BLASTX nr result

ID: Lithospermum23_contig00022954 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00022954
         (772 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CDP08691.1 unnamed protein product [Coffea canephora]                  62   2e-07
XP_018633798.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 31...    61   4e-07
XP_016456838.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 31...    61   4e-07
XP_009627713.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 31...    61   4e-07
XP_009757084.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 31...    59   3e-06
XP_019228186.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 31...    58   5e-06

>CDP08691.1 unnamed protein product [Coffea canephora]
          Length = 845

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 7/100 (7%)
 Frame = -1

Query: 571 SLKPIKSSTIIPIFSRVFP-----HKFRF--LSNRSLSFAPKARNINFNNSVVXXXXXXX 413
           S+ P+K +  +PIFSRVFP     H FRF  LS        + R  +F+++         
Sbjct: 3   SIPPLKPTRPVPIFSRVFPLRLKYHSFRFPILSTNGHDQEQQIRT-HFSST---RKLSTR 58

Query: 412 XXXXXXGHESVKSLVDDEADLSDWVSGLSSKDYAKTKLIS 293
                    S KSL++DEADLSDWVSGLSSK ++KT++ S
Sbjct: 59  GRTSSATRPSSKSLIEDEADLSDWVSGLSSKSFSKTQVFS 98


>XP_018633798.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like isoform X2
           [Nicotiana tomentosiformis]
          Length = 846

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
 Frame = -1

Query: 637 LIMLRYLQPSFPISHFH-IAMKPSLKPIKSSTIIPIFSRVFPHKFRFLSNRSLSFAP-KA 464
           L  LR+   +FP++HF  +    +LKP  +    P+FSR+FPHK ++   RS+ F    A
Sbjct: 6   LPQLRFFNSTFPVTHFPTMKCNSTLKPKTT----PVFSRMFPHKLKY---RSIGFPILPA 58

Query: 463 RNINFNNSVVXXXXXXXXXXXXXGHESVKSLVDDEADLSDWVSGLSSKDYAKTKLIS 293
           + +                         KSL++DEA+LSDWVSGL S  + KT++ S
Sbjct: 59  QQLELRRFSSRSGRSRPGSGSGHEVRISKSLIEDEAELSDWVSGLRSDSFKKTQVYS 115


>XP_016456838.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Nicotiana
           tabacum]
          Length = 875

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
 Frame = -1

Query: 637 LIMLRYLQPSFPISHFH-IAMKPSLKPIKSSTIIPIFSRVFPHKFRFLSNRSLSFAP-KA 464
           L  LR+   +FP++HF  +    +LKP  +    P+FSR+FPHK ++   RS+ F    A
Sbjct: 6   LPQLRFFNSTFPVTHFPTMKCNSTLKPKTT----PVFSRMFPHKLKY---RSIGFPILPA 58

Query: 463 RNINFNNSVVXXXXXXXXXXXXXGHESVKSLVDDEADLSDWVSGLSSKDYAKTKLIS 293
           + +                         KSL++DEA+LSDWVSGL S  + KT++ S
Sbjct: 59  QQLELRRFSSRSGRSRPGSGSGHEVRISKSLIEDEAELSDWVSGLRSDSFKKTQVYS 115


>XP_009627713.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like isoform X1
           [Nicotiana tomentosiformis]
          Length = 875

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
 Frame = -1

Query: 637 LIMLRYLQPSFPISHFH-IAMKPSLKPIKSSTIIPIFSRVFPHKFRFLSNRSLSFAP-KA 464
           L  LR+   +FP++HF  +    +LKP  +    P+FSR+FPHK ++   RS+ F    A
Sbjct: 6   LPQLRFFNSTFPVTHFPTMKCNSTLKPKTT----PVFSRMFPHKLKY---RSIGFPILPA 58

Query: 463 RNINFNNSVVXXXXXXXXXXXXXGHESVKSLVDDEADLSDWVSGLSSKDYAKTKLIS 293
           + +                         KSL++DEA+LSDWVSGL S  + KT++ S
Sbjct: 59  QQLELRRFSSRSGRSRPGSGSGHEVRISKSLIEDEAELSDWVSGLRSDSFKKTQVYS 115


>XP_009757084.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Nicotiana
           sylvestris] XP_016433848.1 PREDICTED: DEAD-box
           ATP-dependent RNA helicase 31-like [Nicotiana tabacum]
          Length = 873

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 43/118 (36%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
 Frame = -1

Query: 637 LIMLRYLQPSFPISHFH-IAMKPSLKPIKSSTIIPIFSRVFPHKFRFLSNRSLSFAPKAR 461
           L  LR+   +FP++HF  +    +LKP      +P FSR+FPHK ++   RS+ F P   
Sbjct: 6   LPQLRFFNSTFPVTHFPTMKCNSTLKP----KTVPAFSRMFPHKLKY---RSIGF-PILP 57

Query: 460 NINFNNSVVXXXXXXXXXXXXXGHES--VKSLVDDEADLSDWVSGLSSKDYAKTKLIS 293
                                 GHE    KSL++DEA+LSDWVSGL S  + KT++ S
Sbjct: 58  TQQQELRRFSSRSGRPRPGSGSGHEVRVSKSLIEDEAELSDWVSGLRSDSFKKTQVYS 115


>XP_019228186.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Nicotiana
           attenuata] OIT07413.1 dead-box atp-dependent rna
           helicase 31 [Nicotiana attenuata]
          Length = 875

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
 Frame = -1

Query: 637 LIMLRYLQPSFPISHFH-IAMKPSLKPIKSSTIIPIFSRVFPHKFRFLSNRSLSFAPKAR 461
           L  LR+   +FP++HF  +    +LKP      +P+ SR+FPHK ++   RS+ F P   
Sbjct: 6   LPQLRFFNSTFPVTHFPTMKCNSTLKP----KTVPVLSRMFPHKLKY---RSIGF-PILP 57

Query: 460 NINFNNSVVXXXXXXXXXXXXXGHES--VKSLVDDEADLSDWVSGLSSKDYAKTKLIS 293
                                 GHE    KSL++DEA+LSDWVSGL S  + KT++ S
Sbjct: 58  TQQQELRRFSSRSGRPRPGSGLGHEVRVSKSLIEDEAELSDWVSGLRSDSFKKTQVYS 115


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