BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00026412
         (215 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_683610.1 Pol-like polyprotein/retrotransposon [Arabidopsis th...    45   4e-06

>NP_683610.1 Pol-like polyprotein/retrotransposon [Arabidopsis thaliana]
           AEE77608.1 Pol-like polyprotein/retrotransposon
           [Arabidopsis thaliana]
          Length = 109

 Score = 45.4 bits (106), Expect(2) = 4e-06
 Identities = 21/49 (42%), Positives = 33/49 (67%)
 Frame = -1

Query: 203 RLSEPLFEKSKEMTIEKWNKLDRKVLEAIRLKLADNVSHNVAKRPQHRG 57
           +L +PL +K + M+ + WN L R+VL+ IRL ++ N++HNVAK     G
Sbjct: 29  KLHQPLGKKVETMSQDDWNILYRQVLDVIRLTISKNIAHNVAKEKSPDG 77



 Score = 32.3 bits (72), Expect(2) = 4e-06
 Identities = 13/25 (52%), Positives = 20/25 (80%)
 Frame = -3

Query: 78  EKTTTQGAMKVLSDLYEKPTTHNKV 4
           ++ +  G MKVLSD+Y+KP+T+N V
Sbjct: 71  KEKSPDGLMKVLSDIYKKPSTNNTV 95