVNELRSNGEILADTRIVEKIMRSLTEPFDYVVVAIEEG 3806
            FE+L M E E++SDYF+RV TV N L+ NGE L D RI+EK++RSL   F+++V  IEE 
Sbjct: 120  FEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEET 179

Query: 3805 KYMSSLTIDGLKGSLSAYEFRMKHRKPCSLEHALRSKVVITXXXXXXXXXXSTPAQG--- 3635
            K + ++TI+ L GSL AYE + K +K   +E  L  ++                 +G   
Sbjct: 180  KDLEAMTIEQLLGSLQAYEEKKK-KKEDIVEQVLNMQITKEENGQSYQRRGGGQVRGRGR 238

Query: 3634 -----------------------------GFPR-KTDKSIIQCFRCKVFGHYRSECKAKF 3545
                                         G P+ + DKS ++C+ C  FGHY SECKA  
Sbjct: 239  GGYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPS 298

Query: 3544 AKKHVEHSNYVE--LEEEEHLFFTCSDDDDEEHLNSWYLDTGCTNHMCGNKELFLNLDES 3371
             KK  E +NYVE  ++EE+ L       D+++  + WYLD+G +NHMCG K +F  LDES
Sbjct: 299  NKKFEEKANYVEEKIQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDES 358

Query: 3370 ITGVVNFGNKSQVPIMG*GKVLLKLPS--YHFIYEVFYVPSLK*NLLSVGQLSVTGFRFI 3197
            + G V  G++S++ + G G +L++L +  + FI  V+Y+PS+K N+LS+GQL   G+   
Sbjct: 359  VRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIR 418

Query: 3196 IERGVCTIETKDDEVVGTIKMTDKRLFRLSLEPSAQCSLSAIATDDNWLWHFRYGHXXXX 3017
            ++    +I  ++  ++  + M+  R+F L++       L     +++WLWH R+GH    
Sbjct: 419  LKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFG 478

Query: 3016 XXXXXXXXNMVTGLPLLDGVDRLCQSCVRGKQHRDSFPVGKSQRAYQQLQLVHSDICGPM 2837
                     MV GLP ++  +++C+ C+ GKQ + SFP   S RA + L+L+H+D+CGP+
Sbjct: 479  GLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPI 538

Query: 2836 QTVSHGGNRDFLTFIDDYN*KIWVYLLKQKSEAFGKFKEFKAYVENQSGSRLKVLRTDRG 2657
            +  S G +  FL FIDD++ K WVY LK+KSE F  FK+FKA+VE +SG  +K +R+DRG
Sbjct: 539  KPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRG 598

Query: 2656 GEYTLMFLTFFYKDHGIKHQLTASYTPQQNGVSERKNRTIVEMARSMLTNKNLSKTFWAE 2477
            GE+T      + +D+GI+ QLT   +PQQNGV ERKNRTI+EMARSML +K L K  WAE
Sbjct: 599  GEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAE 658

Query: 2476 AVCCVVYILNRCPTKSVLNMTPEEAWSGYKPDVTSLCIFG 2357
            AV C VY+LNR PTKSV   TP+EAWSG KP V+ L +FG
Sbjct: 659  AVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFG 698



 Score =  186 bits (473), Expect(3) = 0.0
 Identities = 90/159 (56%), Positives = 111/159 (69%)
 Frame = -1

Query: 982  DSNLVGYIDSDWAGDVEDRKSTSDFVFHIGSSVVYWSSKKQQVVALSTTEAEYMAATSCA 803
            D  LVGY DSDW GDV+DRKSTS FVF+IG +   W SKKQ +V LST EAEY+AATSC 
Sbjct: 1187 DYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCV 1246

Query: 802  SQVVWLRRLLNELHQQQYSPTTIYCDNRSAIALTKNPVFHGRSKHIDIKFHYI*DLATEG 623
               +WLR LL EL   Q  PT I+ DN+SAIAL KNPVFH RSKHID ++HYI +  ++ 
Sbjct: 1247 CHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKK 1306

Query: 622  KIVLDYCNTEEKIADIFTKLLNAEVFYKLKEKLGVHNSN 506
             + L+Y  T +++AD FTK L  E F K++  LGV  S+
Sbjct: 1307 DVQLEYVKTHDQVADFFTKPLKRENFIKMRSLLGVAKSS 1345


>CAB71063.1 copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  471 bits (1213), Expect(3) = 0.0
 Identities = 240/488 (49%), Positives = 326/488 (66%), Gaps = 24/488 (4%)
 Frame = -3

Query: 2357 LDDKGEKCIFLGYSERTKGYKLFNPVTSVVISSRDVVLSEDESWDSTKTEKTKSILDI-- 2184
            LDDK EK IF+GY   +KGYKL+NP T   I SR++V  E+  WD    E+  +      
Sbjct: 713  LDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFE 772

Query: 2183 DDDPLSANNDDPDVLP-----SPETNSVSSISPRRNPTRTRIQHTRLQDYIVAANNVVLE 2019
            +D+P     + P   P     SP ++ +   S  R P    IQ      Y V  N    +
Sbjct: 773  EDEPEPTREEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQEL----YEVTEN----Q 824

Query: 2018 EDVVNFALFAGCDPLTFDEASRDDGWIQAMDAEIQAIEKNNTWKLTSLPKGKKSIGVKWV 1839
            E++  F LFA C+P+ F +A     W  AMD EI++I+KN+TW+LTSLP G K+IGVKWV
Sbjct: 825  ENLTLFCLFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWV 884

Query: 1838 YKSKYNKDNQVDKLKARLVVKGYKQKLGVDYDEVFAPVARMETIRMVIAMAAQMKWSIFQ 1659
            YK+K N   +V++ KARLV KGY Q++G+DYDEVFAPVAR+ET+R++I++AAQ KW I Q
Sbjct: 885  YKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQ 944

Query: 1658 MDVKSAFLNGVLKEEVYVDQPTGYVKKGHEDKVLKLNKVLYGLKQAPQAWYTRIDSYFQ* 1479
            MDVKSAFLNG L+EEVY++QP GY+ KG EDKVL+L KVLYGLKQAP+AW TRID YF+ 
Sbjct: 945  MDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKE 1004

Query: 1478 QG-----------------NILVVCLYVDDVMFTGNNSNMLDEFNKEMTNRFEMTDTRFM 1350
            +                  +IL+ CLYVDD++FTGNN ++ +EF KEMT  FEMTD   M
Sbjct: 1005 KDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLM 1064

Query: 1349 SFFLGLEVMQTTEGIFLSQKKYVGDIFKKFKMKFYNPIKTPVETRLHLNKVGKGELVNAA 1170
            S++LG+EV Q   GIF++Q+ Y  ++ KKFK+   NP+ TP+E  + L+K  +GE V+  
Sbjct: 1065 SYYLGIEVKQEDNGIFITQEGYAKEVLKKFKIDDSNPVCTPMECGIKLSKKEEGEGVDPT 1124

Query: 1169 EYRSLVGSLRYLTHTRPDIVFGVGLISQFMETPSEDHLQAAKRIMRHLKGTQTHGLFYTS 990
             ++SLVGSLRYLT TRPDI++ VG++S++ME P+  H +AAKRI+R++KGT   GL Y++
Sbjct: 1125 TFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYST 1184

Query: 989  VKRFQSGG 966
               ++  G
Sbjct: 1185 TSDYKLVG 1192



 Score =  456 bits (1174), Expect(3) = 0.0
 Identities = 240/580 (41%), Positives = 349/580 (60%), Gaps = 37/580 (6%)
 Frame = -1

Query: 3985 FESLSMNESEVISDYFTRVQTVVNELRSNGEILADTRIVEKIMRSLTEPFDYVVVAIEEG 3806
            FE+L M E E++SDYF+RV TV N L+ NGE L D RI+EK++RSL   F+++V  IEE 
Sbjct: 120  FEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEET 179

Query: 3805 KYMSSLTIDGLKGSLSAYEFRMKHRKPCSLEHALRSKVVITXXXXXXXXXXSTPAQG--- 3635
            K + ++TI+ L GSL AYE + K ++  + E  L  ++                 +G   
Sbjct: 180  KDLEAMTIEQLLGSLQAYEEKKKKKEDIA-EQVLNMQITKEENGQSYQRRGGGQVRGRGR 238

Query: 3634 -----------------------------GFPR-KTDKSIIQCFRCKVFGHYRSECKAKF 3545
                                         G P+ + DKS ++C+ C  FGHY SECKA  
Sbjct: 239  GGYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPS 298

Query: 3544 AKKHVEHSNYVE--LEEEEHLFFTCSDDDDEEHLNSWYLDTGCTNHMCGNKELFLNLDES 3371
             KK  E ++YVE  ++EE+ L       D+++  + WYLD+G +NHMCG K +F  LDES
Sbjct: 299  NKKFEEKAHYVEEKIQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDES 358

Query: 3370 ITGVVNFGNKSQVPIMG*GKVLLKLPS--YHFIYEVFYVPSLK*NLLSVGQLSVTGFRFI 3197
            + G V  G++S++ + G G +L++L +  + FI  V+Y+PS+K N+LS+GQL   G+   
Sbjct: 359  VRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIR 418

Query: 3196 IERGVCTIETKDDEVVGTIKMTDKRLFRLSLEPSAQCSLSAIATDDNWLWHFRYGHXXXX 3017
            ++    +I  ++  ++  + M+  R+F L++       L     +++WLWH R+GH    
Sbjct: 419  LKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFG 478

Query: 3016 XXXXXXXXNMVTGLPLLDGVDRLCQSCVRGKQHRDSFPVGKSQRAYQQLQLVHSDICGPM 2837
                     MV GLP ++  +++C+ C+ GKQ + SFP   S RA + L+L+H+D+CGP+
Sbjct: 479  GLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPI 538

Query: 2836 QTVSHGGNRDFLTFIDDYN*KIWVYLLKQKSEAFGKFKEFKAYVENQSGSRLKVLRTDRG 2657
            +  S G +  FL FIDD++ K WVY LK+KSE F  FK+FKA+VE +SG  +K +R+DRG
Sbjct: 539  KPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRG 598

Query: 2656 GEYTLMFLTFFYKDHGIKHQLTASYTPQQNGVSERKNRTIVEMARSMLTNKNLSKTFWAE 2477
            GE+T      + +D+GI+ QLT   +PQQNGV ERKNRTI+EMARSML +K L K  WAE
Sbjct: 599  GEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAE 658

Query: 2476 AVCCVVYILNRCPTKSVLNMTPEEAWSGYKPDVTSLCIFG 2357
            AV C VY+LNR PTKSV   TP+EAWSG KP V+ L +FG
Sbjct: 659  AVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFG 698



 Score =  186 bits (473), Expect(3) = 0.0
 Identities = 90/159 (56%), Positives = 111/159 (69%)
 Frame = -1

Query: 982  DSNLVGYIDSDWAGDVEDRKSTSDFVFHIGSSVVYWSSKKQQVVALSTTEAEYMAATSCA 803
            D  LVGY DSDW GDV+DRKSTS FVF+IG +   W SKKQ +V LST EAEY+AATSC 
Sbjct: 1187 DYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCV 1246

Query: 802  SQVVWLRRLLNELHQQQYSPTTIYCDNRSAIALTKNPVFHGRSKHIDIKFHYI*DLATEG 623
               +WLR LL EL   Q  PT I+ DN+SAIAL KNPVFH RSKHID ++HYI +  ++ 
Sbjct: 1247 CHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKK 1306

Query: 622  KIVLDYCNTEEKIADIFTKLLNAEVFYKLKEKLGVHNSN 506
             + L+Y  T +++AD FTK L  E F K++  LGV  S+
Sbjct: 1307 DVQLEYVKTHDQVADFFTKPLKRENFIKMRSLLGVAKSS 1345


>KYP79141.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 990

 Score =  523 bits (1346), Expect(3) = 0.0
 Identities = 269/473 (56%), Positives = 332/473 (70%), Gaps = 19/473 (4%)
 Frame = -3

Query: 2357 LDDKGEKCIFLGYSERTKGYKLFNPVTSVVISSRDVVLSEDESWD-STKTEKTKSILDID 2181
            LDDKGEKCIF+GYS  +K YKL+NPVT  VI SRDV   E+  WD S K +K   I    
Sbjct: 366  LDDKGEKCIFIGYSTNSKAYKLYNPVTKKVIISRDVTFDEEGMWDWSFKAQKEPVI---- 421

Query: 2180 DDPLSANNDDPDVLPSPETNSVSSISPRRNPTRTRIQHTRLQDYIVAANNVVLEEDVVNF 2001
             +P +   ++  V P+P+    SS      P R R    RL+DY+V  +N   +E+++NF
Sbjct: 422  -NPENYEEENGHVNPTPDEPETSS-----RPQRQRRLPARLEDYVVGNDNDPSDEEIINF 475

Query: 2000 ALFAGCDPLTFDEASRDDGWIQAMDAEIQAIEKNNTWKLTSLPKGKKSIGVKWVYKSKYN 1821
            ALFA C+P+TF+EAS +  W +AMD EI AIEKN TW+LT LP  KK IGVKWVYK+KY 
Sbjct: 476  ALFADCEPVTFEEASNNQYWRKAMDEEIHAIEKNQTWELTDLPADKKPIGVKWVYKTKYK 535

Query: 1820 KDNQVDKLKARLVVKGYKQKLGVDYDEVFAPVARMETIRMVIAMAAQMKWSIFQMDVKSA 1641
               ++D+LKARLVVKGYKQK G+DY EVFAPVAR++TIRM+I+++AQ  W I QMDVKSA
Sbjct: 536  SSGEIDRLKARLVVKGYKQKPGIDYFEVFAPVARLDTIRMLISLSAQNNWKIHQMDVKSA 595

Query: 1640 FLNGVLKEEVYVDQPTGYVKKGHEDKVLKLNKVLYGLKQAPQAWYTRIDSYFQ*QG---- 1473
            FLNG L+EEVYV+QP GY  KG EDKV +L K LYGLKQAP+AWY +IDSYF   G    
Sbjct: 596  FLNGTLEEEVYVEQPAGYEVKGKEDKVYRLKKALYGLKQAPRAWYKKIDSYFVNNGFQKC 655

Query: 1472 --------------NILVVCLYVDDVMFTGNNSNMLDEFNKEMTNRFEMTDTRFMSFFLG 1335
                          NIL+VCLYVDD++FTGNN  M  +F + M   FEMTD   MS+FLG
Sbjct: 656  PFEHTLYIKSVDLDNILIVCLYVDDLIFTGNNPKMFAKFREAMAKCFEMTDLGLMSYFLG 715

Query: 1334 LEVMQTTEGIFLSQKKYVGDIFKKFKMKFYNPIKTPVETRLHLNKVGKGELVNAAEYRSL 1155
            +EV Q  +GIF+SQKK+ GDI KKFKM+   PI TPVE +L L     G+ VN   Y+SL
Sbjct: 716  IEVDQRDDGIFISQKKFAGDILKKFKMENSKPISTPVEEKLKLTSDIGGKKVNPTLYKSL 775

Query: 1154 VGSLRYLTHTRPDIVFGVGLISQFMETPSEDHLQAAKRIMRHLKGTQTHGLFY 996
            +GSLRYLT TRPDIV+GVGL+S+FME P + H QAAKRI+R++KGT T G+FY
Sbjct: 776  IGSLRYLTATRPDIVYGVGLLSRFMEKPRDSHWQAAKRILRYIKGTLTEGIFY 828



 Score =  365 bits (938), Expect(3) = 0.0
 Identities = 184/354 (51%), Positives = 238/354 (67%), Gaps = 2/354 (0%)
 Frame = -1

Query: 3412 MCGNKELFLNLDESITGVVNFGNKSQVPIMG*GKVLLKLP--SYHFIYEVFYVPSLK*NL 3239
            MCG KELF +LDE++   V FGN S +PI+G G+V +KL   S +FI +VFY P L  NL
Sbjct: 1    MCGKKELFFSLDETVKSTVKFGNNSNIPILGKGRVAIKLKDGSQNFISDVFYAPGLHHNL 60

Query: 3238 LSVGQLSVTGFRFIIERGVCTIETKDDEVVGTIKMTDKRLFRLSLEPSAQCSLSAIATDD 3059
            LS+GQLS  G+   I  G CT+  K    +  +KMT  RLF L +       LS+I  +D
Sbjct: 61   LSMGQLSEKGYNMQIHHGYCTLIDKSGRFIAKVKMTPNRLFPLKICHEKFSCLSSIIPND 120

Query: 3058 NWLWHFRYGHXXXXXXXXXXXXNMVTGLPLLDGVDRLCQSCVRGKQHRDSFPVGKSQRAY 2879
            +WLWH R+GH              V+GLP+++  + +C++C  GK+HR+SFP G S RA 
Sbjct: 121  DWLWHMRFGHFHFSGLNYLSKKEYVSGLPIVNIPNGVCETCEIGKKHRESFPTGVSWRAK 180

Query: 2878 QQLQLVHSDICGPMQTVSHGGNRDFLTFIDDYN*KIWVYLLKQKSEAFGKFKEFKAYVEN 2699
            + L++VHSD+C  ++  +HGG+R F+TFIDD++ K WVY LKQKSEA   FK FKA+VE 
Sbjct: 181  KLLEIVHSDLC-MVEIPTHGGSRYFITFIDDFSRKAWVYFLKQKSEACDAFKSFKAFVEK 239

Query: 2698 QSGSRLKVLRTDRGGEYTLMFLTFFYKDHGIKHQLTASYTPQQNGVSERKNRTIVEMARS 2519
            QSG ++K LRTDRG EY  +    F+  HGI+HQ+T  YTPQQNGV+ERKNRTI++M R 
Sbjct: 240  QSGCKIKALRTDRGQEY--LACANFFDHHGIQHQMTTRYTPQQNGVAERKNRTIMDMVRC 297

Query: 2518 MLTNKNLSKTFWAEAVCCVVYILNRCPTKSVLNMTPEEAWSGYKPDVTSLCIFG 2357
            ML  K + + FWAEAV   VYILNRCPTKSV + TPEEAWSG KP +  L IFG
Sbjct: 298  MLKAKQMPREFWAEAVSTAVYILNRCPTKSVCDKTPEEAWSGRKPSIRHLKIFG 351



 Score =  220 bits (560), Expect(3) = 0.0
 Identities = 104/163 (63%), Positives = 130/163 (79%)
 Frame = -1

Query: 1006 GCFILQLKDSNLVGYIDSDWAGDVEDRKSTSDFVFHIGSSVVYWSSKKQQVVALSTTEAE 827
            G F  +  D NLVGY DSDWAGD+E RKSTS + F++GS  + WSSKKQQVVALST EAE
Sbjct: 825  GIFYDKNIDVNLVGYTDSDWAGDIETRKSTSGYAFNLGSGTISWSSKKQQVVALSTAEAE 884

Query: 826  YMAATSCASQVVWLRRLLNELHQQQYSPTTIYCDNRSAIALTKNPVFHGRSKHIDIKFHY 647
            Y+AA SCA+Q VWLRR+L  ++Q+Q +PT I+CDN+SAIAL KNPVFHGRSKHIDI+FH 
Sbjct: 885  YIAAASCATQAVWLRRMLEVMYQKQNTPTMIFCDNKSAIALCKNPVFHGRSKHIDIRFHK 944

Query: 646  I*DLATEGKIVLDYCNTEEKIADIFTKLLNAEVFYKLKEKLGV 518
            I +L  E ++ ++YC+TEE++ADIFTK L  E+F KLK  LG+
Sbjct: 945  IRELVAEKEVTIEYCSTEEQVADIFTKPLKVELFCKLKRMLGM 987


>AAG50698.1 copia-type polyprotein, putative [Arabidopsis thaliana] AAG50765.1
            copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  461 bits (1187), Expect(3) = 0.0
 Identities = 243/580 (41%), Positives = 350/580 (60%), Gaps = 37/580 (6%)
 Frame = -1

Query: 3985 FESLSMNESEVISDYFTRVQTVVNELRSNGEILADTRIVEKIMRSLTEPFDYVVVAIEEG 3806
            FE+L M E E++SDYF+RV TV N L+ NGE L D RI+EK++RSL   F+++V  IEE 
Sbjct: 120  FEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEET 179

Query: 3805 KYMSSLTIDGLKGSLSAYEFRMKHRKPCSLEHALRSKVVITXXXXXXXXXXSTPAQG--- 3635
            K + ++TI+ L GSL AYE + K +K   +E  L  ++                 +G   
Sbjct: 180  KDLEAMTIEQLLGSLQAYEEKKK-KKEDIVEQVLNMQITKEENGQSYQRRGGGQVRGRGR 238

Query: 3634 -----------------------------GFPR-KTDKSIIQCFRCKVFGHYRSECKAKF 3545
                                         G P+ + DKS ++C+ C  FGHY SECKA  
Sbjct: 239  GGYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPS 298

Query: 3544 AKKHVEHSNYVE--LEEEEHLFFTCSDDDDEEHLNSWYLDTGCTNHMCGNKELFLNLDES 3371
             KK  E +NYVE  ++EE+ L       D++E  + WYLD+G +NHMCG K +F  LDES
Sbjct: 299  NKKFEEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDES 358

Query: 3370 ITGVVNFGNKSQVPIMG*GKVLLKLPS--YHFIYEVFYVPSLK*NLLSVGQLSVTGFRFI 3197
            + G V  G++S++ + G G +L++L +  + FI  V+Y+PS+K N+LS+GQL   G+   
Sbjct: 359  VRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIR 418

Query: 3196 IERGVCTIETKDDEVVGTIKMTDKRLFRLSLEPSAQCSLSAIATDDNWLWHFRYGHXXXX 3017
            ++    +I  ++  ++  + M+  R+F L++       L     +++WLWH R+GH    
Sbjct: 419  LKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFG 478

Query: 3016 XXXXXXXXNMVTGLPLLDGVDRLCQSCVRGKQHRDSFPVGKSQRAYQQLQLVHSDICGPM 2837
                     MV GLP ++  +++C+ C+ GKQ + SFP   S RA + L+L+H+D+CGP+
Sbjct: 479  GLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPI 538

Query: 2836 QTVSHGGNRDFLTFIDDYN*KIWVYLLKQKSEAFGKFKEFKAYVENQSGSRLKVLRTDRG 2657
            +  S G +  FL FIDD++ K WVY LK+KSE F  FK+FKA+VE +SG  +K +R+DRG
Sbjct: 539  KPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRG 598

Query: 2656 GEYTLMFLTFFYKDHGIKHQLTASYTPQQNGVSERKNRTIVEMARSMLTNKNLSKTFWAE 2477
            GE+T      + +D+GI+ QLT   +PQQNGV+ERKNRTI+EMARSML +K L K  WAE
Sbjct: 599  GEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAE 658

Query: 2476 AVCCVVYILNRCPTKSVLNMTPEEAWSGYKPDVTSLCIFG 2357
            AV C VY+LNR PTKSV   TP+EAWSG KP V+ L +FG
Sbjct: 659  AVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFG 698



 Score =  453 bits (1166), Expect(3) = 0.0
 Identities = 232/482 (48%), Positives = 314/482 (65%), Gaps = 18/482 (3%)
 Frame = -3

Query: 2357 LDDKGEKCIFLGYSERTKGYKLFNPVTSVVISSRDVVLSEDESWDSTKTEKTKSILD-ID 2181
            LDDK EK IF+GY   +KGYKL+NP T   I SR++V  E+  WD    E+  +     +
Sbjct: 713  LDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFE 772

Query: 2180 DDPLSANNDDPDVLPSPETNSVSSISPRRNPTRTRIQHTRLQDYIVAANNVVLEEDVVNF 2001
            +D      ++P   PS E  +     P  +PT ++I+                       
Sbjct: 773  EDKPEPTREEP---PSEEPTT-----PPTSPTSSQIEEK--------------------- 803

Query: 2000 ALFAGCDPLTFDEASRDDGWIQAMDAEIQAIEKNNTWKLTSLPKGKKSIGVKWVYKSKYN 1821
                 C+P+ F EA     W  AMD EI++I+KN+TW+LTSLP G K+IGVKWVYK+K N
Sbjct: 804  -----CEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKN 858

Query: 1820 KDNQVDKLKARLVVKGYKQKLGVDYDEVFAPVARMETIRMVIAMAAQMKWSIFQMDVKSA 1641
               +V++ KARLV KGY Q+ G+DYDEVFAPVAR+ET+R++I++AAQ KW I QMDVKSA
Sbjct: 859  SKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSA 918

Query: 1640 FLNGVLKEEVYVDQPTGYVKKGHEDKVLKLNKVLYGLKQAPQAWYTRIDSYFQ*QG---- 1473
            FLNG L+EEVY++QP GY+ KG EDKVL+L K LYGLKQAP+AW TRID YF+ +     
Sbjct: 919  FLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKC 978

Query: 1472 -------------NILVVCLYVDDVMFTGNNSNMLDEFNKEMTNRFEMTDTRFMSFFLGL 1332
                         +IL+ CLYVDD++FTGNN +M +EF KEMT  FEMTD   MS++LG+
Sbjct: 979  PYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGI 1038

Query: 1331 EVMQTTEGIFLSQKKYVGDIFKKFKMKFYNPIKTPVETRLHLNKVGKGELVNAAEYRSLV 1152
            EV Q   GIF++Q+ Y  ++ KKFKM   NP+ TP+E  + L+K  +GE V+   ++SLV
Sbjct: 1039 EVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLV 1098

Query: 1151 GSLRYLTHTRPDIVFGVGLISQFMETPSEDHLQAAKRIMRHLKGTQTHGLFYTSVKRFQS 972
            GSLRYLT TRPDI++ VG++S++ME P+  H +AAKRI+R++KGT   GL Y++   ++ 
Sbjct: 1099 GSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKL 1158

Query: 971  GG 966
             G
Sbjct: 1159 VG 1160



 Score =  188 bits (477), Expect(3) = 0.0
 Identities = 91/159 (57%), Positives = 112/159 (70%)
 Frame = -1

Query: 982  DSNLVGYIDSDWAGDVEDRKSTSDFVFHIGSSVVYWSSKKQQVVALSTTEAEYMAATSCA 803
            D  LVGY DSDW GDV+DRKSTS FVF+IG +   W SKKQ +V LST EAEY+AATSC 
Sbjct: 1155 DYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCV 1214

Query: 802  SQVVWLRRLLNELHQQQYSPTTIYCDNRSAIALTKNPVFHGRSKHIDIKFHYI*DLATEG 623
               +WLR LL EL   Q  PT I+ DN+SAIAL KNPVFH RSKHID ++HYI +  ++ 
Sbjct: 1215 CHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKK 1274

Query: 622  KIVLDYCNTEEKIADIFTKLLNAEVFYKLKEKLGVHNSN 506
             + L+Y  T +++ADIFTK L  E F K++  LGV  S+
Sbjct: 1275 DVQLEYVKTHDQVADIFTKPLKREDFIKMRSLLGVAKSS 1313


>XP_013688817.1 PREDICTED: uncharacterized protein LOC106392554, partial [Brassica
            napus]
          Length = 2682

 Score =  463 bits (1192), Expect(3) = 0.0
 Identities = 235/474 (49%), Positives = 317/474 (66%), Gaps = 19/474 (4%)
 Frame = -3

Query: 2357 LDDKGEKCIFLGYSERTKGYKLFNPVTSVVISSRDVVLSEDESWD-STKTEKTKSILDID 2181
            LDDK EK IF+GY   +KGYKL+NP T   I SR+V+  E+  WD  +  E        +
Sbjct: 2060 LDDKSEKYIFIGYDANSKGYKLYNPETKKTIISRNVIFDEEGEWDWRSNNEDYNFFPSFE 2119

Query: 2180 DDPLSANNDDPDVLP-SPETNSVSSISPRRNPTRTRIQHTRLQDYIVAANNVVLEEDVVN 2004
            ++ +    ++P   P SP T+S    S      R R     LQD      N   ++++  
Sbjct: 2120 EENVEQPREEPATPPTSPTTSSQGDESSSERTPRFR----SLQDIYEVTEN---QDNLTL 2172

Query: 2003 FALFAGCDPLTFDEASRDDGWIQAMDAEIQAIEKNNTWKLTSLPKGKKSIGVKWVYKSKY 1824
            F LFA C+P+ F+EA     W  AMD EI++I+KN+TW+L SLP G K+IGVKWVYK+K 
Sbjct: 2173 FCLFADCEPMNFEEAQEKKSWRSAMDEEIKSIQKNDTWELASLPNGHKAIGVKWVYKAKK 2232

Query: 1823 NKDNQVDKLKARLVVKGYKQKLGVDYDEVFAPVARMETIRMVIAMAAQMKWSIFQMDVKS 1644
            N   +V++ KARLV KGY Q+ G+DYDEVFAPVAR+ET+R++I++AAQ  W I QMDVKS
Sbjct: 2233 NSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQKSWRIHQMDVKS 2292

Query: 1643 AFLNGVLKEEVYVDQPTGYVKKGHEDKVLKLNKVLYGLKQAPQAWYTRIDSYFQ*QG--- 1473
            AFLNG L+EEVY++QP GY+ +G EDKVL+L K LYGLKQAP+AW TRID YF+ +G   
Sbjct: 2293 AFLNGDLEEEVYIEQPQGYIVEGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKGFIK 2352

Query: 1472 --------------NILVVCLYVDDVMFTGNNSNMLDEFNKEMTNRFEMTDTRFMSFFLG 1335
                          +IL+ CLYVDD++FTGNN  M ++F  EMT  FEMTD   MS++LG
Sbjct: 2353 CPYEHALYIKTQNNDILIACLYVDDLIFTGNNPIMFEDFKMEMTKEFEMTDIGLMSYYLG 2412

Query: 1334 LEVMQTTEGIFLSQKKYVGDIFKKFKMKFYNPIKTPVETRLHLNKVGKGELVNAAEYRSL 1155
            +EV Q   GIF++Q+ Y  ++ KKFKM   NP+ TP+E  + L+K  +GE V+   ++SL
Sbjct: 2413 IEVKQEENGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGVKLSKEEEGESVDPTLFKSL 2472

Query: 1154 VGSLRYLTHTRPDIVFGVGLISQFMETPSEDHLQAAKRIMRHLKGTQTHGLFYT 993
            VGSLRYLT TRPDI+  VG++S++ME P+  H +AAKRI+R++KGT   GL+Y+
Sbjct: 2473 VGSLRYLTCTRPDILHAVGVVSRYMEHPTTTHFKAAKRILRYIKGTINFGLYYS 2526



 Score =  456 bits (1172), Expect(3) = 0.0
 Identities = 239/577 (41%), Positives = 342/577 (59%), Gaps = 34/577 (5%)
 Frame = -1

Query: 3985 FESLSMNESEVISDYFTRVQTVVNELRSNGEILADTRIVEKIMRSLTEPFDYVVVAIEEG 3806
            FE+L M E E+ISDYF+RV TV N L+ NGE L D RI+EK++RSL   F+++V  IEE 
Sbjct: 1469 FEALQMKEGELISDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDSKFEHIVTVIEET 1528

Query: 3805 KYMSSLTIDGLKGSLSAYE---------------FRMKHRKPCSLEHALRSKVVITXXXX 3671
            K + ++T++ L GSL AYE                R+ H++     H  R          
Sbjct: 1529 KDLETMTMEQLLGSLQAYEEKKKKKEDIVEQVLKMRIDHKEESGRNHPRRGGGHFRGRGR 1588

Query: 3670 XXXXXXSTPAQGGFPRKT----------------DKSIIQCFRCKVFGHYRSECKAKFAK 3539
                    P +  F ++                 DKS I+C+ C  FGHY SECK     
Sbjct: 1589 GVNGRGWRPYEDNFNQRGENSSRGRGRGNPKSRYDKSSIKCYSCGKFGHYASECKTPNNN 1648

Query: 3538 KHVEHSNYVE-LEEEEHLFFTCSDDDDEEHLNSWYLDTGCTNHMCGNKELFLNLDESITG 3362
            +  E SNYVE   +EE +       D+   ++ WYLD+G +NHMCGNK +F+ LDES+  
Sbjct: 1649 RVEEKSNYVEERRKEEDMLLMAYKKDEPNEVHKWYLDSGASNHMCGNKSMFVELDESVKT 1708

Query: 3361 VVNFGNKSQVPIMG*GKVLLKLPS--YHFIYEVFYVPSLK*NLLSVGQLSVTGFRFIIER 3188
             V  G++S++ + G G +L++L +  + FI  V+Y+PS+K N+LS+GQL   G+   ++ 
Sbjct: 1709 DVALGDESRMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKD 1768

Query: 3187 GVCTIETKDDEVVGTIKMTDKRLFRLSLEPSAQCSLSAIATDDNWLWHFRYGHXXXXXXX 3008
               ++    + ++  + M+  R+F L+++      L     +++WLWH R+GH       
Sbjct: 1769 NSLSLRDNANNLITKVPMSSNRMFVLNIQNDIARCLKMCYKEESWLWHLRFGHLNFGGLE 1828

Query: 3007 XXXXXNMVTGLPLLDGVDRLCQSCVRGKQHRDSFPVGKSQRAYQQLQLVHSDICGPMQTV 2828
                  MV GLP ++  +++C+ C+ GKQ + SFP     RA + L+L+H+D+CGP++  
Sbjct: 1829 LLSKKEMVKGLPCINHPNQVCEGCLLGKQFKMSFPKESETRARKPLELIHTDVCGPIKPS 1888

Query: 2827 SHGGNRDFLTFIDDYN*KIWVYLLKQKSEAFGKFKEFKAYVENQSGSRLKVLRTDRGGEY 2648
            S G +  FL FIDD++ K WVY LKQKSE F  FK+FKA+VE +SG ++K +R+DRGGE+
Sbjct: 1889 SLGKSNYFLLFIDDFSRKTWVYFLKQKSEVFENFKKFKAHVEKESGLKIKSMRSDRGGEF 1948

Query: 2647 TLMFLTFFYKDHGIKHQLTASYTPQQNGVSERKNRTIVEMARSMLTNKNLSKTFWAEAVC 2468
                   + +D+GI+ QLT   TPQQNGV+ERKNRTI+EMARSML +K L K  WAEAV 
Sbjct: 1949 MSKEFLKYCEDNGIRRQLTVPRTPQQNGVAERKNRTILEMARSMLKSKKLPKELWAEAVA 2008

Query: 2467 CVVYILNRCPTKSVLNMTPEEAWSGYKPDVTSLCIFG 2357
            C VYI NR PTKSVL  TP+EAWSG KP V+ L +FG
Sbjct: 2009 CAVYISNRSPTKSVLEKTPQEAWSGRKPGVSHLRVFG 2045



 Score =  183 bits (464), Expect(3) = 0.0
 Identities = 89/153 (58%), Positives = 107/153 (69%)
 Frame = -1

Query: 982  DSNLVGYIDSDWAGDVEDRKSTSDFVFHIGSSVVYWSSKKQQVVALSTTEAEYMAATSCA 803
            D  LVGY DSDW GDV+DRKSTS FVF IG +   W SKKQ +V LST EAEY+AATSC 
Sbjct: 2530 DYKLVGYSDSDWGGDVDDRKSTSGFVFFIGETAFTWMSKKQPIVTLSTCEAEYVAATSCV 2589

Query: 802  SQVVWLRRLLNELHQQQYSPTTIYCDNRSAIALTKNPVFHGRSKHIDIKFHYI*DLATEG 623
               +WLR LL +L+  Q  PT I+ DN+SAIAL KNPVFH RSKHID ++HYI D  T+ 
Sbjct: 2590 CHAIWLRNLLKDLNLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRDCVTKM 2649

Query: 622  KIVLDYCNTEEKIADIFTKLLNAEVFYKLKEKL 524
             + L Y  T +++ADIFTK L  E F K++  L
Sbjct: 2650 DVQLKYVKTNDQVADIFTKPLKREDFIKMRSLL 2682



 Score =  465 bits (1196), Expect(3) = 0.0
 Identities = 236/474 (49%), Positives = 317/474 (66%), Gaps = 19/474 (4%)
 Frame = -3

Query: 2357 LDDKGEKCIFLGYSERTKGYKLFNPVTSVVISSRDVVLSEDESWD-STKTEKTKSILDID 2181
            LDDK EK IF+GY   +KGYKL+NP T   I SR+V+  E+  WD  +  E        +
Sbjct: 721  LDDKSEKYIFIGYDANSKGYKLYNPETKKTIISRNVIFDEEGEWDWRSNNEDYNFFPSFE 780

Query: 2180 DDPLSANNDDPDVLP-SPETNSVSSISPRRNPTRTRIQHTRLQDYIVAANNVVLEEDVVN 2004
            ++ +    ++P   P SP T+S    S      R R     LQD      N   ++++  
Sbjct: 781  EENVEQPREEPATPPTSPTTSSQGDESSSERTPRFR----SLQDIYEVTEN---QDNLTL 833

Query: 2003 FALFAGCDPLTFDEASRDDGWIQAMDAEIQAIEKNNTWKLTSLPKGKKSIGVKWVYKSKY 1824
            F LFA C+P+ F+EA     W  AMD EI++I+KN+TW+L SLP G K+IGVKWVYK+K 
Sbjct: 834  FCLFADCEPMNFEEAQEKKSWRSAMDEEIKSIQKNDTWELASLPNGHKAIGVKWVYKAKK 893

Query: 1823 NKDNQVDKLKARLVVKGYKQKLGVDYDEVFAPVARMETIRMVIAMAAQMKWSIFQMDVKS 1644
            N   +V++ KARLV KGY Q+ G+DYDEVFAPVAR+ET+R++I++AAQ  W I QMDVKS
Sbjct: 894  NSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQKSWRIHQMDVKS 953

Query: 1643 AFLNGVLKEEVYVDQPTGYVKKGHEDKVLKLNKVLYGLKQAPQAWYTRIDSYFQ*QG--- 1473
            AFLNG L+EEVY++QP GY+ KG EDKVL+L K LYGLKQAP+AW TRID YF+ +G   
Sbjct: 954  AFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKGFIK 1013

Query: 1472 --------------NILVVCLYVDDVMFTGNNSNMLDEFNKEMTNRFEMTDTRFMSFFLG 1335
                          +IL+ CLYVDD++FTGNN  M ++F  EMT  FEMTD   MS++LG
Sbjct: 1014 CPYEHALYIKTQNNDILIACLYVDDLIFTGNNPIMFEDFKMEMTKEFEMTDIGLMSYYLG 1073

Query: 1334 LEVMQTTEGIFLSQKKYVGDIFKKFKMKFYNPIKTPVETRLHLNKVGKGELVNAAEYRSL 1155
            +EV Q   GIF++Q+ Y  ++ KKFKM   NP+ TP+E  + L+K  +GE V+   ++SL
Sbjct: 1074 IEVKQEENGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGVKLSKEEEGESVDPTLFKSL 1133

Query: 1154 VGSLRYLTHTRPDIVFGVGLISQFMETPSEDHLQAAKRIMRHLKGTQTHGLFYT 993
            VGSLRYLT TRPDI+  VG++S++ME P+  H +AAKRI+R++KGT   GL+Y+
Sbjct: 1134 VGSLRYLTCTRPDILHAVGVVSRYMEHPTTTHFKAAKRILRYIKGTINFGLYYS 1187



 Score =  451 bits (1161), Expect(3) = 0.0
 Identities = 237/577 (41%), Positives = 342/577 (59%), Gaps = 34/577 (5%)
 Frame = -1

Query: 3985 FESLSMNESEVISDYFTRVQTVVNELRSNGEILADTRIVEKIMRSLTEPFDYVVVAIEEG 3806
            FE+L M E E+ISDYF+RV TV N L+ NGE L + RI+EK++RSL   F+++V  IEE 
Sbjct: 130  FEALQMKEGELISDYFSRVLTVTNNLKRNGEKLDEVRIMEKVLRSLDSKFEHIVTIIEET 189

Query: 3805 KYMSSLTIDGLKGSLSAYE---------------FRMKHRKPCSLEHALRSKVVITXXXX 3671
            K + ++T++ L GSL AYE                R+ H++     +  R          
Sbjct: 190  KDLETMTMEQLLGSLQAYEEKKKKKEDIVEQVLKMRIDHKEESGRSNLRRGGGHFRGRGC 249

Query: 3670 XXXXXXSTPAQGGFPRKT----------------DKSIIQCFRCKVFGHYRSECKAKFAK 3539
                    P +  F ++                 DKS I+C+ C  FGHY SECK     
Sbjct: 250  GVNGRGWRPYEDNFNQRGENSSRGRGRGNPKSRYDKSSIKCYSCGKFGHYASECKTPNKN 309

Query: 3538 KHVEHSNYVE-LEEEEHLFFTCSDDDDEEHLNSWYLDTGCTNHMCGNKELFLNLDESITG 3362
            +  E SNYVE   +EE +       D+   ++ WYLD+G +NHMCGNK +F+ LDES+  
Sbjct: 310  RVEEKSNYVEERSKEEDMLLMAYKKDEPNEVHKWYLDSGASNHMCGNKSMFVELDESVKT 369

Query: 3361 VVNFGNKSQVPIMG*GKVLLKLPS--YHFIYEVFYVPSLK*NLLSVGQLSVTGFRFIIER 3188
             V  G++S++ + G G +L++L +  + FI  V+Y+PS+K N+LS+GQL   G+   ++ 
Sbjct: 370  DVALGDESRMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKD 429

Query: 3187 GVCTIETKDDEVVGTIKMTDKRLFRLSLEPSAQCSLSAIATDDNWLWHFRYGHXXXXXXX 3008
               ++    + ++  + M+  R+F L+++      L     +++WLWH R+GH       
Sbjct: 430  NSLSLRDNANNLITKVPMSSNRMFVLNIQNDIARCLKMCYKEESWLWHLRFGHLNFGGLE 489

Query: 3007 XXXXXNMVTGLPLLDGVDRLCQSCVRGKQHRDSFPVGKSQRAYQQLQLVHSDICGPMQTV 2828
                  MV GLP ++  +++C+ C+ GKQ + SFP     RA + L+L+H+D+CGP++  
Sbjct: 490  LLSKKEMVKGLPCINHPNQVCEGCLLGKQFKMSFPKESETRARKPLELIHTDVCGPIKPS 549

Query: 2827 SHGGNRDFLTFIDDYN*KIWVYLLKQKSEAFGKFKEFKAYVENQSGSRLKVLRTDRGGEY 2648
            S G +  FL FIDD++ K WVY LKQKSE F  FK+FKA+VE +SG ++K +R+DRGGE+
Sbjct: 550  SLGKSNYFLLFIDDFSRKTWVYFLKQKSEVFENFKKFKAHVEKESGLKIKSMRSDRGGEF 609

Query: 2647 TLMFLTFFYKDHGIKHQLTASYTPQQNGVSERKNRTIVEMARSMLTNKNLSKTFWAEAVC 2468
                   + +D+GI+ QLT   TPQQNGV+ERKNRTI+EMARSML +K L K  WAEAV 
Sbjct: 610  MSKEFLKYCEDNGIRRQLTVPRTPQQNGVAERKNRTILEMARSMLKSKKLPKELWAEAVA 669

Query: 2467 CVVYILNRCPTKSVLNMTPEEAWSGYKPDVTSLCIFG 2357
            C VYI NR PTKSVL  TP+EAWSG KP V+ L +FG
Sbjct: 670  CAVYISNRSPTKSVLEKTPQEAWSGRKPGVSHLRVFG 706



 Score =  178 bits (451), Expect(3) = 0.0
 Identities = 85/139 (61%), Positives = 101/139 (72%)
 Frame = -1

Query: 982  DSNLVGYIDSDWAGDVEDRKSTSDFVFHIGSSVVYWSSKKQQVVALSTTEAEYMAATSCA 803
            D  LVGY DSDW GDV+DRKSTS FVF IG +   W SKKQ +V LST EAEY+AATSC 
Sbjct: 1191 DYKLVGYSDSDWGGDVDDRKSTSGFVFFIGETAFTWMSKKQPIVTLSTCEAEYVAATSCV 1250

Query: 802  SQVVWLRRLLNELHQQQYSPTTIYCDNRSAIALTKNPVFHGRSKHIDIKFHYI*DLATEG 623
               +WLR LL EL+  Q  PT I+ DNRSAIAL KNPVFH RSKHID ++HYI +  T+ 
Sbjct: 1251 CHAIWLRNLLKELNLPQEEPTKIFVDNRSAIALAKNPVFHDRSKHIDTRYHYIRECVTKM 1310

Query: 622  KIVLDYCNTEEKIADIFTK 566
             + L+Y  T +++ADIFTK
Sbjct: 1311 DVQLEYVKTNDQVADIFTK 1329


>AIC77183.1 polyprotein [Gossypium barbadense]
          Length = 1369

 Score =  489 bits (1258), Expect(3) = 0.0
 Identities = 253/478 (52%), Positives = 323/478 (67%), Gaps = 23/478 (4%)
 Frame = -3

Query: 2357 LDDKGEKCIFLGYSERTKGYKLFNPVTSVVISSRDVVLSEDESWDSTKTEKTKSILDIDD 2178
            LDD+GEKCIF+GY +R+K Y+L+NP+T  +I SRDV   E + W  ++ EK    L  ++
Sbjct: 730  LDDRGEKCIFIGYDKRSKAYRLYNPLTKKLIISRDVEFDEADYWRWSEEEKKVEGLFFNE 789

Query: 2177 DPLSANNDDPD-----VLPSPETNSVSSISPRRNPTRTRIQHTRLQDYIVAANNVVLEED 2013
            D  +      D       PS  T+S  S S    PTRTR     L D   +   V  + D
Sbjct: 790  DDNNQEEQGDDQSPGTTAPSSPTSSSGSSSLDEAPTRTR----SLNDIYNSTEPVETQFD 845

Query: 2012 VVNFALFAGCDPLTFDEASRDDGWIQAMDAEIQAIEKNNTWKLTSLPKGKKSIGVKWVYK 1833
               F L   CDP+T++EA  ++ W +AMD EI AI +N+TW+LTSLP+G   IGVKWVYK
Sbjct: 846  YSLFCLMTECDPVTYEEAIENNKWKKAMDEEIAAIRRNDTWELTSLPEGHSPIGVKWVYK 905

Query: 1832 SKYNKDNQVDKLKARLVVKGYKQKLGVDYDEVFAPVARMETIRMVIAMAAQMKWSIFQMD 1653
            +K NK+ +V+K KARLV KGYKQ+ GVDYDE+FAPVAR++TIR++IA+AAQ KW I+QMD
Sbjct: 906  TKTNKEGKVEKYKARLVAKGYKQRQGVDYDEIFAPVARIDTIRLLIAVAAQYKWKIYQMD 965

Query: 1652 VKSAFLNGVLKEEVYVDQPTGYVKKGHEDKVLKLNKVLYGLKQAPQAWYTRIDSYFQ*Q- 1476
            VKSAFLNG L+EEVY++QP GY  +G EDKV +L K LYGLKQAP+AW TRID YF+   
Sbjct: 966  VKSAFLNGYLEEEVYIEQPPGYSIQGKEDKVYRLKKSLYGLKQAPRAWNTRIDEYFRRNG 1025

Query: 1475 -----------------GNILVVCLYVDDVMFTGNNSNMLDEFNKEMTNRFEMTDTRFMS 1347
                             G+I++VCLYVDD++FTGNN  M D+F K MT  FEMTD   MS
Sbjct: 1026 FIKSPHEHTLYTKKNGYGDIMIVCLYVDDMIFTGNNPGMSDDFKKAMTKEFEMTDIGEMS 1085

Query: 1346 FFLGLEVMQTTEGIFLSQKKYVGDIFKKFKMKFYNPIKTPVETRLHLNKVGKGELVNAAE 1167
            +FLG+EV Q  +GIF+SQKKY   I  KFKMK   P+ TP +  + L+     E +N   
Sbjct: 1086 YFLGVEVKQMQDGIFVSQKKYAEQILNKFKMKDCKPVVTPADPGMKLSVDSTRESINPTL 1145

Query: 1166 YRSLVGSLRYLTHTRPDIVFGVGLISQFMETPSEDHLQAAKRIMRHLKGTQTHGLFYT 993
            ++SLVGSLRYLT TRPDI + VGL+S+FME P +DHL AAKRI+R++KGT  HGLFYT
Sbjct: 1146 FKSLVGSLRYLTITRPDITYAVGLVSRFMEKPKQDHLIAAKRILRYIKGTMNHGLFYT 1203



 Score =  418 bits (1074), Expect(3) = 0.0
 Identities = 214/425 (50%), Positives = 279/425 (65%), Gaps = 5/425 (1%)
 Frame = -1

Query: 3616 DKSIIQCFRCKVFGHYRSECKAKFA---KKHVEHSNYVELEEEEHLFFTCSDDDDEEHLN 3446
            +KS +QC+ C  +GH+  EC++      + HV  +     + E  +F T  +++D +  +
Sbjct: 292  NKSQVQCYNCNKYGHFSYECRSTHKVDERNHVAVAAEGNEKVESSVFLTYGENEDRKR-S 350

Query: 3445 SWYLDTGCTNHMCGNKELFLNLDESITGVVNFGNKSQVPIMG*GKVLL--KLPSYHFIYE 3272
             WYLD G +NHMCG KELF  LDE++ G + FG+ S   I G GKV++  +     +I +
Sbjct: 351  VWYLDNGASNHMCGRKELFTELDETVHGQITFGDNSHAEIKGKGKVVITQRNGEKKYISD 410

Query: 3271 VFYVPSLK*NLLSVGQLSVTGFRFIIERGVCTIETKDDEVVGTIKMTDKRLFRLSLEPSA 3092
            V+YVP+LK NL+S+GQL   G+   ++     I  K  E+V  + MT  RLF L +E   
Sbjct: 411  VYYVPALKSNLISLGQLLEKGYEVHMKDRSLAIRNKSGELVVRVDMTRNRLFTLDIESGE 470

Query: 3091 QCSLSAIATDDNWLWHFRYGHXXXXXXXXXXXXNMVTGLPLLDGVDRLCQSCVRGKQHRD 2912
               +     +++WLWH RYGH            NMV GLP ++  D+LC++CV+GKQHR 
Sbjct: 471  VKCMKTDLKNESWLWHLRYGHLGFSGLKLLSKTNMVNGLPSINHPDQLCEACVKGKQHRQ 530

Query: 2911 SFPVGKSQRAYQQLQLVHSDICGPMQTVSHGGNRDFLTFIDDYN*KIWVYLLKQKSEAFG 2732
             F VGKS+RA + L++VH+DI GP    S GGNR +LTFIDDY+ K WVY LK KSEA  
Sbjct: 531  KFEVGKSRRARRPLEIVHTDISGPYDIESLGGNRYYLTFIDDYSRKCWVYFLKAKSEALE 590

Query: 2731 KFKEFKAYVENQSGSRLKVLRTDRGGEYTLMFLTFFYKDHGIKHQLTASYTPQQNGVSER 2552
            KFKEFKA VE QSG  LK+LR+DRGGEYT      F KDHGI HQLTA  TPQQNGV+ER
Sbjct: 591  KFKEFKAMVEKQSGRYLKILRSDRGGEYTAKLYESFCKDHGIIHQLTARRTPQQNGVAER 650

Query: 2551 KNRTIVEMARSMLTNKNLSKTFWAEAVCCVVYILNRCPTKSVLNMTPEEAWSGYKPDVTS 2372
            KNRTI++MARSM+  K+L +TFWAEAV C VY+LN+CPTKSV + TPEEAWSG+KP V  
Sbjct: 651  KNRTILDMARSMIKGKHLPRTFWAEAVECAVYLLNQCPTKSVRHKTPEEAWSGHKPRVGH 710

Query: 2371 LCIFG 2357
            L IFG
Sbjct: 711  LKIFG 715



 Score =  190 bits (482), Expect(3) = 0.0
 Identities = 91/163 (55%), Positives = 114/163 (69%)
 Frame = -1

Query: 1006 GCFILQLKDSNLVGYIDSDWAGDVEDRKSTSDFVFHIGSSVVYWSSKKQQVVALSTTEAE 827
            G F    +DS LVGY DSD+ GD++DRKSTS + FHI S+V  WSSKKQQ +ALST EAE
Sbjct: 1199 GLFYTHSQDSKLVGYSDSDYGGDLDDRKSTSGYAFHISSAVFSWSSKKQQTIALSTCEAE 1258

Query: 826  YMAATSCASQVVWLRRLLNELHQQQYSPTTIYCDNRSAIALTKNPVFHGRSKHIDIKFHY 647
            YMAA +C  Q +WL+ +L E+      P TIY DN+SAI+L KNPV H RSKHID K+H+
Sbjct: 1259 YMAAATCTCQAMWLKNILGEIGVSNEGPITIYVDNKSAISLAKNPVSHSRSKHIDTKYHF 1318

Query: 646  I*DLATEGKIVLDYCNTEEKIADIFTKLLNAEVFYKLKEKLGV 518
            I +      + L +C TE+++ADIFTK L  E F K KEKLG+
Sbjct: 1319 IREQVKNKNVELVHCRTEDQLADIFTKPLKVETFNKFKEKLGM 1361



 Score = 96.3 bits (238), Expect = 3e-16
 Identities = 52/101 (51%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
 Frame = -1

Query: 3985 FESLSMNESEVISDYFTRVQTVVNELRSNGEILADTRIVEKIMRSLTEPFDYVVVAIEEG 3806
            FE L M  SE I DY  RV++VVNE++ NGE L + R++EKI+RSLT  F+YVVVAIEE 
Sbjct: 122  FEMLKMKSSENIDDYANRVKSVVNEMKRNGETLDEVRVMEKILRSLTRKFEYVVVAIEES 181

Query: 3805 KYMSSLTIDGLKGSLSAYEFRMKHRKPC-SLEHALRSKVVI 3686
            K +S ++++ L GSL A+E +MK  +   +L  AL SK+ I
Sbjct: 182  KDLSKMSLEELVGSLQAHEQKMKLNEDSENLNQALHSKLSI 222


>AAF16534.1 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score =  464 bits (1194), Expect(3) = 0.0
 Identities = 232/483 (48%), Positives = 319/483 (66%), Gaps = 19/483 (3%)
 Frame = -3

Query: 2357 LDDKGEKCIFLGYSERTKGYKLFNPVTSVVISSRDVVLSEDESWDSTKTEKTKSILDI-- 2184
            LDDK EK IF+GY   +KGYKL+NP T   I SR++V  E+  WD    E+  +      
Sbjct: 652  LDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFE 711

Query: 2183 DDDPLSANNDDPDVLPSPETNSVSSISPRRNPTRTRIQHTRLQDYIVAANNVVLEEDVVN 2004
            +D+P     + P   P+    S++S     + +    +   +Q+      N   +E++  
Sbjct: 712  EDEPEPTREEPPSEEPTTRPTSLTSSQIEESSSERTPRFRSIQELYEVTEN---QENLTL 768

Query: 2003 FALFAGCDPLTFDEASRDDGWIQAMDAEIQAIEKNNTWKLTSLPKGKKSIGVKWVYKSKY 1824
            F LFA C+P+ F EA     W  AMD EI++I+KN+TW+LTSLP G K+IGVKWVYK+K 
Sbjct: 769  FCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKK 828

Query: 1823 NKDNQVDKLKARLVVKGYKQKLGVDYDEVFAPVARMETIRMVIAMAAQMKWSIFQMDVKS 1644
            N   +V++ KARLV KGY Q+ G+DYDEVFAPVAR+ET+R++I++AAQ KW I QMD K 
Sbjct: 829  NSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDFKL 888

Query: 1643 AFLNGVLKEEVYVDQPTGYVKKGHEDKVLKLNKVLYGLKQAPQAWYTRIDSYFQ*QG--- 1473
            AFLNG  +EEVY++QP GY+ KG EDKVL+L K LYGLKQAP+AW TRID YF+ +    
Sbjct: 889  AFLNGDFEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIK 948

Query: 1472 --------------NILVVCLYVDDVMFTGNNSNMLDEFNKEMTNRFEMTDTRFMSFFLG 1335
                          +IL+ CLYVDD++FTGNN +M +EF KEMT  FEMTD   MS++LG
Sbjct: 949  CPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLG 1008

Query: 1334 LEVMQTTEGIFLSQKKYVGDIFKKFKMKFYNPIKTPVETRLHLNKVGKGELVNAAEYRSL 1155
            +EV Q    IF++Q+ Y  ++ KKFKM   NP+ TP+E  + L+K  +GE V+   ++SL
Sbjct: 1009 IEVKQEDNRIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSL 1068

Query: 1154 VGSLRYLTHTRPDIVFGVGLISQFMETPSEDHLQAAKRIMRHLKGTQTHGLFYTSVKRFQ 975
            VGSLRYLT TRPDI++ VG++S++ME P+  H +AAKRI+R++KGT   GL Y++   ++
Sbjct: 1069 VGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYK 1128

Query: 974  SGG 966
              G
Sbjct: 1129 LVG 1131



 Score =  393 bits (1010), Expect(3) = 0.0
 Identities = 218/547 (39%), Positives = 319/547 (58%), Gaps = 4/547 (0%)
 Frame = -1

Query: 3985 FESLSMNESEVISDYFTRVQTVVNELRSNGEILADTRIVEKIMRSLTEPFDYVVVAIEEG 3806
            FE+L M E E++SDYF+RV TV N L+ NGE L D RI+EK++RSL   F+++V  IEE 
Sbjct: 120  FEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEET 179

Query: 3805 KYMSSLTIDGLKGSLSAYEFRMKHRKPCSLEHALRSKVVITXXXXXXXXXXSTPAQGGFP 3626
            K + ++TI+ L GSL AYE + K +K   +E  L  ++                  GG  
Sbjct: 180  KDLEAMTIEQLLGSLQAYEEKKK-KKEDIVEQVLNMRITKEENGQSYQRRG-----GGEV 233

Query: 3625 RKTDKSIIQCFRCKVFGHYRSECKAKFAKKHVEHSNYVE--LEEEEHLFFTCSDDDDEEH 3452
            R   +      R        +  +A   KK  E +NYVE  ++EE+ L       D++E 
Sbjct: 234  RGRGRGGYGNGRGWRPHEDNTNQRAPSNKKFEEKANYVEEKIQEEDMLLMASYKKDEQEE 293

Query: 3451 LNSWYLDTGCTNHMCGNKELFLNLDESITGVVNFGNKSQVPIMG*GKVLLKLPS--YHFI 3278
             + WYLD+G +NHMCG K +F  LDES+ G V  G++S++ + G G +L++L +  + FI
Sbjct: 294  NHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFI 353

Query: 3277 YEVFYVPSLK*NLLSVGQLSVTGFRFIIERGVCTIETKDDEVVGTIKMTDKRLFRLSLEP 3098
              V+Y+PS+K N+LS+GQL   G+   ++    +I  ++  ++  + M+  R+F L++  
Sbjct: 354  SNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRN 413

Query: 3097 SAQCSLSAIATDDNWLWHFRYGHXXXXXXXXXXXXNMVTGLPLLDGVDRLCQSCVRGKQH 2918
                 L     +++WLWH R+GH             MV GLP ++  +++C+ C+ GKQ 
Sbjct: 414  DIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQF 473

Query: 2917 RDSFPVGKSQRAYQQLQLVHSDICGPMQTVSHGGNRDFLTFIDDYN*KIWVYLLKQKSEA 2738
            + SFP   S RA + L+L+H+D+CGP++  S                        +KSE 
Sbjct: 474  KMSFPKESSSRAQKPLELIHTDVCGPIKPKS-----------------------LEKSEV 510

Query: 2737 FGKFKEFKAYVENQSGSRLKVLRTDRGGEYTLMFLTFFYKDHGIKHQLTASYTPQQNGVS 2558
            F  FK+FKA+VE +SG  +K +R+DRGGE+T      + +D+GI+ QLT   +PQQNGV+
Sbjct: 511  FKIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVA 570

Query: 2557 ERKNRTIVEMARSMLTNKNLSKTFWAEAVCCVVYILNRCPTKSVLNMTPEEAWSGYKPDV 2378
            ERKNRTI+EMARSML +K L K  WAEAV C VY+LNR PTKSV   TP+EAWSG KP V
Sbjct: 571  ERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGV 630

Query: 2377 TSLCIFG 2357
            + L +FG
Sbjct: 631  SHLRVFG 637



 Score =  185 bits (469), Expect(3) = 0.0
 Identities = 90/159 (56%), Positives = 111/159 (69%)
 Frame = -1

Query: 982  DSNLVGYIDSDWAGDVEDRKSTSDFVFHIGSSVVYWSSKKQQVVALSTTEAEYMAATSCA 803
            D  LVGY DSDW  DV+DRKSTS FVF+IG +   W SKKQ +V LST EAEY+AATSC 
Sbjct: 1126 DYKLVGYSDSDWGRDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCV 1185

Query: 802  SQVVWLRRLLNELHQQQYSPTTIYCDNRSAIALTKNPVFHGRSKHIDIKFHYI*DLATEG 623
               +WLR LL EL   Q  PT I+ DN+SAIAL KNPVFH RSKHID ++HYI +  ++ 
Sbjct: 1186 CHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKK 1245

Query: 622  KIVLDYCNTEEKIADIFTKLLNAEVFYKLKEKLGVHNSN 506
             + L+Y  T +++ADIFTK L  E F K++  LGV  S+
Sbjct: 1246 DVQLEYVKTHDQVADIFTKPLKREDFIKMRSLLGVAKSS 1284


>CAB75932.1 putative protein [Arabidopsis thaliana]
          Length = 1339

 Score =  426 bits (1096), Expect(3) = 0.0
 Identities = 227/491 (46%), Positives = 312/491 (63%), Gaps = 37/491 (7%)
 Frame = -3

Query: 2357 LDDKGEKCIFLGYSERTKGYKLFNPVTSVVISSRDVVLSEDESWD--STKTEKTKSILDI 2184
            LDDK +KC+FLG SE +K ++L++PV   ++ S+DVV  ED+SWD      E  +  L+ 
Sbjct: 681  LDDKSKKCVFLGVSEESKAWRLYDPVMKKIVISKDVVFDEDKSWDWDQADVEAKEVTLEC 740

Query: 2183 DDDPLSANND--DPDVLPSPE----TNSVSSI------SPRRNPTRTRIQHTR-----LQ 2055
             D+    N++  +P  + SP      N+VSS       SP  +P   ++   R     + 
Sbjct: 741  GDEDDEKNSEVVEPIAVASPNHVGSDNNVSSSPILAPSSPAPSPVAAKVTRERRPPGWMA 800

Query: 2054 DYIVAANNVVLEE-DVVNFALFAGCDPLTFDEASRDDGWIQAMDAEIQAIEKNNTWKLTS 1878
            DY       + E   V+   +    DP+ FD+A +D  W +AM+ EI++I KNNTW+LT+
Sbjct: 801  DYETGEGEEIEENLSVMLLMMMTEADPIQFDDAVKDKIWREAMEHEIESIVKNNTWELTT 860

Query: 1877 LPKGKKSIGVKWVYKSKYNKDNQVDKLKARLVVKGYKQKLGVDYDEVFAPVARMETIRMV 1698
            LPKG   IGVKWVYK+K N+D +VDK KARLV KGY Q  G+DY EVFAPVAR++T+R +
Sbjct: 861  LPKGFTPIGVKWVYKTKLNEDGEVDKYKARLVAKGYAQCYGIDYTEVFAPVARLDTVRTI 920

Query: 1697 IAMAAQMKWSIFQMDVKSAFLNGVLKEEVYVDQPTGYVKKGHEDKVLKLNKVLYGLKQAP 1518
            +A+++Q  W IFQ+DVKSAFL+G LKEEVYV QP G++++G E+KV KL K LYGLKQAP
Sbjct: 921  LAISSQFNWEIFQLDVKSAFLHGELKEEVYVRQPEGFIREGEEEKVYKLRKALYGLKQAP 980

Query: 1517 QAWYTRIDSYFQ*Q-----------------GNILVVCLYVDDVMFTGNNSNMLDEFNKE 1389
            +AWY+RI++YF  +                 GNIL+V LYVDD++FTG++  M DEF K 
Sbjct: 981  RAWYSRIEAYFLKEEFERCPSEHTLFTKTRVGNILIVSLYVDDLIFTGSDKAMCDEFKKS 1040

Query: 1388 MTNRFEMTDTRFMSFFLGLEVMQTTEGIFLSQKKYVGDIFKKFKMKFYNPIKTPVETRLH 1209
            M   FEM+D   M  FLG+EV Q+  GIF+ Q++Y  ++  +F M   N +K P+     
Sbjct: 1041 MMLEFEMSDLGKMKHFLGIEVKQSDGGIFICQRRYAREVLARFGMDESNAVKNPIVPGTK 1100

Query: 1208 LNKVGKGELVNAAEYRSLVGSLRYLTHTRPDIVFGVGLISQFMETPSEDHLQAAKRIMRH 1029
            L K   GE V+   ++ LVGSL YLT TRPD+++GV LIS+FM  P   H  AAKRI+R+
Sbjct: 1101 LTKDENGEKVDETMFKQLVGSLMYLTVTRPDLMYGVCLISRFMSNPRMSHWLAAKRILRY 1160

Query: 1028 LKGTQTHGLFY 996
            LKGT   G+FY
Sbjct: 1161 LKGTVELGIFY 1171



 Score =  409 bits (1051), Expect(3) = 0.0
 Identities = 228/553 (41%), Positives = 317/553 (57%), Gaps = 10/553 (1%)
 Frame = -1

Query: 3985 FESLSMNESEVISDYFTRVQTVVNELRSNGEILADTRIVEKIMRSLTEPFDYVVVAIEEG 3806
            FE L+M E E I  +  R  TVVN++++NGE++  + IV KI+RSLT  F+YVV +IEE 
Sbjct: 122  FELLAMKEGEKIDTFLGRTLTVVNKMKTNGEVMEQSTIVSKILRSLTPKFNYVVCSIEES 181

Query: 3805 KYMSSLTIDGLKGSLSAYEFRM----KHRKPCSLEHALRSKVVITXXXXXXXXXXSTPAQ 3638
              +S+L+ID L GSL  +E R+    +  +   + H  R                    +
Sbjct: 182  NDLSTLSIDELHGSLLVHEQRLNGHVQEEQALKVTHEERPS---QGRGRGVFRGSRGRGR 238

Query: 3637 GGFPRKTDKSIIQCFRCKVFGHYRSECKAKFAKKHVEHSNYVELEEEEHLFFTCSDDDDE 3458
            G     T+++I++C++C   GH++ EC      +  +++NY ELEEEE L      + ++
Sbjct: 239  GRGRSGTNRAIVECYKCHNLGHFQYECP-----EWEKNANYAELEEEEELLLMAYVEQNQ 293

Query: 3457 EHLNS-WYLDTGCTNHMCGNKELFLNLDESITGVVNFGNKSQVPIMG*GKVLLKLPSY-H 3284
             + +  W+LD+GC+NHM G+KE F  L+E     V  GN +++ ++G G V +K+     
Sbjct: 294  ANRDEVWFLDSGCSNHMTGSKEWFSELEEGFNRTVKLGNDTRMSVVGKGSVKVKVNGVTQ 353

Query: 3283 FIYEVFYVPSLK*NLLSVGQLSVTGFRFIIERGVCTIETKDDEVVGTIKMTDKRLFRLSL 3104
             I EV+YVP L+ NLLS+GQL   G   +I  G C +       +    M+  R+F L  
Sbjct: 354  VIPEVYYVPELRNNLLSLGQLQERGLAILIRDGTCKVYHPSKGAIMETNMSGNRMFFLLA 413

Query: 3103 EPSAQCSL----SAIATDDNWLWHFRYGHXXXXXXXXXXXXNMVTGLPLLDGVDRLCQSC 2936
                + SL      +   +N LWH R+GH             MV GLP+L     +C  C
Sbjct: 414  SKPQKNSLCLQTEEVMDKENHLWHCRFGHLNQEGLKLLAHKKMVIGLPILKATKEICAIC 473

Query: 2935 VRGKQHRDSFPVGKSQRAYQQLQLVHSDICGPMQTVSHGGNRDFLTFIDDYN*KIWVYLL 2756
            + GKQHR+S     S ++  QLQLVHSDICGP+  +SH G R  L+FIDD+  K WVY L
Sbjct: 474  LTGKQHRESMSKKTSWKSSTQLQLVHSDICGPITPISHSGKRYILSFIDDFTRKTWVYFL 533

Query: 2755 KQKSEAFGKFKEFKAYVENQSGSRLKVLRTDRGGEYTLMFLTFFYKDHGIKHQLTASYTP 2576
             +KSEAF  FK FKA VE + G+ L  LRTDRGGE+T      F + HGI  QLTA++TP
Sbjct: 534  HEKSEAFATFKIFKASVEKEIGAFLTCLRTDRGGEFTSNEFGEFCRSHGISRQLTAAFTP 593

Query: 2575 QQNGVSERKNRTIVEMARSMLTNKNLSKTFWAEAVCCVVYILNRCPTKSVLNMTPEEAWS 2396
            QQNGV+ERKNRTI+   RSML+ + + K FW+EA    V+I NR PT +V  MTPEEAWS
Sbjct: 594  QQNGVAERKNRTIMNAVRSMLSERQVPKMFWSEATKWSVHIQNRSPTAAVEGMTPEEAWS 653

Query: 2395 GYKPDVTSLCIFG 2357
            G KP V    +FG
Sbjct: 654  GRKPVVEYFRVFG 666



 Score =  179 bits (455), Expect(3) = 0.0
 Identities = 89/171 (52%), Positives = 122/171 (71%), Gaps = 2/171 (1%)
 Frame = -1

Query: 1009 MGCFILQLKDSNL--VGYIDSDWAGDVEDRKSTSDFVFHIGSSVVYWSSKKQQVVALSTT 836
            +G F  + K+ +L  + + DSD+AGD+ DR+STS FVF + S  + W+SKKQ VVALSTT
Sbjct: 1167 LGIFYRRRKNRSLKLMAFTDSDYAGDLNDRRSTSGFVFLMASGAICWASKKQPVVALSTT 1226

Query: 835  EAEYMAATSCASQVVWLRRLLNELHQQQYSPTTIYCDNRSAIALTKNPVFHGRSKHIDIK 656
            EAEY+AA  CA Q VWLR++L +L  ++ S T I CDN S I L+K+PV HG+SKHI+++
Sbjct: 1227 EAEYIAAAFCACQCVWLRKVLEKLGAEEKSATVINCDNSSTIQLSKHPVLHGKSKHIEVR 1286

Query: 655  FHYI*DLATEGKIVLDYCNTEEKIADIFTKLLNAEVFYKLKEKLGVHNSNE 503
            FHY+ DL     + L+YC TE+++ADIFTK L  E F KL+  LG+ N +E
Sbjct: 1287 FHYLRDLVNGDVVKLEYCPTEDQVADIFTKPLKLEQFEKLRALLGMVNMSE 1337


>GAU24969.1 hypothetical protein TSUD_312040 [Trifolium subterraneum]
          Length = 1326

 Score =  422 bits (1085), Expect(3) = 0.0
 Identities = 236/545 (43%), Positives = 315/545 (57%), Gaps = 2/545 (0%)
 Frame = -1

Query: 3985 FESLSMNESEVISDYFTRVQTVVNELRSNGEILADTRIVEKIMRSLTEPFDYVVVAIEEG 3806
            FE L+M + E + +YF RV T+ N +  +GE L    IVEKI+RS+   F++VV +IE  
Sbjct: 119  FEVLAMRDGESVDEYFGRVLTIANRMTVHGERLEAVTIVEKILRSMHPRFNHVVCSIEVS 178

Query: 3805 KYMSSLTIDGLKGSLSAYEFRMKHRKPCSLEHALRSKVVITXXXXXXXXXXSTPAQGGFP 3626
              +++L+++ L+ +L  +E R+K ++    E AL  K+             ST    G  
Sbjct: 179  CDVTTLSVEELQSTLLVHEQRLKVQQDSVEEQAL--KISSAGRGYGRGRGRSTSRGRGRG 236

Query: 3625 RKTDKSIIQCFRCKVFGHYRSECKAKFAKKHVEHSNYVEL-EEEEHLFFTCSDDDDEEHL 3449
            R+ +K  I+CF+C   GHYRSEC         E++NY E  +EEE L    ++ D     
Sbjct: 237  RQINKETIECFKCHKLGHYRSECP-----DWGENANYAEFNDEEETLLMAKTEHDGVIKE 291

Query: 3448 NSWYLDTGCTNHMCGNKELFLNLDESITGVVNFGNKSQVPIMG*GKV-LLKLPSYHFIYE 3272
             +WYLD+GC+NHM GNK+   + D S    V  GN +++ +MG G V L  L   H I  
Sbjct: 292  ETWYLDSGCSNHMIGNKDWLFDFDASFRDSVRLGNDAKMSVMGRGSVKLFILGKVHVISN 351

Query: 3271 VFYVPSLK*NLLSVGQLSVTGFRFIIERGVCTIETKDDEVVGTIKMTDKRLFRLSLEPSA 3092
            V+Y+P L  NLLSVGQL       I +  VC     +  ++ +  M+  R++ ++     
Sbjct: 352  VYYLPGLNTNLLSVGQLQQKNVTIIFKNDVCKAYHDEKGLIFSTPMSTNRMYIITAPVLV 411

Query: 3091 QCSLSAIATDDNWLWHFRYGHXXXXXXXXXXXXNMVTGLPLLDGVDRLCQSCVRGKQHRD 2912
               L     D+  LWH RYGH            +MV GLP L  +D  C  C+ GKQ R+
Sbjct: 412  PMCLQTSIEDNTQLWHLRYGHLSIKGLKLLSKKDMVKGLPALQDMDEKCIDCLNGKQQRE 471

Query: 2911 SFPVGKSQRAYQQLQLVHSDICGPMQTVSHGGNRDFLTFIDDYN*KIWVYLLKQKSEAFG 2732
            + P     RA  +LQL+HSDICGP+   S+GG R FLTF DD++ K WVY+LK+KSEAF 
Sbjct: 472  AIPKQAKWRATTKLQLIHSDICGPINPSSNGGKRYFLTFTDDFSRKTWVYVLKEKSEAFE 531

Query: 2731 KFKEFKAYVENQSGSRLKVLRTDRGGEYTLMFLTFFYKDHGIKHQLTASYTPQQNGVSER 2552
             FK FKA VE +SG  ++ LRTDRGGE+T      F    GIK QLT +YTPQQNGVSER
Sbjct: 532  IFKIFKAMVELESGCMIQALRTDRGGEFTSSVFNEFCNSKGIKRQLTTAYTPQQNGVSER 591

Query: 2551 KNRTIVEMARSMLTNKNLSKTFWAEAVCCVVYILNRCPTKSVLNMTPEEAWSGYKPDVTS 2372
            KNRT++ M RSML  KN+ K FW EA+    YILNR PT SV NMTPEEAWSG KP VT 
Sbjct: 592  KNRTLLNMIRSMLVCKNVPKIFWPEALKWATYILNRSPTISVKNMTPEEAWSGTKPSVTH 651

Query: 2371 LCIFG 2357
              +FG
Sbjct: 652  FRVFG 656



 Score =  405 bits (1042), Expect(3) = 0.0
 Identities = 216/494 (43%), Positives = 306/494 (61%), Gaps = 40/494 (8%)
 Frame = -3

Query: 2357 LDDKGEKCIFLGYSERTKGYKLFNPVTSVVISSRDVVLSEDESWDSTKTEKT-------- 2202
            LD+K  KC+ LG S+ +K YKL+NP+   ++ SRDVV  E + WD    +K         
Sbjct: 671  LDNKSVKCVHLGISDESKAYKLYNPIEKKIVISRDVVFDESKGWDWDNKDKQNDNRTSHE 730

Query: 2201 --------KSILDIDDDPLSANNDDPDVLPSPE------TNSVSSISPRRNPTRTRIQHT 2064
                    + I   D++ +S N ++   + +          + SS        R R   +
Sbjct: 731  LLEDNNTEEDISGTDNENVSENENEGTGITNDSGTEEQVVENTSSDDDYDLGPRIRKTPS 790

Query: 2063 RLQDYIVAANNVVLEEDVVNFALFAGC-DPLTFDEASRDDGWIQAMDAEIQAIEKNNTWK 1887
             L+D+++       E+++ + A++  C DP  ++EAS+   W +AMD EI+AI+ N+TW+
Sbjct: 791  HLRDFVIG-REAEEEQELHSLAVYNMCGDPNNYEEASKSQKWKEAMDVEIKAIQANHTWE 849

Query: 1886 LTSLPKGKKSIGVKWVYKSKYNKDNQVDKLKARLVVKGYKQKLGVDYDEVFAPVARMETI 1707
            LT LPK  K+IGVKWVYK+KYN+  QVDK KARLVVKGY QK G+DY+EVFAPVAR ETI
Sbjct: 850  LTELPKNTKAIGVKWVYKTKYNEMGQVDKYKARLVVKGYSQKYGIDYNEVFAPVARWETI 909

Query: 1706 RMVIAMAAQMKWSIFQMDVKSAFLNGVLKEEVYVDQPTGYVKKGHEDKVLKLNKVLYGLK 1527
            R V+A+AA   W ++Q+DVKSAFL+G L E++YV+QP GY  +G  +KV KL K LYGLK
Sbjct: 910  RTVLALAASKGWCVYQLDVKSAFLHGDLDEDIYVEQPLGY-HQGDNNKVYKLKKALYGLK 968

Query: 1526 QAPQAWYTRIDSYFQ*QG-----------------NILVVCLYVDDVMFTGNNSNMLDEF 1398
            QAP+AWY++I++YF  +G                 +IL++ +YVDD++ TGNN N++ +F
Sbjct: 969  QAPRAWYSKIETYFLCEGFQKCPVEHTLFVKRIGNDILIISIYVDDLIVTGNNQNLITDF 1028

Query: 1397 NKEMTNRFEMTDTRFMSFFLGLEVMQTTEGIFLSQKKYVGDIFKKFKMKFYNPIKTPVET 1218
               M  +F M+D   M FFLG+EV QT EGIF+ Q KY  +I  KF M+  N + +P+ T
Sbjct: 1029 KMSMKKKFAMSDLGKMKFFLGVEVNQTEEGIFIHQMKYANEILSKFGMQECNSVCSPIVT 1088

Query: 1217 RLHLNKVGKGELVNAAEYRSLVGSLRYLTHTRPDIVFGVGLISQFMETPSEDHLQAAKRI 1038
               L K   G+  +A  Y+ +VGSL YL  TRPD+ F V L+++FME P+E H  A KRI
Sbjct: 1089 GCKLVKNENGKACDAKSYKQMVGSLMYLLATRPDLAFAVCLVARFMERPTEMHTAAIKRI 1148

Query: 1037 MRHLKGTQTHGLFY 996
            MR++KGT   G+ Y
Sbjct: 1149 MRYVKGTVGLGIMY 1162



 Score =  175 bits (443), Expect(3) = 0.0
 Identities = 80/152 (52%), Positives = 112/152 (73%)
 Frame = -1

Query: 973  LVGYIDSDWAGDVEDRKSTSDFVFHIGSSVVYWSSKKQQVVALSTTEAEYMAATSCASQV 794
            L G+ DSD+AGD++DRKSTS +VF +GS  + WSS+KQ +V LSTTEAE++AA SCA Q 
Sbjct: 1171 LHGWSDSDYAGDLDDRKSTSGYVFMLGSGAISWSSRKQPIVTLSTTEAEFVAAASCACQS 1230

Query: 793  VWLRRLLNELHQQQYSPTTIYCDNRSAIALTKNPVFHGRSKHIDIKFHYI*DLATEGKIV 614
            +WLR +LN L   Q   T I+CDN S+I L+KNP+  GR KHID++FH++ DL  +G I 
Sbjct: 1231 LWLRNMLNHLSISQKGTTLIHCDNSSSIKLSKNPILRGRCKHIDVRFHFLRDLTKDGVIE 1290

Query: 613  LDYCNTEEKIADIFTKLLNAEVFYKLKEKLGV 518
            L +C ++E++AD+ TK L  + F KL++ +GV
Sbjct: 1291 LVHCKSQEQLADVMTKPLKVDTFNKLRDSIGV 1322


>KYP50361.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1310

 Score =  436 bits (1121), Expect(3) = 0.0
 Identities = 226/472 (47%), Positives = 314/472 (66%), Gaps = 17/472 (3%)
 Frame = -3

Query: 2357 LDDKGEKCIFLGYSERTKGYKLFNPVTSVVISSRDVVLSEDESWDSTKTEKTKSILDIDD 2178
            L+D+ +K IF+GY E++K YKLF+P    V+ SRDV + E + W  + + + ++  D  D
Sbjct: 694  LEDRSKKYIFIGYDEKSKAYKLFDPDNKKVVVSRDVHVEETKQWCWSNSAEVETSSDSSD 753

Query: 2177 DPLSANNDDPDVLPSPETNSVSSISPRRNPTRTRIQHTRLQDYIVAANNVVLEEDVVNFA 1998
                        +  P T + + +S   +     +Q  R++      +      +V    
Sbjct: 754  ------------IVVPSTITTTELSDEES----ELQQPRMRSLREIYDTT---SEVHAVC 794

Query: 1997 LFAGCDPLTFDEASRDDGWIQAMDAEIQAIEKNNTWKLTSLPKGKKSIGVKWVYKSKYNK 1818
            L A  + L+F++A +D+ W  AMD E +AIE+N TW+LT+LP+G + IGVKWVYK K N 
Sbjct: 795  LLADSEDLSFEKAVQDEKWRTAMDEEFEAIERNKTWELTNLPEGARPIGVKWVYKKKLNA 854

Query: 1817 DNQVDKLKARLVVKGYKQKLGVDYDEVFAPVARMETIRMVIAMAAQMKWSIFQMDVKSAF 1638
            + +V++ KARLVVKGYKQK GVDYDEVFAPV RME+IR++I++AAQ +W I QMDVKSAF
Sbjct: 855  EGEVERYKARLVVKGYKQKEGVDYDEVFAPVTRMESIRLLISLAAQRQWKILQMDVKSAF 914

Query: 1637 LNGVLKEEVYVDQPTGYVKKGHEDKVLKLNKVLYGLKQAPQAWYTRIDSYFQ*QG----- 1473
            LNGVLKEEVYV+QP GY+K+G E KVL+L K LYGLKQAP+AW  RID YF+  G     
Sbjct: 915  LNGVLKEEVYVEQPLGYMKRGEEKKVLRLRKALYGLKQAPRAWNERIDGYFKKNGYEQCP 974

Query: 1472 ------------NILVVCLYVDDVMFTGNNSNMLDEFNKEMTNRFEMTDTRFMSFFLGLE 1329
                        +++VV LYVDD++FTG+N+ ++ EF + M   FEMTD   M +FLGLE
Sbjct: 975  YEHALYIKNSGKDMMVVALYVDDLIFTGSNAKLIKEFKEIMEKEFEMTDLGLMKYFLGLE 1034

Query: 1328 VMQTTEGIFLSQKKYVGDIFKKFKMKFYNPIKTPVETRLHLNKVGKGELVNAAEYRSLVG 1149
            V Q+ EGIF+SQ++Y  +I KKFKM+  NP+ TP+E    L+K   G+  ++  YRSLVG
Sbjct: 1035 VKQSDEGIFISQERYALEILKKFKMEDCNPVSTPMEPGTKLSKFDGGDRADSGRYRSLVG 1094

Query: 1148 SLRYLTHTRPDIVFGVGLISQFMETPSEDHLQAAKRIMRHLKGTQTHGLFYT 993
            SLRYLT TRPD++  VG+ S+FME PS  H +A KRI+R+++G+ + GLFY+
Sbjct: 1095 SLRYLTSTRPDLMLSVGITSRFMEDPSYTHWKALKRILRYVRGSLSLGLFYS 1146



 Score =  415 bits (1067), Expect(3) = 0.0
 Identities = 227/560 (40%), Positives = 329/560 (58%), Gaps = 18/560 (3%)
 Frame = -1

Query: 3982 ESLSMNESEVISDYFTRVQTVVNELRSNGEILADTRIVEKIMRSLTEPFDYVVVAIEEGK 3803
            E++ M ESE +S++ TRV+TV N+L  NGE L  +R+VEKI+RSLT+ F+ +V AIEE K
Sbjct: 122  ENMRMKESEGVSEFITRVETVANKLNRNGENLPSSRVVEKILRSLTDDFENIVCAIEESK 181

Query: 3802 YMSSLTIDGLKGSLSAYEFRMKHRKPC--SLEHALRSKVVI---------TXXXXXXXXX 3656
             +S+LT++ L GSL AYE R K++K    SLE AL++K  I                   
Sbjct: 182  DLSTLTVEELTGSLEAYEQRKKNKKEKGESLEQALQAKATIKEEKVLYAQNNRGRGRGRG 241

Query: 3655 XSTPAQGGFPRKTDKSIIQCFRCKVFGHYRSECKAKFAKKHVEHSNYVELEEEEHLFFTC 3476
                 +GG   + +   I+C+ C   GH   +C+++  KK  E +N++  EE+E L    
Sbjct: 242  LGGRGRGGRGNEYECYSIKCYNCGNLGHISKDCRSE--KKKEEPTNFLAEEEDEGLLLVT 299

Query: 3475 SDDDDE-----EHLNSWYLDTGCTNHMCGNKELFLNLDESITGVVNFGNKSQVPIMG*GK 3311
            +  + E        + WYLDTG +NHMCG++ LF  L +   G V+FG+ S+V + G G 
Sbjct: 300  TIPETEIKPSCTDNSVWYLDTGASNHMCGDEHLFKMLSKEEVGSVSFGDASKVTVKGRGT 359

Query: 3310 VLLKLPSYHF--IYEVFYVPSLK*NLLSVGQLSVTGFRFIIERGVCTIETKDDEVVGTIK 3137
            +  +  +     I +V+YVP LK N+LS+GQL   G+  +++     ++ K   +V  ++
Sbjct: 360  IRYQQRNGKIGEIRDVYYVPDLKSNILSMGQLMEKGYSVLMKDRELQLKDKLGRLVAQVE 419

Query: 3136 MTDKRLFRLSLEPSAQCSLSAIATDDNWLWHFRYGHXXXXXXXXXXXXNMVTGLPLLDGV 2957
            M   R+++L L+      +     D+   WH R+GH             MV GLP ++  
Sbjct: 420  MKKNRMYKLELKIVRDECMQLDLEDEAMKWHRRFGHLHFRGLTELVKKEMVIGLPKMEFE 479

Query: 2956 DRLCQSCVRGKQHRDSFPVGKSQRAYQQLQLVHSDICGPMQTVSHGGNRDFLTFIDDYN* 2777
             + C+ CV GK  R SFP     RA +QL L+H+D+CGP+   S  G + FL+FIDD++ 
Sbjct: 480  KKFCEECVIGKHARTSFPRSSEYRAKEQLGLIHTDLCGPITPESFSGKKYFLSFIDDFSR 539

Query: 2776 KIWVYLLKQKSEAFGKFKEFKAYVENQSGSRLKVLRTDRGGEYTLMFLTFFYKDHGIKHQ 2597
            K WVY LK+K E F  FK+FK  VE ++   +K +R+DRGGE+T      + ++HGIK  
Sbjct: 540  KTWVYFLKEKLEVFETFKKFKVMVEKETSKFVKAVRSDRGGEFTSFEFNKYCEEHGIKRF 599

Query: 2596 LTASYTPQQNGVSERKNRTIVEMARSMLTNKNLSKTFWAEAVCCVVYILNRCPTKSVLNM 2417
            LTA Y+PQQNGV+ERKNRTI++M RSML  KN+ K FWAEAV C VY+ NRCP   +   
Sbjct: 600  LTAPYSPQQNGVAERKNRTILDMVRSMLKGKNMPKKFWAEAVQCAVYVQNRCPHAKLGEK 659

Query: 2416 TPEEAWSGYKPDVTSLCIFG 2357
            TP+E WSG KP V+ L +FG
Sbjct: 660  TPQEIWSGMKPSVSHLRVFG 679



 Score =  151 bits (381), Expect(3) = 0.0
 Identities = 76/166 (45%), Positives = 105/166 (63%)
 Frame = -1

Query: 1009 MGCFILQLKDSNLVGYIDSDWAGDVEDRKSTSDFVFHIGSSVVYWSSKKQQVVALSTTEA 830
            +G F  +  D  LVGY DSDW GDV+DRKSTS +VF +G++   W SKK+ +V LST EA
Sbjct: 1141 LGLFYSKSDDYRLVGYSDSDWCGDVDDRKSTSGYVFLLGNTAFTWLSKKKPIVTLSTCEA 1200

Query: 829  EYMAATSCASQVVWLRRLLNELHQQQYSPTTIYCDNRSAIALTKNPVFHGRSKHIDIKFH 650
            EY+AA+      VWL  LL  +   +     I  DN+SAI L KNPV HGRSKHID++FH
Sbjct: 1201 EYVAASWSVCHAVWLSNLLRHMGVIRDKAIVIRVDNKSAIELAKNPVNHGRSKHIDVRFH 1260

Query: 649  YI*DLATEGKIVLDYCNTEEKIADIFTKLLNAEVFYKLKEKLGVHN 512
            +I +   +GK+ L++  +  + ADIFTK L   +    K+ +G+ +
Sbjct: 1261 FIREQIGQGKVELEHVGSRVQAADIFTKSLPTTLLENCKKLIGMRD 1306


>KYP35753.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1318

 Score =  436 bits (1121), Expect(3) = 0.0
 Identities = 226/472 (47%), Positives = 314/472 (66%), Gaps = 17/472 (3%)
 Frame = -3

Query: 2357 LDDKGEKCIFLGYSERTKGYKLFNPVTSVVISSRDVVLSEDESWDSTKTEKTKSILDIDD 2178
            L+D+ +K IF+GY E++K YKLF+P    V+ SRDV + E + W  + + + ++  D  D
Sbjct: 702  LEDRSKKYIFIGYDEKSKAYKLFDPDNKKVVVSRDVHVEETKQWCWSNSAEVETSSDSSD 761

Query: 2177 DPLSANNDDPDVLPSPETNSVSSISPRRNPTRTRIQHTRLQDYIVAANNVVLEEDVVNFA 1998
                        +  P T + + +S   +     +Q  R++      +      +V    
Sbjct: 762  ------------IVVPSTITTTELSDEES----ELQQPRMRSLREIYDTT---SEVHAVC 802

Query: 1997 LFAGCDPLTFDEASRDDGWIQAMDAEIQAIEKNNTWKLTSLPKGKKSIGVKWVYKSKYNK 1818
            L A  + L+F++A +D+ W  AMD E +AIE+N TW+LT+LP+G + IGVKWVYK K N 
Sbjct: 803  LLADSEDLSFEKAVQDEKWRTAMDEEFEAIERNKTWELTNLPEGARPIGVKWVYKKKLNA 862

Query: 1817 DNQVDKLKARLVVKGYKQKLGVDYDEVFAPVARMETIRMVIAMAAQMKWSIFQMDVKSAF 1638
            + +V++ KARLVVKGYKQK GVDYDEVFAPV RME+IR++I++AAQ +W I QMDVKSAF
Sbjct: 863  EGEVERYKARLVVKGYKQKEGVDYDEVFAPVTRMESIRLLISLAAQRQWKILQMDVKSAF 922

Query: 1637 LNGVLKEEVYVDQPTGYVKKGHEDKVLKLNKVLYGLKQAPQAWYTRIDSYFQ*QG----- 1473
            LNGVLKEEVYV+QP GY+K+G E KVL+L K LYGLKQAP+AW  RID YF+  G     
Sbjct: 923  LNGVLKEEVYVEQPLGYMKRGEEKKVLRLRKALYGLKQAPRAWNERIDGYFKKNGYEQCP 982

Query: 1472 ------------NILVVCLYVDDVMFTGNNSNMLDEFNKEMTNRFEMTDTRFMSFFLGLE 1329
                        +++VV LYVDD++FTG+N+ ++ EF + M   FEMTD   M +FLGLE
Sbjct: 983  YEHALYIKNSGKDMMVVALYVDDLIFTGSNAKLIKEFKEIMEKEFEMTDLGLMKYFLGLE 1042

Query: 1328 VMQTTEGIFLSQKKYVGDIFKKFKMKFYNPIKTPVETRLHLNKVGKGELVNAAEYRSLVG 1149
            V Q+ EGIF+SQ++Y  +I KKFKM+  NP+ TP+E    L+K   G+  ++  YRSLVG
Sbjct: 1043 VKQSDEGIFISQERYALEILKKFKMEDCNPVSTPMEPGTKLSKFDGGDRADSGRYRSLVG 1102

Query: 1148 SLRYLTHTRPDIVFGVGLISQFMETPSEDHLQAAKRIMRHLKGTQTHGLFYT 993
            SLRYLT TRPD++  VG+ S+FME PS  H +A KRI+R+++G+ + GLFY+
Sbjct: 1103 SLRYLTSTRPDLMLSVGITSRFMEDPSYTHWKALKRILRYVRGSLSLGLFYS 1154



 Score =  412 bits (1058), Expect(3) = 0.0
 Identities = 227/568 (39%), Positives = 332/568 (58%), Gaps = 26/568 (4%)
 Frame = -1

Query: 3982 ESLSMNESEVISDYFTRVQTVVNELRSNGEILADTRIVEKIMRSLTEPFDYVVVAIEEGK 3803
            E++ M ESE +S++ TRV+TV N+L  NGE L  +R+VEKI+RSLT+ F+ +V AIEE K
Sbjct: 122  ENMRMKESEGVSEFITRVETVANKLNRNGENLPSSRVVEKILRSLTDDFENIVCAIEESK 181

Query: 3802 YMSSLTIDGLKGSLSAYEFRMKHRKPC--SLEHALRSKVVI---------TXXXXXXXXX 3656
             +S+LT++ L GSL AYE R K++K    SLE AL++K  I                   
Sbjct: 182  DLSTLTVEELTGSLEAYEQRKKNKKEKGESLEQALQAKATIKEEKVLYAQNNRGRGRGRG 241

Query: 3655 XSTPAQGGFPRKTDKSIIQCFRCKVFGHYRSECKAKFAKKHVEHSNYVELEEEEHLFF-- 3482
                 +GG   + +   I+C+ C   GH   +C+++  KK  E +N++  EE+E L    
Sbjct: 242  LGGRGRGGRGNEYECYSIKCYNCGNLGHISKDCRSE--KKKEEPTNFLAEEEDEGLLLVT 299

Query: 3481 ---------TCSDDDDEEHLNS--WYLDTGCTNHMCGNKELFLNLDESITGVVNFGNKSQ 3335
                     +CS +      ++  WYLDTG +NHMCG++ LF  L +   G V+FG+ S+
Sbjct: 300  TIPETEIKPSCSSEIKPSCTDNSVWYLDTGASNHMCGDEHLFKMLSKEEVGSVSFGDASK 359

Query: 3334 VPIMG*GKVLLKLPSYHF--IYEVFYVPSLK*NLLSVGQLSVTGFRFIIERGVCTIETKD 3161
            V + G G +  +  +     I +V+YVP L+ N+LS+GQL   G+  +++     ++ K 
Sbjct: 360  VTVKGRGTIRYQQRNGKIGEIRDVYYVPDLRSNILSMGQLMEKGYSVLMKDRELQLKDKL 419

Query: 3160 DEVVGTIKMTDKRLFRLSLEPSAQCSLSAIATDDNWLWHFRYGHXXXXXXXXXXXXNMVT 2981
              +V  ++M   R+++L L+      +     D+   WH R+GH             MV 
Sbjct: 420  GRLVAQVEMKKNRMYKLELKIVRDECMQLDLEDEAMKWHRRFGHLHFRGLTELVKKEMVI 479

Query: 2980 GLPLLDGVDRLCQSCVRGKQHRDSFPVGKSQRAYQQLQLVHSDICGPMQTVSHGGNRDFL 2801
            GLP ++   + C+ CV GK  R SFP     RA +QL L+H+D+CGP+   S  G + FL
Sbjct: 480  GLPKMEFEKKFCEECVIGKHARTSFPRSSEYRAKEQLGLIHTDLCGPITPESFSGKKYFL 539

Query: 2800 TFIDDYN*KIWVYLLKQKSEAFGKFKEFKAYVENQSGSRLKVLRTDRGGEYTLMFLTFFY 2621
            +FIDD++ K WVY LK+K E F  FK+FK  VE +  + +K +R+DRGGE+T +    + 
Sbjct: 540  SFIDDFSRKTWVYFLKEKLEVFETFKKFKVMVEKEMSTFVKAVRSDRGGEFTSVEFNKYC 599

Query: 2620 KDHGIKHQLTASYTPQQNGVSERKNRTIVEMARSMLTNKNLSKTFWAEAVCCVVYILNRC 2441
            ++HGIK  LTA Y+PQQNGV+ERKNRTI++M RSML  KN+ K FWAEAV C VY+ NRC
Sbjct: 600  EEHGIKRFLTAPYSPQQNGVAERKNRTILDMVRSMLKGKNMPKKFWAEAVQCAVYVQNRC 659

Query: 2440 PTKSVLNMTPEEAWSGYKPDVTSLCIFG 2357
            P   +   TP+E WSG KP V+ L +FG
Sbjct: 660  PHAKLGEKTPQEIWSGMKPSVSHLRVFG 687



 Score =  152 bits (385), Expect(3) = 0.0
 Identities = 77/166 (46%), Positives = 105/166 (63%)
 Frame = -1

Query: 1009 MGCFILQLKDSNLVGYIDSDWAGDVEDRKSTSDFVFHIGSSVVYWSSKKQQVVALSTTEA 830
            +G F  +  D  LVGY DSDW GDV+DRKSTS +VF +G++   W SKKQ +V LST EA
Sbjct: 1149 LGLFYSKSDDYRLVGYSDSDWCGDVDDRKSTSGYVFLLGNTAFTWLSKKQPIVTLSTCEA 1208

Query: 829  EYMAATSCASQVVWLRRLLNELHQQQYSPTTIYCDNRSAIALTKNPVFHGRSKHIDIKFH 650
            EY+AA+      VWL  LL  +   +     I  DN+SAI L KNPV HGRSKHID++FH
Sbjct: 1209 EYVAASWSVCHAVWLSNLLRHMGVIRDEAIVIRVDNKSAIELAKNPVNHGRSKHIDVRFH 1268

Query: 649  YI*DLATEGKIVLDYCNTEEKIADIFTKLLNAEVFYKLKEKLGVHN 512
            +I +   +GK+ L++  +  + ADIFTK L   +    K+ +G+ +
Sbjct: 1269 FIREQIRQGKVELEHVGSRVQAADIFTKPLPTTLLENCKKLIGMRD 1314


>KYP39660.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1195

 Score =  436 bits (1121), Expect(3) = 0.0
 Identities = 226/472 (47%), Positives = 314/472 (66%), Gaps = 17/472 (3%)
 Frame = -3

Query: 2357 LDDKGEKCIFLGYSERTKGYKLFNPVTSVVISSRDVVLSEDESWDSTKTEKTKSILDIDD 2178
            L+D+ +K IF+GY E++K YKLF+P    V+ SRDV + E + W  + + + ++  D  D
Sbjct: 579  LEDRSKKYIFIGYDEKSKAYKLFDPDNKKVVVSRDVHVEETKQWCWSNSAEVETSSDSSD 638

Query: 2177 DPLSANNDDPDVLPSPETNSVSSISPRRNPTRTRIQHTRLQDYIVAANNVVLEEDVVNFA 1998
                        +  P T + + +S   +     +Q  R++      +      +V    
Sbjct: 639  ------------IVVPSTITTTELSDEES----ELQQPRMRSLREIYDTT---SEVHAVC 679

Query: 1997 LFAGCDPLTFDEASRDDGWIQAMDAEIQAIEKNNTWKLTSLPKGKKSIGVKWVYKSKYNK 1818
            L A  + L+F++A +D+ W  AMD E +AIE+N TW+LT+LP+G + IGVKWVYK K N 
Sbjct: 680  LLADSEDLSFEKAVQDEKWRTAMDEEFEAIERNKTWELTNLPEGARPIGVKWVYKKKMNA 739

Query: 1817 DNQVDKLKARLVVKGYKQKLGVDYDEVFAPVARMETIRMVIAMAAQMKWSIFQMDVKSAF 1638
            + +V++ KARLVVKGYKQK GVDYDEVFAPV RME+IR++I++AAQ +W I QMDVKSAF
Sbjct: 740  EGEVERYKARLVVKGYKQKEGVDYDEVFAPVTRMESIRLLISLAAQRQWKILQMDVKSAF 799

Query: 1637 LNGVLKEEVYVDQPTGYVKKGHEDKVLKLNKVLYGLKQAPQAWYTRIDSYFQ*QG----- 1473
            LNGVLKEEVYV+QP GY+K+G E KVL+L K LYGLKQAP+AW  RID YF+  G     
Sbjct: 800  LNGVLKEEVYVEQPLGYMKRGEEKKVLRLRKALYGLKQAPRAWNERIDGYFKKNGYEQCP 859

Query: 1472 ------------NILVVCLYVDDVMFTGNNSNMLDEFNKEMTNRFEMTDTRFMSFFLGLE 1329
                        +++VV LYVDD++FTG+N+ ++ EF + M   FEMTD   M +FLGLE
Sbjct: 860  YEHALYIKNSGKDMMVVALYVDDLIFTGSNAKLIKEFKEIMEKEFEMTDLGLMKYFLGLE 919

Query: 1328 VMQTTEGIFLSQKKYVGDIFKKFKMKFYNPIKTPVETRLHLNKVGKGELVNAAEYRSLVG 1149
            V Q+ EGIF+SQ++Y  +I KKFKM+  NP+ TP+E    L+K   G+  ++  YRSLVG
Sbjct: 920  VKQSDEGIFISQERYALEILKKFKMEDCNPVSTPMEPGTKLSKFDGGDRADSGRYRSLVG 979

Query: 1148 SLRYLTHTRPDIVFGVGLISQFMETPSEDHLQAAKRIMRHLKGTQTHGLFYT 993
            SLRYLT TRPD++  VG+ S+FME PS  H +A KRI+R+++G+ + GLFY+
Sbjct: 980  SLRYLTSTRPDLMLSVGITSRFMEDPSYTHWKALKRILRYVRGSLSLGLFYS 1031



 Score =  408 bits (1048), Expect(3) = 0.0
 Identities = 226/566 (39%), Positives = 327/566 (57%), Gaps = 26/566 (4%)
 Frame = -1

Query: 3976 LSMNESEVISDYFTRVQTVVNELRSNGEILADTRIVEKIMRSLTEPFDYVVVAIEEGKYM 3797
            + M ESE +S++ TRV+TV N+L  NGE L   R+VEKI+RSLT+ F+ +V AIEE K +
Sbjct: 1    MRMKESEGVSEFITRVETVANKLNRNGENLPSNRVVEKILRSLTDDFENIVCAIEESKDL 60

Query: 3796 SSLTIDGLKGSLSAYEFRMKHRKPC--SLEHALRSKVVI---------TXXXXXXXXXXS 3650
            S LT++ L GSL AYE R K++K    SLE AL++K  I                     
Sbjct: 61   SMLTVEELTGSLEAYEQRKKNKKEKGESLEQALQAKATIKEEKVLYAQNNRGRGRGRGLG 120

Query: 3649 TPAQGGFPRKTDKSIIQCFRCKVFGHYRSECKAKFAKKHVEHSNYVELEEEEHLFF---- 3482
               +GG   + +   I+C+ C   GH   +C+++  KK  E +N++  EE+E L      
Sbjct: 121  GRGRGGRGNEYECYSIKCYNCGNLGHISKDCRSE--KKKEEPTNFLAEEEDEGLLLVTTI 178

Query: 3481 -------TCSDDDDEEHLNS--WYLDTGCTNHMCGNKELFLNLDESITGVVNFGNKSQVP 3329
                   +CS +      ++  WYLDTG +NHMCG++ LF  L +   G V+FG+ S+V 
Sbjct: 179  PETEIKPSCSSEIKPSCTDNSVWYLDTGASNHMCGDEHLFKMLSKEEVGSVSFGDASKVT 238

Query: 3328 IMG*GKVLLKLPSYHF--IYEVFYVPSLK*NLLSVGQLSVTGFRFIIERGVCTIETKDDE 3155
            + G G +  +  +     I +V+YVP LK N+LS+GQL   G+  +++     ++ K   
Sbjct: 239  VKGRGTIRYQQRNGKIGEIRDVYYVPDLKSNILSMGQLMEKGYSVLMKDRELQLKDKLGR 298

Query: 3154 VVGTIKMTDKRLFRLSLEPSAQCSLSAIATDDNWLWHFRYGHXXXXXXXXXXXXNMVTGL 2975
            +V  ++M   R+++L L+      +     D+   WH R+GH             MV GL
Sbjct: 299  LVAQVEMKKNRMYKLELKIVRDECMQLDLEDEAMKWHRRFGHLHFRGLTELVKKEMVIGL 358

Query: 2974 PLLDGVDRLCQSCVRGKQHRDSFPVGKSQRAYQQLQLVHSDICGPMQTVSHGGNRDFLTF 2795
            P ++   + C+ CV GK  R SFP     RA +QL L+H+D+CGP+   S  G + F++F
Sbjct: 359  PKMEFEKKFCEECVIGKHARTSFPRSSEYRAKEQLGLIHTDLCGPITPESFSGKKYFVSF 418

Query: 2794 IDDYN*KIWVYLLKQKSEAFGKFKEFKAYVENQSGSRLKVLRTDRGGEYTLMFLTFFYKD 2615
            IDD++ K WVY LK+K E F  FK+FK  VE +  + +K +R+DRGGE+T      + ++
Sbjct: 419  IDDFSRKTWVYFLKEKLEVFETFKKFKVMVEKEMSTFVKAVRSDRGGEFTSFEFNKYCEE 478

Query: 2614 HGIKHQLTASYTPQQNGVSERKNRTIVEMARSMLTNKNLSKTFWAEAVCCVVYILNRCPT 2435
            HGIK  LTA Y+PQQNGV+ERKNRTI++M RSML  KN+ K FWAEAV C VY+ NRCP 
Sbjct: 479  HGIKRFLTAPYSPQQNGVAERKNRTILDMVRSMLKGKNMPKKFWAEAVQCAVYVQNRCPH 538

Query: 2434 KSVLNMTPEEAWSGYKPDVTSLCIFG 2357
              +   TP+E WSG KP V+ L +FG
Sbjct: 539  AKLGEKTPQEIWSGMKPSVSHLRVFG 564



 Score =  152 bits (385), Expect(3) = 0.0
 Identities = 77/166 (46%), Positives = 105/166 (63%)
 Frame = -1

Query: 1009 MGCFILQLKDSNLVGYIDSDWAGDVEDRKSTSDFVFHIGSSVVYWSSKKQQVVALSTTEA 830
            +G F  +  D  LVGY DSDW GDV+DRKSTS +VF +G++   W SKKQ +V LST EA
Sbjct: 1026 LGLFYSKSDDYRLVGYSDSDWCGDVDDRKSTSGYVFLLGNTAFTWLSKKQPIVTLSTCEA 1085

Query: 829  EYMAATSCASQVVWLRRLLNELHQQQYSPTTIYCDNRSAIALTKNPVFHGRSKHIDIKFH 650
            EY+AA+      VWL  LL  +   +     I  DN+SAI L KNPV HGRSKHID++FH
Sbjct: 1086 EYVAASWSVCHAVWLSNLLRHMGVIRDEAIVIRVDNKSAIELAKNPVNHGRSKHIDVRFH 1145

Query: 649  YI*DLATEGKIVLDYCNTEEKIADIFTKLLNAEVFYKLKEKLGVHN 512
            +I +   +GK+ L++  +  + ADIFTK L   +    K+ +G+ +
Sbjct: 1146 FIREQIRQGKVELEHVGSRVQAADIFTKPLPTTLLENCKKLIGMRD 1191


>GAU26746.1 hypothetical protein TSUD_317440 [Trifolium subterraneum]
          Length = 1608

 Score =  432 bits (1110), Expect(3) = 0.0
 Identities = 226/494 (45%), Positives = 311/494 (62%), Gaps = 40/494 (8%)
 Frame = -3

Query: 2357 LDDKGEKCIFLGYSERTKGYKLFNPVTSVVISSRDVVLSEDESWDSTKTEKTKSILDIDD 2178
            LDDK ++C+FLG S+ +K YKLF+P+   VI +RDVV  ED+SWD  +TE+   +  +D 
Sbjct: 681  LDDKSKRCVFLGVSDESKAYKLFDPIEKKVIVNRDVVFEEDKSWDWGRTEEECKVDVLDW 740

Query: 2177 DPLSANNDDPDVLPSPETNS--------VSSISPRRNPT---------------RTRIQH 2067
            +    + +D     + E NS         SS++   +PT               R+R + 
Sbjct: 741  EENEEDGEDHGTAQNEEENSGDINQGASPSSLNKTGSPTNETNDVEQEFLERAARSRRRP 800

Query: 2066 TRLQDYIVAANNVVLEEDVVNFALFAGCDPLTFDEASRDDGWIQAMDAEIQAIEKNNTWK 1887
              L D+    N    E  +V      G DP  F+EA +   W +AM+ E++AIEKN TW 
Sbjct: 801  GWLVDFEEDPNLSEEESLMVMMTAENGSDPYLFEEAFKSAKWREAMNMEMKAIEKNKTWV 860

Query: 1886 LTSLPKGKKSIGVKWVYKSKYNKDNQVDKLKARLVVKGYKQKLGVDYDEVFAPVARMETI 1707
            LT  P+G K IGVKW++K+K N+  +V+K KARLV KGY Q+ GVDY EVFAPVAR++T+
Sbjct: 861  LTDAPRGVKPIGVKWIFKTKLNESGKVEKFKARLVAKGYAQQYGVDYTEVFAPVARLDTV 920

Query: 1706 RMVIAMAAQMKWSIFQMDVKSAFLNGVLKEEVYVDQPTGYVKKGHEDKVLKLNKVLYGLK 1527
            R+++A+AAQ  W +FQ+DVKSAFL+G LKEEV+V QP G+VKKG E+KV KL K LYGLK
Sbjct: 921  RVLLALAAQRGWEVFQLDVKSAFLHGELKEEVFVQQPEGFVKKGEENKVYKLKKALYGLK 980

Query: 1526 QAPQAWYTRIDSYF-----------------Q*QGNILVVCLYVDDVMFTGNNSNMLDEF 1398
            QAP+AWY +I++YF                 + +GNIL+V LYVDD++FTGNN  M DEF
Sbjct: 981  QAPRAWYNKIEAYFAKENFERCSSEHTLFTKKNEGNILIVSLYVDDLIFTGNNKRMCDEF 1040

Query: 1397 NKEMTNRFEMTDTRFMSFFLGLEVMQTTEGIFLSQKKYVGDIFKKFKMKFYNPIKTPVET 1218
               M   F+MTD   M +FLG+EV+Q   GIF+ Q++Y  ++  +F M   NP++ P+  
Sbjct: 1041 KSSMKLDFDMTDLGRMRYFLGIEVIQCEAGIFICQRRYAREVLARFNMGSSNPVRNPIVP 1100

Query: 1217 RLHLNKVGKGELVNAAEYRSLVGSLRYLTHTRPDIVFGVGLISQFMETPSEDHLQAAKRI 1038
              +L+K   G  V+   ++  VGSL YLT TRPD++FGV LIS+FM  P E H  A KR+
Sbjct: 1101 GTNLSKDEDGAEVDVTMFKQAVGSLMYLTVTRPDLMFGVSLISRFMANPKESHWAATKRL 1160

Query: 1037 MRHLKGTQTHGLFY 996
            +R+LKGT  HG+FY
Sbjct: 1161 LRYLKGTTDHGIFY 1174



 Score =  392 bits (1008), Expect(3) = 0.0
 Identities = 219/555 (39%), Positives = 320/555 (57%), Gaps = 12/555 (2%)
 Frame = -1

Query: 3985 FESLSMNESEVISDYFTRVQTVVNELRSNGEILADTRIVEKIMRSLTEPFDYVVVAIEEG 3806
            FE L+M E E +  +  R   VVN+++SNGE +  + +V KI+RSLT  F+YVV +IEE 
Sbjct: 122  FELLTMKEGEKVDSFLGRTLHVVNKMKSNGETMEQSTVVSKILRSLTSKFNYVVCSIEES 181

Query: 3805 KYMSSLTIDGLKGSLSAYEFRMKHRKPCSLEHALRSKVVITXXXXXXXXXXSTPAQGGFP 3626
              +S+L+ID L GSL  +E RM+  +  + EH L+   + +              +GG  
Sbjct: 182  NDLSTLSIDELHGSLLVHEQRMQGFQ--AEEHVLK---ITSDDRPVRGRGGRGLYRGGRG 236

Query: 3625 R-----KTDKSIIQCFRCKVFGHYRSECKAKFAKKHVEHSNYVELEEEEHLFFTCSDD-D 3464
            R       +++ I+CF+C   GH++ EC     K     +NY ELEEEE L     ++  
Sbjct: 237  RGRGRQSLNRATIECFKCHKLGHFQYECPDWENK-----ANYAELEEEEELLLMAYEELR 291

Query: 3463 DEEHLNSWYLDTGCTNHMCGNKELFLNLDESITGVVNFGNKSQVPIMG*GKVLLKLPSY- 3287
                  +W+LD+GC+NHM GNK+ F  ++E     V  GN + + ++  G + +++    
Sbjct: 292  QPSQEEAWFLDSGCSNHMTGNKKWFSEMEEGFCRTVKLGNDTTMAVVAKGSIRVQINGVT 351

Query: 3286 HFIYEVFYVPSLK*NLLSVGQLSVTGFRFIIERGVCTIETKDDEVVGTIKMTDKRLFRLS 3107
              I +V++VP LK NLLS+GQL   G   +I+   C +   D  ++    M   R+F L+
Sbjct: 352  QVISDVYFVPELKNNLLSLGQLQEKGLAILIQNNTCKVFHPDKGLIMHTSMKGNRMFYLT 411

Query: 3106 LEPS----AQCSLSAIATD-DNWLWHFRYGHXXXXXXXXXXXXNMVTGLPLLDGVDRLCQ 2942
            +  +    + C  + + ++ +  LWH R+GH             MV GLP L    ++C 
Sbjct: 412  VSAAPNKHSMCLQAEMMSEKETQLWHSRFGHLNYKGLNTLSNKKMVIGLPSLKSPKKICT 471

Query: 2941 SCVRGKQHRDSFPVGKSQRAYQQLQLVHSDICGPMQTVSHGGNRDFLTFIDDYN*KIWVY 2762
            +C+ GKQHR+S P   S RA ++LQLVH+DICGP+   S+   R  L+FIDD+  K W+Y
Sbjct: 472  TCLIGKQHRESIPKKSSWRASKKLQLVHADICGPITPSSNSNKRYILSFIDDFTRKAWIY 531

Query: 2761 LLKQKSEAFGKFKEFKAYVENQSGSRLKVLRTDRGGEYTLMFLTFFYKDHGIKHQLTASY 2582
             L +KSEAFG+FK FKA VE + G+ +  LRTDRGGE+       F KD GI  QLTASY
Sbjct: 532  FLHEKSEAFGRFKNFKACVEKEVGAFITCLRTDRGGEFISNEFEEFCKDQGICRQLTASY 591

Query: 2581 TPQQNGVSERKNRTIVEMARSMLTNKNLSKTFWAEAVCCVVYILNRCPTKSVLNMTPEEA 2402
            TPQQNGV+ERKNRTI+   R++L  + + + FW EAV   V++ NR PT +V ++TPEEA
Sbjct: 592  TPQQNGVAERKNRTIMNAVRAVLNERQVPRVFWPEAVKWCVHVQNRSPTSAVDHITPEEA 651

Query: 2401 WSGYKPDVTSLCIFG 2357
            W+G +P V    IFG
Sbjct: 652  WTGVRPSVDYFRIFG 666



 Score =  171 bits (432), Expect(3) = 0.0
 Identities = 84/157 (53%), Positives = 110/157 (70%)
 Frame = -1

Query: 973  LVGYIDSDWAGDVEDRKSTSDFVFHIGSSVVYWSSKKQQVVALSTTEAEYMAATSCASQV 794
            L+ Y DS++AGD++DR+STS  VF +GS  V W SKKQ VV+LSTTEAEY+AA  CA Q 
Sbjct: 1183 LIAYSDSNYAGDLDDRRSTSGLVFMMGSGAVSWVSKKQPVVSLSTTEAEYIAAALCACQC 1242

Query: 793  VWLRRLLNELHQQQYSPTTIYCDNRSAIALTKNPVFHGRSKHIDIKFHYI*DLATEGKIV 614
            +WLRR+L +L  ++   T I CDN S I L+KN +FHGRSKHI ++FH++ DL  +  + 
Sbjct: 1243 IWLRRILEQLGAEEKKETVILCDNSSTIQLSKNLMFHGRSKHIAVRFHFLRDLVNDEVVR 1302

Query: 613  LDYCNTEEKIADIFTKLLNAEVFYKLKEKLGVHNSNE 503
            L +C +EE+IADI TK L  E F KL+  LGV    E
Sbjct: 1303 LSFCCSEEQIADIMTKPLKLEQFEKLRSMLGVMKITE 1339


>GAU23361.1 hypothetical protein TSUD_334080 [Trifolium subterraneum]
          Length = 1322

 Score =  405 bits (1040), Expect(3) = 0.0
 Identities = 217/489 (44%), Positives = 307/489 (62%), Gaps = 35/489 (7%)
 Frame = -3

Query: 2357 LDDKGEKCIFLGYSERTKGYKLFNPVTSVVISSRDVVLSEDESWDSTKTEKTKSILDIDD 2178
            LDDK  KCI LG SE +KGYKL++PV   VI S+DVV  E + W+     K++  +DI  
Sbjct: 668  LDDKSIKCILLGLSEESKGYKLYDPVNKRVIVSKDVVFEESKGWNWNNDSKSQKQIDITS 727

Query: 2177 DPLSAN-NDDPDVLP---------------SPETNSVSSISPRRNPT-RTRIQHTRLQDY 2049
                 N N+D +++P               SPET+     +     T R + +   L DY
Sbjct: 728  TTDEGNSNEDHEIVPDDEVSDEGFEANNNSSPETDMTGESTDSEELTPRVKRKPGYLNDY 787

Query: 2048 IVAANNVVLEEDVVNFALFAGC-DPLTFDEASRDDGWIQAMDAEIQAIEKNNTWKLTSLP 1872
            +         + + N A+F+   DP  +DEA ++  W +AMD EI++IE+N+TW+L +LP
Sbjct: 788  VTGEELDEETQHLQNLAMFSTKEDPTNYDEAIKNGVWKKAMDQEIESIERNDTWELVTLP 847

Query: 1871 KGKKSIGVKWVYKSKYNKDNQVDKLKARLVVKGYKQKLGVDYDEVFAPVARMETIRMVIA 1692
             G K IGVKW+YK+KYN+  +V+K KARLV KGY Q+ G+DY+EVFAPVAR +TIR +++
Sbjct: 848  AGAKKIGVKWIYKTKYNEKGEVEKYKARLVAKGYSQQQGIDYNEVFAPVARWDTIRTILS 907

Query: 1691 MAAQMKWSIFQMDVKSAFLNGVLKEEVYVDQPTGYVKKGHEDKVLKLNKVLYGLKQAPQA 1512
            +AA   WS++Q+DVKSAFL+G L E VYVDQP GY +K  + KV KL K LYGLKQAP+A
Sbjct: 908  LAASQNWSVYQLDVKSAFLHGELVENVYVDQPLGY-QKEEKGKVYKLKKALYGLKQAPRA 966

Query: 1511 WYTRIDSYF-----------------Q*QGNILVVCLYVDDVMFTGNNSNMLDEFNKEMT 1383
            WY++I+SYF                 + +  +L+V LYVDD+++TGN+  M + F   M 
Sbjct: 967  WYSKIESYFGQEKFEKCPYEHTLFVKRNKEKLLIVSLYVDDLIYTGNDVEMFNNFKDSMQ 1026

Query: 1382 NRFEMTDTRFMSFFLGLEVMQTTEGIFLSQKKYVGDIFKKFKMKFYNPIKTPVETRLHLN 1203
             +F MTD   M FFLG+EV Q   GIF++Q+KYV +I  +F M+  N + +P+     L 
Sbjct: 1027 KKFAMTDLGKMRFFLGVEVTQGEFGIFINQQKYVKEILSRFGMEACNMVCSPMVPGNKLM 1086

Query: 1202 KVGKGELVNAAEYRSLVGSLRYLTHTRPDIVFGVGLISQFMETPSEDHLQAAKRIMRHLK 1023
            K  +G  V++ +Y+ +VG L YL  TRPD+ F V LI+++ME P+E HL AAKRI+R+LK
Sbjct: 1087 KDEEGSAVDSTKYKQMVGCLMYLLATRPDLAFSVCLIARYMERPTEMHLAAAKRILRYLK 1146

Query: 1022 GTQTHGLFY 996
            G+   G+ Y
Sbjct: 1147 GSMNLGILY 1155



 Score =  396 bits (1018), Expect(3) = 0.0
 Identities = 215/545 (39%), Positives = 308/545 (56%), Gaps = 2/545 (0%)
 Frame = -1

Query: 3985 FESLSMNESEVISDYFTRVQTVVNELRSNGEILADTRIVEKIMRSLTEPFDYVVVAIEEG 3806
            FE L+M + E +SDYF R   + N + ++GE +    IVEKI+RSLT  F+YVV +IEE 
Sbjct: 114  FEVLAMKDGESVSDYFARTLAIANRMTAHGETVQQLVIVEKILRSLTPKFNYVVCSIEEA 173

Query: 3805 KYMSSLTIDGLKGSLSAYEFRMKHRKPCSLEHALRSKVVITXXXXXXXXXXSTPAQGGFP 3626
              ++ L+ID L+ SL   E R++ +     E AL+                   A+G   
Sbjct: 174  NDVTQLSIDELQSSLLVQEQRLQAQSTKDEEQALKV-ASYGRGGGTRGRGRGGGARGRGR 232

Query: 3625 RKTDKSIIQCFRCKVFGHYRSECKAKFAKKHVEHSNYVELEEEEHLFFTCSDDDDEEHLN 3446
             + +K  I+C+RC   GHY+ EC     K     +NY   +  E +        + +  +
Sbjct: 233  GRVNKENIECYRCHKLGHYQHECPTWEEKD----ANYAAYDSHEEILLMAKHGIETDARD 288

Query: 3445 S-WYLDTGCTNHMCGNKELFLNLDESITGVVNFGNKSQVPIMG*GKVLLKLPSY-HFIYE 3272
              W+LD+GC+NHM G +E   + D++I   V  G+ S++ I+G G + L +      I +
Sbjct: 289  EVWFLDSGCSNHMVGTREWLFDFDDNIRESVKLGDDSRMQILGKGNLKLCIGGITQVISD 348

Query: 3271 VFYVPSLK*NLLSVGQLSVTGFRFIIERGVCTIETKDDEVVGTIKMTDKRLFRLSLEPSA 3092
            V+Y+P LK NLLS+GQL       + ++  C +      ++   KM+  R++ +      
Sbjct: 349  VYYIPGLKNNLLSIGQLQQKDLTIVFKQDFCKVYHPQRGLIMATKMSANRMYIIYAPVII 408

Query: 3091 QCSLSAIATDDNWLWHFRYGHXXXXXXXXXXXXNMVTGLPLLDGVDRLCQSCVRGKQHRD 2912
               L  +  D+N LWH RYGH            +MV GLP L      C +C+ GKQHR+
Sbjct: 409  PMCLKTVKMDNNELWHCRYGHLSFKGLNTLVKKDMVRGLPQLQETTENCTNCMTGKQHRE 468

Query: 2911 SFPVGKSQRAYQQLQLVHSDICGPMQTVSHGGNRDFLTFIDDYN*KIWVYLLKQKSEAFG 2732
            + P   + RA ++L+LVHSDICGP+   S+GG R F+TF DD++ K W YLL  K+ AF 
Sbjct: 469  AIPKSSNWRASKKLELVHSDICGPITPQSNGGIRYFMTFTDDFSRKTWTYLLSDKASAFD 528

Query: 2731 KFKEFKAYVENQSGSRLKVLRTDRGGEYTLMFLTFFYKDHGIKHQLTASYTPQQNGVSER 2552
             FK+FK  VE +S  ++  LRTDRGGE+T      F  +HGIK QLT +YTPQQNGVSER
Sbjct: 529  VFKKFKVLVEKESNCQIMCLRTDRGGEFTSNNFNEFCSNHGIKRQLTTAYTPQQNGVSER 588

Query: 2551 KNRTIVEMARSMLTNKNLSKTFWAEAVCCVVYILNRCPTKSVLNMTPEEAWSGYKPDVTS 2372
            KNRT++ M RSM+  +N+ K+FW EA+    Y+LNR PT +V ++TPEEAWSG KP V  
Sbjct: 589  KNRTLLNMIRSMMAGRNVPKSFWPEALKWSTYVLNRSPTLAVKDITPEEAWSGSKPTVHH 648

Query: 2371 LCIFG 2357
              IFG
Sbjct: 649  FRIFG 653



 Score =  188 bits (478), Expect(3) = 0.0
 Identities = 89/152 (58%), Positives = 116/152 (76%)
 Frame = -1

Query: 973  LVGYIDSDWAGDVEDRKSTSDFVFHIGSSVVYWSSKKQQVVALSTTEAEYMAATSCASQV 794
            L G+ DSD+AGD+ DRKSTS +VF +GSS + WSSKKQ +V LSTTEAE++AA SCA Q 
Sbjct: 1163 LKGWTDSDYAGDLNDRKSTSGYVFKVGSSAISWSSKKQPIVTLSTTEAEFVAAASCACQG 1222

Query: 793  VWLRRLLNELHQQQYSPTTIYCDNRSAIALTKNPVFHGRSKHIDIKFHYI*DLATEGKIV 614
            VWL+R+L++L Q Q   T IYCDN S+I L+KNPV HGR KHID++++++ DL  +  + 
Sbjct: 1223 VWLKRILHQLGQTQDKSTIIYCDNTSSIKLSKNPVMHGRCKHIDVRYYFLRDLVKDDVLE 1282

Query: 613  LDYCNTEEKIADIFTKLLNAEVFYKLKEKLGV 518
            L +CNTEE+IADI TK L  + FYK +E LGV
Sbjct: 1283 LKHCNTEEQIADIMTKPLKLDSFYKFREMLGV 1314


>GAU23220.1 hypothetical protein TSUD_172480 [Trifolium subterraneum]
          Length = 1323

 Score =  410 bits (1053), Expect(3) = 0.0
 Identities = 227/550 (41%), Positives = 311/550 (56%), Gaps = 7/550 (1%)
 Frame = -1

Query: 3985 FESLSMNESEVISDYFTRVQTVVNELRSNGEILADTRIVEKIMRSLTEPFDYVVVAIEEG 3806
            FE L M + E ++D+F+R   + N++ ++GE L   +IVEKI+RS++  F+YVV +IE+ 
Sbjct: 119  FEVLWMKDDESVNDFFSRTLVIANKMTAHGESLDQGQIVEKILRSMSTKFEYVVCSIEQS 178

Query: 3805 KYMSSLTIDGLKGSLSAYEFRMKHRKPCSLEHALRSKVVITXXXXXXXXXXSTPAQGGFP 3626
               S+++ID L+ SL  +E RM H K    E AL+   +            ++    G  
Sbjct: 179  CDTSTMSIDELQSSLLVHEGRMNHHKAKQEEQALKITNLGRGNGNARGRGRNSYRGRGRG 238

Query: 3625 RKT-DKSIIQCFRCKVFGHYRSEC-----KAKFAKKHVEHSNYVELEEEEHLFFTCSDDD 3464
            R T  K  ++C++C   GHY++EC      A FA +  EH   + L  ++H     SD  
Sbjct: 239  RNTISKEHVECYKCHRLGHYQNECPTWEENANFAYEFNEHEEIL-LMTQQHTHTNTSDQ- 296

Query: 3463 DEEHLNSWYLDTGCTNHMCGNKELFLNLDESITGVVNFGNKSQVPIMG*GKVLLKLPSY- 3287
                   W+LD+GC+NHM G KE   N D+     V  G+ S + +MG G V L L    
Sbjct: 297  ------VWFLDSGCSNHMIGTKEWLFNFDDKFRETVKLGDNSTMQVMGKGNVKLYLAGQV 350

Query: 3286 HFIYEVFYVPSLK*NLLSVGQLSVTGFRFIIERGVCTIETKDDEVVGTIKMTDKRLFRLS 3107
              I +V+Y+P LK NLLS+GQL       +  + VC I  +   ++ T +MT  R++ + 
Sbjct: 351  TVISDVYYLPDLKNNLLSIGQLQQKNLTIVFSKDVCKIFHEGKGLIVTTQMTVNRMYIIL 410

Query: 3106 LEPSAQCSLSAIATDDNWLWHFRYGHXXXXXXXXXXXXNMVTGLPLLDGVDRLCQSCVRG 2927
                          D+  LWH RYGH             MV GLP++     +C  CV  
Sbjct: 411  APVMLPACFKVSNQDEGHLWHCRYGHLSFKGLNTLAKREMVKGLPMVKDDQTVCSDCVVS 470

Query: 2926 KQHRDSFPVGKSQRAYQQLQLVHSDICGPMQTVSHGGNRDFLTFIDDYN*KIWVYLLKQK 2747
            KQHRD+FP   S RA  +L+LVHSDICGP+   S+GG++ F+TF DD   K W Y LK K
Sbjct: 471  KQHRDTFPKIASWRATSKLELVHSDICGPINPTSNGGSKYFITFTDDLTRKTWTYPLKDK 530

Query: 2746 SEAFGKFKEFKAYVENQSGSRLKVLRTDRGGEYTLMFLTFFYKDHGIKHQLTASYTPQQN 2567
            + AF  F++FKA VE +S   +K LRTDRGGE+T      F  +HGIK QLTA+YTPQQN
Sbjct: 531  ASAFDCFRKFKALVEKESDCTIKCLRTDRGGEFTSSKFNEFCSEHGIKRQLTAAYTPQQN 590

Query: 2566 GVSERKNRTIVEMARSMLTNKNLSKTFWAEAVCCVVYILNRCPTKSVLNMTPEEAWSGYK 2387
            GVSERKN T++ M RSML  K++ K FW EAV    Y++NR PT SV N+TPEEAWSG K
Sbjct: 591  GVSERKNITLLNMVRSMLVGKHVPKLFWPEAVVWATYVINRSPTLSVKNVTPEEAWSGTK 650

Query: 2386 PDVTSLCIFG 2357
            P V+   IFG
Sbjct: 651  PSVSHFKIFG 660



 Score =  388 bits (996), Expect(3) = 0.0
 Identities = 206/490 (42%), Positives = 305/490 (62%), Gaps = 36/490 (7%)
 Frame = -3

Query: 2357 LDDKGEKCIFLGYSERTKGYKLFNPVTSVVISSRDVVLSEDESWDSTKTEKTKSIL---- 2190
            LD KG KC+ LG SE +K YKL++P+   +I SRDV+  E+  W+  +  K +S      
Sbjct: 675  LDPKGIKCVHLGVSEESKAYKLYDPIQKKIIISRDVISDENSCWNWDEKHKAQSSQLEEE 734

Query: 2189 -----------DIDDDPLSANNDD--PDVLPSPETNSVSSISPRRNPTRTRIQHTRLQDY 2049
                       +IDD  ++  N+    +     +++  ++ + R+ P RTR     + DY
Sbjct: 735  TISEYEQESTPEIDDQGINIENEQGHEETEEDNDSDEGNNGATRQLPPRTRNPPGWVHDY 794

Query: 2048 IVAANNVVLEEDVVNFALFA-GCDPLTFDEASRDDGWIQAMDAEIQAIEKNNTWKLTSLP 1872
            +    +  +++ + N A+F    DP T++EAS+   W +AMD EI++IE+N+TW+L +LP
Sbjct: 795  VTNLEDSDIDQ-MQNLAVFCDNSDPHTYEEASKMTVWRKAMDQEIESIERNDTWELVTLP 853

Query: 1871 KGKKSIGVKWVYKSKYNKDNQVDKLKARLVVKGYKQKLGVDYDEVFAPVARMETIRMVIA 1692
            +  K IGVKW++K+KYN++ +++K KARLV KGY Q+ G+D++EVFAPVAR +TIR ++A
Sbjct: 854  REAKRIGVKWIFKTKYNENGEIEKYKARLVAKGYSQQHGIDFNEVFAPVARWDTIRTILA 913

Query: 1691 MAAQMKWSIFQMDVKSAFLNGVLKEEVYVDQPTGYVKKGHEDKVLKLNKVLYGLKQAPQA 1512
            +AA   W ++Q DVKSAFL+G L+E VY+DQP GY +      V KL K LYGLKQAP+A
Sbjct: 914  VAASQGWFVYQFDVKSAFLHGELQENVYIDQPPGYGR--GNGMVYKLKKALYGLKQAPRA 971

Query: 1511 WYTRIDSYF------------------Q*QGNILVVCLYVDDVMFTGNNSNMLDEFNKEM 1386
            WY++I+SYF                     G+IL+V LYVDD++FTGNN  M + F K M
Sbjct: 972  WYSKIESYFVQENFVKCPHEHTLFVKQDKDGSILIVSLYVDDLIFTGNNEAMFESFKKSM 1031

Query: 1385 TNRFEMTDTRFMSFFLGLEVMQTTEGIFLSQKKYVGDIFKKFKMKFYNPIKTPVETRLHL 1206
             ++F MTD   M FFLG+EV Q   GIF+ Q+KY  ++ ++F M   N + +P+     L
Sbjct: 1032 KSQFAMTDLGKMRFFLGVEVKQLNCGIFIHQQKYANEVLERFNMSQCNKVCSPMVPGNKL 1091

Query: 1205 NKVGKGELVNAAEYRSLVGSLRYLTHTRPDIVFGVGLISQFMETPSEDHLQAAKRIMRHL 1026
             K   G+ V+A  YR ++G L YL  TR D+ F V LI+++ME P+E HL AAKR++R+L
Sbjct: 1092 TKDENGKPVDATSYRQMIGCLMYLLATRSDLTFSVCLIARYMERPTEIHLAAAKRVLRYL 1151

Query: 1025 KGTQTHGLFY 996
            KG+   G+ Y
Sbjct: 1152 KGSVDLGILY 1161



 Score =  182 bits (462), Expect(3) = 0.0
 Identities = 86/152 (56%), Positives = 117/152 (76%)
 Frame = -1

Query: 973  LVGYIDSDWAGDVEDRKSTSDFVFHIGSSVVYWSSKKQQVVALSTTEAEYMAATSCASQV 794
            L G+ DSD+AGD++DRK+TS +VF IGSS + WSSKKQ +V LSTTEAEY++A SCA Q 
Sbjct: 1169 LEGWSDSDYAGDLDDRKNTSGYVFMIGSSPISWSSKKQAIVTLSTTEAEYVSAASCACQA 1228

Query: 793  VWLRRLLNELHQQQYSPTTIYCDNRSAIALTKNPVFHGRSKHIDIKFHYI*DLATEGKIV 614
            +WLRR+L +L Q Q   TTI CDN S+I L+KNPV HGR KHID+++H++ DL  E  I 
Sbjct: 1229 IWLRRILEQLKQPQ-GCTTIQCDNSSSIKLSKNPVMHGRCKHIDVRYHFLRDLVKENVIK 1287

Query: 613  LDYCNTEEKIADIFTKLLNAEVFYKLKEKLGV 518
            L +CNT++++ADI TK L  ++F  L+++LG+
Sbjct: 1288 LIHCNTQDQMADIMTKALKLDLFSNLRDRLGI 1319


>GAU16044.1 hypothetical protein TSUD_339150 [Trifolium subterraneum]
          Length = 1284

 Score =  421 bits (1083), Expect(3) = 0.0
 Identities = 229/552 (41%), Positives = 314/552 (56%), Gaps = 9/552 (1%)
 Frame = -1

Query: 3985 FESLSMNESEVISDYFTRVQTVVNELRSNGEILADTRIVEKIMRSLTEPFDYVVVAIEEG 3806
            FE L M + E ++++F R   + N++ + GE L++++I EKI+RS+T  F+YVV +IEE 
Sbjct: 94   FEILCMKDEESVTEFFARTLAIANKMTAQGERLSESQIGEKILRSMTSKFEYVVCSIEES 153

Query: 3805 KYMSSLTIDGLKGSLSAYEFRMKHRKPCSLEHALRSKVVITXXXXXXXXXXSTPAQG--- 3635
            K +++++ID L+ SL  +E RMK  K  + E AL+    +            T A+G   
Sbjct: 154  KDVTTMSIDELQSSLLVHEGRMKMHKAKADEQALKMSN-LGRGYSGTRGGGRTSARGRGR 212

Query: 3634 GFPRKTDKSIIQCFRCKVFGHYRSEC-----KAKFAKKHVEHSNYVELEEEEHLFFTCSD 3470
            G      K +++C++C   GHY++EC      A FA +  EH   + + + +H+  T   
Sbjct: 213  GRSNAISKELVECYKCHKLGHYKNECPTWEENANFAAEFNEHEELLMMAQSQHITNTSDQ 272

Query: 3469 DDDEEHLNSWYLDTGCTNHMCGNKELFLNLDESITGVVNFGNKSQVPIMG*GKVLLKLPS 3290
                     W+LD+GC+NHM G KE   + D++    V  G+ S +P+MG G V + L  
Sbjct: 273  --------VWFLDSGCSNHMIGTKEWLFDFDDTFRETVKLGDNSTMPVMGKGNVKICLQG 324

Query: 3289 -YHFIYEVFYVPSLK*NLLSVGQLSVTGFRFIIERGVCTIETKDDEVVGTIKMTDKRLFR 3113
                I  V+Y+P+L+ NLLS+GQL       +  +  C I  +D  ++ +  MT  R++ 
Sbjct: 325  RISVITNVYYLPNLRNNLLSIGQLQEKNLTVVFSKNDCKIYHEDKGLIVSTPMTVNRMYV 384

Query: 3112 LSLEPSAQCSLSAIATDDNWLWHFRYGHXXXXXXXXXXXXNMVTGLPLLDGVDRLCQSCV 2933
            L         L      +  LWH RYGH             MV GLPLL     LC  C+
Sbjct: 385  LLAPVMLPNCLKITHESEEHLWHSRYGHLSFKGLHALAKREMVKGLPLLQETQELCSDCI 444

Query: 2932 RGKQHRDSFPVGKSQRAYQQLQLVHSDICGPMQTVSHGGNRDFLTFIDDYN*KIWVYLLK 2753
              K  RDS P   S RA   LQLVHSDICGP+   S+GG R F+TF DDY+ K W Y LK
Sbjct: 445  TSKHQRDSIPKSSSWRATTNLQLVHSDICGPLNPPSNGGCRYFITFTDDYSRKTWTYPLK 504

Query: 2752 QKSEAFGKFKEFKAYVENQSGSRLKVLRTDRGGEYTLMFLTFFYKDHGIKHQLTASYTPQ 2573
            +KS AF  FK FKA VE +S + +K LRTDRGGE+T      F  +HGIK QLTA+YTPQ
Sbjct: 505  EKSSAFEVFKRFKALVEKESSNFIKCLRTDRGGEFTSNSFNEFCSEHGIKRQLTAAYTPQ 564

Query: 2572 QNGVSERKNRTIVEMARSMLTNKNLSKTFWAEAVCCVVYILNRCPTKSVLNMTPEEAWSG 2393
            QNGVSERKNRT++ M RSML+ + + K FW EAV    ++LNR PT SV NMTPEEAWSG
Sbjct: 565  QNGVSERKNRTLMNMVRSMLSGRCVPKRFWPEAVVWATHVLNRSPTLSVKNMTPEEAWSG 624

Query: 2392 YKPDVTSLCIFG 2357
             KP V    +FG
Sbjct: 625  TKPSVAYFRVFG 636



 Score =  375 bits (964), Expect(3) = 0.0
 Identities = 210/494 (42%), Positives = 294/494 (59%), Gaps = 48/494 (9%)
 Frame = -3

Query: 2357 LDDKGEKCIFLGYSERTKGYKLFNPVTSVVISSRDVVLSEDESWD---STKTEKTKSILD 2187
            LD K  KC+ LG SE +K YK+++P+   +I SRDVV +E + W+     K      +LD
Sbjct: 651  LDPKSIKCVHLGVSEESKAYKVYDPIQKKIIISRDVVFNETQGWEWGEKNKEHDIPPVLD 710

Query: 2186 IDDDPLSANNDDPDVLPSP--------ETNSVSSISPRRN---------------PTRTR 2076
            ID    +++ D+P++L             NS     P  +               P R+R
Sbjct: 711  ID----ASSTDEPEILIDETEGQADIENENSAHEEPPHHSETEPSEYEEDLEDTLPPRSR 766

Query: 2075 IQHTRLQDYIVAANNVVLEEDVVNF---ALFAGC-DPLTFDEASRDDGWIQAMDAEIQAI 1908
                 ++DY+     +   E   N    A+F    DP  +++A +   W  AMD EI++I
Sbjct: 767  RPPGWVRDYVTNIEELDEAEQAANLNNLAVFCDNEDPTCYEDAVKLVVWRHAMDQEIESI 826

Query: 1907 EKNNTWKLTSLPKGKKSIGVKWVYKSKYNKDNQVDKLKARLVVKGYKQKLGVDYDEVFAP 1728
            E+N TW+L  LPKG K IGVKWVYK+KYN++ +VDK KARLV KGY Q+ G+D++EVFAP
Sbjct: 827  ERNKTWELVDLPKGAKRIGVKWVYKTKYNENGEVDKHKARLVAKGYSQQHGIDFNEVFAP 886

Query: 1727 VARMETIRMVIAMAAQMKWSIFQMDVKSAFLNGVLKEEVYVDQPTGYVKKGHEDKVLKLN 1548
            VAR +TIR ++A+AA   W ++Q+DVKSAFL+G L E VYVDQP GY K     KV KL 
Sbjct: 887  VARWDTIRAILAIAASKGWFVYQLDVKSAFLHGDLVENVYVDQPPGYSK--DIGKVYKLR 944

Query: 1547 KVLYGLKQAPQAWYTRIDSYF------------------Q*QGNILVVCLYVDDVMFTGN 1422
            K LYGLKQAP+AWY++I+SYF                  + + +IL+V LYVDD++FTG+
Sbjct: 945  KALYGLKQAPRAWYSKIESYFLQEKFEKCPHEHTLFVKKEGKEDILIVSLYVDDLIFTGS 1004

Query: 1421 NSNMLDEFNKEMTNRFEMTDTRFMSFFLGLEVMQTTEGIFLSQKKYVGDIFKKFKMKFYN 1242
            N  M + F   M ++F MTD   M FFLG+EV Q   GIF+ Q+KY  ++  +F M+  N
Sbjct: 1005 NKKMFETFKNSMKSKFSMTDLGKMRFFLGVEVKQLDCGIFIYQQKYAKELLMRFHMEQCN 1064

Query: 1241 PIKTPVETRLHLNKVGKGELVNAAEYRSLVGSLRYLTHTRPDIVFGVGLISQFMETPSED 1062
             + +P+     L K   G+ V+   YR ++G L YL  TRPD+ + V LI+++ME P+E 
Sbjct: 1065 TVCSPIVPGNKLTKDEGGKTVDVTNYRQVIGCLMYLLATRPDLTYSVCLIARYMERPTEA 1124

Query: 1061 HLQAAKRIMRHLKG 1020
            HL AAKR+MR+LKG
Sbjct: 1125 HLAAAKRVMRYLKG 1138



 Score =  182 bits (462), Expect(3) = 0.0
 Identities = 88/144 (61%), Positives = 111/144 (77%)
 Frame = -1

Query: 943  GDVEDRKSTSDFVFHIGSSVVYWSSKKQQVVALSTTEAEYMAATSCASQVVWLRRLLNEL 764
            GD++DRKSTS +VF +GSS V WSSKKQ +V LSTTEAE++AA SCA Q +WLRR+L EL
Sbjct: 1138 GDLDDRKSTSGYVFMLGSSTVSWSSKKQAIVTLSTTEAEFVAAASCACQSIWLRRILEEL 1197

Query: 763  HQQQYSPTTIYCDNRSAIALTKNPVFHGRSKHIDIKFHYI*DLATEGKIVLDYCNTEEKI 584
             Q+Q   TTIYCDN S+I L+KNPV HGR KHID+++H++ DL  EG + L YC+T+E+I
Sbjct: 1198 GQEQKC-TTIYCDNSSSIKLSKNPVLHGRCKHIDVRYHFLRDLTKEGVVELSYCSTQEQI 1256

Query: 583  ADIFTKLLNAEVFYKLKEKLGVHN 512
            ADI TK L  E F  L+ KLG+ N
Sbjct: 1257 ADIMTKALKLESFCNLRNKLGLCN 1280


>AAG51247.1 copia-type polyprotein, putative; 28768-32772 [Arabidopsis thaliana]
          Length = 1334

 Score =  400 bits (1027), Expect(3) = 0.0
 Identities = 230/559 (41%), Positives = 321/559 (57%), Gaps = 16/559 (2%)
 Frame = -1

Query: 3985 FESLSMNESEVISDYFTRVQTVVNELRSNGEILADTRIVEKIMRSLTEPFDYVVVAIEEG 3806
            FE L M   E I+ YF+RV  + N++R+ GE + D+++VEKI+R+L E F YVV AIEE 
Sbjct: 118  FEVLEMKIGETITGYFSRVMEITNDMRNLGEDMPDSKVVEKILRTLVEKFTYVVCAIEES 177

Query: 3805 KYMSSLTIDGLKGSLSAYEFRMKHRKPCSLEHALRSKVVITXXXXXXXXXXSTPAQG--G 3632
              +  LT+DGL+ SL  +E  +        E  L+++               +  +G  G
Sbjct: 178  NNIKELTVDGLQSSLMVHEQNLSRHDV--EERVLKAETQWRPDGGRGRGGSPSRGRGRGG 235

Query: 3631 FPRK----TDKSIIQCFRCKVFGHYRSECKAKFAKKHVEHSNYVELEEEEHLFFTCSDDD 3464
            +  +     ++  ++CF+C   GHY++EC +       + +NYVE+EE+  L        
Sbjct: 236  YQGRGRGYVNRDTVECFKCHKMGHYKAECPS-----WEKEANYVEMEEDLLLMAHVEQIG 290

Query: 3463 DEEHLNSWYLDTGCTNHMCGNKELFLNLDESITGVVNFGNKSQVPIMG*GKVLLKLPS-Y 3287
            DEE    W+LD+GC+NHMCG +E FL LD      V  G+  ++ + G GK+ L++    
Sbjct: 291  DEEK-QIWFLDSGCSNHMCGTREWFLELDSGFKQNVRLGDDRRMAVEGKGKLRLEVDGRI 349

Query: 3286 HFIYEVFYVPSLK*NLLSVGQLSVTGFRFIIERGVCTIETKDDE-VVGTIKMTDKRLF-- 3116
              I +V++VP LK NL SVGQL   G RFIIE  VC +  K ++ +V    MT  R+F  
Sbjct: 350  QVISDVYFVPGLKNNLFSVGQLQQKGLRFIIEGDVCEVWHKTEKRMVMHSTMTKNRMFVV 409

Query: 3115 ----RLSLEPSAQCSLSAIATDDNWLWHFRYGHXXXXXXXXXXXXNMVTGLPLLD--GVD 2954
                + S E      L  I   +N +WH R+GH             MV GLP  D    +
Sbjct: 410  FAAVKKSKETEETRCLQVIGKANN-MWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEE 468

Query: 2953 RLCQSCVRGKQHRDSFPVGKSQRAYQQLQLVHSDICGPMQTVSHGGNRDFLTFIDDYN*K 2774
             +C  C++GKQ R+S P   + ++ Q LQLVH+DICGP+   S  G R  L FIDD++ K
Sbjct: 469  AVCDICLKGKQIRESIPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDFSRK 528

Query: 2773 IWVYLLKQKSEAFGKFKEFKAYVENQSGSRLKVLRTDRGGEYTLMFLTFFYKDHGIKHQL 2594
             W YLL +KSE F  FKEFKA VE +SG +L  LR+DRGGEY       + K+ GIK QL
Sbjct: 529  CWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQL 588

Query: 2593 TASYTPQQNGVSERKNRTIVEMARSMLTNKNLSKTFWAEAVCCVVYILNRCPTKSVLNMT 2414
            TA+YTPQQNGV+ERKNR+++ M R ML   ++ + FW EAV   VYILNR P+K++ ++T
Sbjct: 589  TAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDIT 648

Query: 2413 PEEAWSGYKPDVTSLCIFG 2357
            PEE WS +KP V  L IFG
Sbjct: 649  PEEKWSSWKPSVEHLRIFG 667



 Score =  399 bits (1025), Expect(3) = 0.0
 Identities = 207/490 (42%), Positives = 311/490 (63%), Gaps = 36/490 (7%)
 Frame = -3

Query: 2357 LDDKGEKCIFLGYSERTKGYKLFNPVTSVVISSRDVVLSEDESWDSTKTEKTKSILDIDD 2178
            LD+K  KC+  G S+ +K Y+L++P T  ++ SRDV   E+  W+       + ++  + 
Sbjct: 682  LDEKSIKCVMFGVSKESKAYRLYDPATGKILISRDVQFDEERGWEWEDKSLEEELVWDNS 741

Query: 2177 DPLSANNDDPDVLPS---------PETNSVSSISPRRNPT------RTRIQHTRLQDYIV 2043
            D   A  + P++  +          E  +V+    +  P       R R Q   ++DY+V
Sbjct: 742  DHEPAGEEGPEINHNGQQDQEETEEEEETVAETVHQNLPAVGTGGVRQRQQPVWMKDYVV 801

Query: 2042 AANNVVL---EEDVVNFALFAGCD-PLTFDEASRDDGWIQAMDAEIQAIEKNNTWKLTSL 1875
                V++   EED V  ALF G D P+ F+EA++ + W +AM+AEI +IE+NNTW+L  L
Sbjct: 802  GNARVLITQDEEDEV-LALFIGPDDPVCFEEAAQLEVWRKAMEAEITSIEENNTWELVEL 860

Query: 1874 PKGKKSIGVKWVYKSKYNKDNQVDKLKARLVVKGYKQKLGVDYDEVFAPVARMETIRMVI 1695
            P+  K IG+KW++K+K+N+  +VDK KARLV KGY Q+ GVD+ EVFAPVA+ +TIR+++
Sbjct: 861  PEEAKVIGLKWIFKTKFNEKGEVDKFKARLVAKGYHQRYGVDFYEVFAPVAKWDTIRLIL 920

Query: 1694 AMAAQMKWSIFQMDVKSAFLNGVLKEEVYVDQPTGYVKKGHEDKVLKLNKVLYGLKQAPQ 1515
             +AA+  WS+FQ+DVKSAFL+G LKE+V+V+QP G+  +    KV KL K LYGLKQAP+
Sbjct: 921  GLAAEKGWSVFQLDVKSAFLHGDLKEDVFVEQPKGFEVEEESSKVYKLKKALYGLKQAPR 980

Query: 1514 AWYTRIDSYFQ*QG-----------------NILVVCLYVDDVMFTGNNSNMLDEFNKEM 1386
            AWY+RI+ +F  +G                 + LVV +YVDD+++TG++  M++ F   M
Sbjct: 981  AWYSRIEEFFGKEGFEKCYCEHTLFVKKERSDFLVVSVYVDDLIYTGSSMEMIEGFKNSM 1040

Query: 1385 TNRFEMTDTRFMSFFLGLEVMQTTEGIFLSQKKYVGDIFKKFKMKFYNPIKTPVETRLHL 1206
               F MTD   M +FLG+EV+Q   GIF++Q+KY  +I KK+ M+  N +K P+     L
Sbjct: 1041 MEEFAMTDLGKMKYFLGVEVIQDERGIFINQRKYAAEIIKKYGMEGCNSVKNPIVPGQKL 1100

Query: 1205 NKVGKGELVNAAEYRSLVGSLRYLTHTRPDIVFGVGLISQFMETPSEDHLQAAKRIMRHL 1026
             K G G+ V+  E++ L+GSLRYLT TRPD++F V L+S++ME+P+E HL A KRI+R++
Sbjct: 1101 TKAGAGDAVDPTEFKQLIGSLRYLTTTRPDLIFSVNLVSRYMESPNEQHLLAVKRILRYV 1160

Query: 1025 KGTQTHGLFY 996
            +GT   G+ Y
Sbjct: 1161 QGTLDLGIQY 1170



 Score =  179 bits (455), Expect(3) = 0.0
 Identities = 82/159 (51%), Positives = 116/159 (72%)
 Frame = -1

Query: 979  SNLVGYIDSDWAGDVEDRKSTSDFVFHIGSSVVYWSSKKQQVVALSTTEAEYMAATSCAS 800
            + LVG++DSD+AGDV+DRKSTS +VF +G   + W+SKKQ +V LSTTEAE+++A+  A 
Sbjct: 1176 TELVGFVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEFVSASYGAC 1235

Query: 799  QVVWLRRLLNELHQQQYSPTTIYCDNRSAIALTKNPVFHGRSKHIDIKFHYI*DLATEGK 620
            Q VWLR +L E+  +Q   T ++CDN S I L+KNPV HGRSKHI +++H++ +L  EG 
Sbjct: 1236 QAVWLRNVLEEIGCRQEGGTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRELVKEGT 1295

Query: 619  IVLDYCNTEEKIADIFTKLLNAEVFYKLKEKLGVHNSNE 503
            I LDYC T +++ADI TK +  EVF +L+ ++GV    E
Sbjct: 1296 IRLDYCTTTDQVADIMTKAVKREVFEELRGRMGVRRREE 1334