BLASTX nr result
ID: Lithospermum23_contig00026009
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00026009
(1893 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
OMO94717.1 Integrase, catalytic core [Corchorus capsularis] 149 6e-40
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 132 1e-38
CAH67640.1 H0102C09.1 [Oryza sativa Indica Group] 130 1e-37
AAT07563.1 putative polyprotein [Oryza sativa Japonica Group] AA... 120 7e-37
ABA97008.1 retrotransposon protein, putative, Ty1-copia subclass... 123 1e-36
CAN64418.1 hypothetical protein VITISV_030041 [Vitis vinifera] 126 1e-36
CAN74695.1 hypothetical protein VITISV_024648 [Vitis vinifera] 124 3e-36
AAU10682.1 putative polyprotein [Oryza sativa Japonica Group] 124 4e-36
AAN04167.1 Putative copia-like retrotransposon polyprotein [Oryz... 125 8e-36
AAC61290.1 putative retroelement pol polyprotein [Arabidopsis th... 125 1e-34
ABG00000.1 retrotransposon protein, putative, Ty1-copia subclass... 117 2e-34
OMO75820.1 Integrase, catalytic core [Corchorus capsularis] 117 2e-34
AAT85031.1 putative polyprotein [Oryza sativa Japonica Group] AB... 117 7e-34
XP_018853333.1 PREDICTED: uncharacterized protein LOC109015311, ... 145 9e-34
AAU43956.1 unknown protein [Oryza sativa Japonica Group] AAU4406... 114 9e-34
CAN63649.1 hypothetical protein VITISV_037657 [Vitis vinifera] 125 9e-34
CAN68489.1 hypothetical protein VITISV_037543 [Vitis vinifera] 122 2e-33
ACY72569.1 unknown [Oryza sativa Japonica Group] 116 8e-33
BAA78426.1 polyprotein [Arabidopsis thaliana] 119 1e-32
BAM42649.1 Polyprotein [Arabidopsis thaliana] 119 1e-32
>OMO94717.1 Integrase, catalytic core [Corchorus capsularis]
Length = 1198
Score = 149 bits (375), Expect(2) = 6e-40
Identities = 98/290 (33%), Positives = 143/290 (49%), Gaps = 25/290 (8%)
Frame = +2
Query: 920 RGRGFAQPTQRFTRSGSNFQAWPNYSGSTPRFQACQLCQSNDHIAPQCPRFVNVEVHLIT 1099
RGRG + RS ++ Q PN++ + P CQ+C H A C +
Sbjct: 113 RGRGRSNFRFNGNRSYTHQQQSPNHNNNRP---TCQICDKFGHSAKLCRKGKQFFNTPPP 169
Query: 1100 TTSIHRFQRSPSNIWYPDTGATYHVTPDLAALQSFDEY----------------ACTLVT 1231
T ++ S S+ W DTGAT+HVT L EY + + +
Sbjct: 170 TANVATLSGSSSS-WCMDTGATHHVTSQFQNLSLASEYDGPDQIVVGNGQGLDISHSGLV 228
Query: 1232 EQV*PNRVFHLTDILHVPEMTKSLLSVQKFCRDNNAIFEFSDSGFLIKDKPTQRIILTGL 1411
+ N+ F L D+L VP M ++L+SV KFC++N EF D FL+KD T++++ GL
Sbjct: 229 DLRTSNKQFQLKDVLFVPSMKQNLISVSKFCKNNGVFIEFYDDYFLVKDLQTRQVLTKGL 288
Query: 1412 ASNGHYSF-------QPAAYSASASSKVWHHRLGHPHSRVLQQVISRHRLGVFS--KFDC 1564
++G Y A S S S WH+RLGHP VL QV+++ L S F C
Sbjct: 289 LTDGIYRLPATILRSHVALSSRSLSLHGWHNRLGHPSKSVLGQVVNQFELSSASNKNFLC 348
Query: 1565 FSCPLGKACRQSFSASPNKSSRVLNLIFTDVWGRAPKLSFDGMRFYVLFV 1714
+C K+ + SF+ S SSR L I++DVW AP++S DG +Y++FV
Sbjct: 349 TACQCSKSHKLSFALSSLTSSRPLETIYSDVWVPAPQISMDGFSYYIIFV 398
Score = 46.2 bits (108), Expect(2) = 6e-40
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +3
Query: 1695 GFMFYLLLI--LGASIWLFPIASKSDVYSTFIHFQKLVERQFSTKIKSVQSDWGGEFRPL 1868
GF +Y++ + W +P+ KSD++ F F+ +VE F KI+++ SD GGE+ L
Sbjct: 390 GFSYYIIFVDHYTRYTWYYPLKRKSDLFLLFPKFKVMVEAYFQLKIQTIYSDGGGEYEHL 449
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch AAA57005.1
copia-like retrotransposon Hopscotch polyprotein [Zea
mays]
Length = 1439
Score = 132 bits (331), Expect(2) = 1e-38
Identities = 102/307 (33%), Positives = 141/307 (45%), Gaps = 33/307 (10%)
Frame = +2
Query: 911 SRGRGRGFAQPTQRFTRSGSNFQAWPNYSGSTPRFQA----CQLCQSNDHIAPQC-PRFV 1075
SRGRGRG F +F NYSG+T + CQ+C H A C RF
Sbjct: 245 SRGRGRGRGPSRGGF----QSFGRGNNYSGATDADTSSRPRCQVCSRVGHTALNCWYRFD 300
Query: 1076 NVEVHLITTTSIHRFQRSPSNIWYPDTGATYHVTPDLAALQSFDEYACT----------- 1222
V + + Q + WY DTGAT H+T DL L D+Y T
Sbjct: 301 ENYVPDQRSANSAAHQNGSNVPWYTDTGATDHITGDLDRLTMHDKYTGTDQIIAANGTGM 360
Query: 1223 ---LVTEQV*P--NRVFHLTDILHVPEMTKSLLSVQKFCRDNNAIFEFSDSGFLIKDKPT 1387
+ + P +R HL +LHVP K+L+SV + DN+ EF S FLIKD+ T
Sbjct: 361 TISNIGNAIVPTSSRSLHLRSVLHVPSTHKNLISVHRLTNDNDVFIEFHSSHFLIKDRQT 420
Query: 1388 QRIILTGLASNGHYSFQPAA--------YSASASSKVWHHRLGHPHSRVLQQVISRHRLG 1543
+ ++L G +G Y P S + WH RLGHP ++ +VIS + L
Sbjct: 421 KAVLLHGKCRDGLYPLPPHPDLRLKHNFSSTRVPLEHWHKRLGHPSRDIVHRVISNNNLP 480
Query: 1544 VFSKFD----CFSCPLGKACRQSFSASPNKSSRVLNLIFTDVWGRAPKLSFDGMRFYVLF 1711
S C +C KA + ++ S ++SS L LIF+DV+G A SF ++YV F
Sbjct: 481 CLSNNSTTSVCDACLQAKAHQLPYTISMSQSSAPLMLIFSDVFGPAID-SFGRYKYYVSF 539
Query: 1712 VVDFRCF 1732
+ D+ F
Sbjct: 540 IDDYSKF 546
Score = 58.9 bits (141), Expect(2) = 1e-38
Identities = 25/48 (52%), Positives = 33/48 (68%)
Frame = +3
Query: 1737 WLFPIASKSDVYSTFIHFQKLVERQFSTKIKSVQSDWGGEFRPLHKYF 1880
W++ + KSDVY +F FQ LVER F KI + QSDWGGE+ L+ +F
Sbjct: 548 WIYLLRHKSDVYKSFCEFQHLVERMFGRKIIAFQSDWGGEYEKLNAHF 595
>CAH67640.1 H0102C09.1 [Oryza sativa Indica Group]
Length = 1825
Score = 130 bits (328), Expect(2) = 1e-37
Identities = 96/304 (31%), Positives = 142/304 (46%), Gaps = 32/304 (10%)
Frame = +2
Query: 917 GRGRGFAQPTQRFTRSG-SNFQAWPNYSGSTPRFQACQLCQSNDHIAPQC-PRFVN--VE 1084
GRGRG + G N Q +Y CQ+C H+A C RF V
Sbjct: 378 GRGRGATRGRGAAPGRGRGNNQQQRSYDNRP----LCQVCYKRGHVAADCWHRFDEDFVP 433
Query: 1085 VHLITTTSIHRFQRSPSNIWYPDTGATYHVTPDLAALQSFDEY----------ACTLVTE 1234
+ +IH R + WY DTGAT H+T +L L + D Y + +
Sbjct: 434 DDKLVAAAIHTHARDSN--WYVDTGATDHITSELEKLTARDVYKGHDQIHTASGSGMEIK 491
Query: 1235 QV------*PNRVFHLTDILHVPEMTKSLLSVQKFCRDNNAIFEFSDSGFLIKDKPTQRI 1396
+ P R HL ++LHVP+ K+L+S K DN+ E FLIKD+ T+R
Sbjct: 492 HIGHSIVHTPTRPLHLNNVLHVPQANKNLISAHKLAADNSVFLEIHSKHFLIKDQATRRT 551
Query: 1397 ILTGLASNGHYSFQPAAYSASA--------SSKVWHHRLGHPHSRVLQQVISRHRLGVFS 1552
+L G G Y A+ +SA S + WH RLGH + ++ +VIS+++L
Sbjct: 552 VLKGRRQKGLYPVPSASPPSSAKVVCAVTPSFERWHSRLGHSSAPIISRVISKNKLPCLD 611
Query: 1553 KFD----CFSCPLGKACRQSFSASPNKSSRVLNLIFTDVWGRAPKLSFDGMRFYVLFVVD 1720
+ + C +C K+ + +S S + SS L L+F+DVWG AP +S ++YV F+ D
Sbjct: 612 ESNKESVCDACLKAKSHQLPYSKSLSISSHPLELVFSDVWGPAP-VSVGNKKYYVSFIDD 670
Query: 1721 FRCF 1732
+ F
Sbjct: 671 YSKF 674
Score = 56.2 bits (134), Expect(2) = 1e-37
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = +3
Query: 1737 WLFPIASKSDVYSTFIHFQKLVERQFSTKIKSVQSDWGGEFRPLHKYF 1880
W++ + +KS+V+ F FQ LVER F KI S+Q+DWGGE++ L+ +F
Sbjct: 676 WIYLLKNKSEVFQKFHDFQNLVERLFDRKIISMQTDWGGEYQKLNSFF 723
Score = 63.9 bits (154), Expect = 8e-07
Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 13/142 (9%)
Frame = +1
Query: 394 ISLKLTDHNHSFWKK*IVPFSKGQNLYHHVDGSIPPP-------------SPTSSDFAAW 534
++ KL+ NH W ++ +G L H++G P P ++ ++ W
Sbjct: 156 VTEKLSKANHGLWVAQVLTAIRGARLEGHINGKNPAPPAEITKTVDGKEVKTSNPNYDEW 215
Query: 535 YQRDQCVLSMIISSLTEEVMLIPMSHDSAWDFWLALERTLASDYLTRSLQLHAALHDLKQ 714
+ DQ +L + SSLT E +L + +A + W L+ S RSL + AL L++
Sbjct: 216 FAADQQILGFLFSSLTRETLLQVAAVKTAAEAWKTLDDMFTSRTRARSLNVRLALTTLQK 275
Query: 715 NDLSVSAYLSKDKVLYTDMEAS 780
+ S+S Y+ K K L ++ A+
Sbjct: 276 GNSSISEYIGKMKTLADEVAAA 297
>AAT07563.1 putative polyprotein [Oryza sativa Japonica Group] AAT07631.1
putative polyprotein [Oryza sativa Japonica Group]
Length = 1431
Score = 120 bits (301), Expect(2) = 7e-37
Identities = 86/266 (32%), Positives = 123/266 (46%), Gaps = 29/266 (10%)
Frame = +2
Query: 1022 CQLCQSNDHIAPQC-PRFVNVEVHLITTTSIHRFQRSPSNIWYPDTGATYHVTPDLAALQ 1198
CQ+C H+A C R+ + V + WY DTGAT H+T L L
Sbjct: 272 CQVCHKRGHVASDCWHRYDDSYVPDEKLGGAATYAYGVDTNWYVDTGATDHITGQLDKLT 331
Query: 1199 SFDEYACTLVTEQV*-------------------PNRVFHLTDILHVPEMTKSLLSVQKF 1321
+ + Y T +Q+ P+ HL ++LHVPE K+L+SV K
Sbjct: 332 TKERYKGT---DQIHTASGEGTSIKHVGHAIVPTPSHPLHLKNVLHVPEAAKNLVSVHKL 388
Query: 1322 CRDNNAIFEFSDSGFLIKDKPTQRIILTGLASNGHY-----SFQPAAYSASASSKVWHHR 1486
DN A E FLIKDK T+R IL G G Y S A+ A+ S WH R
Sbjct: 389 VADNYAFLEIHGKYFLIKDKATRRTILEGPCRRGLYPLPARSSLRQAFVATPSFVRWHGR 448
Query: 1487 LGHPHSRVLQQVISRHRLGVFS----KFDCFSCPLGKACRQSFSASPNKSSRVLNLIFTD 1654
LGHP ++ +++S+++L S + C +C K + F S + S+ L LI +D
Sbjct: 449 LGHPSKPIVLRILSQNKLPCLSNSVNESVCDACQQAKCHQLPFPRSTSVSNNPLELIHSD 508
Query: 1655 VWGRAPKLSFDGMRFYVLFVVDFRCF 1732
VWG A + S ++YV F+ D+ F
Sbjct: 509 VWGPASE-SVGAKKYYVSFIDDYSKF 533
Score = 64.3 bits (155), Expect(2) = 7e-37
Identities = 26/52 (50%), Positives = 38/52 (73%)
Frame = +3
Query: 1734 IWLFPIASKSDVYSTFIHFQKLVERQFSTKIKSVQSDWGGEFRPLHKYFTDL 1889
+W++ + KS+V+ F FQKLVERQF KI S+Q+DWGGE+ LH +F ++
Sbjct: 534 VWIYFLKHKSEVFQKFHEFQKLVERQFDRKILSMQTDWGGEYLKLHTFFNEI 585
>ABA97008.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1202
Score = 123 bits (308), Expect(2) = 1e-36
Identities = 94/305 (30%), Positives = 135/305 (44%), Gaps = 29/305 (9%)
Frame = +2
Query: 905 FNSRGRGRGFAQPTQRFTRSGSNFQAWPNYSGSTPRFQACQLCQSNDHIAPQC-PRFVNV 1081
F GRGRG + G++ + CQ+C H+A C R+ +
Sbjct: 254 FGRGGRGRGAPSGASQGRGRGNDTRP------------VCQVCHKRGHVASDCWHRYDDS 301
Query: 1082 EVHLITTTSIHRFQRSPSNIWYPDTGATYHVTPDLAALQSFDEYACTLVTEQV*------ 1243
V + WY DTGAT H+T L L + + Y T +Q+
Sbjct: 302 YVPDEKLGGAATYAYGIDTNWYVDTGATDHITGQLDKLTTKERYKGT---DQIHTASGEG 358
Query: 1244 -------------PNRVFHLTDILHVPEMTKSLLSVQKFCRDNNAIFEFSDSGFLIKDKP 1384
P+R HL ++LHVPE K+L+SV K DN A E FLIKDK
Sbjct: 359 MSIKHVGHAIVPTPSRPLHLKNVLHVPEAAKNLVSVHKLVADNYAFLEIHGKYFLIKDKA 418
Query: 1385 TQRIILTGLASNGHY-----SFQPAAYSASASSKVWHHRLGHPHSRVLQQVISRHRLGVF 1549
T+R IL G G Y S A+ A+ S WH RLGHP ++ +++S+++L
Sbjct: 419 TRRTILEGPCRRGLYPLPARSSLRQAFVATPSFVRWHGRLGHPSKPIVLRILSQNKLPCL 478
Query: 1550 S----KFDCFSCPLGKACRQSFSASPNKSSRVLNLIFTDVWGRAPKLSFDGMRFYVLFVV 1717
S + C +C K + F S + S+ L LI +DVWG A + S ++YV F+
Sbjct: 479 SNSVNESVCDACQQAKCHQLPFPRSTSVSNNPLELIHSDVWGPASE-SVGAKKYYVSFID 537
Query: 1718 DFRCF 1732
D+ F
Sbjct: 538 DYSKF 542
Score = 61.2 bits (147), Expect(2) = 1e-36
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = +3
Query: 1734 IWLFPIASKSDVYSTFIHFQKLVERQFSTKIKSVQSDWGGEFRPLHKYFTDL 1889
+W++ + KS+V+ F FQKLVE QF KI S+Q+DWGGE+ LH +F ++
Sbjct: 543 VWIYFLKHKSEVFQKFHEFQKLVEWQFDRKILSMQTDWGGEYLKLHTFFNEI 594
>CAN64418.1 hypothetical protein VITISV_030041 [Vitis vinifera]
Length = 1429
Score = 126 bits (316), Expect(2) = 1e-36
Identities = 91/263 (34%), Positives = 126/263 (47%), Gaps = 29/263 (11%)
Frame = +2
Query: 1022 CQLCQSNDHIAPQCPRFVNVE--VHLITTTSIHRFQRSPSNIWYPDTGATYHVTPDLAAL 1195
CQ C HIA CP+ E V+ TTTS SP W D+ A++++T ++ L
Sbjct: 153 CQYCDQQGHIAKYCPKLXPSEATVNCTTTTS------SPDKRWLIDSMASHNITSQVSNL 206
Query: 1196 QSFDEYACT-----------LVTEQ-----V*PNRVFHLTDILHVPEMTKSLLSVQKFCR 1327
Q EY T +T PNR F + D L VP + K+L+SV + +
Sbjct: 207 QFHSEYDGTDEVIIGDGSGLPITHSGSLTLSFPNRKFQVEDTLCVPTINKNLISVHHYTK 266
Query: 1328 DNNAIFEFSDSGFLIKDKPTQRIILTGLASNGHY--SFQPAAYSAS-----ASSKVWHHR 1486
NN I EF + FL KD T I+L G NG Y + PAA + S+ WH R
Sbjct: 267 QNNVILEFHPTYFLAKDWRTGEILLQGPCENGVYPLASSPAATPIAFVHERTSAXGWHXR 326
Query: 1487 LGHPHSRVLQQVISRHRLGVFS----KFDCFSCPLGKACRQSFSASPNKSSRVLNLIFTD 1654
LGH +V+ ++IS L S +C SC KA + F S+ +L++TD
Sbjct: 327 LGHRSFKVVXRLISSFSLPTTSCLSGSNNCHSCSXNKAHQLPFHKHGLTSTTPFDLLYTD 386
Query: 1655 VWGRAPKLSFDGMRFYVLFVVDF 1723
VWG +P S +G R+YV+FV F
Sbjct: 387 VWGPSPTPSLNGHRYYVIFVDHF 409
Score = 57.8 bits (138), Expect(2) = 1e-36
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = +3
Query: 1737 WLFPIASKSDVYSTFIHFQKLVERQFSTKIKSVQSDWGGEFRPLHKYFT 1883
W FP+ KSDV + F HF K++E +F+ KIK V SD GGEF L +FT
Sbjct: 414 WFFPLHQKSDVKTIFPHFYKMIETRFNIKIKGVYSDNGGEFTVLRPFFT 462
>CAN74695.1 hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 124 bits (310), Expect(2) = 3e-36
Identities = 93/337 (27%), Positives = 140/337 (41%), Gaps = 73/337 (21%)
Frame = +2
Query: 923 GRGFAQPTQRFTRSGSNFQAWPNYSGSTPRFQACQLCQSNDHIAPQC------------- 1063
G G FT+ G ++ G+ CQLC H+ QC
Sbjct: 255 GNGMQHFRGNFTQQGRGRHGRGSWKGNNK--PQCQLCGRIGHVVMQCYYRFDQSFTGPSQ 312
Query: 1064 ---PRFVNVEVHLITTTSIHRFQRSPS-----------NIWYPDTGATYHVTPDLAALQS 1201
R HL S F +PS N WYPD+GAT+H+TP+L L +
Sbjct: 313 LQGNRPQGNMAHLHQQLSEXFFPGTPSVKPTTAEIIQDNNWYPDSGATHHLTPNLNNLLT 372
Query: 1202 FDEYAC-------------------TLVTEQV*PNRVFHLTDILHVPEMTKSLLSVQKFC 1324
++ T + P++ L +LHVPE+TK+LLSV KF
Sbjct: 373 KSQFPSSDEVFVGNGKGLPIHHIGHTSFSSSFIPSKTLALKQLLHVPEITKNLLSVSKFA 432
Query: 1325 RDNNAIFEFSDSGFLIKDKPTQRIILTGLASNGHYSF----------------------- 1435
DN+ FEF + +KD T+ +++ G G Y F
Sbjct: 433 ADNHVFFEFHPTSCFVKDPSTRTVLMHGQLKGGLYVFDNTQLKLPLHNSSCFASTALPSK 492
Query: 1436 QPAAYSASASS-KVWHHRLGHPHSRVLQQVISRHRLGVFSKFD---CFSCPLGKACRQSF 1603
+P ++ S +WH+RLGHP S ++ V+++ L +K C C +GK + SF
Sbjct: 493 EPTVPASPTSPFTLWHNRLGHPSSHIVSLVLNKCNLPHLNKIPSLICSXCCMGKIHKSSF 552
Query: 1604 SASPNKSSRVLNLIFTDVWGRAPKLSFDGMRFYVLFV 1714
S + ++ L LI TD+WG A S G ++Y+ F+
Sbjct: 553 LHSTSSYTKPLELIHTDLWGPASTPSSHGHQYYIHFI 589
Score = 58.9 bits (141), Expect(2) = 3e-36
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +3
Query: 1695 GFMFYLLLILGAS--IWLFPIASKSDVYSTFIHFQKLVERQFSTKIKSVQSDWGGEFRPL 1868
G +Y+ I S W++ + KS+ + F+HF+ VE Q KIK+VQSDWGGE+R
Sbjct: 581 GHQYYIHFIDAYSRFTWIYMLKHKSEAFQVFLHFKSQVELQLGHKIKAVQSDWGGEYRSF 640
Query: 1869 HKYFT 1883
+Y T
Sbjct: 641 TQYLT 645
Score = 61.2 bits (147), Expect = 5e-06
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 11/144 (7%)
Frame = +1
Query: 394 ISLKLTDHNHSFWKK*IVPFSKGQNLYHHV-DGSIPPPSPTSSD----------FAAWYQ 540
+S KL +HN +K I+ +G L H + + S+ P SSD F W Q
Sbjct: 19 VSSKLDNHNFLVXRKQILTTLRGHKLQHFLSETSVLPSEFLSSDDETQNHVNPKFQDWEQ 78
Query: 541 RDQCVLSMIISSLTEEVMLIPMSHDSAWDFWLALERTLASDYLTRSLQLHAALHDLKQND 720
+ Q ++S +++S+T+ ++ ++ D++ W LE A+ + Q LH+ K+ D
Sbjct: 79 QXQLIMSXLLASITDALLTRMVNCDTSAQVWKTLELYFATQVRAKVTQFKTQLHNTKKGD 138
Query: 721 LSVSAYLSKDKVLYTDMEASYGYR 792
LS+S YL K + + D+ A G++
Sbjct: 139 LSISDYLLKIRNV-VDLLALVGHK 161
>AAU10682.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1210
Score = 124 bits (311), Expect(2) = 4e-36
Identities = 99/310 (31%), Positives = 139/310 (44%), Gaps = 34/310 (10%)
Frame = +2
Query: 905 FNSRGRG--RGFAQPTQRFTRSGSNFQAWPNYSGSTPRFQACQLCQSNDHIAPQCPRFVN 1078
F++RGRG RG R G NF+ P CQLC H+ C +
Sbjct: 246 FSNRGRGGGRGDRGGCGR-GNGGRNFKPRPT----------CQLCSKVGHVVADCWHCYD 294
Query: 1079 VEVHLITTTSIHRFQRSPSNIWYPDTGATYHVTPDLAALQSFDEY--------------- 1213
+ SN WY DTGAT H+T +L L + D Y
Sbjct: 295 DSFVPDARVAAAASYGVDSN-WYVDTGATDHITNELEKLTTRDRYNGKEQIHTASGSGMD 353
Query: 1214 -----ACTLVTEQV*PNRVFHLTDILHVPEMTKSLLSVQKFCRDNNAIFEFSDSGFLIKD 1378
T+ T P R +L +ILHVP K+L+S + DN+A E F IKD
Sbjct: 354 IKHIGQSTIRT----PTRNLYLRNILHVPRTKKNLISAHRLAVDNHAFVEVHPRFFAIKD 409
Query: 1379 KPTQRIILTGLASNGHYSFQPAAYSAS--------ASSKVWHHRLGHPHSRVLQQVISRH 1534
+ T+ +L G NG Y PA+ S+S + +WH RLGHP +++Q+V+S +
Sbjct: 410 QITKNTLLRGPCCNGLYPL-PASTSSSKQVLGAIKPTVSIWHSRLGHPSWQIVQKVVSHN 468
Query: 1535 RLGVFSKFD----CFSCPLGKACRQSFSASPNKSSRVLNLIFTDVWGRAPKLSFDGMRFY 1702
L + C +C GK+ + F S + S+ L L+F+DVWG AP S G ++Y
Sbjct: 469 NLPCLGESKELGVCDACQKGKSHQLPFLKSTSASNFPLELVFSDVWGPAPD-SVGGRKYY 527
Query: 1703 VLFVVDFRCF 1732
V F+ DF F
Sbjct: 528 VSFIDDFSKF 537
Score = 58.2 bits (139), Expect(2) = 4e-36
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = +3
Query: 1737 WLFPIASKSDVYSTFIHFQKLVERQFSTKIKSVQSDWGGEFRPLHKYFTDL 1889
W++ + KS+V+ F FQ+LVER F KI ++Q+DWGGE+ LH +FT +
Sbjct: 539 WIYLLKQKSEVFHKFHEFQQLVERIFYRKIIAMQTDWGGEYEKLHDFFTKI 589
Score = 62.8 bits (151), Expect = 2e-06
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 16/146 (10%)
Frame = +1
Query: 391 SISLKLTDHNHSFWKK*IVPFSKGQNLYHHVDGSIPPPSP----------------TSSD 522
+IS KLT +N S WK I+P G + ++ G+ PS ++
Sbjct: 16 AISEKLTKNNFSLWKTHILPVICGARMEGYLTGATQVPSAEIEVKEGEKGEITKKVSNPA 75
Query: 523 FAAWYQRDQCVLSMIISSLTEEVMLIPMSHDSAWDFWLALERTLASDYLTRSLQLHAALH 702
+ AW DQ VL ++SS+++E+++ + D+A W + L++ R+L AL
Sbjct: 76 YEAWIAADQQVLGFLLSSISKEILIQVANVDTAAHAWKMIVGLLSTQSRARALNTRIALA 135
Query: 703 DLKQNDLSVSAYLSKDKVLYTDMEAS 780
++ + SVS Y+SK K L +M ++
Sbjct: 136 TTQKGESSVSDYISKMKTLADEMASA 161
>AAN04167.1 Putative copia-like retrotransposon polyprotein [Oryza sativa
Japonica Group] AAP53032.1 retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1042
Score = 125 bits (314), Expect(2) = 8e-36
Identities = 90/299 (30%), Positives = 136/299 (45%), Gaps = 26/299 (8%)
Frame = +2
Query: 914 RGRGRGFAQPTQRFTRSGSNFQAWPNYSGSTPRFQACQLCQSNDHIAPQC-PRFVNVEVH 1090
RG GRG QR G+ R C +C H+A C R+ V
Sbjct: 158 RGSGRGRGSSQQR---------------GNDGR-PLCHVCYKRGHVAANCWHRYDEDYVP 201
Query: 1091 LITTTSIHRFQRSPSNIWYPDTGATYHVTPDLAALQSFDEY----------ACTLVTEQV 1240
+ + + WY DTGAT H+T L L + + Y + + +
Sbjct: 202 DDKLVAAATYSHGADSNWYVDTGATDHITSQLEKLNTREVYKGHDQIHTASGAGMKIKHI 261
Query: 1241 ------*PNRVFHLTDILHVPEMTKSLLSVQKFCRDNNAIFEFSDSGFLIKDKPTQRIIL 1402
P R HL ++LHVP+ K+L+S K DN+ E FLIKD+ T+ +L
Sbjct: 262 GHAIVHTPTRPLHLNNVLHVPQAAKNLISATKLASDNSVFVEIHSKYFLIKDRTTRSTVL 321
Query: 1403 TGLASNGHY-----SFQPAAYSASASSKVWHHRLGHPHSRVLQQVISRHRLGVFSKFD-- 1561
G +G Y S A++ + S + WH RLGHP ++ +VIS ++L + +
Sbjct: 322 KGPRRHGLYPLPSTSSTKQAFAVAPSLERWHSRLGHPSIPIVMKVISSNKLPCLRESNKE 381
Query: 1562 --CFSCPLGKACRQSFSASPNKSSRVLNLIFTDVWGRAPKLSFDGMRFYVLFVVDFRCF 1732
C +C K+ + +S S + S++ L LI++DVWG A SF G +FYV F+ +R F
Sbjct: 382 SVCDACQKAKSHQLPYSNSMSVSNKPLELIYSDVWGPA-STSFGGKKFYVSFIDSYRKF 439
Score = 55.8 bits (133), Expect(2) = 8e-36
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = +3
Query: 1737 WLFPIASKSDVYSTFIHFQKLVERQFSTKIKSVQSDWGGEFRPLHKYF 1880
W++ + KSDV+ F FQ+LVER F KI ++Q+DWGGE++ L+ +F
Sbjct: 441 WIYFLKHKSDVFEKFHDFQQLVERLFDRKIIAMQTDWGGEYQKLNSFF 488
>AAC61290.1 putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1149
Score = 125 bits (315), Expect(2) = 1e-34
Identities = 92/305 (30%), Positives = 139/305 (45%), Gaps = 36/305 (11%)
Frame = +2
Query: 908 NSRGRGRGFAQPTQRFTRSGSNFQAWPNYSGSTPRFQA-----CQLCQSNDHIAPQC--- 1063
++RGRG + F+ G FQ +S S+ A CQ+C H A QC
Sbjct: 228 SNRGRGGRNNRGKGNFSTRGRGFQQ--QFSSSSSSVSASEKPMCQICGKRGHYALQCWHR 285
Query: 1064 --PRFVNVEVHLITTTSIHRFQRSPSNIWYPDTGATYHVTPDLAALQSFDEYAC--TLVT 1231
+ + E +++H S + W PD+ AT H+T + + LQ Y T++
Sbjct: 286 FDDSYQHSEAAAAAFSALHITDVSDDSGWVPDSAATAHITNNSSRLQQMQPYLGNDTVMA 345
Query: 1232 EQV*PNRVFH--------------LTDILHVPEMTKSLLSVQKFCRDNNAIFEFSDSGFL 1369
+ H L D+L P + KSLLSV K +D F F G L
Sbjct: 346 SDGNFLPITHIGSANLPSTSGNLPLKDVLVCPNIAKSLLSVSKLTKDYPCSFTFDADGVL 405
Query: 1370 IKDKPTQRIILTGLA-SNGHYSFQPAAYS-------ASASSKVWHHRLGHPHSRVLQQVI 1525
+KDK T +++ G + S G Y + + A+ +VWH RLGHP+ +VLQ +
Sbjct: 406 VKDKATCKVLTKGSSTSEGLYKLENPKFQMFYSTRQVKATDEVWHMRLGHPNPQVLQLLA 465
Query: 1526 SRHRLGVFSKFD--CFSCPLGKACRQSFSASPNKSSRVLNLIFTDVWGRAPKLSFDGMRF 1699
++ + + C SC LGK+ R F AS +SR L + D+WG AP S G ++
Sbjct: 466 NKKAIQINKSTSKMCESCRLGKSSRLPFIASDFIASRPLERVHCDLWGPAPVSSIQGFQY 525
Query: 1700 YVLFV 1714
YV+F+
Sbjct: 526 YVIFI 530
Score = 51.6 bits (122), Expect(2) = 1e-34
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +3
Query: 1695 GFMFYLLLILGAS--IWLFPIASKSDVYSTFIHFQKLVERQFSTKIKSVQSDWGGEF 1859
GF +Y++ I S W +P+ KSD S F+ FQ VE TKI + QSD GGEF
Sbjct: 522 GFQYYVIFIDNRSRFCWFYPLKHKSDFCSLFMKFQSFVENLLQTKIGTFQSDGGGEF 578
>ABG00000.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2074
Score = 117 bits (293), Expect(2) = 2e-34
Identities = 93/308 (30%), Positives = 137/308 (44%), Gaps = 32/308 (10%)
Frame = +2
Query: 905 FNSRGRGRGFAQPTQRFTRSGSNFQAWPNYSGSTPRFQACQLCQSNDHIAPQCPRFVNVE 1084
F RG GRG R G+ F P CQLC H+ C +
Sbjct: 1211 FRGRGGGRGDRGGRGRGNGGGARFSNKPR--------STCQLCGKIGHVVADCWYRYDEN 1262
Query: 1085 VHLITTTSIHRFQRSPSNIWYPDTGATYHVTPDLAALQSFDEY----------ACTLVTE 1234
+ T+ +N WY DTGAT H+T +L L + ++Y + +
Sbjct: 1263 FIPDSKTAAAASYGVDTN-WYMDTGATDHITGELDKLTTHEKYNGKEQIHTASGAGMDIK 1321
Query: 1235 QV*PNRVFH-------LTDILHVPEMTKSLLSVQKFCRDNNAIFEFSDSGFLIKDKPTQR 1393
V + + H L +ILHVP+ K+L+S + DN+A E F IKD+ T+
Sbjct: 1322 HV-GHSIIHTPICNIQLKNILHVPKAEKNLISAHRLAVDNHAFVEVHPRFFAIKDQVTKN 1380
Query: 1394 IILTGLASNGHYSFQPAAYSASASSKV-----------WHHRLGHPHSRVLQQVISRHRL 1540
++L G NG Y P S+ A+SK WH RLGHP ++Q+V+S + L
Sbjct: 1381 LLLRGPCRNGLY---PLPTSSLATSKQVLGAIKPTMSRWHSRLGHPSLAIVQKVVSSNNL 1437
Query: 1541 GVFSKFD----CFSCPLGKACRQSFSASPNKSSRVLNLIFTDVWGRAPKLSFDGMRFYVL 1708
+ C +C K+ + + S + S+ L L+F+DVWG AP S G ++YV
Sbjct: 1438 PCLGDVNESGVCNACQQAKSHQLPYPKSFSVSNNPLELVFSDVWGPAP-TSVGGRKYYVS 1496
Query: 1709 FVVDFRCF 1732
F+ DF F
Sbjct: 1497 FIDDFSKF 1504
Score = 58.9 bits (141), Expect(2) = 2e-34
Identities = 24/51 (47%), Positives = 37/51 (72%)
Frame = +3
Query: 1737 WLFPIASKSDVYSTFIHFQKLVERQFSTKIKSVQSDWGGEFRPLHKYFTDL 1889
W++ + SK++V+ F FQ+ VER F+ KI S+Q+DWGGE+ LH +FT +
Sbjct: 1506 WIYLLKSKAEVFLKFQEFQQRVERLFNRKIISMQTDWGGEYEKLHSFFTKI 1556
>OMO75820.1 Integrase, catalytic core [Corchorus capsularis]
Length = 1430
Score = 117 bits (293), Expect(2) = 2e-34
Identities = 93/307 (30%), Positives = 129/307 (42%), Gaps = 38/307 (12%)
Frame = +2
Query: 908 NSRGRGRGFAQPTQRFTRSGSNFQAWPNYSGS-TPRFQACQLCQSNDHIAPQCPRF---- 1072
N R GRG +F+R+ + Y + + CQ C H A C +
Sbjct: 442 NFRSIGRG------QFSRTATTHSGTQRYHQNFNSKRMFCQYCDKPGHTAKMCYQIRPKD 495
Query: 1073 -VNVEVHLITTTSIHRFQRSPSNIWYPDTGATYHVTPDLAALQSFDEYAC---------- 1219
+ + HL TT S W D+GA +HVT L LQ EY C
Sbjct: 496 QIALAAHLSTTQS--------PQTWIVDSGANHHVTNKLQNLQIAQEYDCPDSLLVGDGT 547
Query: 1220 ---------TLVTEQV*PNRVFHLTDILHVPEMTKSLLSVQKFCRDNNAIFEFSDSGFLI 1372
TL+ L ++L VP+ +L+SV + NN EF F++
Sbjct: 548 GLSISHTGSTLIKPST---HSLSLQNVLCVPKSKSNLVSVSQLTEANNVSVEFFSKNFMV 604
Query: 1373 KDKPTQRIILTGLASNGHYSFQP----------AAYSASASSKVWHHRLGHPHSRVLQQV 1522
KD T+ + GL G Y F A +S + WH RLGHP+S VLQ V
Sbjct: 605 KDLHTKEPVAHGLNRGGLYYFTNHPPVIDTQALALVGVKSSLETWHQRLGHPNSHVLQSV 664
Query: 1523 ISRHRL--GVFSKFD-CFSCPLGKACRQSFSASPNKSSRVLNLIFTDVWGRAPKLSFDGM 1693
+ L F +F C +C K+ R FS+S S L++I+TDVWG A +S G
Sbjct: 665 LKSFSLPCSSFKQFSSCNACYCNKSHRLPFSSSSIVSRGPLDVIYTDVWGPAQIISTQGF 724
Query: 1694 RFYVLFV 1714
++YV FV
Sbjct: 725 KYYVAFV 731
Score = 58.9 bits (141), Expect(2) = 2e-34
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +3
Query: 1695 GFMFYLLLI--LGASIWLFPIASKSDVYSTFIHFQKLVERQFSTKIKSVQSDWGGEFRPL 1868
GF +Y+ + W +PI KSDV+ F FQKLVE F TKI ++ SD GGEF L
Sbjct: 723 GFKYYVAFVDLYTRYTWFYPIKLKSDVFVLFPKFQKLVENYFKTKIVTIFSDCGGEFEKL 782
Query: 1869 HKYFTDL 1889
+F++L
Sbjct: 783 KHFFSNL 789
>AAT85031.1 putative polyprotein [Oryza sativa Japonica Group] ABF96679.1
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1437
Score = 117 bits (292), Expect(2) = 7e-34
Identities = 97/310 (31%), Positives = 130/310 (41%), Gaps = 35/310 (11%)
Frame = +2
Query: 908 NSRGRGRGFAQPTQRFTRSGSNFQAWPNYSGSTPRFQACQLCQSNDHIAPQC-----PRF 1072
N RGRG P SG N G T CQLC H C F
Sbjct: 251 NGANRGRGRGNP------SGGR----ANVGGGTDNRPKCQLCYKRGHTVCDCWYRYDENF 300
Query: 1073 VNVEVHLITTTSIHRFQRSPSNIWYPDTGATYHVTPDLAALQSFDEY------------- 1213
V E T S WY DTGAT HVT +L L D+Y
Sbjct: 301 VPDERFAGTAVSY-----GVDTNWYLDTGATDHVTGELDKLTVRDKYHGNDQVHTASGAG 355
Query: 1214 -ACTLVTEQV*--PNRVFHLTDILHVPEMTKSLLSVQKFCRDNNAIFEFSDSGFLIKDKP 1384
+ + V P+R HL D+L+VP+ K+L+S K DN A E F IKD
Sbjct: 356 MEISHIGNSVVKTPSRNLHLKDVLYVPKANKNLVSAYKLTSDNLAFIELYRKFFFIKDLA 415
Query: 1385 TQRIILTGLASNGHYSF-QPAAYS---------ASASSKVWHHRLGHPHSRVLQQVISRH 1534
+R +L G G Y+ P+++ S + WH RLGHP V+++VI
Sbjct: 416 MRRTLLRGRCHKGLYALPSPSSHHHQVKQVYGVTKPSFERWHSRLGHPSYTVVEKVIKSQ 475
Query: 1535 RLGVFSKFD----CFSCPLGKACRQSFSASPNKSSRVLNLIFTDVWGRAPKLSFDGMRFY 1702
L + C +C K+ + SF S ++S L L+F+DVWG AP+ S ++Y
Sbjct: 476 NLPCLDVSEQVSVCDACQKAKSHQLSFPKSTSESKYPLELVFSDVWGPAPQ-SVGNNKYY 534
Query: 1703 VLFVVDFRCF 1732
V F+ D+ F
Sbjct: 535 VSFIDDYSKF 544
Score = 57.8 bits (138), Expect(2) = 7e-34
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = +3
Query: 1737 WLFPIASKSDVYSTFIHFQKLVERQFSTKIKSVQSDWGGEFRPLHKYF 1880
W++ + KS+V+ F FQ LVER F+ KI ++Q+DWGGE++ LH +F
Sbjct: 546 WIYLLKYKSEVFDKFHEFQSLVERLFNRKIVAMQTDWGGEYQKLHSFF 593
Score = 62.4 bits (150), Expect = 2e-06
Identities = 35/141 (24%), Positives = 70/141 (49%), Gaps = 13/141 (9%)
Frame = +1
Query: 394 ISLKLTDHNHSFWKK*IVPFSKGQNLYHHVDGSIPPPSP-------------TSSDFAAW 534
+S KL NH+ WK I+ +G L H+ G PP+P ++ ++ W
Sbjct: 18 VSEKLGKSNHAVWKAQILATIRGARLEGHLTGDDQPPAPILRRKEGEKEVVVSNPEYEEW 77
Query: 535 YQRDQCVLSMIISSLTEEVMLIPMSHDSAWDFWLALERTLASDYLTRSLQLHAALHDLKQ 714
DQ VL+ ++SS+T+++++ + +A W ++ S R++ +L L++
Sbjct: 78 VATDQQVLAYLLSSMTKDLLVQVATCRTAASAWSMIQGMFGSMTRARTINTRLSLSTLQK 137
Query: 715 NDLSVSAYLSKDKVLYTDMEA 777
D++++ Y+ K + L D+ A
Sbjct: 138 GDMNITTYVGKMRALADDLMA 158
>XP_018853333.1 PREDICTED: uncharacterized protein LOC109015311, partial [Juglans
regia]
Length = 525
Score = 145 bits (367), Expect = 9e-34
Identities = 100/296 (33%), Positives = 144/296 (48%), Gaps = 40/296 (13%)
Frame = +2
Query: 914 RGRGRGFAQPTQRFTRSGSNFQAWPNYSGSTPRFQACQLCQSNDHIAPQCPRFVNVEVHL 1093
RGRGR + R RS S+ Q NY+ P CQ+C + H+A QC +
Sbjct: 242 RGRGRSNSWNNSR-GRSNSSQQ---NYNNQRP---TCQVCNKSGHVALQCRYRFDHAYQY 294
Query: 1094 ITTTSIHRFQRSPSNI----WYPDTGATYHVTPDLAAL---------------------- 1195
+S +PS++ WYPD+GAT+H+T +L+ L
Sbjct: 295 KAPSSFSANYTAPSSVSDSSWYPDSGATHHLTNELSNLNISSAPYTGSDSIHVGDGTSIP 354
Query: 1196 -QSF-DEYACTLVTEQV*PNRVFHLTDILHVPEMTKSLLSVQKFCRDNNAIFEFSDSGFL 1369
Q+F D Y T N FHL ++LHVP +TK+L+SV +FC DN+ FEF S F
Sbjct: 355 IQNFGDSYLST-------HNSSFHLRNLLHVPAITKNLVSVLRFCVDNSCYFEFHSSHFS 407
Query: 1370 IKDKPTQRIILTGLASNGHYSFQPAAYSASASSK---------VWHHRLGHPHSRVLQQV 1522
+KD T++++LTG NG Y F + S ++ S WH RLGHP ++ ++
Sbjct: 408 VKDTQTKKVLLTGPTHNGLYIFPTLSQSTTSPSSHLGERTSPGQWHQRLGHPSLGLVSRI 467
Query: 1523 ISRHRLGVFSK---FDCFSCPLGKACRQSFSASPNKSSRVLNLIFTDVWGRAPKLS 1681
+ ++ L S F C CP+ KA + FS S ++ L L+ DVWG AP S
Sbjct: 468 LRQYCLPTSSSDSTFFCNECPIAKAHQLPFSVSRTVYTKPLQLLCADVWGPAPHTS 523
Score = 74.3 bits (181), Expect = 3e-10
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 11/136 (8%)
Frame = +1
Query: 385 NHSISLKLTDHNHSFWKK*IVPFSKGQNLYHHVDGSI--PPPSPTSS---------DFAA 531
+H ++ KLT+ N WK I + +GQ+L+ HVDGS+ PP + T S DF +
Sbjct: 17 SHIVTTKLTNDNFLLWKVQISAYLRGQSLFGHVDGSLSSPPKNLTDSSTSQPKPNPDFTS 76
Query: 532 WYQRDQCVLSMIISSLTEEVMLIPMSHDSAWDFWLALERTLASDYLTRSLQLHAALHDLK 711
W + DQ VLS++ SSL++ ++ +S +A W ++ S + Q+ L +L
Sbjct: 77 WQRTDQLVLSVLFSSLSDSILGHVLSSTTAHSLWSSVVSMFDSHSHAKEFQIRFQLTNLS 136
Query: 712 QNDLSVSAYLSKDKVL 759
+ D ++S Y K + L
Sbjct: 137 KGDQTISDYFGKVRSL 152
>AAU43956.1 unknown protein [Oryza sativa Japonica Group] AAU44069.1 putative
polyprotein [Oryza sativa Japonica Group]
Length = 1447
Score = 114 bits (284), Expect(2) = 9e-34
Identities = 98/314 (31%), Positives = 139/314 (44%), Gaps = 42/314 (13%)
Frame = +2
Query: 917 GRGRGFAQP-TQRFTRSGSNFQAWPNYSGSTPRFQACQLCQSNDHIAPQC-----PRFVN 1078
GRGRG R G+N A P G CQLC H C FV
Sbjct: 245 GRGRGGNNNGANRGRGRGNNGGARP--PGGVDNRPKCQLCYKRGHTVINCWYRYDEDFVP 302
Query: 1079 VEVHLITTTSIHRFQRSPSNIWYPDTGATYHVTPDLAALQSFDEYA-------------- 1216
E + + TS WY DT AT HVT +L L D Y
Sbjct: 303 DEKYAGSATSY-----GIDTNWYVDTSATDHVTGELDKLTVRDRYKGQDQVHTASGAGME 357
Query: 1217 ------CTLVTEQV*PNRVFHLTDILHVPEMTKSLLSVQKFCRDNNAIFEFSDSGFLIKD 1378
T+ T PNR HL +IL+VP K+L+S + DN+A E F +KD
Sbjct: 358 ISHIGHSTVRT----PNRDIHLRNILYVPNANKNLVSANRLVSDNSAYMELYSKYFNLKD 413
Query: 1379 KPTQRIILTG---------LASNGHYSFQPAAYSASA---SSKVWHHRLGHPHSRVLQQV 1522
T++++ G +S+ H +P + A S + WH RLGHP S ++++V
Sbjct: 414 LATKKLLFRGPCRGRLYALPSSSPHERPRPLKEAFGAIKPSFERWHSRLGHPASPIVEKV 473
Query: 1523 ISRHRLGVFSKFD----CFSCPLGKACRQSFSASPNKSSRVLNLIFTDVWGRAPKLSFDG 1690
IS++ L ++ + C +C GK+ + +S S + SS L LI++DVWG A S G
Sbjct: 474 ISKNNLPCLAESNKQSVCDACQQGKSHQLPYSRSSSMSSHPLELIYSDVWGPA-LTSVGG 532
Query: 1691 MRFYVLFVVDFRCF 1732
++YV F+ D+ F
Sbjct: 533 KQYYVSFIGDYSKF 546
Score = 60.5 bits (145), Expect(2) = 9e-34
Identities = 27/51 (52%), Positives = 35/51 (68%)
Frame = +3
Query: 1737 WLFPIASKSDVYSTFIHFQKLVERQFSTKIKSVQSDWGGEFRPLHKYFTDL 1889
WL+ I KS+V F FQ LVER F+ KI ++QSDWGGE+ LH +FT +
Sbjct: 548 WLYLIKHKSEVIQKFHEFQALVERLFNRKIIAMQSDWGGEYEKLHSFFTKI 598
Score = 60.5 bits (145), Expect = 9e-06
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 16/147 (10%)
Frame = +1
Query: 388 HSISLKLTDHNHSFWKK*IVPFSKGQNLYHHVDGSIPPPSP----------------TSS 519
++IS KL+ NH+ WK ++ +G L H+ G+ P+ +
Sbjct: 16 NAISEKLSKSNHALWKAQVMAAVRGARLEGHLTGATKTPNALITTTAGDKGEKEVTVRNP 75
Query: 520 DFAAWYQRDQCVLSMIISSLTEEVMLIPMSHDSAWDFWLALERTLASDYLTRSLQLHAAL 699
+F W DQ VL ++S+L +V+ + +A W LE +S R + AL
Sbjct: 76 EFDDWVATDQQVLGFLLSTLARDVLAQVATCGTAAAAWQMLEEMYSSVTRARFINTRIAL 135
Query: 700 HDLKQNDLSVSAYLSKDKVLYTDMEAS 780
+ K+ LS++ Y+SK K L +M A+
Sbjct: 136 SNTKKGTLSINEYVSKMKALADEMTAA 162
>CAN63649.1 hypothetical protein VITISV_037657 [Vitis vinifera]
Length = 1131
Score = 125 bits (314), Expect(2) = 9e-34
Identities = 96/346 (27%), Positives = 146/346 (42%), Gaps = 65/346 (18%)
Frame = +2
Query: 914 RGRGRGFAQPTQRFTRSGSNFQAWP----------------NYSGSTPRFQACQLCQSND 1045
RGRGRG + +G NF P N SG + CQ+C
Sbjct: 210 RGRGRG------HYNNNGGNFGHGPGRGSFNNHSYSSRNFNNVSGGSNGKPQCQVCGKYG 263
Query: 1046 HIAPQCPRFVNVEVHLITTTSIHRFQRSPSNI----WYPDTGATYHVTPDLAALQSFDEY 1213
HIA C + + +PS + WY DTGAT+H+TP+L L S +
Sbjct: 264 HIAINCYHRFDQTYQPTMNNHLAAMVATPSTVGDESWYMDTGATHHLTPNLNKLNSHTPF 323
Query: 1214 ACTLVTEQV*PNRV----------------FHLTDILHVPEMTKSLLSVQKFCRDNNAIF 1345
A + NR+ +L +ILHVP++T +L+SV + C DNN
Sbjct: 324 AGSDKVMVGNGNRLNISNIGHSTISSVSRSLNLKNILHVPQLTTNLISVNRLCTDNNVTV 383
Query: 1346 EFSDSGFLIKDKPTQRIILTGLASNGHYSFQPAAYS------------------------ 1453
EF +GF++KD+ +++ +L G + G Y + S
Sbjct: 384 EFFTNGFVVKDQASKKALLQGNLNYGLYKLSSSTPSRRYQDPDDNKLAGRTSLTTEVPCM 443
Query: 1454 -----ASASSKVWHHRLGHPHSRVLQQVISRHRLGVFSKFDCFSCPLGKACRQSFSASPN 1618
S + +WH RLGHP +RV C C + K+ R F+ S +
Sbjct: 444 SSTLQLSNKADLWHFRLGHP-ARV-----------------CEPCQMAKSHRLPFTLSES 485
Query: 1619 KSSRVLNLIFTDVWGRAPKLSFDGMRFYVLFVVDFRCFHLAFSYCF 1756
++S+ L+ +D+WG AP + +G R++VLFV D H FS+ +
Sbjct: 486 RASQPFALVHSDLWGPAPVVGTNGARYFVLFVDD----HTRFSWLY 527
Score = 48.9 bits (115), Expect(2) = 9e-34
Identities = 18/42 (42%), Positives = 30/42 (71%)
Frame = +3
Query: 1737 WLFPIASKSDVYSTFIHFQKLVERQFSTKIKSVQSDWGGEFR 1862
WL+ +A K S F+ F+ ++E QF TK++ +Q++WGGEF+
Sbjct: 525 WLYLLAFKDQAISGFLQFKVMIETQFDTKVRMLQTNWGGEFQ 566
>CAN68489.1 hypothetical protein VITISV_037543 [Vitis vinifera]
Length = 1449
Score = 122 bits (306), Expect(2) = 2e-33
Identities = 92/326 (28%), Positives = 141/326 (43%), Gaps = 52/326 (15%)
Frame = +2
Query: 911 SRGRGRGFAQPTQRFTRSGSNFQAWPNYSGSTPRFQACQLCQSNDHIAPQC-PRF----- 1072
S G+ R T+R T G S S+ CQLC H +C RF
Sbjct: 292 SSGQNRQSGFNTRRGTNGGR--------SQSSQHRPQCQLCGKFGHTVVRCYHRFDINFQ 343
Query: 1073 -VNVEVHLITTTS------IHRFQRSPSNI----WYPDTGATYHVTPDLAALQSFDEYAC 1219
N + + T + SPS I W+ DTGAT+H++ + L Y
Sbjct: 344 GYNPNMDTVQTNKPNAKNQVQAMMASPSTISDEAWFFDTGATHHLSQSIDPLSDVQPYMG 403
Query: 1220 ----------------TLVTEQV*PNRVFHLTDILHVPEMTKSLLSVQKFCRDNNAIFEF 1351
T T ++ F L +LHVP++ +L+SV +FC DNN FEF
Sbjct: 404 NDKVIVGNGKHLRILHTGTTFFPSSSKTFQLRQVLHVPDIATNLISVSQFCADNNTFFEF 463
Query: 1352 SDSGFLIKDKPTQRIILTGLASNGHYSF------QPAAY-----------SASASSKVWH 1480
F +KD+ T++I+L G +G Y F PAA+ S + ++ +WH
Sbjct: 464 HPRFFFVKDQVTKKILLQGSLEHGLYRFPARFVPSPAAFVSSSYDRSSNLSLTTTTTLWH 523
Query: 1481 HRLGHPHSRVLQQVISRHRLG--VFSKFDCFSCPLGKACRQSFSASPNKSSRVLNLIFTD 1654
RLGHP +L+ +++ + C +C K+ + F+ +++S L L+ D
Sbjct: 524 SRLGHPADNILKHILTSCNISHQCHKNNVCCACQFAKSHKLPFNVXVSRASHPLALLHAD 583
Query: 1655 VWGRAPKLSFDGMRFYVLFVVDFRCF 1732
+WG S G R+++LFV DF F
Sbjct: 584 LWGPXSIPSTTGARYFILFVDDFSRF 609
Score = 51.2 bits (121), Expect(2) = 2e-33
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +3
Query: 1737 WLFPIASKSDVYSTFIHFQKLVERQFSTKIKSVQSDWGGEFRPLHKY 1877
W++P+ SK S FI F+ LVE QF+++I+ ++SD GGEF+ Y
Sbjct: 611 WIYPLHSKDQALSVFIKFKSLVENQFNSRIQCLRSDNGGEFKAFSSY 657
Score = 65.1 bits (157), Expect = 4e-07
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 6/137 (4%)
Frame = +1
Query: 385 NHSISLKLTDHNHSFWKK*IVPFSKGQNLYHHVDG-SIPPPSPTSS-----DFAAWYQRD 546
NH++ +KL +N+ W+ + H++G I PP TSS DF W + D
Sbjct: 94 NHALPIKLDRNNYILWRTQMENVVFANGFEDHIEGLKICPPQKTSSGETNPDFVMWRRFD 153
Query: 547 QCVLSMIISSLTEEVMLIPMSHDSAWDFWLALERTLASDYLTRSLQLHAALHDLKQNDLS 726
+ +LS I SSLT E+M + + S+ W ALE + R +QL ++ L+
Sbjct: 154 RMILSWIYSSLTPEIMGQIVGYQSSHAXWFALEXXFXASSRARVMQLRLEFQTTRKGSLT 213
Query: 727 VSAYLSKDKVLYTDMEA 777
+ Y+ K K L ++ A
Sbjct: 214 MMEYILKLKSLADNLAA 230
>ACY72569.1 unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 116 bits (290), Expect(2) = 8e-33
Identities = 88/296 (29%), Positives = 134/296 (45%), Gaps = 38/296 (12%)
Frame = +2
Query: 959 RSGSNFQAWPNYSGSTPRFQACQLCQSNDHIAPQC-----PRFVNVEVHLITTTSIHRFQ 1123
RSG + G R CQ+C H A C +V E T+ +
Sbjct: 260 RSGGQARGRGRGLGGQDRRPTCQVCFKRGHTAADCWYRFDEDYVADEKLAAAATNSYGID 319
Query: 1124 RSPSNIWYPDTGATYHVTPDLAALQSFDEYACTLVTEQV-------------------*P 1246
+ WY DTGAT H+T +L L + ++Y EQ+ P
Sbjct: 320 TN----WYIDTGATDHITGELEKLTTKEKYN---GNEQIHTASGAGMDISHIGHTTVHTP 372
Query: 1247 NRVFHLTDILHVPEMTKSLLSVQKFCRDNNAIFEFSDSGFLIKDKPTQRIILTGLASNGH 1426
+R HL ++L+VP+ KSL+S + DN+A E F IKD+ T+ I+L G +G
Sbjct: 373 SRNIHLNNVLYVPQAKKSLISASQLATDNSAFLELHSKFFSIKDQVTKDILLEGRCRHGL 432
Query: 1427 YSFQPAAYSASASSKV----------WHHRLGHPHSRVLQQVISRHRLGV----FSKFDC 1564
Y P ++ + S + WH RLGHP +++QVIS++ L ++ C
Sbjct: 433 YPI-PKSFGRTTSKQALGTTKLSLSRWHSRLGHPSLPIVKQVISKNNLPCSVESVNQSVC 491
Query: 1565 FSCPLGKACRQSFSASPNKSSRVLNLIFTDVWGRAPKLSFDGMRFYVLFVVDFRCF 1732
+C K+ + + S + S L L+F+DVWG AP+ S ++YV F+ DF F
Sbjct: 492 NACQEAKSRQLPYVRSTSVSQFPLELVFSDVWGPAPE-SVGRNKYYVSFIDDFSKF 546
Score = 55.1 bits (131), Expect(2) = 8e-33
Identities = 22/51 (43%), Positives = 35/51 (68%)
Frame = +3
Query: 1737 WLFPIASKSDVYSTFIHFQKLVERQFSTKIKSVQSDWGGEFRPLHKYFTDL 1889
W++ + KS+V+ F FQ LVER F KI ++Q+DWGGE++ L+ +F +
Sbjct: 548 WIYLLKYKSEVFEKFKEFQALVERMFDRKIIAMQTDWGGEYQKLNSFFAKI 598
Score = 62.8 bits (151), Expect = 2e-06
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 13/143 (9%)
Frame = +1
Query: 388 HSISLKLTDHNHSFWKK*IVPFSKGQNLYHHVDGSIPPPSPTSS-------------DFA 528
HS+S KL NH+ WK + +G L H+ G++ P S F
Sbjct: 18 HSVSEKLGKGNHALWKAQVSAAVRGARLQGHLTGAVKAPDAELSVTIDGKTTTKPNPAFE 77
Query: 529 AWYQRDQCVLSMIISSLTEEVMLIPMSHDSAWDFWLALERTLASDYLTRSLQLHAALHDL 708
W DQ VL ++SSL+ +V++ + +A + W A+E ++ R++ AL +
Sbjct: 78 DWDANDQLVLGYLLSSLSRDVLIQVATCKTAAEAWRAIEGLYSTGTRARAVNTRLALTNT 137
Query: 709 KQNDLSVSAYLSKDKVLYTDMEA 777
K+ + ++ Y++K + L +M A
Sbjct: 138 KKGTMKIAEYVAKMRALGDEMAA 160
>BAA78426.1 polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 119 bits (298), Expect(2) = 1e-32
Identities = 100/330 (30%), Positives = 139/330 (42%), Gaps = 58/330 (17%)
Frame = +2
Query: 908 NSRGRGRGFAQPTQRFTRSGSNFQAW-PNYSGST-------PRFQACQLCQSNDHIAPQC 1063
N+RG R + R SN +W P+ SGS P CQ+C H A +C
Sbjct: 238 NNRGDNRNYNNNNNR-----SN--SWQPSSSGSRSDNRQPKPYLGRCQICSVQGHSAKRC 290
Query: 1064 PRFVNVEVHLITTTSIHRFQRSPSNIWYP-----------------DTGATYHVTPDLAA 1192
P ++H +T+ + SP W P D+GAT+H+T D
Sbjct: 291 P-----QLHQFQSTTNQQQSTSPFTPWQPRANLAVNSPYNANNWLLDSGATHHITSDFNN 345
Query: 1193 LQSFDEY--------------------ACTLVTEQV*PNRVFHLTDILHVPEMTKSLLSV 1312
L Y + +L T +R L +L+VP + K+L+SV
Sbjct: 346 LSFHQPYTGGDDVMIADGSTIPITHTGSASLPTS----SRSLDLNKVLYVPNINKNLISV 401
Query: 1313 QKFCRDNNAIFEFSDSGFLIKDKPTQRIILTGLASNGHY-----SFQPAAYSASASSKV- 1474
+ C N EF + F +KD T +L G + Y S Q + AS SK
Sbjct: 402 YRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKAT 461
Query: 1475 ---WHHRLGHPHSRVLQQVISRHRLGVFSK----FDCFSCPLGKACRQSFSASPNKSSRV 1633
WH RLGHP +L VIS H L V + C C + K+ + FS S SS+
Sbjct: 462 HSSWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKP 521
Query: 1634 LNLIFTDVWGRAPKLSFDGMRFYVLFVVDF 1723
L I++DVW +P LS D R+YV+FV F
Sbjct: 522 LEYIYSDVWS-SPILSIDNYRYYVIFVDHF 550
Score = 51.2 bits (121), Expect(2) = 1e-32
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +3
Query: 1737 WLFPIASKSDVYSTFIHFQKLVERQFSTKIKSVQSDWGGEFRPLHKYFT 1883
WL+P+ KS V TFI F+ LVE +F T+I ++ SD GGEF L Y +
Sbjct: 555 WLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRDYLS 603
>BAM42649.1 Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 119 bits (298), Expect(2) = 1e-32
Identities = 100/330 (30%), Positives = 139/330 (42%), Gaps = 58/330 (17%)
Frame = +2
Query: 908 NSRGRGRGFAQPTQRFTRSGSNFQAW-PNYSGST-------PRFQACQLCQSNDHIAPQC 1063
N+RG R + R SN +W P+ SGS P CQ+C H A +C
Sbjct: 238 NNRGDNRNYNNNNNR-----SN--SWQPSSSGSRSDNRQPKPYLGRCQICSVQGHSAKRC 290
Query: 1064 PRFVNVEVHLITTTSIHRFQRSPSNIWYP-----------------DTGATYHVTPDLAA 1192
P ++H +T+ + SP W P D+GAT+H+T D
Sbjct: 291 P-----QLHQFQSTTNQQQSTSPFTPWQPRANLAVNSPYNANNWLLDSGATHHITSDFNN 345
Query: 1193 LQSFDEY--------------------ACTLVTEQV*PNRVFHLTDILHVPEMTKSLLSV 1312
L Y + +L T +R L +L+VP + K+L+SV
Sbjct: 346 LSFHQPYTGGDDVMIADGSTIPITHTGSASLPTS----SRSLDLNKVLYVPNINKNLISV 401
Query: 1313 QKFCRDNNAIFEFSDSGFLIKDKPTQRIILTGLASNGHY-----SFQPAAYSASASSKV- 1474
+ C N EF + F +KD T +L G + Y S Q + AS SK
Sbjct: 402 YRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKAT 461
Query: 1475 ---WHHRLGHPHSRVLQQVISRHRLGVFSK----FDCFSCPLGKACRQSFSASPNKSSRV 1633
WH RLGHP +L VIS H L V + C C + K+ + FS S SS+
Sbjct: 462 HSSWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKP 521
Query: 1634 LNLIFTDVWGRAPKLSFDGMRFYVLFVVDF 1723
L I++DVW +P LS D R+YV+FV F
Sbjct: 522 LEYIYSDVWS-SPILSIDNYRYYVIFVDHF 550
Score = 51.2 bits (121), Expect(2) = 1e-32
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +3
Query: 1737 WLFPIASKSDVYSTFIHFQKLVERQFSTKIKSVQSDWGGEFRPLHKYFT 1883
WL+P+ KS V TFI F+ LVE +F T+I ++ SD GGEF L Y +
Sbjct: 555 WLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRDYLS 603