BLASTX nr result
ID: Lithospermum23_contig00026671
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00026671
(623 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_011086689.1 PREDICTED: RNA polymerase sigma factor sigB isofo... 100 3e-21
XP_011086680.1 PREDICTED: RNA polymerase sigma factor sigB isofo... 100 5e-21
XP_009761599.1 PREDICTED: RNA polymerase sigma factor sigB-like ... 96 2e-19
CDP07629.1 unnamed protein product [Coffea canephora] 93 2e-18
XP_009599122.1 PREDICTED: RNA polymerase sigma factor sigB-like ... 92 3e-18
XP_019178801.1 PREDICTED: RNA polymerase sigma factor sigB [Ipom... 91 8e-18
XP_019224549.1 PREDICTED: RNA polymerase sigma factor sigB-like ... 90 2e-17
KVH89314.1 RNA polymerase sigma-70, partial [Cynara cardunculus ... 88 9e-17
XP_012849681.1 PREDICTED: RNA polymerase sigma factor sigB [Eryt... 80 4e-14
KJB46068.1 hypothetical protein B456_007G347300 [Gossypium raimo... 78 2e-13
KJB46069.1 hypothetical protein B456_007G347300 [Gossypium raimo... 78 3e-13
KJB46073.1 hypothetical protein B456_007G347300 [Gossypium raimo... 78 3e-13
XP_012434812.1 PREDICTED: RNA polymerase sigma factor sigB [Goss... 78 3e-13
XP_017627350.1 PREDICTED: RNA polymerase sigma factor sigB [Goss... 78 3e-13
XP_016545923.1 PREDICTED: RNA polymerase sigma factor sigB [Caps... 77 6e-13
XP_016755384.1 PREDICTED: RNA polymerase sigma factor sigB-like ... 76 2e-12
XP_004229543.1 PREDICTED: RNA polymerase sigma factor sigB [Sola... 76 2e-12
XP_006359117.1 PREDICTED: RNA polymerase sigma factor sigB [Sola... 75 3e-12
XP_010661180.1 PREDICTED: RNA polymerase sigma factor sigB [Viti... 74 7e-12
XP_015061066.1 PREDICTED: RNA polymerase sigma factor sigB [Sola... 73 2e-11
>XP_011086689.1 PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Sesamum
indicum]
Length = 457
Score = 100 bits (249), Expect = 3e-21
Identities = 62/146 (42%), Positives = 77/146 (52%), Gaps = 5/146 (3%)
Frame = +2
Query: 134 MSCLLSQFKCLPHTFSANLNSPQPQH---SKCKETIKMRTQCVLXXXXXXXXXXXX-VID 301
MSCLL QFKC P TF+ N S SK +E RTQC+L V+D
Sbjct: 1 MSCLLPQFKCSPDTFAVNFKSQSHTSVYSSKSREATSFRTQCILSTTPPPTLTATTTVLD 60
Query: 302 VDKLQHQSLEANPDPLPGQRTWRLPVSTT-TAALNLEQLRILSLETHPSSESVNRRWIYT 478
+KLQ SLEA P+ +P R+W P S+ TA L+LE L SL+ HP + + N+ W Y
Sbjct: 61 FEKLQLSSLEAIPNQVPADRSWSTPTSSAKTAMLDLEGLP--SLDAHPITTAANKPWTYV 118
Query: 479 GTAVPPIEARHVAPLTKETFRTSDEA 556
G PP E A L ET TS+EA
Sbjct: 119 GAIAPPSEVTLGANLDTETLLTSEEA 144
>XP_011086680.1 PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Sesamum
indicum]
Length = 613
Score = 100 bits (249), Expect = 5e-21
Identities = 62/146 (42%), Positives = 77/146 (52%), Gaps = 5/146 (3%)
Frame = +2
Query: 134 MSCLLSQFKCLPHTFSANLNSPQPQH---SKCKETIKMRTQCVLXXXXXXXXXXXX-VID 301
MSCLL QFKC P TF+ N S SK +E RTQC+L V+D
Sbjct: 1 MSCLLPQFKCSPDTFAVNFKSQSHTSVYSSKSREATSFRTQCILSTTPPPTLTATTTVLD 60
Query: 302 VDKLQHQSLEANPDPLPGQRTWRLPVSTT-TAALNLEQLRILSLETHPSSESVNRRWIYT 478
+KLQ SLEA P+ +P R+W P S+ TA L+LE L SL+ HP + + N+ W Y
Sbjct: 61 FEKLQLSSLEAIPNQVPADRSWSTPTSSAKTAMLDLEGLP--SLDAHPITTAANKPWTYV 118
Query: 479 GTAVPPIEARHVAPLTKETFRTSDEA 556
G PP E A L ET TS+EA
Sbjct: 119 GAIAPPSEVTLGANLDTETLLTSEEA 144
>XP_009761599.1 PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana
sylvestris] XP_016439073.1 PREDICTED: RNA polymerase
sigma factor sigB-like [Nicotiana tabacum]
Length = 629
Score = 95.9 bits (237), Expect = 2e-19
Identities = 58/150 (38%), Positives = 84/150 (56%), Gaps = 5/150 (3%)
Frame = +2
Query: 122 KKNFMSCLLSQFKCLPHTF----SANLNSPQPQHSKCKETIKMRTQCVLXXXXXXXXXXX 289
++N MS LL QFK LP TF N NS Q SK ++ I +RTQC+L
Sbjct: 9 ERNSMSYLLPQFKSLPDTFVLCFKTNQNSTI-QLSKGRDHIHLRTQCILATTSAATSTAT 67
Query: 290 X-VIDVDKLQHQSLEANPDPLPGQRTWRLPVSTTTAALNLEQLRILSLETHPSSESVNRR 466
V+D++KL+ S+E + +R+W+ P + T+A L++ +L++LS E +P S + +R
Sbjct: 68 STVLDIEKLKLPSIEILSSSVAAERSWKPPSTATSAVLDIPRLKLLSFEANPDSVAPDRP 127
Query: 467 WIYTGTAVPPIEARHVAPLTKETFRTSDEA 556
W YTG PP EA + L E TSDEA
Sbjct: 128 WTYTGAVGPPTEANTKSALATENLVTSDEA 157
>CDP07629.1 unnamed protein product [Coffea canephora]
Length = 615
Score = 92.8 bits (229), Expect = 2e-18
Identities = 56/145 (38%), Positives = 79/145 (54%), Gaps = 4/145 (2%)
Frame = +2
Query: 134 MSCLLSQFKCLPHTFSANLNSPQ---PQHSKCKETIKMRTQCVLXXXXXXXXXXXXVIDV 304
MSCLL QF+CLP F S Q PQ SK ++ I +RTQC+L V+D+
Sbjct: 1 MSCLLPQFRCLPDAFGVAFKSHQHSAPQLSKNRDPIHVRTQCILSTTSAPTSAASTVLDI 60
Query: 305 DKLQHQSLEANPDPLPGQRTWRLPVSTTTAA-LNLEQLRILSLETHPSSESVNRRWIYTG 481
+KL+ SLEAN + + +W+ P S AA L +E+L+++SLE H S + NR W Y G
Sbjct: 61 EKLRLLSLEANSNSV-SDGSWKAPKSPAMAAVLVMEKLKLISLEAHSDSVTANRPWTYNG 119
Query: 482 TAVPPIEARHVAPLTKETFRTSDEA 556
I+ A L E+ ++EA
Sbjct: 120 PVDSAIKPNLGATLATESLIANEEA 144
>XP_009599122.1 PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana
tomentosiformis] XP_016487692.1 PREDICTED: RNA
polymerase sigma factor sigB-like [Nicotiana tabacum]
Length = 641
Score = 92.4 bits (228), Expect = 3e-18
Identities = 57/146 (39%), Positives = 81/146 (55%), Gaps = 5/146 (3%)
Frame = +2
Query: 134 MSCLLSQFKCLPHTF----SANLNSPQPQHSKCKETIKMRTQCVLXXXXXXXXXXXX-VI 298
MS LL QFK LP TF N NS Q SK ++ I +RTQC+L V+
Sbjct: 25 MSYLLPQFKSLPDTFVLCFKTNQNSTI-QLSKGRDHIHLRTQCILATTSAATSTATSTVL 83
Query: 299 DVDKLQHQSLEANPDPLPGQRTWRLPVSTTTAALNLEQLRILSLETHPSSESVNRRWIYT 478
D++KL+ S+E + +R+W+ P + T+A L++ +L++LS E +P S + +R W YT
Sbjct: 84 DIEKLKLPSIEILSSSVAAERSWKPPSTATSAVLDIPRLKLLSFEANPDSVAPDRPWTYT 143
Query: 479 GTAVPPIEARHVAPLTKETFRTSDEA 556
G PP EA + L E TSDEA
Sbjct: 144 GPVGPPTEANTKSVLATENLVTSDEA 169
>XP_019178801.1 PREDICTED: RNA polymerase sigma factor sigB [Ipomoea nil]
Length = 612
Score = 91.3 bits (225), Expect = 8e-18
Identities = 54/149 (36%), Positives = 77/149 (51%), Gaps = 8/149 (5%)
Frame = +2
Query: 134 MSCLLSQFKCLPHTFSANLNSPQPQHS------KCKETIKMRTQCVLXXXXXXXXXXXX- 292
MSCLL QFKC P TF+ +P H K + + RTQC+L
Sbjct: 1 MSCLLPQFKCSPDTFAVK-RTPHHHHQSGIHIPKVRHPVYFRTQCILSTASPSASTATAT 59
Query: 293 VIDVDKLQHQSLEANPDPLPGQRTWRLPVST-TTAALNLEQLRILSLETHPSSESVNRRW 469
V++++KL+ SL+ D + G R+W P S TT+ L++E+L + S E + +S + +R W
Sbjct: 60 VLEIEKLELPSLDLCSDSIDGDRSWNPPTSAVTTSMLDMEKLNLPSFEDYSNSVAADRLW 119
Query: 470 IYTGTAVPPIEARHVAPLTKETFRTSDEA 556
YTG PP EA ET TS+EA
Sbjct: 120 SYTGAVGPPTEANSKTAFPAETLLTSEEA 148
>XP_019224549.1 PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana
attenuata] OIT33290.1 rna polymerase sigma factor sigb
[Nicotiana attenuata]
Length = 641
Score = 90.1 bits (222), Expect = 2e-17
Identities = 56/146 (38%), Positives = 81/146 (55%), Gaps = 5/146 (3%)
Frame = +2
Query: 134 MSCLLSQFKCLPHTF----SANLNSPQPQHSKCKETIKMRTQCVLXXXXXXXXXXXX-VI 298
MS LL QFK LP TF N NS Q SK ++ I +RTQC+L V+
Sbjct: 25 MSYLLPQFKSLPDTFVLCFKTNQNSTI-QLSKGRDHIHLRTQCILATTSAATSTATSTVL 83
Query: 299 DVDKLQHQSLEANPDPLPGQRTWRLPVSTTTAALNLEQLRILSLETHPSSESVNRRWIYT 478
+++KL+ S+E + +R+W+ P + T+A L++ +L++LS E +P S + +R W YT
Sbjct: 84 NIEKLKLPSIEILSSSVAVERSWKPPSTATSAVLDIPRLKLLSFEANPDSVAPDRPWTYT 143
Query: 479 GTAVPPIEARHVAPLTKETFRTSDEA 556
G PP EA + L E TSDEA
Sbjct: 144 GAVGPPTEANTKSALATENLVTSDEA 169
>KVH89314.1 RNA polymerase sigma-70, partial [Cynara cardunculus var. scolymus]
Length = 646
Score = 88.2 bits (217), Expect = 9e-17
Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
Frame = +2
Query: 134 MSCLLSQFKCLPHTFSAN---LNSPQPQHSKCKETIKMRTQCVLXXXXXXXXXXXXVIDV 304
MSCLL QFKCLP +FS LN PQ KC+E T+C+L V+++
Sbjct: 74 MSCLLPQFKCLPDSFSIQFKTLNHHSPQLPKCREPTFFPTRCILSTTAPPPSTDSTVLNL 133
Query: 305 DKLQHQSLEANPDPLPGQRTWRLPVSTTTA-ALNLEQLRILSLETHPSSESVNRRWIYTG 481
+KLQ SLE + + +R W S+TTA L++E ++ S+E+H SS +R W+Y G
Sbjct: 134 EKLQLSSLEVHSNSGGAERQWSSSASSTTAGVLDIENFQLPSIESHTSSVVGSRPWVYPG 193
Query: 482 TAVPPIEARHVAPLTKETFRTSDEAEA 562
+ IE + + F TS+ A A
Sbjct: 194 SVGRSIEG-DIGATSPSEFATSEYAAA 219
>XP_012849681.1 PREDICTED: RNA polymerase sigma factor sigB [Erythranthe guttata]
EYU27177.1 hypothetical protein MIMGU_mgv1a003367mg
[Erythranthe guttata]
Length = 589
Score = 80.5 bits (197), Expect = 4e-14
Identities = 55/146 (37%), Positives = 72/146 (49%), Gaps = 5/146 (3%)
Frame = +2
Query: 134 MSCLLSQFKCLPHTFSANLNSP---QPQHSKCKETIKMRTQCVL--XXXXXXXXXXXXVI 298
MSCLL QFKC P TF+ N S SK +E+I RTQCVL ++
Sbjct: 1 MSCLLPQFKCSPDTFAVNFKSQTLFTVHSSKSRESINFRTQCVLSTTSPPPTMAATTTLL 60
Query: 299 DVDKLQHQSLEANPDPLPGQRTWRLPVSTTTAALNLEQLRILSLETHPSSESVNRRWIYT 478
+ +KLQ LE P+ LP R+W P T+ L+L++L L + + N+ Y
Sbjct: 61 EFEKLQLSPLETIPNSLPADRSWTTP-RAKTSLLDLDKLTSLPVAS-------NKTLTYV 112
Query: 479 GTAVPPIEARHVAPLTKETFRTSDEA 556
G+ PP E A L KE TSDEA
Sbjct: 113 GSVGPPSEINLGANLDKEALITSDEA 138
>KJB46068.1 hypothetical protein B456_007G347300 [Gossypium raimondii]
Length = 373
Score = 77.8 bits (190), Expect = 2e-13
Identities = 53/141 (37%), Positives = 60/141 (42%)
Frame = +2
Query: 134 MSCLLSQFKCLPHTFSANLNSPQPQHSKCKETIKMRTQCVLXXXXXXXXXXXXVIDVDKL 313
MSCLL QFKC P TFS + HSK KE+I R+QCVL V+DV+KL
Sbjct: 1 MSCLLPQFKCQPDTFSIQFRAHHSHHSKHKESICFRSQCVLSTTSSTSMATTAVLDVEKL 60
Query: 314 QHQSLEANPDPLPGQRTWRLPVSTTTAALNLEQLRILSLETHPSSESVNRRWIYTGTAVP 493
RLP S E H +S +R W YTG P
Sbjct: 61 ------------------RLP----------------SFEAHSNSVVTDRPWTYTGATGP 86
Query: 494 PIEARHVAPLTKETFRTSDEA 556
P EA A L E TSDEA
Sbjct: 87 PSEASFGATLATENLLTSDEA 107
>KJB46069.1 hypothetical protein B456_007G347300 [Gossypium raimondii]
Length = 498
Score = 77.8 bits (190), Expect = 3e-13
Identities = 53/141 (37%), Positives = 60/141 (42%)
Frame = +2
Query: 134 MSCLLSQFKCLPHTFSANLNSPQPQHSKCKETIKMRTQCVLXXXXXXXXXXXXVIDVDKL 313
MSCLL QFKC P TFS + HSK KE+I R+QCVL V+DV+KL
Sbjct: 1 MSCLLPQFKCQPDTFSIQFRAHHSHHSKHKESICFRSQCVLSTTSSTSMATTAVLDVEKL 60
Query: 314 QHQSLEANPDPLPGQRTWRLPVSTTTAALNLEQLRILSLETHPSSESVNRRWIYTGTAVP 493
RLP S E H +S +R W YTG P
Sbjct: 61 ------------------RLP----------------SFEAHSNSVVTDRPWTYTGATGP 86
Query: 494 PIEARHVAPLTKETFRTSDEA 556
P EA A L E TSDEA
Sbjct: 87 PSEASFGATLATENLLTSDEA 107
>KJB46073.1 hypothetical protein B456_007G347300 [Gossypium raimondii]
Length = 560
Score = 77.8 bits (190), Expect = 3e-13
Identities = 53/141 (37%), Positives = 60/141 (42%)
Frame = +2
Query: 134 MSCLLSQFKCLPHTFSANLNSPQPQHSKCKETIKMRTQCVLXXXXXXXXXXXXVIDVDKL 313
MSCLL QFKC P TFS + HSK KE+I R+QCVL V+DV+KL
Sbjct: 1 MSCLLPQFKCQPDTFSIQFRAHHSHHSKHKESICFRSQCVLSTTSSTSMATTAVLDVEKL 60
Query: 314 QHQSLEANPDPLPGQRTWRLPVSTTTAALNLEQLRILSLETHPSSESVNRRWIYTGTAVP 493
RLP S E H +S +R W YTG P
Sbjct: 61 ------------------RLP----------------SFEAHSNSVVTDRPWTYTGATGP 86
Query: 494 PIEARHVAPLTKETFRTSDEA 556
P EA A L E TSDEA
Sbjct: 87 PSEASFGATLATENLLTSDEA 107
>XP_012434812.1 PREDICTED: RNA polymerase sigma factor sigB [Gossypium raimondii]
KJB46070.1 hypothetical protein B456_007G347300
[Gossypium raimondii]
Length = 578
Score = 77.8 bits (190), Expect = 3e-13
Identities = 53/141 (37%), Positives = 60/141 (42%)
Frame = +2
Query: 134 MSCLLSQFKCLPHTFSANLNSPQPQHSKCKETIKMRTQCVLXXXXXXXXXXXXVIDVDKL 313
MSCLL QFKC P TFS + HSK KE+I R+QCVL V+DV+KL
Sbjct: 1 MSCLLPQFKCQPDTFSIQFRAHHSHHSKHKESICFRSQCVLSTTSSTSMATTAVLDVEKL 60
Query: 314 QHQSLEANPDPLPGQRTWRLPVSTTTAALNLEQLRILSLETHPSSESVNRRWIYTGTAVP 493
RLP S E H +S +R W YTG P
Sbjct: 61 ------------------RLP----------------SFEAHSNSVVTDRPWTYTGATGP 86
Query: 494 PIEARHVAPLTKETFRTSDEA 556
P EA A L E TSDEA
Sbjct: 87 PSEASFGATLATENLLTSDEA 107
>XP_017627350.1 PREDICTED: RNA polymerase sigma factor sigB [Gossypium arboreum]
KHG18437.1 RNA polymerase sigma factor rpoD [Gossypium
arboreum]
Length = 578
Score = 77.8 bits (190), Expect = 3e-13
Identities = 53/141 (37%), Positives = 60/141 (42%)
Frame = +2
Query: 134 MSCLLSQFKCLPHTFSANLNSPQPQHSKCKETIKMRTQCVLXXXXXXXXXXXXVIDVDKL 313
MSCLL QFKC P TFS + HSK KE+I R+QCVL V+DV+KL
Sbjct: 1 MSCLLPQFKCQPDTFSIQFRAHHSHHSKHKESICFRSQCVLSTTSSTSTATTAVLDVEKL 60
Query: 314 QHQSLEANPDPLPGQRTWRLPVSTTTAALNLEQLRILSLETHPSSESVNRRWIYTGTAVP 493
RLP S E H +S +R W YTG P
Sbjct: 61 ------------------RLP----------------SFEAHSNSVVTDRPWTYTGATGP 86
Query: 494 PIEARHVAPLTKETFRTSDEA 556
P EA A L E TSDEA
Sbjct: 87 PSEASFGATLATENLLTSDEA 107
>XP_016545923.1 PREDICTED: RNA polymerase sigma factor sigB [Capsicum annuum]
Length = 613
Score = 77.0 bits (188), Expect = 6e-13
Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 4/145 (2%)
Frame = +2
Query: 134 MSCLLSQFKCLPHTFSANLNSPQ---PQHSKCKETIKMRTQCVLXXXXXXXXXXXXVIDV 304
MS LL QFKCLP TF+ + + Q PQ K ++ ++RTQCVL V+D+
Sbjct: 1 MSFLLPQFKCLPDTFALSFKTHQHSAPQILKGRDPFQLRTQCVLSTTSTVAAT---VLDI 57
Query: 305 DKLQHQSLEANPDPLPGQRTWRLPVST-TTAALNLEQLRILSLETHPSSESVNRRWIYTG 481
+KLQ S+E + + R W+ P T TT +++++L++ S E H S + W Y+
Sbjct: 58 EKLQLPSIEVLSNSVAADRAWKPPSETATTTVVDIQKLKLQSFEAHSDSVAPESPWRYSE 117
Query: 482 TAVPPIEARHVAPLTKETFRTSDEA 556
E A L E T +EA
Sbjct: 118 GVSLSNEVNTKAALATENLLTGEEA 142
>XP_016755384.1 PREDICTED: RNA polymerase sigma factor sigB-like [Gossypium
hirsutum]
Length = 579
Score = 75.9 bits (185), Expect = 2e-12
Identities = 52/141 (36%), Positives = 59/141 (41%)
Frame = +2
Query: 134 MSCLLSQFKCLPHTFSANLNSPQPQHSKCKETIKMRTQCVLXXXXXXXXXXXXVIDVDKL 313
M CLL QFKC P TFS + HSK KE+I R+QCVL V+DV+KL
Sbjct: 1 MPCLLPQFKCQPDTFSIQFRAHHSHHSKHKESICFRSQCVLSTTSSTSMATTAVLDVEKL 60
Query: 314 QHQSLEANPDPLPGQRTWRLPVSTTTAALNLEQLRILSLETHPSSESVNRRWIYTGTAVP 493
RLP S E H +S +R W YTG P
Sbjct: 61 ------------------RLP----------------SFEAHSNSVVTDRPWTYTGATGP 86
Query: 494 PIEARHVAPLTKETFRTSDEA 556
P EA A L E TSDEA
Sbjct: 87 PSEASFGATLATENLLTSDEA 107
>XP_004229543.1 PREDICTED: RNA polymerase sigma factor sigB [Solanum lycopersicum]
Length = 613
Score = 75.9 bits (185), Expect = 2e-12
Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
Frame = +2
Query: 134 MSCLLSQFKCLPHTFSANLNSPQP---QHSKCKETIKMRTQCVLXXXXXXXXXXXX-VID 301
MS LL QF LP F + Q Q SK +++I +RTQC+L V+
Sbjct: 1 MSYLLPQFLSLPDAFVICAKTQQQTTIQLSKSRDSIHLRTQCILSTTSAVTSTATSTVLG 60
Query: 302 VDKLQHQSLEANPDPLPGQRTWRLPVSTTTAALNLEQLRILSLETHPSSESVNRRWIYTG 481
++KLQ S+E + + +R+W+ P + TT +++L++ S E +P S + +R W YTG
Sbjct: 61 IEKLQLPSIEILSNSVAAERSWKSPSAATTTVPGIQKLKLPSFEANPDSVAPDRPWTYTG 120
Query: 482 TAVPPIEA 505
PP EA
Sbjct: 121 AVGPPAEA 128
>XP_006359117.1 PREDICTED: RNA polymerase sigma factor sigB [Solanum tuberosum]
Length = 613
Score = 75.1 bits (183), Expect = 3e-12
Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
Frame = +2
Query: 134 MSCLLSQFKCLPHTFSANLNSPQP---QHSKCKETIKMRTQCVLXXXXXXXXXXXX-VID 301
MS LL QF LP F + Q Q SK ++ I +RTQC+L V+
Sbjct: 1 MSYLLPQFLSLPDAFVICAKTQQQTTIQLSKSRDHIHLRTQCILSTTSAVTSTATSTVLG 60
Query: 302 VDKLQHQSLEANPDPLPGQRTWRLPVSTTTAALNLEQLRILSLETHPSSESVNRRWIYTG 481
++KLQ S+E + + +R+W+ P + TT ++++L++ S E +P S + +R W YTG
Sbjct: 61 IEKLQLPSIEILSNSVAAERSWKSPSAATTTVPDIQKLKLPSFEANPDSVAPDRPWTYTG 120
Query: 482 TAVPPIEA 505
PP EA
Sbjct: 121 AVGPPAEA 128
>XP_010661180.1 PREDICTED: RNA polymerase sigma factor sigB [Vitis vinifera]
CBI40014.3 unnamed protein product, partial [Vitis
vinifera]
Length = 575
Score = 73.9 bits (180), Expect = 7e-12
Identities = 54/144 (37%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
Frame = +2
Query: 134 MSCLLSQFKCLPHTFSANLNSPQPQH--SKCKETIKMRTQCVLXXXXXXXXXXXXVIDVD 307
MSCLL QFKC P TFS + H SK +E I R QC L
Sbjct: 1 MSCLLPQFKCPPDTFSTH----PKLHILSKNREAIYFRVQCALS---------------- 40
Query: 308 KLQHQSLEANPDPLPGQRTWRLPVST-TTAALNLEQLRILSLETHPSSESVNRRWIYTGT 484
T P+ST TTA L++E+LR+ SLE+H +S + +R W Y G
Sbjct: 41 ------------------TTSPPLSTSTTAVLDIEKLRLPSLESHSNSVAAHRPWTYIGV 82
Query: 485 AVPPIEARHVAPLTKETFRTSDEA 556
PP EA A L +ET TS+EA
Sbjct: 83 VGPPTEANFEATLARETLLTSEEA 106
>XP_015061066.1 PREDICTED: RNA polymerase sigma factor sigB [Solanum pennellii]
Length = 613
Score = 72.8 bits (177), Expect = 2e-11
Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Frame = +2
Query: 134 MSCLLSQFKCLPHTFSANLNSPQP---QHSKCKETIKMRTQCVLXXXXXXXXXXXX-VID 301
MS LL QF LP F + Q Q SK ++ I +RTQC+L V+
Sbjct: 1 MSYLLPQFLSLPDAFVICAKTQQQTTIQLSKSRDNIHLRTQCILSTTSAVTSTATSTVLG 60
Query: 302 VDKLQHQSLEANPDPLPGQRTWRLPVSTTTAALNLEQLRILSLETHPSSESVNRRWIYTG 481
++KLQ S+E + + +R+W+ + TT ++++L++ S E +P S + +R W YTG
Sbjct: 61 IEKLQLPSIEILSNSVAAERSWKSTSAATTTVPDIQKLKLPSFEANPDSVAPDRPWTYTG 120
Query: 482 TAVPPIEA 505
PP EA
Sbjct: 121 AVGPPAEA 128