BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00023671
         (2102 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_011073037.1 PREDICTED: retrovirus-related Pol polyprotein fro...   187   1e-48
XP_011070172.1 PREDICTED: glutamate receptor 2.8-like [Sesamum i...   164   1e-38
XP_012849888.1 PREDICTED: retrovirus-related Pol polyprotein fro...   152   2e-35
KYP76810.1 Retrovirus-related Pol polyprotein from transposon TN...   154   5e-35
KYP76811.1 Retrovirus-related Pol polyprotein from transposon TN...   153   7e-35
KYP34487.1 Retrovirus-related Pol polyprotein from transposon TN...   148   1e-34
KYP68607.1 Retrovirus-related Pol polyprotein from transposon TN...   148   3e-33
P10978.1 RecName: Full=Retrovirus-related Pol polyprotein from t...   145   3e-32
KYP53808.1 Retrovirus-related Pol polyprotein from transposon TN...   138   3e-31
AAK29467.1 polyprotein-like [Solanum chilense]                        140   8e-31
KYP49408.1 Retrovirus-related Pol polyprotein from transposon TN...   134   3e-30
KYP53895.1 Retrovirus-related Pol polyprotein from transposon TN...   133   3e-29
CDN96898.1 putative Ty-1 copia retrotransposon [Phaseolus vulgaris]   132   3e-28
AER13159.1 putative Ty-1 copia retrotransposon [Phaseolus vulgaris]   132   4e-28
CAN71533.1 hypothetical protein VITISV_018181 [Vitis vinifera]        131   8e-28
KYP42945.1 Retrovirus-related Pol polyprotein from transposon TN...   127   2e-27
KYP31853.1 Retrovirus-related Pol polyprotein from transposon TN...   130   2e-27
CDP17738.1 unnamed protein product [Coffea canephora]                 127   1e-26
AAV88069.1 hypothetical retrotransposon [Ipomoea batatas]             127   1e-26
KZV56298.1 hypothetical protein F511_00295 [Dorcoceras hygrometr...   127   2e-26

>XP_011073037.1 PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
            1-94 [Sesamum indicum]
          Length = 472

 Score =  187 bits (476), Expect = 1e-48
 Identities = 112/294 (38%), Positives = 171/294 (58%), Gaps = 18/294 (6%)
 Frame = +3

Query: 12   VRGRSQ-DRFNAQKNAGYGEYREKNTYTKKGRSKSRPNV----------RKCYNCHEGGH 158
            VRGR++   FN++ N+         + TK  RSKSRP            R+CYNC   GH
Sbjct: 197  VRGRTRFGNFNSRYNS------RSRSKTKTNRSKSRPRETNLRDDKIRDRRCYNCGTKGH 250

Query: 159  LIKDCPKPKK-NQHHVYD------NVAVCEDNLGDIFMINNICNYPSLNNILSDPLCDSD 317
             IKDC KP++ N+   YD      NV++  ++ G++F++    +  + +          +
Sbjct: 251  YIKDCRKPRRENRDRNYDDKEKVSNVSI--ESNGEVFVVYEANSVSTFDM--------HE 300

Query: 318  WLVDSGSTFHVTPYKHMFLNYKEIEHGFMCTANSKNYNVIGI*DVCLRFSSGFEFTLKNV 497
            WL+DSG TFH++P+K +F N K    GF+  AN K   + G+ D+ L F  G++  LKNV
Sbjct: 301  WLIDSGCTFHMSPFKDIFTNLKYEHAGFVSMANEKKCEIKGLGDISLCFD-GYKMLLKNV 359

Query: 498  RHVPELRYNLLSCASLEDVGLEGKWGKGVMKIRKGSLVILTAVKKNNLYVCHAEPVGTSM 677
            R+VP+L +NL+SCA+LE+ GLEG+WGKG+MKI KGSLV+  A +K NLY+C A     + 
Sbjct: 360  RYVPDLSHNLISCAALEENGLEGRWGKGLMKIMKGSLVVFKAERKRNLYICTASYDNIAA 419

Query: 678  NIIIDDKSIF*NNRLGHKSDRRLEILHNRSHLSSDKLPFIPLDEPYVIGKQRKV 839
            ++ + D +   + RLGH S + L+ L  R  + +DK+  +   +  V+GKQ +V
Sbjct: 420  SVSVCDLTSLWHKRLGHISQKGLDFL-KRDGVLNDKIDKLDFCDECVMGKQHRV 472


>XP_011070172.1 PREDICTED: glutamate receptor 2.8-like [Sesamum indicum]
          Length = 1131

 Score =  164 bits (416), Expect = 1e-38
 Identities = 88/214 (41%), Positives = 129/214 (60%), Gaps = 10/214 (4%)
 Frame = +3

Query: 3   VMHVRGRSQDRFNAQKNAGYGEYREKNTYTKKGRSKSRPN------VRKCYNCHEGGHLI 164
           V  VRGR + R N++ N      + +N Y  K R +   N       R+CYNC   GH I
Sbjct: 231 VNSVRGRPKFR-NSRYNRSKSRSKSRNGYRNKSRPRENFNNDDKTRERRCYNCGIKGHYI 289

Query: 165 KDCPKPKKNQHHVYDNVA----VCEDNLGDIFMINNICNYPSLNNILSDPLCDSDWLVDS 332
           KDC KP+K+    Y+       V ++N G++F++   C   S+N+         +WL+DS
Sbjct: 290 KDCRKPRKDNRDRYEEKEKVNNVSDENNGEVFVV---CEANSVNSFDMH-----EWLIDS 341

Query: 333 GSTFHVTPYKHMFLNYKEIEHGFMCTANSKNYNVIGI*DVCLRFSSGFEFTLKNVRHVPE 512
           G TFH++P+K +F N +    GF+  AN K   + G+ D+ + F  G++ TLKNVR+VP+
Sbjct: 342 GCTFHMSPFKDIFTNLRYEHAGFVSMANEKRCEIEGLGDISMCFKDGYKMTLKNVRYVPD 401

Query: 513 LRYNLLSCASLEDVGLEGKWGKGVMKIRKGSLVI 614
           L +NL+SCA+LE+ GLEG+WGKG+MKI KGSLV+
Sbjct: 402 LSHNLISCAALEEDGLEGRWGKGLMKIMKGSLVV 435


>XP_012849888.1 PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Erythranthe guttata]
          Length = 598

 Score =  152 bits (384), Expect = 2e-35
 Identities = 79/192 (41%), Positives = 120/192 (62%)
 Frame = +3

Query: 270 YPSLNNILSDPLCDSDWLVDSGSTFHVTPYKHMFLNYKEIEHGFMCTANSKNYNVIGI*D 449
           + S+N++L+  L +++WL+DS  ++H+TP + +F +Y ++++  +  A+     V GI  
Sbjct: 2   HASVNSVLAS-LSENEWLLDSACSYHMTPRREVFSDYVQMKNCGVTLADGTMIVVNGIGT 60

Query: 450 VCLRFSSGFEFTLKNVRHVPELRYNLLSCASLEDVGLEGKWGKGVMKIRKGSLVILTAVK 629
           VCL+F SG   TLKNVRHVP L +NL+SCA LED G  G WG G M I KGS  +  A++
Sbjct: 61  VCLKFVSGSVLTLKNVRHVPTLSHNLISCAVLEDDGFRGDWGDGCMNIMKGSRYLFKALR 120

Query: 630 KNNLYVCHAEPVGTSMNIIIDDKSIF*NNRLGHKSDRRLEILHNRSHLSSDKLPFIPLDE 809
             N+YVC AE    SMN++ +D S   +  LGH S++ L ILH   +  +DK+  + L +
Sbjct: 121 MGNMYVCSAES-SASMNVVQNDLSELWHKGLGHMSNKWLSILHKNQYFGNDKVSSVTLCD 179

Query: 810 PYVIGKQRKVTF 845
             ++GKQ  V F
Sbjct: 180 SCILGKQTHVLF 191


>KYP76810.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1305

 Score =  154 bits (388), Expect = 5e-35
 Identities = 97/274 (35%), Positives = 143/274 (52%)
 Frame = +3

Query: 39  NAQKNAGYGEYREKNTYTKKGRSKSRPNVRKCYNCHEGGHLIKDCPKPKKNQHHVYDNVA 218
           N  KN   G  + ++ Y  +GRSKSR  +  CY C   GH   +C   K++Q        
Sbjct: 205 NRGKNETRGRSKSRDQYQSRGRSKSRSKIT-CYYCGRMGHRKMECRSFKRDQK------- 256

Query: 219 VCEDNLGDIFMINNICNYPSLNNILSDPLCDSDWLVDSGSTFHVTPYKHMFLNYKEIEHG 398
             ED L   ++I          NIL+    DS W+VDSG++FHVTP+   F +Y+  + G
Sbjct: 257 -AEDML---YIIRE-------GNILNIAYDDSSWIVDSGASFHVTPHGSFFSSYQSGDFG 305

Query: 399 FMCTANSKNYNVIGI*DVCLRFSSGFEFTLKNVRHVPELRYNLLSCASLEDVGLEGKWGK 578
            +   N     ++GI D+ L  S+G    LK+VRHVP +R NL+S   L+D GL   +G+
Sbjct: 306 TVQMGNQDRSKIVGIGDIILTTSTGCRLVLKDVRHVPAMRLNLISAGKLDDAGLMNYFGE 365

Query: 579 GVMKIRKGSLVILTAVKKNNLYVCHAEPVGTSMNIIIDDKSIF*NNRLGHKSDRRLEILH 758
           G  K+ KGSLV+    K+ +LYV  A+     +NI  DD  ++ + RLGH S++ L IL 
Sbjct: 366 GKWKLTKGSLVMARGKKEGSLYVMQAKLCKGEVNITTDDLEVW-HKRLGHISEKGLHILA 424

Query: 759 NRSHLSSDKLPFIPLDEPYVIGKQRKVTFVNDAP 860
            +  LS+ K   +      + GKQ +V F   +P
Sbjct: 425 RKQLLSNVKGKSLDPCAHCLAGKQHRVAFQRSSP 458


>KYP76811.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1305

 Score =  153 bits (387), Expect = 7e-35
 Identities = 97/274 (35%), Positives = 143/274 (52%)
 Frame = +3

Query: 39  NAQKNAGYGEYREKNTYTKKGRSKSRPNVRKCYNCHEGGHLIKDCPKPKKNQHHVYDNVA 218
           N  KN   G  + ++ Y  +GRSKSR  +  CY C   GH   +C   K++Q        
Sbjct: 205 NRGKNETRGRSKSRDQYQSRGRSKSRSKIT-CYYCGRMGHRKMECRSFKRDQK------- 256

Query: 219 VCEDNLGDIFMINNICNYPSLNNILSDPLCDSDWLVDSGSTFHVTPYKHMFLNYKEIEHG 398
             ED L   ++I          NIL+    DS W+VDSG++FHVTP+   F +Y+  + G
Sbjct: 257 -AEDML---YIIRE-------GNILNIAYDDSSWIVDSGASFHVTPHGSFFSSYQSGDFG 305

Query: 399 FMCTANSKNYNVIGI*DVCLRFSSGFEFTLKNVRHVPELRYNLLSCASLEDVGLEGKWGK 578
            +   N     ++GI D+ L  S+G    LK+VRHVP +R NL+S   L+D GL   +G+
Sbjct: 306 TVQMGNQDRSKIVGIGDIILTTSTGCRLVLKDVRHVPAMRLNLISAGKLDDAGLMNYFGE 365

Query: 579 GVMKIRKGSLVILTAVKKNNLYVCHAEPVGTSMNIIIDDKSIF*NNRLGHKSDRRLEILH 758
           G  K+ KGSLV+    K+ +LYV  A+     +NI  DD  ++ + RLGH S++ L IL 
Sbjct: 366 GKWKLTKGSLVMARGKKEGSLYVMQAKLCKGEVNITTDDIEVW-HKRLGHISEKGLHILA 424

Query: 759 NRSHLSSDKLPFIPLDEPYVIGKQRKVTFVNDAP 860
            +  LS+ K   +      + GKQ +V F   +P
Sbjct: 425 RKQLLSNVKGKSLDPCAHCLAGKQHRVAFQRSSP 458


>KYP34487.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 485

 Score =  148 bits (373), Expect = 1e-34
 Identities = 89/266 (33%), Positives = 141/266 (53%), Gaps = 13/266 (4%)
 Frame = +3

Query: 87  YTKKGRSKSR----PNVRK---CYNCHEGGHLIKDCPKPKKNQHHVY----DNVAVCEDN 233
           Y  +GRSKSR    P  R    C+NC + GH    C  PKKN++H      ++     D 
Sbjct: 215 YNSRGRSKSRAKGQPKFRNDIVCWNCDKRGHFTNQCKAPKKNKNHKKRDDDESANAATDE 274

Query: 234 LGDIFMINNICNYPSLNNILSDPLCDSDWLVDSGSTFHVTPYKHMFLNYKEIEHGFMCTA 413
           + D      IC+       L  P+    W++DSG++FH TP   +  NY     G +  A
Sbjct: 275 IDDAL----ICS-------LDSPI--ESWIMDSGASFHTTPSNELLTNYVSGRFGKVYLA 321

Query: 414 NSKNYNVIGI*DVCLRFSSGFEFTLKNVRHVPELRYNLLSCASLEDVGLEGKWGKGVMKI 593
           + K  N++G  D+ +R SSG  +TLKNVRH+P L+ NL+S   L+D G E  +G G  K+
Sbjct: 322 DGKPLNIVGKGDIAIRTSSGSHWTLKNVRHIPALKRNLISVGQLDDEGHETTFGDGAWKV 381

Query: 594 RKGSLVILTAVKKNNLYVCHAEPVGTSMNIIID--DKSIF*NNRLGHKSDRRLEILHNRS 767
           +KG+L++    K+ +LY+   E    +M  + +  + S   + RLGH S++ ++++  + 
Sbjct: 382 KKGNLIVARGKKRGSLYMVADE----NMIAVTEAANNSFLWHQRLGHMSEKGMKLMATKG 437

Query: 768 HLSSDKLPFIPLDEPYVIGKQRKVTF 845
            LS  K   +   E  ++GKQRK++F
Sbjct: 438 KLSKLKHVDVGTCEHCILGKQRKISF 463


>KYP68607.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1291

 Score =  148 bits (374), Expect = 3e-33
 Identities = 91/285 (31%), Positives = 149/285 (52%), Gaps = 14/285 (4%)
 Frame = +3

Query: 87  YTKKGRSKSR----PNVRK---CYNCHEGGHLIKDCPKPKKNQHHVY----DNVAVCEDN 233
           Y  +GRSKSR    P  R    C+NC + GH    C  PKKN++H      ++     D 
Sbjct: 193 YNSRGRSKSRAKGQPKFRNDIVCWNCDKRGHFTNQCKAPKKNKNHKKRDDDESANAATDE 252

Query: 234 LGDIFMINNICNYPSLNNILSDPLCDSDWLVDSGSTFHVTPYKHMFLNYKEIEHGFMCTA 413
           + D      IC+       L  P+    W++DSG++FH TP   +  NY     G +  A
Sbjct: 253 IDDAL----ICS-------LDSPI--ESWIMDSGASFHTTPSNELLTNYVSGRFGKVYLA 299

Query: 414 NSKNYNVIGI*DVCLRFSSGFEFTLKNVRHVPELRYNLLSCASLEDVGLEGKWGKGVMKI 593
           + K  N++G  D+ +R SSG  +TLKNVRH+P L+ NL+S   L+D G E  +G G  K+
Sbjct: 300 DGKPLNIVGKGDIAIRTSSGSHWTLKNVRHIPALKRNLISVGQLDDEGHETTFGDGAWKV 359

Query: 594 RKGSLVILTAVKKNNLYVCHAEPVGTSMNIIID--DKSIF*NNRLGHKSDRRLEILHNRS 767
           +KG+L++    K+ +LY+   E    +M  + +  + S   + RLGH S++ ++++  + 
Sbjct: 360 KKGNLIVARGKKRGSLYMVADE----NMIAVTEAANNSFLWHQRLGHMSEKGMKLMATKG 415

Query: 768 HLSSDKLPFIPLDEPYVIGKQRKVTFVNDAPS-EVEHVPVISNEV 899
            LS  K   +   E  ++GKQRK++F     + + E + ++  +V
Sbjct: 416 KLSKLKHVDVGTCEHCILGKQRKISFSRQGKTLKTERLELVHTDV 460


>P10978.1 RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease CAA32025.1 unnamed protein product
            [Nicotiana tabacum]
          Length = 1328

 Score =  145 bits (366), Expect = 3e-32
 Identities = 98/304 (32%), Positives = 158/304 (51%), Gaps = 9/304 (2%)
 Frame = +3

Query: 15   RGRSQDRFNAQKNAGYGEYREKNTYTKKGRSKSRPNVRKCYNCHEGGHLIKDCPKPKKNQ 194
            RGRS  R  +  N G    R K+    K RSKSR  VR CYNC++ GH  +DCP P+K +
Sbjct: 201  RGRSYQR--SSNNYGRSGARGKS----KNRSKSR--VRNCYNCNQPGHFKRDCPNPRKGK 252

Query: 195  HHVY-----DNVAVCEDNLGDIFMINNI---CNYPSLNNILSDPLCDSDWLVDSGSTFHV 350
                     DN A    N  ++ +  N    C +      LS P  +S+W+VD+ ++ H 
Sbjct: 253  GETSGQKNDDNTAAMVQNNDNVVLFINEEEECMH------LSGP--ESEWVVDTAASHHA 304

Query: 351  TPYKHMFLNYKEIEHGFMCTANSKNYNVIGI*DVCLRFSSGFEFTLKNVRHVPELRYNLL 530
            TP + +F  Y   + G +   N+    + GI D+C++ + G    LK+VRHVP+LR NL+
Sbjct: 305  TPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLI 364

Query: 531  SCASLEDVGLEGKWGKGVMKIRKGSLVILTAVKKNNLYVCHAEPVGTSMNIIIDDKSI-F 707
            S  +L+  G E  +     ++ KGSLVI   V +  LY  +AE     +N   D+ S+  
Sbjct: 365  SGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAEICQGELNAAQDEISVDL 424

Query: 708  *NNRLGHKSDRRLEILHNRSHLSSDKLPFIPLDEPYVIGKQRKVTFVNDAPSEVEHVPVI 887
             + R+GH S++ L+IL  +S +S  K   +   +  + GKQ +V+F   +  ++  + ++
Sbjct: 425  WHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLV 484

Query: 888  SNEV 899
             ++V
Sbjct: 485  YSDV 488


>KYP53808.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 464

 Score =  138 bits (347), Expect = 3e-31
 Identities = 90/283 (31%), Positives = 146/283 (51%), Gaps = 11/283 (3%)
 Frame = +3

Query: 48  KNAGYGEYREKNTYTKKGRSKSRPNVR--KCYNCHEGGHLIKDC------PKPKKNQHHV 203
           +N G  + +E+ +   K RSKS    +  +C+ CH+ GH+ K+C       K KK +H  
Sbjct: 101 ENMGRSQKKEQKSGRDKSRSKSISRYKNVECHYCHKIGHIQKNCFLWKKESKDKKGKHRE 160

Query: 204 YDNV---AVCEDNLGDIFMINNICNYPSLNNILSDPLCDSDWLVDSGSTFHVTPYKHMFL 374
            D+     V     GD+  + +      + N++SD   +S W+VDSG+T HVT  K  F 
Sbjct: 161 RDHNDGDRVTTATCGDLVCLRDY----DIVNLVSD---ESMWIVDSGATLHVTSRKEFFT 213

Query: 375 NYKEIEHGFMCTANSKNYNVIGI*DVCLRFSSGFEFTLKNVRHVPELRYNLLSCASLEDV 554
           +Y   + G +   N     VIG+ DVCL+ + G +  LK V+HVP++R+NL+S   L+D 
Sbjct: 214 SYTSGDFGVLKMGNDGVSKVIGVGDVCLQTNMGMQLLLKGVKHVPDVRFNLISVQVLDDG 273

Query: 555 GLEGKWGKGVMKIRKGSLVILTAVKKNNLYVCHAEPVGTSMNIIIDDKSIF*NNRLGHKS 734
           G +  +G G  K+ KG+L++    K + LY   A     S+N +  + S++ + RLGH S
Sbjct: 274 GYDNHFGSGKWKLTKGNLIVAKGEKNSKLYWTKALVAKDSVNAMYMESSLW-HRRLGHIS 332

Query: 735 DRRLEILHNRSHLSSDKLPFIPLDEPYVIGKQRKVTFVNDAPS 863
           ++ +  L  +  L   K   +      + GKQ +V+F    PS
Sbjct: 333 EKGMNCLAKKDMLLGLKNVELEKCSHCMAGKQARVSFKKYPPS 375


>AAK29467.1 polyprotein-like [Solanum chilense]
          Length = 1328

 Score =  140 bits (354), Expect = 8e-31
 Identities = 92/301 (30%), Positives = 152/301 (50%), Gaps = 6/301 (1%)
 Frame = +3

Query: 15   RGRSQDRFNAQKNAGYGEYREKNTYTKKGRSKSRPNVRKCYNCHEGGHLIKDCPKPKKNQ 194
            RGRS  R  +  N G    R K+    K RSKS+   R CYNC + GH  +DCP PK+ +
Sbjct: 202  RGRSYQR--SSSNYGRSGARGKS----KVRSKSK--ARNCYNCDQPGHFKRDCPNPKRGK 253

Query: 195  HHVY-----DNVAVCEDNLGDIFMINNICNYPSLNNILSDPLCDSDWLVDSGSTFHVTPY 359
                     DN A    N  D+ ++ N          +     +S+W+VD+ +++H TP 
Sbjct: 254  GESSGQKNDDNTAAMVQNNDDVVLLIN-----EEEECMHLAGTESEWVVDTAASYHATPV 308

Query: 360  KHMFLNYKEIEHGFMCTANSKNYNVIGI*DVCLRFSSGFEFTLKNVRHVPELRYNLLSCA 539
            + +F  Y   ++G +   N+    + GI D+C + + G    LK+VRHVP+LR NL+S  
Sbjct: 309  RDLFCRYVAGDYGNVKMGNTSYSKIAGIGDICFKTNVGCTLVLKDVRHVPDLRMNLISGI 368

Query: 540  SLEDVGLEGKWGKGVMKIRKGSLVILTAVKKNNLYVCHAEPVGTSMNIIIDDKSI-F*NN 716
            +L+  G E  +     ++ KG+LVI   V +  LY  +AE     +N   ++ S    + 
Sbjct: 369  ALDQDGYENYFANQKWRLTKGALVIAKGVARGTLYRTNAEICQGELNAAHEENSADLWHK 428

Query: 717  RLGHKSDRRLEILHNRSHLSSDKLPFIPLDEPYVIGKQRKVTFVNDAPSEVEHVPVISNE 896
            R+GH S++ L+IL  +S +S  K   I     ++ GKQ +V+F   +  +   + ++ ++
Sbjct: 429  RMGHTSEKGLQILSKKSLISFTKGTTIKPCNYWLFGKQHRVSFQTSSERKSNILDLVYSD 488

Query: 897  V 899
            V
Sbjct: 489  V 489


>KYP49408.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 414

 Score =  134 bits (336), Expect = 3e-30
 Identities = 86/284 (30%), Positives = 144/284 (50%), Gaps = 11/284 (3%)
 Frame = +3

Query: 48  KNAGYGEYREKNTYTKKGRSKSRPNVR--KCYNCHEGGHLIKDC---------PKPKKNQ 194
           +N G  + +E+ +   K RSKSR   +  +C+ CH+ GH+ K+           K K+ +
Sbjct: 101 ENRGRSQRKEQKSGRDKSRSKSRSRYKNVECHYCHKIGHIQKNYFLWKKESKDKKGKQRE 160

Query: 195 HHVYDNVAVCEDNLGDIFMINNICNYPSLNNILSDPLCDSDWLVDSGSTFHVTPYKHMFL 374
               D   V      D+  + +      + N++SD   +S W++DSG+T HVT  K  F 
Sbjct: 161 RDHNDGDHVTTATCSDLVCLRDY----DIVNLVSD---ESMWIIDSGATLHVTSRKEFFT 213

Query: 375 NYKEIEHGFMCTANSKNYNVIGI*DVCLRFSSGFEFTLKNVRHVPELRYNLLSCASLEDV 554
           +Y   + G +   N     VIG+ DVCL+ + G +  L+ V+HVP++R+NL+S   L+D 
Sbjct: 214 SYTPGDFGVLKMGNDGVSKVIGVGDVCLQTNMGMQLLLRGVKHVPDVRFNLISMQVLDDG 273

Query: 555 GLEGKWGKGVMKIRKGSLVILTAVKKNNLYVCHAEPVGTSMNIIIDDKSIF*NNRLGHKS 734
           G + ++G G  K+ KG+L++    K + LY   A     S+N +  + S++ + RLGH S
Sbjct: 274 GYDNQFGSGKWKLTKGNLIVAKGEKNSKLYWTKALVAKDSVNAMYMESSLW-HRRLGHIS 332

Query: 735 DRRLEILHNRSHLSSDKLPFIPLDEPYVIGKQRKVTFVNDAPSE 866
           +  L  L  +  L   K   +      + GKQ +V+F    PS+
Sbjct: 333 ENGLNCLAKKDMLIGLKNVELEKSSHCMAGKQTRVSFKKHPPSK 376


>KYP53895.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 556

 Score =  133 bits (335), Expect = 3e-29
 Identities = 84/282 (29%), Positives = 144/282 (51%), Gaps = 11/282 (3%)
 Frame = +3

Query: 48   KNAGYGEYREKNTYTKKGRSKSRPNVR--KCYNCHEGGHLIKDC---------PKPKKNQ 194
            +N G  + +E+ +   K RSKSR   +  +C+ CH+ GH+ K+C          K K+ +
Sbjct: 194  ENRGRSQRKEQKSGRDKSRSKSRSRYKNVECHYCHKIGHIQKNCFLWKKESKDKKGKQRE 253

Query: 195  HHVYDNVAVCEDNLGDIFMINNICNYPSLNNILSDPLCDSDWLVDSGSTFHVTPYKHMFL 374
                D   V     GD+  + +      + N++SD   +S W+VDSG+T HVT  K +F 
Sbjct: 254  RDHNDGDRVTTATCGDLVCLRDY----DIVNLVSD---ESMWIVDSGATLHVTSRKELFT 306

Query: 375  NYKEIEHGFMCTANSKNYNVIGI*DVCLRFSSGFEFTLKNVRHVPELRYNLLSCASLEDV 554
            +Y   + G +   N     VIG+ D+CL+ +   +  L+ V+HVP++R+NL+S   L+D 
Sbjct: 307  SYTPGDFGVLKMGNDGVSKVIGVGDICLQTNMRMQLLLRGVKHVPDVRFNLISVQVLDDG 366

Query: 555  GLEGKWGKGVMKIRKGSLVILTAVKKNNLYVCHAEPVGTSMNIIIDDKSIF*NNRLGHKS 734
            G +  +G G  K+ KG+L++    K + LY   A     S+N +  + S++ + RLGH +
Sbjct: 367  GYDNHFGSGKWKLTKGNLIVAKGEKNSKLYWTKALVAKDSVNAMYMESSLW-HRRLGHIN 425

Query: 735  DRRLEILHNRSHLSSDKLPFIPLDEPYVIGKQRKVTFVNDAP 860
            ++ L  L  +  L   K   +      + GK+ +V+F    P
Sbjct: 426  EKGLNCLAKKDMLPGLKNAKLEKCSHCMAGKKTRVSFKKHPP 467


>CDN96898.1 putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 813

 Score =  132 bits (332), Expect = 3e-28
 Identities = 89/271 (32%), Positives = 139/271 (51%), Gaps = 13/271 (4%)
 Frame = +3

Query: 72  REKNTYTKKGRSKSRPNV---RKCYNCHEGGHLIKDCPKPKKNQHHVYD-NVAVCEDNL- 236
           ++  T  ++G SKS+  V    +C  CHE GH  KDCPK +K +    D NVA C+ ++ 
Sbjct: 147 QQSQTKERRGMSKSKGRVVAKDECAFCHEKGHWKKDCPKLQKKEKVPQDANVAECKSDVE 206

Query: 237 GDIFMINNIC--NYPSLNNILSDPLCDSDWLVDSGSTFHVTPYKHMFLNYKEIEHGFMCT 410
            DI +I ++   +YP             +W++DSG T+H+ P +  F  ++E++ G +  
Sbjct: 207 SDISLIVSLSASSYPD------------EWILDSGCTYHMCPIRDWFFEFQELDGGVVYM 254

Query: 411 ANSKNYNVIGI*DVCLRFSSGFEFTLKNVRHVPELRYNLLSCASLEDVGLEGKWGKGVMK 590
            N      +GI  + LR   G    L++VR+VP+L+ NL+S  +LE  GL      G++K
Sbjct: 255 GNDNPCKTVGIGSIKLRNHDGSTRILRDVRYVPKLKKNLISLGALESKGLVVTMRDGILK 314

Query: 591 IRKGSLVILTAVKKNNLYVCHAEPV------GTSMNIIIDDKSIF*NNRLGHKSDRRLEI 752
              G+LV+L  V KNNLY      V       TS +    + +   + RLGH  ++ L+I
Sbjct: 315 ATLGALVMLKGVMKNNLYYYQGSTVVGTVAAATSSSKKDAEAAKLWHMRLGHAGEKSLQI 374

Query: 753 LHNRSHLSSDKLPFIPLDEPYVIGKQRKVTF 845
           L  +  L   K   +   E  V+GKQR+V F
Sbjct: 375 LTKQGLLKGTKACKLEFCEHCVLGKQRRVKF 405


>AER13159.1 putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score =  132 bits (331), Expect = 4e-28
 Identities = 88/269 (32%), Positives = 137/269 (50%), Gaps = 11/269 (4%)
 Frame = +3

Query: 72  REKNTYTKKGRSKSRPNV---RKCYNCHEGGHLIKDCPKPKKNQHHVYD-NVAVCEDNL- 236
           ++  T  ++G SKS+       +C  CHE GH  KDCPK +K +  + D NVA C+ ++ 
Sbjct: 148 QQSQTKERRGMSKSKGRAVAKDECAFCHEKGHWKKDCPKLQKKEKVLQDANVAECKSDVE 207

Query: 237 GDIFMINNICNYPSLNNILSDPLCDSDWLVDSGSTFHVTPYKHMFLNYKEIEHGFMCTAN 416
            DI +I +          LS  L   +W++DSG T+H+ P +  F  ++E++ G +   N
Sbjct: 208 SDISLIVS----------LSASLYLDEWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGN 257

Query: 417 SKNYNVIGI*DVCLRFSSGFEFTLKNVRHVPELRYNLLSCASLEDVGLEGKWGKGVMKIR 596
                 +GI  + LR   G    L++VR+VP+L+ NL+S  +LE  GL      G++K  
Sbjct: 258 DNPCKTVGIGSIKLRNHDGSTRILRDVRYVPKLKKNLISLGALESKGLVVTMRDGILKAT 317

Query: 597 KGSLVILTAVKKNNLYVCHAEPV------GTSMNIIIDDKSIF*NNRLGHKSDRRLEILH 758
            G+LV+L  V KNNLY      V       TS +    + +   + RLGH  ++ L+I  
Sbjct: 318 SGALVMLKGVMKNNLYYYQGSTVVGTVAAATSSSKKDAEATKLWHMRLGHAGEKSLQIFT 377

Query: 759 NRSHLSSDKLPFIPLDEPYVIGKQRKVTF 845
            +  L   K   +   E  V+GKQR+V F
Sbjct: 378 KQGLLKGTKACKLEFCEHCVLGKQRRVKF 406


>CAN71533.1 hypothetical protein VITISV_018181 [Vitis vinifera]
          Length = 1069

 Score =  131 bits (329), Expect = 8e-28
 Identities = 87/284 (30%), Positives = 144/284 (50%), Gaps = 3/284 (1%)
 Frame = +3

Query: 6   MHVRGRSQDRFNAQKNAGYGEYREKNTYTKKGRSKSRPNVRKCYNCHEGGHLIKDCPKPK 185
           + +RGR  DR     N+  G  + KN+   + +S+S   V+ C+NC + GH  + C  PK
Sbjct: 203 LEIRGRGNDR-----NSNQGRSKSKNSNQNRSKSRSGQQVQ-CWNCGKIGHFKRQCKSPK 256

Query: 186 KNQHHVYDNVAVCEDNLGDIFMINNICNYPSLNNILSDPLCDSDWLVDSGSTFHVTPYKH 365
           K     Y NV    + + D  ++            +  PL   DW++DSG+ FH TP++ 
Sbjct: 257 KKNKDDYANVVT--EEVHDXLLL-----------AVDRPL--DDWVLDSGALFHTTPHRE 301

Query: 366 MFLNYKEIEHGFMCTANSKNYNVIGI*DVCLRFSSGFEFTLKNVRHVPELRYNLLSCASL 545
           +  NY   + G +  AN+   +V+G+ DV +   +G  + L+ VRH+P+LR NL+S   L
Sbjct: 302 IIQNYAAGDFGKVYLANNSTLDVVGLGDVQISLXNGSVWLLEKVRHIPDLRRNLISVGQL 361

Query: 546 EDVGLEGKWGKGVMKIRKGSLVILTAVKKNNLYVCHAEPVGTSMNIIIDDKSIF---*NN 716
           +D G    +  G  K+ KG+ V+    K   LY+    P  T   I I D S +    + 
Sbjct: 362 DDEGHAILFVGGTWKVTKGARVLARGKKTGTLYMTSC-PRDT---IAIADASTYTSLWHR 417

Query: 717 RLGHKSDRRLEILHNRSHLSSDKLPFIPLDEPYVIGKQRKVTFV 848
           RLGH S++ +++L ++  L   K     + E  ++GKQ+ V+F+
Sbjct: 418 RLGHMSEKGMKMLLSKGKLPELKSIDFDMCESCILGKQKNVSFL 461


>KYP42945.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 497

 Score =  127 bits (319), Expect = 2e-27
 Identities = 88/282 (31%), Positives = 143/282 (50%), Gaps = 14/282 (4%)
 Frame = +3

Query: 96  KGRSKSRPNVRKCYNCHEGGHLIKDC-----------PKPKKNQHHVYDNVAV--CEDNL 236
           + +SKSR    +C+ CH+ GH+ ++C            K K+  H   D VA   C+D +
Sbjct: 4   RSKSKSRYKNVECHYCHKTGHIQRNCFLWKKENKGKKGKYKEKDHDGDDRVATATCDDLV 63

Query: 237 GDIFMINNICNYPSLNNILSDPLCDSDWLVDSGSTFHVTPYKHMFLNYKEIEHGFMCTAN 416
                   I +     N++SD   +S W+VDSG+T HVTP K  F +Y   + G +   N
Sbjct: 64  --------ILSDHGSVNLVSD---ESMWIVDSGATLHVTPRKEFFTSYTSGDFGVLKMGN 112

Query: 417 SKNYNVIGI*DVCLRFSSGFEFTLKNVRHVPELRYNLLSCASLEDVGLEGKWGKGVMKIR 596
                VIG+ DVCL+ + G +  L+ V+H P++R+NL+S   L+D G +  +G G  K+ 
Sbjct: 113 DGVSKVIGVGDVCLQTNMGMQLLLRGVKHAPDVRFNLISLQILDDGGYDNHFGSGKWKLT 172

Query: 597 KGSLVILTAVKKNNLYVCHAEPVGTSMNIIIDDKSIF*NNRLGHKSDRRLEILHNRSHLS 776
           KG+LV+    K + LY   A     S+N +  + S++ + RL H S+  L  L  +  L 
Sbjct: 173 KGNLVMAGGEKNSKLYWTKALVAKDSVNAMDMEASLW-HRRLSHISENGLNCLAKKDVLQ 231

Query: 777 SDKLPFIPLDEPYVIGKQRKVTFVNDAPS-EVEHVPVISNEV 899
             K   +      + GKQ +V F    PS ++E + ++ ++V
Sbjct: 232 GLKSVELEKCSYCMAGKQTRVFFKKHPPSRKLELLKLVHSDV 273


>KYP31853.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1314

 Score =  130 bits (326), Expect = 2e-27
 Identities = 88/290 (30%), Positives = 146/290 (50%), Gaps = 16/290 (5%)
 Frame = +3

Query: 24   SQDRFNAQKNAGYGEYREKNTYTK-KGRSKSRPNVRKCYNCHEGGHLIKDCPKPKKNQHH 200
            +Q   N   N G  + REK    K +GRSKSR  +  CY C + GH   +C   KK+Q  
Sbjct: 186  NQFEANVIDNRGRSKNREKGGRGKSQGRSKSRTRIC-CYYCGKPGHRKSECRFLKKDQQA 244

Query: 201  --VYDN-------------VAVCEDNLGDIFMINNICNYPSLNNILSDPLCDSDWLVDSG 335
              V+ +              AV  D   D+F++          N L+    +  W++DSG
Sbjct: 245  GTVHPDQIDPRKKKEDGTTTAVTSD---DVFLVGE-------ENYLNIAFDECIWIIDSG 294

Query: 336  STFHVTPYKHMFLNYKEIEHGFMCTANSKNYNVIGI*DVCLRFSSGFEFTLKNVRHVPEL 515
            ++FHVTP++  F +Y++ + G +   N     ++GI ++ L   +G +  LK VRHVP++
Sbjct: 295  ASFHVTPHEEFFSSYQKGDFGMVKMGNHVTSKIVGIGEIALMTENGNKLMLKEVRHVPDM 354

Query: 516  RYNLLSCASLEDVGLEGKWGKGVMKIRKGSLVILTAVKKNNLYVCHAEPVGTSMNIIIDD 695
            R NL+S + L++ G+  ++     K+ +GS+++    K+ +LY    +     MN+  D 
Sbjct: 355  RLNLISVSKLDEAGMINQFSADRWKLSRGSMIVARGKKEGSLYTMQGKICKGDMNVAQDA 414

Query: 696  KSIF*NNRLGHKSDRRLEILHNRSHLSSDKLPFIPLDEPYVIGKQRKVTF 845
                 + RLGH S++ LEIL  + HL + K   +   E  + GKQ +V+F
Sbjct: 415  SKELWHRRLGHMSEKGLEIL-AKDHLPNIKGQPLESCEDCLAGKQHRVSF 463


>CDP17738.1 unnamed protein product [Coffea canephora]
          Length = 798

 Score =  127 bits (319), Expect = 1e-26
 Identities = 88/261 (33%), Positives = 134/261 (51%), Gaps = 10/261 (3%)
 Frame = +3

Query: 93  KKGRSKSRPNVRK--CYNCHEGGHLIKDCPKPKKNQHHVYD-NVAVCEDNLGDIFMINNI 263
           ++G SKS   V K  C  C E GH  KDCPK KK      D NVA C+ +    F +   
Sbjct: 241 RRGWSKSISRVAKDECAFCREKGHWKKDCPKLKKKGKAPQDVNVAECKSDAESDFSL--- 297

Query: 264 CNYPSLNNILSDPLCDSDWLVDSGSTFHVTPYKHMFLNYKEIEHGFMCTANSKNYNVIGI 443
               +++ + S P    +W++DS  T+H+TP +  F  ++E++ GF+   N      +GI
Sbjct: 298 ----AVSRLTSHP---DEWILDSTCTYHMTPMREWFFEFEELDGGFVYMGNDNPCKTVGI 350

Query: 444 *DVCLRFSSGFEFTLKNVRHVPELRYNLLSCASLEDVGLEGKWGKGVMKIRKGSLVILTA 623
             + LR   G    LK+VR+VP L+ +L+S   LE  GLE +   G++K+  G+L++L  
Sbjct: 351 GSIKLRNHDGSTRILKDVRYVPNLKRSLISLGLLESKGLEVRMRDGILKVTSGALLMLKG 410

Query: 624 VKKNNLY------VCHAEPVGTSMNIIID-DKSIF*NNRLGHKSDRRLEILHNRSHLSSD 782
           V+KNNLY      V     V TS +   D + +   + RLG   ++ L+ L  +  L   
Sbjct: 411 VRKNNLYYYQGSTVVGTAAVATSSSSKKDAEATKLWHMRLGDAGEKSLQNLAKQGLLKGT 470

Query: 783 KLPFIPLDEPYVIGKQRKVTF 845
           K+  +   E  V+ KQRKV F
Sbjct: 471 KVCKLEFCEHCVLEKQRKVKF 491


>AAV88069.1 hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score =  127 bits (320), Expect = 1e-26
 Identities = 97/318 (30%), Positives = 153/318 (48%), Gaps = 23/318 (7%)
 Frame = +3

Query: 15   RGRSQDRFNAQKNAGYGEYREKNTYT-KKGRSKSRPNVR------KCYNCHEGGHLIKDC 173
            R RSQD   +Q +    + R +N    ++GR KSR   R      +C+ C +  H+ K  
Sbjct: 185  RRRSQDTSTSQSDILVTDDRGRNKQKGQRGRDKSRSKSRSRYKDIECHYCGKKSHIKKYS 244

Query: 174  PKPKKNQHHVY--------------DNVAVCEDNLGDIFMINNICNYPSLNNILSDPLCD 311
             K K+ +                  D +  C+DN+     IN  C+             +
Sbjct: 245  FKWKREKKQDNKDGDTGNQVATVRADLLVACDDNV-----INVACH-------------E 286

Query: 312  SDWLVDSGSTFHVTPYKHMFLNYKEIEHGFMCTANSKNYNVIGI*DVCLRFSSGFEFTLK 491
            + W+VDSG+ +HVTP K  F +Y   + G +   N     V G   VCL  S+G +  LK
Sbjct: 287  TTWIVDSGAAYHVTPRKEFFTSYTPGDFGELRMGNDGQVKVTGTGTVCLETSNGTKLVLK 346

Query: 492  NVRHVPELRYNLLSCASLEDVGLEGKWGKGVMKIRKGSLVILTAVKKNNLYVCHAEPVGT 671
            NV+H P++R NL+S   L+D G    +G G  KI KGSLV+    K +NLY   +     
Sbjct: 347  NVKHAPDIRLNLISTGKLDDDGFCCFFGDGHWKITKGSLVVARGNKSSNLYSLQSSVSDD 406

Query: 672  SMNIIIDD-KSIF*NNRLGHKSDRRLEILHNRSHLSSDKLPFIPLDEPYVIGKQRKVTFV 848
            S+N++  +  S   + RLGH S + ++ L  +S LS  K   +      + GKQR+V+F+
Sbjct: 407  SVNVVEKECASELWHKRLGHMSVKGIDYLAKKSKLSGVKEAKLDKCVHCLAGKQRRVSFM 466

Query: 849  NDAPS-EVEHVPVISNEV 899
            +  P+ + E + +I ++V
Sbjct: 467  SHPPTRKSEPLDLIHSDV 484


>KZV56298.1 hypothetical protein F511_00295 [Dorcoceras hygrometricum]
          Length = 1309

 Score =  127 bits (319), Expect = 2e-26
 Identities = 92/285 (32%), Positives = 140/285 (49%), Gaps = 5/285 (1%)
 Frame = +3

Query: 6   MHVRGRSQDRFNAQKNAGYGEYREKNTYTKKGRSKSRPNVR-KCYNCHEGGHLIKDCPKP 182
           ++VRGR+  R +  +  G            K RS+SR   + KC+ CH+ GH  KDCP  
Sbjct: 198 LNVRGRTYKRESRNEKGG------------KHRSQSRTRGKLKCFVCHKEGHFKKDCPDR 245

Query: 183 K-KNQHHVYDNVAVCEDNLGDIFMINNICNYPSLNNILSDPLCDSD-WLVDSGSTFHVTP 356
           + +N     D         GD  ++++   Y S   ++       D W++DSG +FH+ P
Sbjct: 246 RARNPERRKDP--------GDAAVVSD--GYESAEVLVVSRTNKQDCWVMDSGCSFHMCP 295

Query: 357 YKHMFLNYKEIEHGFMCTANSKNYNVIGI*DVCLRFSSGFEFTLKNVRHVPELRYNLLSC 536
            K  F N  E E G +   N++   V+GI  V L+   G   T+  VR+VP+LR NLLS 
Sbjct: 296 IKSWFQNLVEEESGHVLLGNNRECKVMGIGSVLLKMHDGCVRTITEVRYVPDLRRNLLSI 355

Query: 537 ASLEDVGLEGKWGKGVMKIRKGSLVILTAVKKNNLYVCHAEPVGTSMNIIID--DKSIF* 710
             L+  G   K   G MK+ KGSL ++   + N LY+  A  V  S N  +   +K+   
Sbjct: 356 GMLDSKGFNVKIEGGTMKVIKGSLTVMRGSQDNGLYILEASTVTGSSNAAVGGANKARLW 415

Query: 711 NNRLGHKSDRRLEILHNRSHLSSDKLPFIPLDEPYVIGKQRKVTF 845
           + RLGH S++ L  L  ++ L  DK+  +   +  V+GK  +V F
Sbjct: 416 HLRLGHVSEKGLVELSKQNLLGRDKVDDLSFCDECVLGKCSRVRF 460