BLASTX nr result

ID: Lithospermum23_contig00027100 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00027100
         (765 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_012448736.1 PREDICTED: uncharacterized protein LOC105771903 [...    55   7e-06

>XP_012448736.1 PREDICTED: uncharacterized protein LOC105771903 [Gossypium
           raimondii]
          Length = 182

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 6/132 (4%)
 Frame = -3

Query: 709 YDEHLMHSVEVKCLILSTMEHPLKVKNQDVRS*FDLCSYATLLRENFVKRVKRKMLHTLT 530
           Y ++L   ++V CL+L+TM H L+ +++D+ + +D+  +   L E   ++ + +    L 
Sbjct: 46  YKKYLDDMLDVGCLMLATMTHELRKQHKDMVA-YDMIQHLMELYEGQARQERYETSKALF 104

Query: 529 NVKAGE-----NHVLEIMRLIELLRYSGIPIYPELRLNVITITYP-SMYQFHIGYNG*ET 368
             K  E     NH+L+++  IE L   G P+  EL +NVI  + P S+  F + +N  E 
Sbjct: 105 QCKTMEGTPVRNHILKMIGYIESLEKLGFPLGVELAINVILQSLPYSLSLFFLNFNMKEI 164

Query: 367 KKALVLLREMRR 332
            K L  L  M R
Sbjct: 165 NKTLPQLLSMLR 176


Top