BLASTX nr result
ID: Lithospermum23_contig00026076
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00026076
(1055 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YP_009041119.1 RNA polymerase alpha subunit [Rhazya stricta] AHW... 289 8e-93
ADD31214.1 RNA polymerase alpha subunit protein (chloroplast) [E... 288 2e-92
YP_009040352.1 RNA polymerase alpha subunit [Hyoscyamus niger] A... 287 6e-92
YP_008081297.1 RNA polymerase alpha subunit (chloroplast) (chlor... 286 8e-92
YP_005296132.1 rpoA gene product (chloroplast) [Pentactina rupic... 286 9e-92
ALI91011.1 RpoA, partial (chloroplast) [Borago officinalis] 285 2e-91
YP_007353946.1 RNA polymerase alpha subunit (chloroplast) [Tecto... 284 1e-90
YP_009309483.1 RNA polymerase alpha subunit (chloroplast) [Paulo... 283 1e-90
YP_008563120.1 RNA polymerase alpha subunit (chloroplast) [Solan... 283 1e-90
ANS80948.1 DNA-directed RNA polymerase alpha subunit (chloroplas... 283 2e-90
ANS80853.1 DNA-directed RNA polymerase alpha subunit (chloroplas... 283 2e-90
YP_009240630.1 RNA polymerase alpha subunit (chloroplast) [Iochr... 283 2e-90
ALI31173.1 RNA polymerase alpha subunit (chloroplast) [Solanum n... 283 2e-90
YP_009171899.1 RpoA (chloroplast) [Solanum nigrum] AKM21976.1 Rp... 283 2e-90
YP_538881.1 RNA polymerase alpha subunit [Solanum bulbocastanum]... 283 2e-90
NP_783263.1 RNA polymerase alpha subunit [Atropa belladonna] Q8S... 283 2e-90
YP_009132076.1 RNA polymerase alpha subunit (chloroplast) [Solan... 283 2e-90
ADD31215.1 RNA polymerase alpha subunit protein (chloroplast) [I... 283 2e-90
YP_009336414.1 RNA polymerase alpha subunit (chloroplast) [Nicot... 283 3e-90
YP_004891639.1 rpoA gene product (chloroplast) [Nicotiana undula... 283 3e-90
>YP_009041119.1 RNA polymerase alpha subunit [Rhazya stricta] AHW52216.1 RNA
polymerase alpha subunit (chloroplast) [Rhazya stricta]
AIB08766.1 RNA polymerase alpha subunit (plastid) [Rhazya
stricta]
Length = 337
Score = 289 bits (740), Expect = 8e-93
Identities = 142/161 (88%), Positives = 153/161 (95%)
Frame = +1
Query: 550 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 729
MVREK+TVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKITVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 730 CITRVKFESEKIPHEYSTVGGIQESLHEILMNLKEIVLRSNIYGTCHASICVKGPGYVTA 909
CITRVKFE K+PHEYST+ GIQES+HEILMNLKEIVLRSN+YGTC+ASICVKGPGYVTA
Sbjct: 61 CITRVKFE--KVPHEYSTIKGIQESVHEILMNLKEIVLRSNLYGTCNASICVKGPGYVTA 118
Query: 910 QDIILPPCVEIVDNTQHIVNLTEPIDLCIELQIEKNGGVIV 1032
QDI+LPP VEIVDNTQHI +LTEPIDLCI LQIE+N G ++
Sbjct: 119 QDIVLPPYVEIVDNTQHIASLTEPIDLCIGLQIERNRGYLI 159
>ADD31214.1 RNA polymerase alpha subunit protein (chloroplast) [Ehretia
acuminata]
Length = 339
Score = 288 bits (737), Expect = 2e-92
Identities = 142/161 (88%), Positives = 151/161 (93%)
Frame = +1
Query: 550 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 729
MVREKV VSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVIVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 730 CITRVKFESEKIPHEYSTVGGIQESLHEILMNLKEIVLRSNIYGTCHASICVKGPGYVTA 909
ITRVK ESEK+PHEYST+ GIQES+HEILMNLKEIVLRSN+YGTC ASICV+GPGYVTA
Sbjct: 61 SITRVKSESEKVPHEYSTISGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTA 120
Query: 910 QDIILPPCVEIVDNTQHIVNLTEPIDLCIELQIEKNGGVIV 1032
QDIILPP VEIVDNTQHI +LTEPIDLCI LQIE+N G ++
Sbjct: 121 QDIILPPYVEIVDNTQHIASLTEPIDLCIGLQIERNRGYLI 161
>YP_009040352.1 RNA polymerase alpha subunit [Hyoscyamus niger] AGU46500.1 RNA
polymerase alpha subunit (plastid) [Hyoscyamus niger]
Length = 337
Score = 287 bits (734), Expect = 6e-92
Identities = 143/161 (88%), Positives = 151/161 (93%)
Frame = +1
Query: 550 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 729
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 730 CITRVKFESEKIPHEYSTVGGIQESLHEILMNLKEIVLRSNIYGTCHASICVKGPGYVTA 909
CITRVKFE K+PHEYST+ GIQES+HEILMNLKEIVLRSN+YGT ASICVKGPGYVTA
Sbjct: 61 CITRVKFE--KVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTSEASICVKGPGYVTA 118
Query: 910 QDIILPPCVEIVDNTQHIVNLTEPIDLCIELQIEKNGGVIV 1032
QDIILPP VEIVDNTQHI +LTEPID CIELQIE+N G ++
Sbjct: 119 QDIILPPYVEIVDNTQHIASLTEPIDFCIELQIERNRGYLI 159
>YP_008081297.1 RNA polymerase alpha subunit (chloroplast) (chloroplast)
[Catharanthus roseus] AGI51176.1 RNA polymerase alpha
subunit (chloroplast) [Catharanthus roseus]
Length = 335
Score = 286 bits (733), Expect = 8e-92
Identities = 140/161 (86%), Positives = 152/161 (94%)
Frame = +1
Query: 550 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 729
MVREK+TVSTRTLQWKCVESRTD+KRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKITVSTRTLQWKCVESRTDNKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 730 CITRVKFESEKIPHEYSTVGGIQESLHEILMNLKEIVLRSNIYGTCHASICVKGPGYVTA 909
CITRVKFE K+PHEYST+ GIQES+HEILMNLKEIVLRSN+YGTC ASICV+GPGYVTA
Sbjct: 61 CITRVKFE--KVPHEYSTIKGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTA 118
Query: 910 QDIILPPCVEIVDNTQHIVNLTEPIDLCIELQIEKNGGVIV 1032
QDI+LPP VEIVDNTQHI +L EPIDLCIELQIE+N G ++
Sbjct: 119 QDIVLPPYVEIVDNTQHIASLMEPIDLCIELQIERNRGYLI 159
>YP_005296132.1 rpoA gene product (chloroplast) [Pentactina rupicola] AEX31764.1 RNA
polymerase alpha subunit (chloroplast) [Pentactina
rupicola]
Length = 326
Score = 286 bits (732), Expect = 9e-92
Identities = 143/158 (90%), Positives = 150/158 (94%)
Frame = +1
Query: 550 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 729
MVREKVTVSTRTLQWKCVESR DSKRLYYGRFIL+PLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRADSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 730 CITRVKFESEKIPHEYSTVGGIQESLHEILMNLKEIVLRSNIYGTCHASICVKGPGYVTA 909
CITR K SEKIPHEYST+ GIQES+HEILMNLKEIVLRSN+YGTC+ASICVKGPGYVTA
Sbjct: 61 CITRAK--SEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCNASICVKGPGYVTA 118
Query: 910 QDIILPPCVEIVDNTQHIVNLTEPIDLCIELQIEKNGG 1023
QDIILPP VEIVDNTQHI NLTEPI+LCIELQIE+N G
Sbjct: 119 QDIILPPSVEIVDNTQHIANLTEPINLCIELQIERNRG 156
>ALI91011.1 RpoA, partial (chloroplast) [Borago officinalis]
Length = 316
Score = 285 bits (729), Expect = 2e-91
Identities = 143/161 (88%), Positives = 150/161 (93%)
Frame = +1
Query: 550 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 729
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 730 CITRVKFESEKIPHEYSTVGGIQESLHEILMNLKEIVLRSNIYGTCHASICVKGPGYVTA 909
CITRVK KIPHEYST+ GIQES+HEILMNLK+IV RSNIYGTCHASICVKGPGYVTA
Sbjct: 61 CITRVK----KIPHEYSTMRGIQESVHEILMNLKKIVFRSNIYGTCHASICVKGPGYVTA 116
Query: 910 QDIILPPCVEIVDNTQHIVNLTEPIDLCIELQIEKNGGVIV 1032
QDIILPP VEIVDNTQHI +LTEP+DLCI LQIEKN G ++
Sbjct: 117 QDIILPPYVEIVDNTQHIASLTEPMDLCIGLQIEKNRGYLI 157
>YP_007353946.1 RNA polymerase alpha subunit (chloroplast) [Tectona grandis]
CCP47162.1 RNA polymerase alpha subunit (chloroplast)
[Tectona grandis] CCP47251.1 RNA polymerase alpha subunit
(chloroplast) [Tectona grandis] CCP47340.1 RNA polymerase
alpha subunit (chloroplast) [Tectona grandis]
Length = 337
Score = 284 bits (726), Expect = 1e-90
Identities = 140/161 (86%), Positives = 152/161 (94%)
Frame = +1
Query: 550 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 729
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 730 CITRVKFESEKIPHEYSTVGGIQESLHEILMNLKEIVLRSNIYGTCHASICVKGPGYVTA 909
CITRVK SE +PHEYST+ GIQES+HEI+MNLKEIVLRSN+YGTC ASICV+GPGYVTA
Sbjct: 61 CITRVK--SENVPHEYSTITGIQESVHEIIMNLKEIVLRSNLYGTCGASICVRGPGYVTA 118
Query: 910 QDIILPPCVEIVDNTQHIVNLTEPIDLCIELQIEKNGGVIV 1032
QDIILPP VEIVDNTQHI +LTEPI+LCIEL+IE+N G ++
Sbjct: 119 QDIILPPYVEIVDNTQHIASLTEPINLCIELEIERNRGYLI 159
>YP_009309483.1 RNA polymerase alpha subunit (chloroplast) [Paulownia coreana]
YP_009309570.1 RNA polymerase alpha subunit (chloroplast)
[Paulownia tomentosa] AKM21544.1 RNA polymerase alpha
subunit (chloroplast) [Paulownia coreana] AKM21631.1 RNA
polymerase alpha subunit (chloroplast) [Paulownia
tomentosa]
Length = 337
Score = 283 bits (725), Expect = 1e-90
Identities = 141/161 (87%), Positives = 151/161 (93%)
Frame = +1
Query: 550 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 729
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 730 CITRVKFESEKIPHEYSTVGGIQESLHEILMNLKEIVLRSNIYGTCHASICVKGPGYVTA 909
CITRVK SE +PHEYST+ GIQES+HEILMNLKEIVLRSN+YGTC ASICV+GPGYVTA
Sbjct: 61 CITRVK--SENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTA 118
Query: 910 QDIILPPCVEIVDNTQHIVNLTEPIDLCIELQIEKNGGVIV 1032
QDIILPP VEIVDNTQHI +LTEPI+LCI L+IEKN G ++
Sbjct: 119 QDIILPPYVEIVDNTQHIASLTEPINLCIGLEIEKNRGYLI 159
>YP_008563120.1 RNA polymerase alpha subunit (chloroplast) [Solanum lycopersicum]
YP_009131744.1 RNA polymerase alpha subunit (chloroplast)
[Solanum cheesmaniae] YP_009131993.1 RNA polymerase alpha
subunit (chloroplast) [Solanum habrochaites]
YP_009131827.1 RNA polymerase alpha subunit (chloroplast)
[Solanum chilense] YP_009131910.1 RNA polymerase alpha
subunit (chloroplast) [Solanum galapagense]
YP_009132159.1 RNA polymerase alpha subunit (chloroplast)
[Solanum peruvianum] YP_009132242.1 RNA polymerase alpha
subunit (chloroplast) [Solanum pimpinellifolium]
AP_004960.1 RNA polymerase alpha chain (chloroplast)
[Solanum lycopersicum] Q2MI69.1 RecName:
Full=DNA-directed RNA polymerase subunit alpha;
Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit alpha; Short=RNA polymerase subunit alpha
ABC56331.1 RNA polymerase alpha subunit (chloroplast)
[Solanum lycopersicum] CAJ32426.1 RNA polymerase alpha
chain (chloroplast) [Solanum lycopersicum] AJO25142.1 RNA
polymerase alpha subunit (chloroplast) [Solanum
lycopersicum] AJY78722.1 RNA polymerase alpha subunit
(chloroplast) [Solanum cheesmaniae] AJY78805.1 RNA
polymerase alpha subunit (chloroplast) [Solanum chilense]
AJY78888.1 RNA polymerase alpha subunit (chloroplast)
[Solanum galapagense] AJY78971.1 RNA polymerase alpha
subunit (chloroplast) [Solanum habrochaites] AJY79054.1
RNA polymerase alpha subunit (chloroplast) [Solanum
lycopersicum] AJY79220.1 RNA polymerase alpha subunit
(chloroplast) [Solanum peruvianum] AJY79303.1 RNA
polymerase alpha subunit (chloroplast) [Solanum
pimpinellifolium] ANC95265.1 RNA polymerase alpha subunit
(plastid) [Iochroma gesnerioides]
Length = 337
Score = 283 bits (725), Expect = 1e-90
Identities = 142/161 (88%), Positives = 150/161 (93%)
Frame = +1
Query: 550 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 729
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 730 CITRVKFESEKIPHEYSTVGGIQESLHEILMNLKEIVLRSNIYGTCHASICVKGPGYVTA 909
CITRVK SEK+PHEYST+ GIQES+HEILMNLKEIVLRSN+YGT ASICVKGPGYVTA
Sbjct: 61 CITRVK--SEKVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTSEASICVKGPGYVTA 118
Query: 910 QDIILPPCVEIVDNTQHIVNLTEPIDLCIELQIEKNGGVIV 1032
QDIILPP VEIVDNTQHI +LTEPID CI LQIE+N G ++
Sbjct: 119 QDIILPPYVEIVDNTQHIASLTEPIDFCIGLQIERNRGYLI 159
>ANS80948.1 DNA-directed RNA polymerase alpha subunit (chloroplast) [Ilex
pubescens] ANS81043.1 DNA-directed RNA polymerase alpha
subunit (chloroplast) [Ilex polyneura]
Length = 337
Score = 283 bits (724), Expect = 2e-90
Identities = 141/161 (87%), Positives = 149/161 (92%)
Frame = +1
Query: 550 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 729
MVREKVTVSTRTLQWKCVESR DSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 730 CITRVKFESEKIPHEYSTVGGIQESLHEILMNLKEIVLRSNIYGTCHASICVKGPGYVTA 909
CITR KFE KIPHEYST+ GIQES+HEILMNLKEIVLRSN+YGTC ASICV+GPGYVT
Sbjct: 61 CITRAKFE--KIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTT 118
Query: 910 QDIILPPCVEIVDNTQHIVNLTEPIDLCIELQIEKNGGVIV 1032
QDIILPP VEIVDNTQHI +LTEPIDLCI LQIE+N G ++
Sbjct: 119 QDIILPPYVEIVDNTQHIASLTEPIDLCIGLQIERNRGYLI 159
>ANS80853.1 DNA-directed RNA polymerase alpha subunit (chloroplast) [Ilex
szechwanensis]
Length = 337
Score = 283 bits (724), Expect = 2e-90
Identities = 141/161 (87%), Positives = 149/161 (92%)
Frame = +1
Query: 550 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 729
MVREKVTVSTRTLQWKCVESR DSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 730 CITRVKFESEKIPHEYSTVGGIQESLHEILMNLKEIVLRSNIYGTCHASICVKGPGYVTA 909
CITR KFE KIPHEYST+ GIQES+HEILMNLKEIVLRSN+YGTC ASICV+GPGYVT
Sbjct: 61 CITRAKFE--KIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTT 118
Query: 910 QDIILPPCVEIVDNTQHIVNLTEPIDLCIELQIEKNGGVIV 1032
QDIILPP VEIVDNTQHI +LTEPIDLCI LQIE+N G ++
Sbjct: 119 QDIILPPYVEIVDNTQHIASLTEPIDLCIGLQIERNRGYLI 159
>YP_009240630.1 RNA polymerase alpha subunit (chloroplast) [Iochroma cardenasianum]
AMP19607.1 RNA polymerase alpha subunit (chloroplast)
[Iochroma cardenasianum]
Length = 337
Score = 283 bits (724), Expect = 2e-90
Identities = 142/161 (88%), Positives = 150/161 (93%)
Frame = +1
Query: 550 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 729
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 730 CITRVKFESEKIPHEYSTVGGIQESLHEILMNLKEIVLRSNIYGTCHASICVKGPGYVTA 909
CITRVK SEK+PHEYST+ GIQES+HEILMNLKEIVLRSN+YGT ASICVKGPGYVTA
Sbjct: 61 CITRVK--SEKVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTSDASICVKGPGYVTA 118
Query: 910 QDIILPPCVEIVDNTQHIVNLTEPIDLCIELQIEKNGGVIV 1032
QDIILPP VEIVDNTQHI +LTEPID CI LQIE+N G ++
Sbjct: 119 QDIILPPYVEIVDNTQHIASLTEPIDFCIGLQIERNRGYLI 159
>ALI31173.1 RNA polymerase alpha subunit (chloroplast) [Solanum nigrum]
Length = 337
Score = 283 bits (724), Expect = 2e-90
Identities = 142/161 (88%), Positives = 150/161 (93%)
Frame = +1
Query: 550 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 729
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 730 CITRVKFESEKIPHEYSTVGGIQESLHEILMNLKEIVLRSNIYGTCHASICVKGPGYVTA 909
CITRVK SEK+PHEYST+ GIQES+HEILMNLKEIVLRSN+YGT ASICVKGPGYVTA
Sbjct: 61 CITRVK--SEKVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTSDASICVKGPGYVTA 118
Query: 910 QDIILPPCVEIVDNTQHIVNLTEPIDLCIELQIEKNGGVIV 1032
QDIILPP VEIVDNTQHI +LTEPID CI LQIE+N G ++
Sbjct: 119 QDIILPPYVEIVDNTQHIASLTEPIDFCIGLQIERNRGYLI 159
>YP_009171899.1 RpoA (chloroplast) [Solanum nigrum] AKM21976.1 RpoA (chloroplast)
[Solanum nigrum] AKZ23811.1 RNA polymerase alpha subunit
(plastid) [Solanum triflorum]
Length = 337
Score = 283 bits (724), Expect = 2e-90
Identities = 142/161 (88%), Positives = 150/161 (93%)
Frame = +1
Query: 550 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 729
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 730 CITRVKFESEKIPHEYSTVGGIQESLHEILMNLKEIVLRSNIYGTCHASICVKGPGYVTA 909
CITRVK SEK+PHEYST+ GIQES+HEILMNLKEIVLRSN+YGT ASICVKGPGYVTA
Sbjct: 61 CITRVK--SEKVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTSDASICVKGPGYVTA 118
Query: 910 QDIILPPCVEIVDNTQHIVNLTEPIDLCIELQIEKNGGVIV 1032
QDIILPP VEIVDNTQHI +LTEPID CI LQIE+N G ++
Sbjct: 119 QDIILPPYVEIVDNTQHIASLTEPIDFCIGLQIERNRGYLI 159
>YP_538881.1 RNA polymerase alpha subunit [Solanum bulbocastanum] YP_635671.1 RNA
polymerase alpha subunit [Solanum tuberosum]
YP_009171813.1 RpoA (chloroplast) [Solanum commersonii]
Q2VEE8.1 RecName: Full=DNA-directed RNA polymerase
subunit alpha; Short=PEP; AltName: Full=Plastid-encoded
RNA polymerase subunit alpha; Short=RNA polymerase
subunit alpha Q2MIF6.1 RecName: Full=DNA-directed RNA
polymerase subunit alpha; Short=PEP; AltName:
Full=Plastid-encoded RNA polymerase subunit alpha;
Short=RNA polymerase subunit alpha ABB90071.1 RNA
polymerase alpha chain (chloroplast) [Solanum tuberosum]
ABC56244.1 RNA polymerase alpha subunit (chloroplast)
[Solanum bulbocastanum] ABD47088.1 RNA polymerase alpha
subunit (chloroplast) [Solanum tuberosum] AEB72171.1 RNA
polymerase alpha subunit (chloroplast) [Solanum
tuberosum] AEB72257.1 RNA polymerase alpha subunit
(chloroplast) [Solanum tuberosum] AKM21890.1 RpoA
(chloroplast) [Solanum commersonii] AKM22062.1 RpoA
(chloroplast) [Solanum tuberosum]
Length = 337
Score = 283 bits (724), Expect = 2e-90
Identities = 142/161 (88%), Positives = 150/161 (93%)
Frame = +1
Query: 550 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 729
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 730 CITRVKFESEKIPHEYSTVGGIQESLHEILMNLKEIVLRSNIYGTCHASICVKGPGYVTA 909
CITRVK SEK+PHEYST+ GIQES+HEILMNLKEIVLRSN+YGT ASICVKGPGYVTA
Sbjct: 61 CITRVK--SEKVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTSDASICVKGPGYVTA 118
Query: 910 QDIILPPCVEIVDNTQHIVNLTEPIDLCIELQIEKNGGVIV 1032
QDIILPP VEIVDNTQHI +LTEPID CI LQIE+N G ++
Sbjct: 119 QDIILPPYVEIVDNTQHIASLTEPIDFCIGLQIERNRGYLI 159
>NP_783263.1 RNA polymerase alpha subunit [Atropa belladonna] Q8S8V9.1 RecName:
Full=DNA-directed RNA polymerase subunit alpha;
Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit alpha; Short=RNA polymerase subunit alpha
CAC88076.1 RNA polymerase alpha subunit (chloroplast)
[Atropa belladonna]
Length = 337
Score = 283 bits (724), Expect = 2e-90
Identities = 140/161 (86%), Positives = 150/161 (93%)
Frame = +1
Query: 550 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 729
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 730 CITRVKFESEKIPHEYSTVGGIQESLHEILMNLKEIVLRSNIYGTCHASICVKGPGYVTA 909
CITRVKFE K+PHEYST+ GIQES+HEI+MNLKEIVLRSN+YGT AS+CVKGPGYVTA
Sbjct: 61 CITRVKFE--KVPHEYSTITGIQESVHEIIMNLKEIVLRSNLYGTSEASVCVKGPGYVTA 118
Query: 910 QDIILPPCVEIVDNTQHIVNLTEPIDLCIELQIEKNGGVIV 1032
QDIILPP VEIVDNTQHI +LTEPID CI LQIE+N G ++
Sbjct: 119 QDIILPPYVEIVDNTQHIASLTEPIDFCIGLQIERNRGYLI 159
>YP_009132076.1 RNA polymerase alpha subunit (chloroplast) [Solanum neorickii]
AJY79137.1 RNA polymerase alpha subunit (chloroplast)
[Solanum neorickii]
Length = 337
Score = 283 bits (724), Expect = 2e-90
Identities = 141/161 (87%), Positives = 150/161 (93%)
Frame = +1
Query: 550 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 729
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 730 CITRVKFESEKIPHEYSTVGGIQESLHEILMNLKEIVLRSNIYGTCHASICVKGPGYVTA 909
CITRVK SEK+PHEYST+ GIQES+HEILMNLKE+VLRSN+YGT ASICVKGPGYVTA
Sbjct: 61 CITRVK--SEKVPHEYSTITGIQESVHEILMNLKEVVLRSNLYGTSEASICVKGPGYVTA 118
Query: 910 QDIILPPCVEIVDNTQHIVNLTEPIDLCIELQIEKNGGVIV 1032
QDIILPP VEIVDNTQHI +LTEPID CI LQIE+N G ++
Sbjct: 119 QDIILPPYVEIVDNTQHIASLTEPIDFCIGLQIERNRGYLI 159
>ADD31215.1 RNA polymerase alpha subunit protein (chloroplast) [Ilex cornuta]
ANS80758.1 DNA-directed RNA polymerase alpha subunit
(chloroplast) [Ilex latifolia] ANS81138.1 DNA-directed
RNA polymerase alpha subunit (chloroplast) [Ilex sp.
XY-2016] ANS81233.1 DNA-directed RNA polymerase alpha
subunit (chloroplast) [Ilex delavayi] ANS81328.1
DNA-directed RNA polymerase alpha subunit (chloroplast)
[Ilex wilsonii]
Length = 337
Score = 283 bits (724), Expect = 2e-90
Identities = 141/161 (87%), Positives = 149/161 (92%)
Frame = +1
Query: 550 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 729
MVREKVTVSTRTLQWKCVESR DSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 730 CITRVKFESEKIPHEYSTVGGIQESLHEILMNLKEIVLRSNIYGTCHASICVKGPGYVTA 909
CITR KFE KIPHEYST+ GIQES+HEILMNLKEIVLRSN+YGTC ASICV+GPGYVT
Sbjct: 61 CITRAKFE--KIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTT 118
Query: 910 QDIILPPCVEIVDNTQHIVNLTEPIDLCIELQIEKNGGVIV 1032
QDIILPP VEIVDNTQHI +LTEPIDLCI LQIE+N G ++
Sbjct: 119 QDIILPPYVEIVDNTQHIASLTEPIDLCIGLQIERNRGYLI 159
>YP_009336414.1 RNA polymerase alpha subunit (chloroplast) [Nicotiana otophora]
ALT14509.1 RNA polymerase alpha subunit (chloroplast)
[Nicotiana otophora]
Length = 337
Score = 283 bits (723), Expect = 3e-90
Identities = 142/161 (88%), Positives = 150/161 (93%)
Frame = +1
Query: 550 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 729
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 730 CITRVKFESEKIPHEYSTVGGIQESLHEILMNLKEIVLRSNIYGTCHASICVKGPGYVTA 909
CITRVK SEK+PHEYST+ GIQES+HEILMNLKEIVLRSN+YGT ASICVKGPGYVTA
Sbjct: 61 CITRVK--SEKVPHEYSTIMGIQESVHEILMNLKEIVLRSNLYGTSDASICVKGPGYVTA 118
Query: 910 QDIILPPCVEIVDNTQHIVNLTEPIDLCIELQIEKNGGVIV 1032
QDIILPP VEIVDNTQHI +LTEPID CI LQIE+N G ++
Sbjct: 119 QDIILPPYVEIVDNTQHIASLTEPIDFCIGLQIERNRGYLI 159
>YP_004891639.1 rpoA gene product (chloroplast) [Nicotiana undulata] AEO95601.1 RNA
polymerase alpha subunit (chloroplast) [Nicotiana
undulata] AEO95711.1 RNA polymerase alpha subunit
[synthetic construct]
Length = 337
Score = 283 bits (723), Expect = 3e-90
Identities = 142/161 (88%), Positives = 150/161 (93%)
Frame = +1
Query: 550 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 729
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 730 CITRVKFESEKIPHEYSTVGGIQESLHEILMNLKEIVLRSNIYGTCHASICVKGPGYVTA 909
CITRVK SEK+PHEYST+ GIQES+HEILMNLKEIVLRSN+YGT ASICVKGPGYVTA
Sbjct: 61 CITRVK--SEKVPHEYSTIMGIQESVHEILMNLKEIVLRSNLYGTSDASICVKGPGYVTA 118
Query: 910 QDIILPPCVEIVDNTQHIVNLTEPIDLCIELQIEKNGGVIV 1032
QDIILPP VEIVDNTQHI +LTEPID CI LQIE+N G ++
Sbjct: 119 QDIILPPFVEIVDNTQHIASLTEPIDFCIGLQIERNRGYLI 159