BLASTX nr result
ID: Lithospermum23_contig00026937
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00026937
(390 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP55171.1 Retrovirus-related Pol polyprotein from transposon TN... 120 6e-33
XP_019085908.1 PREDICTED: leucine-rich repeat extensin-like prot... 111 9e-28
JAU04955.1 Copia protein, partial [Noccaea caerulescens] 105 9e-24
KZV24566.1 hypothetical protein F511_39264 [Dorcoceras hygrometr... 95 1e-23
ABF95666.1 retrotransposon protein, putative, Ty1-copia subclass... 103 2e-23
JAU27329.1 Retrovirus-related Pol polyprotein from transposon TN... 96 1e-22
XP_010496488.1 PREDICTED: uncharacterized protein LOC104773550 [... 100 3e-22
AAU10819.1 putative polyprotein [Oryza sativa Japonica Group] AA... 100 4e-22
JAU62511.1 Retrovirus-related Pol polyprotein from transposon TN... 100 5e-22
XP_008671960.1 PREDICTED: uncharacterized protein LOC103649473 [... 100 6e-22
XP_020153198.1 uncharacterized protein LOC109738517 [Aegilops ta... 98 2e-21
XP_013615106.1 PREDICTED: uncharacterized protein LOC106321369 [... 98 3e-21
ABA97658.1 retrotransposon protein, putative, Ty1-copia subclass... 98 3e-21
XP_013594524.1 PREDICTED: uncharacterized protein LOC106302599 [... 97 5e-21
XP_013673583.1 PREDICTED: uncharacterized protein LOC106377916 [... 97 5e-21
XP_008666385.1 PREDICTED: uncharacterized protein LOC103645032 [... 97 7e-21
KYP66503.1 Retrovirus-related Pol polyprotein from transposon TN... 97 7e-21
AOG75315.1 integrase [Mirabilis jalapa] 96 8e-21
KYP70331.1 Retrovirus-related Pol polyprotein from transposon TN... 96 1e-20
KYP70322.1 Retrovirus-related Pol polyprotein from transposon TN... 96 1e-20
>KYP55171.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 97
Score = 120 bits (300), Expect = 6e-33
Identities = 56/84 (66%), Positives = 65/84 (77%)
Frame = +3
Query: 78 LYYQTPFYYLYHKT*TPNHLCVFGCLCYPLFPSSTINKLQPCSTPCVFLGYPSNHRGYKC 257
L YQ+PF LY K + +HL VFGCLCYPL PS+TINKLQP S+ CVFLGYP NH GYKC
Sbjct: 14 LNYQSPFRILYQKDPSYSHLRVFGCLCYPLIPSTTINKLQPRSSSCVFLGYPPNHCGYKC 73
Query: 258 YDTLNRKIIISRHVIFNEISFPFA 329
+D ++KIIIS HVIF+E F FA
Sbjct: 74 FDLSSQKIIISHHVIFDETQFSFA 97
>XP_019085908.1 PREDICTED: leucine-rich repeat extensin-like protein 5 [Camelina
sativa]
Length = 239
Score = 111 bits (277), Expect = 9e-28
Identities = 53/102 (51%), Positives = 72/102 (70%), Gaps = 1/102 (0%)
Frame = +3
Query: 75 TLYYQTPFYYLYHKT*TPNHLCVFGCLCYPLFPSSTINKLQPCSTPCVFLGYPSNHRGYK 254
T+ Q PF L++K + +HL VFGCLCYP +T NKL P ST CVFLGYP+NHRGY+
Sbjct: 13 TIANQIPFTRLFNKPSSYDHLRVFGCLCYPNLLPTTSNKLSPRSTRCVFLGYPTNHRGYR 72
Query: 255 CYDTLNRKIIISRHVIFNEISFPFAS-KSPCSIVTPNSTHSP 377
C D +IIISRHV+F+E +FPF+S +S + +P +++ P
Sbjct: 73 CLDLATHRIIISRHVVFDETTFPFSSVRSASPLPSPPTSYLP 114
>JAU04955.1 Copia protein, partial [Noccaea caerulescens]
Length = 817
Score = 105 bits (261), Expect = 9e-24
Identities = 50/94 (53%), Positives = 62/94 (65%)
Frame = +3
Query: 93 PFYYLYHKT*TPNHLCVFGCLCYPLFPSSTINKLQPCSTPCVFLGYPSNHRGYKCYDTLN 272
PF L++K + HL VFGCLCYP + NKL P S C+FLGYP+NH+GY+C D
Sbjct: 74 PFTRLFNKPVSYEHLRVFGCLCYPNLLPTAPNKLSPRSARCIFLGYPTNHKGYRCLDLST 133
Query: 273 RKIIISRHVIFNEISFPFASKSPCSIVTPNSTHS 374
R+IIISRHV+F+E SFPF S S P + HS
Sbjct: 134 RRIIISRHVVFDENSFPFTSTLSPSSSPPAAPHS 167
>KZV24566.1 hypothetical protein F511_39264 [Dorcoceras hygrometricum]
Length = 1226
Score = 95.1 bits (235), Expect(2) = 1e-23
Identities = 46/83 (55%), Positives = 56/83 (67%)
Frame = +3
Query: 84 YQTPFYYLYHKT*TPNHLCVFGCLCYPLFPSSTINKLQPCSTPCVFLGYPSNHRGYKCYD 263
Y +P LY + + L VFGCLC+PL PS+TINKLQ S+PC +LG NHRG KCYD
Sbjct: 635 YLSPTQILYQSDPSYSDLRVFGCLCFPLIPSTTINKLQERSSPCAYLGPAPNHRGSKCYD 694
Query: 264 TLNRKIIISRHVIFNEISFPFAS 332
+ KIII RHV F E FPF++
Sbjct: 695 ISSGKIIICRHVGFIETEFPFST 717
Score = 42.0 bits (97), Expect(2) = 1e-23
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +1
Query: 1 ANVPSNFWHHTLQTTTYLLNILPHKLYIIKHPSTI 105
A++P FWHH L TYLLNILP K+ P+ I
Sbjct: 607 ASMPPTFWHHALSMATYLLNILPSKVIDYLSPTQI 641
>ABF95666.1 retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 976
Score = 103 bits (258), Expect = 2e-23
Identities = 49/104 (47%), Positives = 69/104 (66%)
Frame = +3
Query: 24 APYTSNHHLSPQYSTP*TLYYQTPFYYLYHKT*TPNHLCVFGCLCYPLFPSSTINKLQPC 203
A YT+ H ++ + TL + TPF+ LY + +HL VFGC CYP ++ NKL P
Sbjct: 375 ALYTATHLINRHPTK--TLKHHTPFFALYGTHPSYDHLRVFGCKCYPNLSATAANKLSPR 432
Query: 204 STPCVFLGYPSNHRGYKCYDTLNRKIIISRHVIFNEISFPFASK 335
ST CVF YP++H+GY+C+D + ++ ISRHV+F+E SFPFA K
Sbjct: 433 STLCVFRSYPTDHKGYRCFDPIYNRVYISRHVVFDEHSFPFAEK 476
>JAU27329.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 147
Score = 95.5 bits (236), Expect = 1e-22
Identities = 43/89 (48%), Positives = 59/89 (66%)
Frame = +3
Query: 93 PFYYLYHKT*TPNHLCVFGCLCYPLFPSSTINKLQPCSTPCVFLGYPSNHRGYKCYDTLN 272
P+ L+ K HL FGCLCYP +T++KL P STPCV LGYP++HRGY+C +
Sbjct: 14 PYTKLFQKDARYQHLRTFGCLCYPNLLPTTLHKLAPRSTPCVLLGYPTDHRGYRCLELHT 73
Query: 273 RKIIISRHVIFNEISFPFASKSPCSIVTP 359
++II+SRHV F+E FP+ +K + TP
Sbjct: 74 QRIILSRHVTFDESVFPYRAKHITTETTP 102
>XP_010496488.1 PREDICTED: uncharacterized protein LOC104773550 [Camelina sativa]
Length = 747
Score = 100 bits (250), Expect = 3e-22
Identities = 48/90 (53%), Positives = 61/90 (67%)
Frame = +3
Query: 90 TPFYYLYHKT*TPNHLCVFGCLCYPLFPSSTINKLQPCSTPCVFLGYPSNHRGYKCYDTL 269
TPF L++K T +HL VF CLCYP S+ +KL P S CVFLGYP+NHRGY+C D
Sbjct: 629 TPFSRLFNKPQTYDHLRVFRCLCYPNVLSTAPHKLAPRSVACVFLGYPANHRGYRCLDIA 688
Query: 270 NRKIIISRHVIFNEISFPFASKSPCSIVTP 359
+RKI++SRHV+F E FPF+ P + P
Sbjct: 689 SRKILLSRHVVFVENVFPFSQLPPPNTPKP 718
>AAU10819.1 putative polyprotein [Oryza sativa Japonica Group] AAV24907.1
hypothetical protein [Oryza sativa Japonica Group]
Length = 1679
Score = 100 bits (249), Expect = 4e-22
Identities = 49/94 (52%), Positives = 65/94 (69%)
Frame = +3
Query: 45 HLSPQYSTP*TLYYQTPFYYLYHKT*TPNHLCVFGCLCYPLFPSSTINKLQPCSTPCVFL 224
HL ++ T TL TP + LY + +HL VFGC CYP ++T +KL P ST CVFL
Sbjct: 889 HLINRHPTK-TLDRHTPHFALYGTHPSYSHLRVFGCKCYPNLSATTPHKLAPRSTMCVFL 947
Query: 225 GYPSNHRGYKCYDTLNRKIIISRHVIFNEISFPF 326
GYP H+GY+C+D L+ ++IISRHV+F+E SFPF
Sbjct: 948 GYPLYHKGYRCFDPLSNRVIISRHVVFDEHSFPF 981
>JAU62511.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 737
Score = 100 bits (248), Expect = 5e-22
Identities = 48/99 (48%), Positives = 66/99 (66%)
Frame = +3
Query: 87 QTPFYYLYHKT*TPNHLCVFGCLCYPLFPSSTINKLQPCSTPCVFLGYPSNHRGYKCYDT 266
+ PF L+ K+ T +HL +FGCLCYP ++ +KL P S CVFLGYP+NHRGY+C D
Sbjct: 15 EIPFTRLFAKSVTYDHLRIFGCLCYPNLLPTSAHKLAPRSAKCVFLGYPNNHRGYRCLDL 74
Query: 267 LNRKIIISRHVIFNEISFPFASKSPCSIVTPNSTHSPDS 383
+++II+SRHV+F+E FPF V+ + T SP S
Sbjct: 75 HSKRIILSRHVVFDENMFPFQ-------VSVSDTSSPSS 106
>XP_008671960.1 PREDICTED: uncharacterized protein LOC103649473 [Zea mays]
Length = 1477
Score = 100 bits (248), Expect = 6e-22
Identities = 48/96 (50%), Positives = 61/96 (63%)
Frame = +3
Query: 75 TLYYQTPFYYLYHKT*TPNHLCVFGCLCYPLFPSSTINKLQPCSTPCVFLGYPSNHRGYK 254
TL TP L+ + + +HL VFGC CYP ++ +KL P ST CVFLGY S H+GY+
Sbjct: 843 TLNSSTPHLALFGRPPSYDHLRVFGCKCYPNISATAAHKLAPRSTMCVFLGYSSEHKGYR 902
Query: 255 CYDTLNRKIIISRHVIFNEISFPFASKSPCSIVTPN 362
C D +IIISRHV+F+E SFPFA P S + N
Sbjct: 903 CLDISTNRIIISRHVVFDESSFPFAETPPSSALPTN 938
>XP_020153198.1 uncharacterized protein LOC109738517 [Aegilops tauschii subsp.
tauschii]
Length = 575
Score = 98.2 bits (243), Expect = 2e-21
Identities = 44/85 (51%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
Frame = +3
Query: 129 NHLCVFGCLCYPLFPSSTINKLQPCSTPCVFLGYPSNHRGYKCYDTLNRKIIISRHVIFN 308
+ L VFGCLCYP P++T +KL+P S CVFLGYP +HRG++C+D +R+++ SRHV+F+
Sbjct: 307 SQLRVFGCLCYPNVPATTRHKLEPRSIACVFLGYPPDHRGFRCFDLTSRRVLTSRHVLFH 366
Query: 309 EISFPFASKSPCSI--VTPNSTHSP 377
E FPFAS SP V P++ P
Sbjct: 367 EHVFPFASSSPSPTPPVVPSTLQIP 391
>XP_013615106.1 PREDICTED: uncharacterized protein LOC106321369 [Brassica oleracea
var. oleracea]
Length = 733
Score = 98.2 bits (243), Expect = 3e-21
Identities = 45/82 (54%), Positives = 56/82 (68%)
Frame = +3
Query: 87 QTPFYYLYHKT*TPNHLCVFGCLCYPLFPSSTINKLQPCSTPCVFLGYPSNHRGYKCYDT 266
Q P L+ + T +HL VFGCLC+P S +NKL P STPC+F+GYPS HRGY+C D
Sbjct: 512 QIPHTVLFQQNPTYHHLLVFGCLCFPNLNYSHLNKLAPRSTPCLFIGYPSQHRGYRCLDL 571
Query: 267 LNRKIIISRHVIFNEISFPFAS 332
+KIIISRHV F+E P A+
Sbjct: 572 KTKKIIISRHVYFDEEKLPAAN 593
>ABA97658.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1597
Score = 98.2 bits (243), Expect = 3e-21
Identities = 49/102 (48%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Frame = +3
Query: 45 HLSPQYSTP*TLYYQTPFYYLYHKT*TPNHLCVFGCLCYPLFPSSTINKLQPCSTPCVFL 224
HL ++ T L + TPF+ LY + HL VFGC CYP ++ +KL P ST C+FL
Sbjct: 807 HLINRHPTK-MLQHHTPFFALYGVHPSYAHLRVFGCKCYPNLSATAPHKLSPRSTMCIFL 865
Query: 225 GYPSNHRGYKCYDTLNRKIIISRHVIFNEISFPFAS-KSPCS 347
GYP +H+GY+C D ++IISRHV+F+E SFP+A+ SP S
Sbjct: 866 GYPLHHKGYRCLDPSTNRVIISRHVVFDEHSFPYANISSPSS 907
>XP_013594524.1 PREDICTED: uncharacterized protein LOC106302599 [Brassica oleracea
var. oleracea]
Length = 903
Score = 97.4 bits (241), Expect = 5e-21
Identities = 44/87 (50%), Positives = 57/87 (65%)
Frame = +3
Query: 87 QTPFYYLYHKT*TPNHLCVFGCLCYPLFPSSTINKLQPCSTPCVFLGYPSNHRGYKCYDT 266
Q PF L+HK +HL VFG LC+P S +NKL P STPC+FLGYPS H Y+C D
Sbjct: 515 QIPFIVLFHKQPRYDHLKVFGSLCFPNLNHSNLNKLAPRSTPCLFLGYPSQHSAYRCLDL 574
Query: 267 LNRKIIISRHVIFNEISFPFASKSPCS 347
K+I+SRHV+F+E FP + ++ S
Sbjct: 575 KTNKLILSRHVVFDESVFPASQRTTTS 601
>XP_013673583.1 PREDICTED: uncharacterized protein LOC106377916 [Brassica napus]
Length = 921
Score = 97.4 bits (241), Expect = 5e-21
Identities = 45/87 (51%), Positives = 57/87 (65%)
Frame = +3
Query: 87 QTPFYYLYHKT*TPNHLCVFGCLCYPLFPSSTINKLQPCSTPCVFLGYPSNHRGYKCYDT 266
Q PF L+HK +HL VF LC+P S +NKL P STPC+FLGYPS H GY+C D
Sbjct: 533 QIPFTVLFHKQPRYDHLKVFRSLCFPNLNHSNLNKLAPRSTPCLFLGYPSQHSGYRCLDL 592
Query: 267 LNRKIIISRHVIFNEISFPFASKSPCS 347
K+I+SRHV+F+E FP A ++ S
Sbjct: 593 KTNKLILSRHVVFDESVFPAAQRTKTS 619
>XP_008666385.1 PREDICTED: uncharacterized protein LOC103645032 [Zea mays]
Length = 1155
Score = 97.1 bits (240), Expect = 7e-21
Identities = 46/88 (52%), Positives = 59/88 (67%)
Frame = +3
Query: 75 TLYYQTPFYYLYHKT*TPNHLCVFGCLCYPLFPSSTINKLQPCSTPCVFLGYPSNHRGYK 254
TL + TP L+ NHL VFGC CYP +++ +KL P S CVFLGY +H+GY+
Sbjct: 813 TLRFSTPHQALFGTAPVYNHLRVFGCKCYPNLLATSPHKLAPRSVLCVFLGYSDHHKGYR 872
Query: 255 CYDTLNRKIIISRHVIFNEISFPFASKS 338
C D + KIIISRHV+F+E SFPFA +S
Sbjct: 873 CLDIHSNKIIISRHVVFDETSFPFAEQS 900
>KYP66503.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1356
Score = 97.1 bits (240), Expect = 7e-21
Identities = 48/84 (57%), Positives = 57/84 (67%)
Frame = +3
Query: 78 LYYQTPFYYLYHKT*TPNHLCVFGCLCYPLFPSSTINKLQPCSTPCVFLGYPSNHRGYKC 257
L Y +P LY + + L FGCLC+PLFPS+TINKLQ STPCV+LG NHRG KC
Sbjct: 709 LNYLSPTQILYQGNPSYSDLRTFGCLCFPLFPSTTINKLQERSTPCVYLGPAPNHRGSKC 768
Query: 258 YDTLNRKIIISRHVIFNEISFPFA 329
Y+ + KIII RHV F E FPF+
Sbjct: 769 YEISSGKIIICRHVRFVENEFPFS 792
>AOG75315.1 integrase [Mirabilis jalapa]
Length = 368
Score = 95.5 bits (236), Expect = 8e-21
Identities = 46/91 (50%), Positives = 57/91 (62%)
Frame = +3
Query: 75 TLYYQTPFYYLYHKT*TPNHLCVFGCLCYPLFPSSTINKLQPCSTPCVFLGYPSNHRGYK 254
TL + P L+ T +HL +FGCLCYP +KL+P STPCVFLGYP +GY
Sbjct: 179 TLGKRVPHELLFGSLPTYDHLRIFGCLCYPNLTPMISHKLEPRSTPCVFLGYPPTQKGYC 238
Query: 255 CYDTLNRKIIISRHVIFNEISFPFASKSPCS 347
C+D N+KII SRHV F+E FP+ SP S
Sbjct: 239 CFDLENKKIITSRHVTFDETVFPYPLLSPMS 269
>KYP70331.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 409
Score = 95.5 bits (236), Expect = 1e-20
Identities = 42/62 (67%), Positives = 48/62 (77%)
Frame = +3
Query: 78 LYYQTPFYYLYHKT*TPNHLCVFGCLCYPLFPSSTINKLQPCSTPCVFLGYPSNHRGYKC 257
L YQ+P LY K + +HL VFGCLCYPL PS+TINKLQP ST C+FLGYP NH GYKC
Sbjct: 345 LNYQSPLQILYQKDPSYSHLRVFGCLCYPLIPSTTINKLQPWSTSCIFLGYPLNHCGYKC 404
Query: 258 YD 263
+D
Sbjct: 405 FD 406
>KYP70322.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 409
Score = 95.5 bits (236), Expect = 1e-20
Identities = 42/62 (67%), Positives = 48/62 (77%)
Frame = +3
Query: 78 LYYQTPFYYLYHKT*TPNHLCVFGCLCYPLFPSSTINKLQPCSTPCVFLGYPSNHRGYKC 257
L YQ+P LY K + +HL VFGCLCYPL PS+TINKLQP ST C+FLGYP NH GYKC
Sbjct: 345 LNYQSPLQILYQKDPSYSHLRVFGCLCYPLIPSTTINKLQPWSTSCIFLGYPLNHCGYKC 404
Query: 258 YD 263
+D
Sbjct: 405 FD 406