BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00024422
         (296 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017220317.1 PREDICTED: pentatricopeptide repeat-containing pr...    69   1e-11
GAU16729.1 hypothetical protein TSUD_199710 [Trifolium subterran...    64   8e-10
XP_012836548.1 PREDICTED: pentatricopeptide repeat-containing pr...    62   3e-09
XP_012840076.1 PREDICTED: pentatricopeptide repeat-containing pr...    62   3e-09
XP_016581943.1 PREDICTED: pentatricopeptide repeat-containing pr...    62   4e-09
XP_014506945.1 PREDICTED: pentatricopeptide repeat-containing pr...    61   1e-08
XP_017421044.1 PREDICTED: pentatricopeptide repeat-containing pr...    61   1e-08
XP_003609866.1 PPR containing plant-like protein [Medicago trunc...    61   1e-08
JAU93152.1 Pentatricopeptide repeat-containing protein, chloropl...    60   2e-08
JAU52042.1 Pentatricopeptide repeat-containing protein, chloropl...    60   2e-08
JAU25671.1 Pentatricopeptide repeat-containing protein, chloropl...    60   2e-08
XP_004508090.1 PREDICTED: pentatricopeptide repeat-containing pr...    60   2e-08
XP_009353413.1 PREDICTED: pentatricopeptide repeat-containing pr...    60   3e-08
XP_019455877.1 PREDICTED: pentatricopeptide repeat-containing pr...    59   3e-08
XP_008458291.1 PREDICTED: pentatricopeptide repeat-containing pr...    59   3e-08
XP_008223486.1 PREDICTED: pentatricopeptide repeat-containing pr...    59   5e-08
XP_011071330.1 PREDICTED: pentatricopeptide repeat-containing pr...    59   6e-08
XP_008390371.1 PREDICTED: pentatricopeptide repeat-containing pr...    59   7e-08
XP_015062643.1 PREDICTED: pentatricopeptide repeat-containing pr...    58   9e-08
KHN03285.1 Pentatricopeptide repeat-containing protein, chloropl...    58   9e-08

>XP_017220317.1 PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic [Daucus carota subsp. sativus] KZM85623.1
           hypothetical protein DCAR_026955 [Daucus carota subsp.
           sativus]
          Length = 497

 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 44/116 (37%), Positives = 57/116 (49%), Gaps = 22/116 (18%)
 Frame = +3

Query: 15  ASFSLSFPHPTKSNPIPLSNNNNKI----------------PQSNSKLKVSKKGQFPTLS 146
           +SFSLSF       P P+    + +                P    K +  K+G++P  S
Sbjct: 5   SSFSLSFSSSLLPQPKPIKPKAHSLHPSRARCPPISCAFTAPSETKKKRHWKQGEYPGFS 64

Query: 147 VKETSNFSNQTGNKKIPIKNMVRKNE------VWVNTVTEALSDCIDNKEWLQALE 296
             E+S  S     KK PIKN+ +K +       W NTVTEALSDCID K+WLQALE
Sbjct: 65  --ESSGPSRSVDKKKTPIKNIKKKIDKKKEAKAWANTVTEALSDCIDKKQWLQALE 118


>GAU16729.1 hypothetical protein TSUD_199710 [Trifolium subterraneum]
          Length = 490

 Score = 63.9 bits (154), Expect = 8e-10
 Identities = 49/121 (40%), Positives = 61/121 (50%), Gaps = 24/121 (19%)
 Frame = +3

Query: 6   MAMASFSLSFPHPTKSNPIPLSNNNN---KIP---------------QSNSKLKVSKKGQ 131
           M MAS SL+F     ++PIP    N    K+P                S  K K  KKG+
Sbjct: 1   MDMASVSLTFSSSIVASPIPQHKCNKTQYKVPIFRVIRCAVSPPPSKSSVVKKKHWKKGE 60

Query: 132 FPTLSVKETSNFSNQTGNKKIPIKNMV----RKNEV--WVNTVTEALSDCIDNKEWLQAL 293
           FP         FS   G ++ PIKN+     RKN+   WV+TVTEALS+ ID K+WLQAL
Sbjct: 61  FP--------GFSETPGTRRKPIKNIKKKLDRKNDAKAWVSTVTEALSERIDKKQWLQAL 112

Query: 294 E 296
           E
Sbjct: 113 E 113


>XP_012836548.1 PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Erythranthe guttata] EYU38183.1
           hypothetical protein MIMGU_mgv1a004749mg [Erythranthe
           guttata]
          Length = 512

 Score = 62.4 bits (150), Expect = 3e-09
 Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
 Frame = +3

Query: 69  SNNNNKIPQSNSKLKVSKKGQFPTLSVKETSNFSNQTGNKKIPIKNMVRKNE------VW 230
           +N+++    ++ K K  K G++P L+   TSN    T  K+ PIKN+ +K +       W
Sbjct: 44  TNSSSSTTVNSPKKKHWKVGEYPGLT--HTSNPKFSTNKKRTPIKNIKKKLDRKINANAW 101

Query: 231 VNTVTEALSDCIDNKEWLQALE 296
           VNTVTEALSD ID K+WL+AL+
Sbjct: 102 VNTVTEALSDAIDKKQWLRALQ 123


>XP_012840076.1 PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic [Erythranthe guttata] EYU45462.1
           hypothetical protein MIMGU_mgv1a004651mg [Erythranthe
           guttata]
          Length = 516

 Score = 62.4 bits (150), Expect = 3e-09
 Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
 Frame = +3

Query: 69  SNNNNKIPQSNSKLKVSKKGQFPTLSVKETSNFSNQTGNKKIPIKNMVRKNE------VW 230
           +N+++    ++ K K  K G++P L+   TSN    T  K+ PIKN+ +K +       W
Sbjct: 48  TNSSSSTTVNSPKKKHWKVGEYPGLT--HTSNPKFSTNKKRTPIKNIKKKLDRKSNANAW 105

Query: 231 VNTVTEALSDCIDNKEWLQALE 296
           VNTVTEALSD ID K+WL+AL+
Sbjct: 106 VNTVTEALSDAIDKKQWLRALQ 127


>XP_016581943.1 PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Capsicum annuum]
          Length = 493

 Score = 62.0 bits (149), Expect = 4e-09
 Identities = 32/67 (47%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
 Frame = +3

Query: 102 SKLKVSKKGQFPTLSVKETSNFSNQTGNKKIPIKNMVRKN--EVWVNTVTEALSDCIDNK 275
           SK+K  K+G++P  S    S+ +N+ G +    K + RKN    WVNTV+EALSDCID K
Sbjct: 46  SKMKHWKEGEYPGFSEVSVSHLNNKKGRRTPFKKKIDRKNAGNPWVNTVSEALSDCIDKK 105

Query: 276 EWLQALE 296
           +W QAL+
Sbjct: 106 QWQQALQ 112


>XP_014506945.1 PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic [Vigna radiata var. radiata]
          Length = 493

 Score = 60.8 bits (146), Expect = 1e-08
 Identities = 45/119 (37%), Positives = 59/119 (49%), Gaps = 24/119 (20%)
 Frame = +3

Query: 12  MASFSLSFPHPTKSNPIPLSNNNNKIPQSNSKLKVS------------------KKGQFP 137
           MAS SLSF      + IP  + + KI   +S  +V+                  KKG+FP
Sbjct: 1   MASLSLSFSSSIVPSSIP-HHKSTKIHTQDSTFRVTCFAISSPPSKPVIKKRHWKKGEFP 59

Query: 138 TLSVKETSNFSNQTGNKKIPIKNMVRKNE------VWVNTVTEALSDCIDNKEWLQALE 296
                 TS  S     ++ PIKN+ RK E       WVNTVTE+LS+ ID K+WLQAL+
Sbjct: 60  G-----TSETSVDDSTRRTPIKNIKRKLEKKNSAKAWVNTVTESLSEQIDKKQWLQALQ 113


>XP_017421044.1 PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic [Vigna angularis] KOM33376.1 hypothetical
           protein LR48_Vigan01g293200 [Vigna angularis] BAT76992.1
           hypothetical protein VIGAN_01507000 [Vigna angularis
           var. angularis]
          Length = 493

 Score = 60.8 bits (146), Expect = 1e-08
 Identities = 48/119 (40%), Positives = 63/119 (52%), Gaps = 24/119 (20%)
 Frame = +3

Query: 12  MASFSLSFPHPTKSNPIPLSNNNNKIPQSNSKLKVS------------------KKGQFP 137
           MAS SLSF      + IP  + + KI   +S  +V+                  KKG+FP
Sbjct: 1   MASLSLSFSSSIVPSSIP-HHKSTKIHTQDSTFRVTCFAISSPPSKPVVKKRHWKKGEFP 59

Query: 138 TLSVKETSNFSNQTGNKKIPIKNMVRKNE------VWVNTVTEALSDCIDNKEWLQALE 296
             S  ETS F + T  ++ PIKN+ RK E       WVNTVTE+LS+ ID K+WLQAL+
Sbjct: 60  GTS--ETS-FDDST--RRTPIKNIKRKLEKKNSAKAWVNTVTESLSEQIDKKQWLQALQ 113


>XP_003609866.1 PPR containing plant-like protein [Medicago truncatula] AES92063.1
           PPR containing plant-like protein [Medicago truncatula]
          Length = 496

 Score = 60.8 bits (146), Expect = 1e-08
 Identities = 52/128 (40%), Positives = 66/128 (51%), Gaps = 31/128 (24%)
 Frame = +3

Query: 6   MAMASFSLSFPHPT-KSNPIPLSN----NNNKIPQ-----------------SNS---KL 110
           M MAS SL+F   +   +PIP  N    NN + P                  SNS   K 
Sbjct: 1   MDMASVSLTFSSSSIVPSPIPQHNKTTHNNPRKPHLPIFYAVSSSPSKTASASNSSVVKK 60

Query: 111 KVSKKGQFPTLSVKETSNFSNQTGNKKIPIKNMVRKNE------VWVNTVTEALSDCIDN 272
           K  K+G+FP   V ETS  S+    ++ PIKN+ +K +       W NTVTEALS+CID 
Sbjct: 61  KHWKQGEFP--GVSETSLPSS---TRRKPIKNVKKKLDRKNNAKAWANTVTEALSECIDK 115

Query: 273 KEWLQALE 296
           K+WLQALE
Sbjct: 116 KQWLQALE 123


>JAU93152.1 Pentatricopeptide repeat-containing protein, chloroplastic [Noccaea
           caerulescens]
          Length = 485

 Score = 60.1 bits (144), Expect = 2e-08
 Identities = 42/117 (35%), Positives = 57/117 (48%), Gaps = 22/117 (18%)
 Frame = +3

Query: 12  MASFSLSFPHPTKSNPIPLSNN----------------NNKIPQSNSKLKVSKKGQFPTL 143
           MAS SLSF     S+ IP +                  +   P   +K ++ K+G+FP +
Sbjct: 1   MASMSLSFSSSLCSSRIPEAKRTFHHRDASFVRCVLAASKSSPGGATKKRLWKEGEFPGI 60

Query: 144 SVKETSNFSNQTGNKKIPIKNMVRKNEV------WVNTVTEALSDCIDNKEWLQALE 296
           S          T  ++ PIKN+ +K +       WVNTVTE LSDCI  K+WLQALE
Sbjct: 61  S--------EPTNPRRTPIKNVKKKLDRRSKANGWVNTVTETLSDCIAKKQWLQALE 109


>JAU52042.1 Pentatricopeptide repeat-containing protein, chloroplastic [Noccaea
           caerulescens] JAU62576.1 Pentatricopeptide
           repeat-containing protein, chloroplastic [Noccaea
           caerulescens]
          Length = 485

 Score = 60.1 bits (144), Expect = 2e-08
 Identities = 42/117 (35%), Positives = 57/117 (48%), Gaps = 22/117 (18%)
 Frame = +3

Query: 12  MASFSLSFPHPTKSNPIPLSNN----------------NNKIPQSNSKLKVSKKGQFPTL 143
           MAS SLSF     S+ IP +                  +   P   +K ++ K+G+FP +
Sbjct: 1   MASMSLSFSSSLCSSRIPEAKRTFHHRDASFVRCVLAASKSSPGGATKKRLWKEGEFPGI 60

Query: 144 SVKETSNFSNQTGNKKIPIKNMVRKNEV------WVNTVTEALSDCIDNKEWLQALE 296
           S          T  ++ PIKN+ +K +       WVNTVTE LSDCI  K+WLQALE
Sbjct: 61  S--------EPTNPRRTPIKNVKKKLDRRSKANGWVNTVTETLSDCIAKKQWLQALE 109


>JAU25671.1 Pentatricopeptide repeat-containing protein, chloroplastic [Noccaea
           caerulescens]
          Length = 485

 Score = 60.1 bits (144), Expect = 2e-08
 Identities = 42/117 (35%), Positives = 57/117 (48%), Gaps = 22/117 (18%)
 Frame = +3

Query: 12  MASFSLSFPHPTKSNPIPLSNN----------------NNKIPQSNSKLKVSKKGQFPTL 143
           MAS SLSF     S+ IP +                  +   P   +K ++ K+G+FP +
Sbjct: 1   MASMSLSFSSSLCSSRIPEAKRTFHHRDASFVRCVLAASKSSPGGATKKRLWKEGEFPGI 60

Query: 144 SVKETSNFSNQTGNKKIPIKNMVRKNEV------WVNTVTEALSDCIDNKEWLQALE 296
           S          T  ++ PIKN+ +K +       WVNTVTE LSDCI  K+WLQALE
Sbjct: 61  S--------EPTNPRRTPIKNVKKKLDRRSKANGWVNTVTETLSDCIAKKQWLQALE 109


>XP_004508090.1 PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic [Cicer arietinum]
          Length = 499

 Score = 60.1 bits (144), Expect = 2e-08
 Identities = 51/127 (40%), Positives = 63/127 (49%), Gaps = 32/127 (25%)
 Frame = +3

Query: 12  MASFSLSFPHPTKSNPI-PLSNNNNKIPQ---------------------SNSKLKVSKK 125
           MAS SL+F      +PI P   N  + P+                     SNS   V KK
Sbjct: 1   MASLSLTFSSSIAPSPISPHKFNKTRNPKPKVPIFPITRFAISSPPSASASNSSSVVKKK 60

Query: 126 ----GQFPTLSVKETSNFSNQTGNKKIPIKNMV----RKNEV--WVNTVTEALSDCIDNK 275
               G+FP  S  ETS   +    K+ PIKN+     RKN+   WVNTVTEALS+CID K
Sbjct: 61  HWKQGEFPGFS--ETSLPGS---TKRSPIKNLKKKLDRKNDAKAWVNTVTEALSECIDKK 115

Query: 276 EWLQALE 296
           +WLQAL+
Sbjct: 116 QWLQALQ 122


>XP_009353413.1 PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Pyrus x bretschneideri]
          Length = 633

 Score = 59.7 bits (143), Expect = 3e-08
 Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 6/75 (8%)
 Frame = +3

Query: 90  PQSNSKLKVSKKGQFPTLSVKETSNFSNQTGNKKIPIKNMVRKNE------VWVNTVTEA 251
           P S++K K  K+G+FP   V ETS  +     +K P+KN+ +K +       WVNTVTEA
Sbjct: 137 PSSDNKKKHWKQGEFP--GVSETSIPAIY---RKPPLKNVKKKLDRKNNAKAWVNTVTEA 191

Query: 252 LSDCIDNKEWLQALE 296
           LSD ID K+WLQALE
Sbjct: 192 LSDAIDKKQWLQALE 206


>XP_019455877.1 PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Lupinus angustifolius] OIW18799.1
           hypothetical protein TanjilG_13551 [Lupinus
           angustifolius]
          Length = 497

 Score = 59.3 bits (142), Expect = 3e-08
 Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 32/127 (25%)
 Frame = +3

Query: 12  MASFSLSFPHPTKSNPIPLSNNN-----------------------NKIPQSNS---KLK 113
           M+S S+SF      +PIPL NNN                       +K P S+S   K K
Sbjct: 1   MSSISISFSCSIIPSPIPLHNNNYPFPTTTQAPIFRVTLFAISSPPSKSPSSSSQDVKKK 60

Query: 114 VSKKGQFPTLSVKETSNFSNQTGNKKIPIKNMVRKNE------VWVNTVTEALSDCIDNK 275
             K+G+FP  S  +++        ++ PIKN+ ++ +       WVNTV EALS+ ++ K
Sbjct: 61  HWKRGEFPGTSQTQST--------RRTPIKNIKKRLDKKNIAKAWVNTVAEALSERVEKK 112

Query: 276 EWLQALE 296
           +WLQALE
Sbjct: 113 QWLQALE 119


>XP_008458291.1 PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic [Cucumis melo]
          Length = 497

 Score = 59.3 bits (142), Expect = 3e-08
 Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 6/95 (6%)
 Frame = +3

Query: 30  SFPHPTKSNPIPLSNNNNKIPQSNSKLKVSKKGQFPTLSVKETSNFSNQTGNKKIPIKNM 209
           +F  PT+ +P+P +++      S +K +  K+G+FP ++   T         +K P+KN+
Sbjct: 48  AFAAPTRKSPVPSTSS------SPAKKRHWKQGEFPGITETPT--------RRKTPLKNV 93

Query: 210 VRKNE------VWVNTVTEALSDCIDNKEWLQALE 296
            +K +       W NTVTEALSD I NK WL+ALE
Sbjct: 94  KKKLDRKNNAKAWANTVTEALSDHISNKRWLEALE 128


>XP_008223486.1 PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic [Prunus mume]
          Length = 523

 Score = 58.9 bits (141), Expect = 5e-08
 Identities = 43/123 (34%), Positives = 61/123 (49%), Gaps = 29/123 (23%)
 Frame = +3

Query: 15  ASFSLSFPHPTKSNPIPLSNNNNKIPQ---SNSKLKVSKKGQFPTLSVKETSNFSNQTG- 182
           +S SLSF      +P+PL+ N+  I +   SN KL V      P    + TS+ S++T  
Sbjct: 25  SSISLSFSSSLLPHPLPLNKNSTAIHRAHDSNFKL-VHCAFAAPATRTRSTSSSSSETRK 83

Query: 183 -------------------NKKIPIKNMVRKNE------VWVNTVTEALSDCIDNKEWLQ 287
                              +++ P+KN+ +K +       W NTVTEALSD ID K+WLQ
Sbjct: 84  RHWKQGEFPGVSETSIPGTHRRAPLKNVKKKLDRKNNAKAWANTVTEALSDAIDKKQWLQ 143

Query: 288 ALE 296
           ALE
Sbjct: 144 ALE 146


>XP_011071330.1 PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic [Sesamum indicum]
          Length = 508

 Score = 58.5 bits (140), Expect = 6e-08
 Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 14/99 (14%)
 Frame = +3

Query: 42  PTKSNPIP---LSNNNNKIPQSNSKLKVSKK-----GQFPTLSVKETSNFSNQTGNKKIP 197
           PT S P+    +S+       S++ L + KK     G++P +S    ++FS+   N+  P
Sbjct: 25  PTASRPLRRLLISSATAPSSSSSTTLNLPKKKHWKVGEYPGVSEASITHFSSNNKNRT-P 83

Query: 198 IKNMVRKNE------VWVNTVTEALSDCIDNKEWLQALE 296
           IKN+ +K +       W NTVTEALSD ID K+WL+AL+
Sbjct: 84  IKNIKKKLDKKNNAKAWANTVTEALSDAIDKKQWLRALQ 122


>XP_008390371.1 PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Malus domestica]
          Length = 666

 Score = 58.5 bits (140), Expect = 7e-08
 Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 6/75 (8%)
 Frame = +3

Query: 90  PQSNSKLKVSKKGQFPTLSVKETSNFSNQTGNKKIPIKNMVRKNE------VWVNTVTEA 251
           P S+++ K  K+G+FP   V ETS  +     +K P+KN+ +K +       WVNTVTEA
Sbjct: 170 PSSDNRKKHWKQGEFP--GVSETSIPAIY---RKPPLKNVKKKLDRKNNAKAWVNTVTEA 224

Query: 252 LSDCIDNKEWLQALE 296
           LSD ID K+WLQALE
Sbjct: 225 LSDAIDKKQWLQALE 239


>XP_015062643.1 PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like isoform X2 [Solanum pennellii]
          Length = 470

 Score = 58.2 bits (139), Expect = 9e-08
 Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
 Frame = +3

Query: 120 KKGQFPTLSVKETSNFSNQTGNKKIPIKNMVRKNEV--WVNTVTEALSDCIDNKEWLQAL 293
           K+G++P  S    S+ +N+ G +    K + RKN    WVNTV EALSDCID K+W QAL
Sbjct: 58  KEGEYPGFSEVSVSHLNNKKGRRTPINKKIDRKNTANPWVNTVPEALSDCIDKKQWQQAL 117

Query: 294 E 296
           +
Sbjct: 118 Q 118


>KHN03285.1 Pentatricopeptide repeat-containing protein, chloroplastic [Glycine
           soja]
          Length = 488

 Score = 58.2 bits (139), Expect = 9e-08
 Identities = 43/115 (37%), Positives = 56/115 (48%), Gaps = 20/115 (17%)
 Frame = +3

Query: 12  MASFSLSFPHPTKSNPIPLSNNNNKIPQSNS--------------KLKVSKKGQFPTLSV 149
           MAS SLSF      + IP   +N      N               K +  KKG+FP  S 
Sbjct: 1   MASISLSFCSSIVPSRIPHDKSNKTHSHHNPTFPLIRFGISAPAVKKRHWKKGEFPATS- 59

Query: 150 KETSNFSNQTGNKKIPIKNMVRKNE------VWVNTVTEALSDCIDNKEWLQALE 296
               +F N T  +K P+KN+ +K +       WVNTVTE+LS+ I NK WLQAL+
Sbjct: 60  --QPSFPNDT-RRKTPLKNLKKKFDKKNDAKAWVNTVTESLSERIHNKHWLQALQ 111