BLASTX nr result
ID: Lithospermum23_contig00026077
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00026077
(237 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
NP_783263.1 RNA polymerase alpha subunit [Atropa belladonna] Q8S... 157 1e-45
YP_009041119.1 RNA polymerase alpha subunit [Rhazya stricta] AHW... 157 1e-45
ALI91014.1 RpoA, partial (chloroplast) [Cassinopsis madagascarie... 156 2e-45
ALI91011.1 RpoA, partial (chloroplast) [Borago officinalis] 156 2e-45
YP_009256066.1 RNA polymerase alpha subunit (chloroplast) [Scopo... 156 4e-45
ALI91058.1 RpoA, partial (chloroplast) [Vahlia capensis] 155 4e-45
YP_008081297.1 RNA polymerase alpha subunit (chloroplast) (chlor... 155 5e-45
AIW05465.1 RNA polymerase alpha subunit (plastid) [Neobracea bah... 155 5e-45
YP_009040352.1 RNA polymerase alpha subunit [Hyoscyamus niger] A... 155 5e-45
YP_009108706.1 RNA polymerase alpha subunit [Nerium oleander] AD... 155 5e-45
ANS80948.1 DNA-directed RNA polymerase alpha subunit (chloroplas... 155 7e-45
NP_054532.1 RNA polymerase alpha subunit [Nicotiana tabacum] YP_... 155 7e-45
YP_004891639.1 rpoA gene product (chloroplast) [Nicotiana undula... 155 7e-45
ADD31214.1 RNA polymerase alpha subunit protein (chloroplast) [E... 155 8e-45
YP_008994321.1 RNA polymerase alpha subunit [Melianthus villosus... 155 1e-44
YP_007889893.1 RNA polymerase alpha subunit [Francoa sonchifolia... 155 1e-44
YP_009316925.1 RNA polymerase alpha subunit (chloroplast) [Lager... 152 1e-44
YP_009254108.1 RpoA (plastid) [Solanum melongena] ANC62794.1 Rpo... 154 1e-44
AMX21716.1 RNA polymerase alpha subunit (chloroplast) [Iochroma ... 154 1e-44
YP_009240630.1 RNA polymerase alpha subunit (chloroplast) [Iochr... 154 1e-44
>NP_783263.1 RNA polymerase alpha subunit [Atropa belladonna] Q8S8V9.1 RecName:
Full=DNA-directed RNA polymerase subunit alpha;
Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit alpha; Short=RNA polymerase subunit alpha
CAC88076.1 RNA polymerase alpha subunit (chloroplast)
[Atropa belladonna]
Length = 337
Score = 157 bits (397), Expect = 1e-45
Identities = 74/77 (96%), Positives = 76/77 (98%)
Frame = -2
Query: 233 LQIEKNRGYLIKTPQNFQDGSYPIDAVFLPVRNANHSIHSYGNGNEKQEILFLEIWTNGS 54
LQIE+NRGYLIKTPQNFQDGSYPIDAVF+PVRNANHSIHSYGNGNEKQEILFLEIWTNGS
Sbjct: 149 LQIERNRGYLIKTPQNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGS 208
Query: 53 FTPKEALHEASRNLIDL 3
TPKEALHEASRNLIDL
Sbjct: 209 LTPKEALHEASRNLIDL 225
>YP_009041119.1 RNA polymerase alpha subunit [Rhazya stricta] AHW52216.1 RNA
polymerase alpha subunit (chloroplast) [Rhazya stricta]
AIB08766.1 RNA polymerase alpha subunit (plastid)
[Rhazya stricta]
Length = 337
Score = 157 bits (397), Expect = 1e-45
Identities = 74/77 (96%), Positives = 76/77 (98%)
Frame = -2
Query: 233 LQIEKNRGYLIKTPQNFQDGSYPIDAVFLPVRNANHSIHSYGNGNEKQEILFLEIWTNGS 54
LQIE+NRGYLIKTPQNFQDGSYPIDAVF+PVRNANHSIHSYGNGNEKQEILFLEIWTNGS
Sbjct: 149 LQIERNRGYLIKTPQNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGS 208
Query: 53 FTPKEALHEASRNLIDL 3
TPKEALHEASRNLIDL
Sbjct: 209 LTPKEALHEASRNLIDL 225
>ALI91014.1 RpoA, partial (chloroplast) [Cassinopsis madagascariensis]
Length = 316
Score = 156 bits (394), Expect = 2e-45
Identities = 74/77 (96%), Positives = 75/77 (97%)
Frame = -2
Query: 233 LQIEKNRGYLIKTPQNFQDGSYPIDAVFLPVRNANHSIHSYGNGNEKQEILFLEIWTNGS 54
LQIE+NRGYLIKTP NFQDGSYPIDAVFLPVRNANHSIHSYGNGNEKQEILFLEIWTNGS
Sbjct: 147 LQIERNRGYLIKTPNNFQDGSYPIDAVFLPVRNANHSIHSYGNGNEKQEILFLEIWTNGS 206
Query: 53 FTPKEALHEASRNLIDL 3
TPKEALHEASRNLIDL
Sbjct: 207 LTPKEALHEASRNLIDL 223
>ALI91011.1 RpoA, partial (chloroplast) [Borago officinalis]
Length = 316
Score = 156 bits (394), Expect = 2e-45
Identities = 74/77 (96%), Positives = 75/77 (97%)
Frame = -2
Query: 233 LQIEKNRGYLIKTPQNFQDGSYPIDAVFLPVRNANHSIHSYGNGNEKQEILFLEIWTNGS 54
LQIEKNRGYLIKTP NFQDGSYPIDAVFLPVRNANHSIHSYGNGN+KQEILFLEIWTNGS
Sbjct: 147 LQIEKNRGYLIKTPHNFQDGSYPIDAVFLPVRNANHSIHSYGNGNDKQEILFLEIWTNGS 206
Query: 53 FTPKEALHEASRNLIDL 3
TPKEALHEASRNLIDL
Sbjct: 207 LTPKEALHEASRNLIDL 223
>YP_009256066.1 RNA polymerase alpha subunit (chloroplast) [Scopolia parviflora]
ANF05244.1 RNA polymerase alpha subunit (chloroplast)
[Scopolia parviflora]
Length = 337
Score = 156 bits (394), Expect = 4e-45
Identities = 73/77 (94%), Positives = 76/77 (98%)
Frame = -2
Query: 233 LQIEKNRGYLIKTPQNFQDGSYPIDAVFLPVRNANHSIHSYGNGNEKQEILFLEIWTNGS 54
LQIE+NRGYLIKTPQNFQDGSYPIDAVF+PVRNANHSIHSYGNGNEKQEILF+EIWTNGS
Sbjct: 149 LQIERNRGYLIKTPQNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFVEIWTNGS 208
Query: 53 FTPKEALHEASRNLIDL 3
TPKEALHEASRNLIDL
Sbjct: 209 LTPKEALHEASRNLIDL 225
>ALI91058.1 RpoA, partial (chloroplast) [Vahlia capensis]
Length = 310
Score = 155 bits (392), Expect = 4e-45
Identities = 73/77 (94%), Positives = 75/77 (97%)
Frame = -2
Query: 233 LQIEKNRGYLIKTPQNFQDGSYPIDAVFLPVRNANHSIHSYGNGNEKQEILFLEIWTNGS 54
LQIE+NRGYLIKTP NFQDGSYPIDAVF+PVRNANHSIHSYGNGNEKQEILFLEIWTNGS
Sbjct: 147 LQIERNRGYLIKTPHNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGS 206
Query: 53 FTPKEALHEASRNLIDL 3
TPKEALHEASRNLIDL
Sbjct: 207 LTPKEALHEASRNLIDL 223
>YP_008081297.1 RNA polymerase alpha subunit (chloroplast) (chloroplast)
[Catharanthus roseus] AGI51176.1 RNA polymerase alpha
subunit (chloroplast) [Catharanthus roseus]
Length = 335
Score = 155 bits (393), Expect = 5e-45
Identities = 73/78 (93%), Positives = 76/78 (97%)
Frame = -2
Query: 236 ELQIEKNRGYLIKTPQNFQDGSYPIDAVFLPVRNANHSIHSYGNGNEKQEILFLEIWTNG 57
ELQIE+NRGYLIKTPQNFQDGSYPIDAVF+PVRNANHSIHSYGNGNEKQEILFLEIWTNG
Sbjct: 148 ELQIERNRGYLIKTPQNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNG 207
Query: 56 SFTPKEALHEASRNLIDL 3
S TP EALHEAS+NLIDL
Sbjct: 208 SLTPNEALHEASQNLIDL 225
>AIW05465.1 RNA polymerase alpha subunit (plastid) [Neobracea bahamensis]
Length = 337
Score = 155 bits (393), Expect = 5e-45
Identities = 73/77 (94%), Positives = 76/77 (98%)
Frame = -2
Query: 233 LQIEKNRGYLIKTPQNFQDGSYPIDAVFLPVRNANHSIHSYGNGNEKQEILFLEIWTNGS 54
LQIE+NRGYLI+TPQNFQDGSYPIDAVF+PVRNANHSIHSYGNGNEKQEILFLEIWTNGS
Sbjct: 149 LQIERNRGYLIQTPQNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGS 208
Query: 53 FTPKEALHEASRNLIDL 3
TPKEALHEASRNLIDL
Sbjct: 209 LTPKEALHEASRNLIDL 225
>YP_009040352.1 RNA polymerase alpha subunit [Hyoscyamus niger] AGU46500.1 RNA
polymerase alpha subunit (plastid) [Hyoscyamus niger]
Length = 337
Score = 155 bits (393), Expect = 5e-45
Identities = 73/78 (93%), Positives = 76/78 (97%)
Frame = -2
Query: 236 ELQIEKNRGYLIKTPQNFQDGSYPIDAVFLPVRNANHSIHSYGNGNEKQEILFLEIWTNG 57
ELQIE+NRGYLIKTPQNFQD SYPIDAVF+PVRNANHSIHSYGNGNEKQEILF+EIWTNG
Sbjct: 148 ELQIERNRGYLIKTPQNFQDASYPIDAVFMPVRNANHSIHSYGNGNEKQEILFVEIWTNG 207
Query: 56 SFTPKEALHEASRNLIDL 3
S TPKEALHEASRNLIDL
Sbjct: 208 SLTPKEALHEASRNLIDL 225
>YP_009108706.1 RNA polymerase alpha subunit [Nerium oleander] ADD31219.1 RNA
polymerase alpha subunit protein (chloroplast) [Nerium
oleander] AIW05550.1 RNA polymerase alpha subunit
(plastid) [Nerium oleander]
Length = 337
Score = 155 bits (393), Expect = 5e-45
Identities = 73/77 (94%), Positives = 76/77 (98%)
Frame = -2
Query: 233 LQIEKNRGYLIKTPQNFQDGSYPIDAVFLPVRNANHSIHSYGNGNEKQEILFLEIWTNGS 54
LQIE+NRGYLI+TPQNFQDGSYPIDAVF+PVRNANHSIHSYGNGNEKQEILFLEIWTNGS
Sbjct: 149 LQIERNRGYLIQTPQNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGS 208
Query: 53 FTPKEALHEASRNLIDL 3
TPKEALHEASRNLIDL
Sbjct: 209 LTPKEALHEASRNLIDL 225
>ANS80948.1 DNA-directed RNA polymerase alpha subunit (chloroplast) [Ilex
pubescens] ANS81043.1 DNA-directed RNA polymerase alpha
subunit (chloroplast) [Ilex polyneura]
Length = 337
Score = 155 bits (392), Expect = 7e-45
Identities = 73/77 (94%), Positives = 75/77 (97%)
Frame = -2
Query: 233 LQIEKNRGYLIKTPQNFQDGSYPIDAVFLPVRNANHSIHSYGNGNEKQEILFLEIWTNGS 54
LQIE+NRGYLIKTP NFQDGSYPIDAVF+PVRNANHSIHSYGNGNEKQEILFLEIWTNGS
Sbjct: 149 LQIERNRGYLIKTPNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGS 208
Query: 53 FTPKEALHEASRNLIDL 3
TPKEALHEASRNLIDL
Sbjct: 209 LTPKEALHEASRNLIDL 225
>NP_054532.1 RNA polymerase alpha subunit [Nicotiana tabacum] YP_358710.1 RNA
polymerase alpha subunit [Nicotiana sylvestris] P06269.1
RecName: Full=DNA-directed RNA polymerase subunit alpha;
Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit alpha; Short=RNA polymerase subunit alpha
Q3C1M3.1 RecName: Full=DNA-directed RNA polymerase
subunit alpha; Short=PEP; AltName: Full=Plastid-encoded
RNA polymerase subunit alpha; Short=RNA polymerase
subunit alpha CAA77376.1 RNA polymerase alpha subunit
(chloroplast) [Nicotiana tabacum] AAG15578.1 RNA
polymerase alpha subunit [synthetic construct]
BAE46686.1 RNA polymerase alpha subunit (chloroplast)
[Nicotiana sylvestris] AMM05580.1 RNA polymerase alpha
subunit (plastid) [Nicotiana tabacum] prf||1211235BK RNA
polymerase alpha
Length = 337
Score = 155 bits (392), Expect = 7e-45
Identities = 73/77 (94%), Positives = 75/77 (97%)
Frame = -2
Query: 233 LQIEKNRGYLIKTPQNFQDGSYPIDAVFLPVRNANHSIHSYGNGNEKQEILFLEIWTNGS 54
LQIE+NRGYLIKTP NFQDGSYPIDAVF+PVRNANHSIHSYGNGNEKQEILFLEIWTNGS
Sbjct: 149 LQIERNRGYLIKTPHNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGS 208
Query: 53 FTPKEALHEASRNLIDL 3
TPKEALHEASRNLIDL
Sbjct: 209 LTPKEALHEASRNLIDL 225
>YP_004891639.1 rpoA gene product (chloroplast) [Nicotiana undulata] AEO95601.1 RNA
polymerase alpha subunit (chloroplast) [Nicotiana
undulata] AEO95711.1 RNA polymerase alpha subunit
[synthetic construct]
Length = 337
Score = 155 bits (392), Expect = 7e-45
Identities = 73/77 (94%), Positives = 75/77 (97%)
Frame = -2
Query: 233 LQIEKNRGYLIKTPQNFQDGSYPIDAVFLPVRNANHSIHSYGNGNEKQEILFLEIWTNGS 54
LQIE+NRGYLIKTP NFQDGSYPIDAVF+PVRNANHSIHSYGNGNEKQEILFLEIWTNGS
Sbjct: 149 LQIERNRGYLIKTPHNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGS 208
Query: 53 FTPKEALHEASRNLIDL 3
TPKEALHEASRNLIDL
Sbjct: 209 LTPKEALHEASRNLIDL 225
>ADD31214.1 RNA polymerase alpha subunit protein (chloroplast) [Ehretia
acuminata]
Length = 339
Score = 155 bits (392), Expect = 8e-45
Identities = 73/77 (94%), Positives = 75/77 (97%)
Frame = -2
Query: 233 LQIEKNRGYLIKTPQNFQDGSYPIDAVFLPVRNANHSIHSYGNGNEKQEILFLEIWTNGS 54
LQIE+NRGYLIKTP NFQDGSYPIDAVF+PVRNANHSIHSYGNGNEKQEILFLEIWTNGS
Sbjct: 151 LQIERNRGYLIKTPHNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGS 210
Query: 53 FTPKEALHEASRNLIDL 3
TPKEALHEASRNLIDL
Sbjct: 211 LTPKEALHEASRNLIDL 227
>YP_008994321.1 RNA polymerase alpha subunit [Melianthus villosus] AGS13039.1 RNA
polymerase alpha subunit (plastid) [Melianthus villosus]
AKF43071.1 RNA polymerase alpha subunit (plastid)
[Melianthus villosus]
Length = 339
Score = 155 bits (391), Expect = 1e-44
Identities = 73/78 (93%), Positives = 75/78 (96%)
Frame = -2
Query: 236 ELQIEKNRGYLIKTPQNFQDGSYPIDAVFLPVRNANHSIHSYGNGNEKQEILFLEIWTNG 57
ELQIE+NRGY IKTP NFQDGSYPIDAVF+PVRNANHSIHSYGNGNEKQEILFLEIWTNG
Sbjct: 148 ELQIERNRGYRIKTPNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNG 207
Query: 56 SFTPKEALHEASRNLIDL 3
S TPKEALHEASRNLIDL
Sbjct: 208 SLTPKEALHEASRNLIDL 225
>YP_007889893.1 RNA polymerase alpha subunit [Francoa sonchifolia] AFJ00503.1 RNA
polymerase alpha subunit (plastid) [Francoa sonchifolia]
AKF43066.1 RNA polymerase alpha subunit (plastid)
[Francoa sonchifolia]
Length = 339
Score = 155 bits (391), Expect = 1e-44
Identities = 73/78 (93%), Positives = 75/78 (96%)
Frame = -2
Query: 236 ELQIEKNRGYLIKTPQNFQDGSYPIDAVFLPVRNANHSIHSYGNGNEKQEILFLEIWTNG 57
ELQIE+NRGY IKTP NFQDGSYPIDAVF+PVRNANHSIHSYGNGNEKQEILFLEIWTNG
Sbjct: 148 ELQIERNRGYRIKTPNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNG 207
Query: 56 SFTPKEALHEASRNLIDL 3
S TPKEALHEASRNLIDL
Sbjct: 208 SLTPKEALHEASRNLIDL 225
>YP_009316925.1 RNA polymerase alpha subunit (chloroplast) [Lagerstroemia
floribunda] AOW43907.1 RNA polymerase alpha subunit
(chloroplast) [Lagerstroemia floribunda]
Length = 259
Score = 152 bits (385), Expect = 1e-44
Identities = 72/77 (93%), Positives = 74/77 (96%)
Frame = -2
Query: 233 LQIEKNRGYLIKTPQNFQDGSYPIDAVFLPVRNANHSIHSYGNGNEKQEILFLEIWTNGS 54
LQIE+NRGY IKTP NFQDGSYPIDAVF+PVRNANHSIHSYGNGNEKQEILFLEIWTNGS
Sbjct: 149 LQIERNRGYHIKTPNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGS 208
Query: 53 FTPKEALHEASRNLIDL 3
TPKEALHEASRNLIDL
Sbjct: 209 LTPKEALHEASRNLIDL 225
>YP_009254108.1 RpoA (plastid) [Solanum melongena] ANC62794.1 RpoA (plastid)
[Solanum melongena]
Length = 337
Score = 154 bits (390), Expect = 1e-44
Identities = 72/77 (93%), Positives = 75/77 (97%)
Frame = -2
Query: 233 LQIEKNRGYLIKTPQNFQDGSYPIDAVFLPVRNANHSIHSYGNGNEKQEILFLEIWTNGS 54
LQIE+NRGYLIKTP NFQDGSYPIDAVF+PVRNANHSIHSYGNGNEKQEILF+EIWTNGS
Sbjct: 149 LQIERNRGYLIKTPHNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFIEIWTNGS 208
Query: 53 FTPKEALHEASRNLIDL 3
TPKEALHEASRNLIDL
Sbjct: 209 LTPKEALHEASRNLIDL 225
>AMX21716.1 RNA polymerase alpha subunit (chloroplast) [Iochroma parvifolium]
Length = 337
Score = 154 bits (390), Expect = 1e-44
Identities = 72/77 (93%), Positives = 75/77 (97%)
Frame = -2
Query: 233 LQIEKNRGYLIKTPQNFQDGSYPIDAVFLPVRNANHSIHSYGNGNEKQEILFLEIWTNGS 54
LQIE+NRGYLIKTP NFQDGSYPIDAVF+PVRNANHSIHSYGNGNEKQEILF+EIWTNGS
Sbjct: 149 LQIERNRGYLIKTPHNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFIEIWTNGS 208
Query: 53 FTPKEALHEASRNLIDL 3
TPKEALHEASRNLIDL
Sbjct: 209 LTPKEALHEASRNLIDL 225
>YP_009240630.1 RNA polymerase alpha subunit (chloroplast) [Iochroma cardenasianum]
AMP19607.1 RNA polymerase alpha subunit (chloroplast)
[Iochroma cardenasianum]
Length = 337
Score = 154 bits (390), Expect = 1e-44
Identities = 72/77 (93%), Positives = 75/77 (97%)
Frame = -2
Query: 233 LQIEKNRGYLIKTPQNFQDGSYPIDAVFLPVRNANHSIHSYGNGNEKQEILFLEIWTNGS 54
LQIE+NRGYLIKTP NFQDGSYPIDAVF+PVRNANHSIHSYGNGNEKQEILF+EIWTNGS
Sbjct: 149 LQIERNRGYLIKTPHNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFIEIWTNGS 208
Query: 53 FTPKEALHEASRNLIDL 3
TPKEALHEASRNLIDL
Sbjct: 209 LTPKEALHEASRNLIDL 225