BLASTX nr result

ID: Lithospermum23_contig00024133 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00024133
         (328 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KNA24188.1 hypothetical protein SOVF_017170 [Spinacia oleracea]        54   2e-06
KNA17613.1 hypothetical protein SOVF_078610 [Spinacia oleracea]        54   3e-06

>KNA24188.1 hypothetical protein SOVF_017170 [Spinacia oleracea]
          Length = 190

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
 Frame = +3

Query: 81  YCFGKNLWVSFRYETVFRACYQCGRIRHSLIHYR---HNADTTLNYFLEHLHNHNFDNNL 251
           Y +GK++WV FRYE VF  C +CG+I H ++++    H   + +N  +  +   +     
Sbjct: 48  YEYGKSVWVDFRYEGVFHFCKRCGKIGHYMVNFEAPWHQIRSEVNRTI--IEASDLQVMY 105

Query: 252 IDYDSPLYDQRIRACPNTDVYRNT 323
              ++PLY  +I+  PN D +R T
Sbjct: 106 GRENAPLYTNKIKGLPNYDNFRTT 129


>KNA17613.1 hypothetical protein SOVF_078610 [Spinacia oleracea]
          Length = 292

 Score = 53.9 bits (128), Expect = 3e-06
 Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
 Frame = +3

Query: 72  CCSYCFGKNLWVSFRYETVFRACYQCGRIRHSLIHYRHNADTTLNYFLEHLHNHN-FDNN 248
           C  Y  G  +WVSFRYE VFR C  CG+I H  +  +          +E +   N  D+N
Sbjct: 61  CFEYEEGHLIWVSFRYEKVFRFCKHCGKIGHKTVTCKTPIKKAEEDIMEVMRRMNKGDDN 120

Query: 249 LI--DYDSPLYDQRIRACPNTDVYRNTT 326
           +I  D + PLY  +IR  P +   +NTT
Sbjct: 121 VIFDDENLPLYTNKIRGLPGSP--KNTT 146


Top