BLASTX nr result
ID: Lithospermum23_contig00022951
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00022951
(2224 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_011094631.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 521 e-175
XP_019250683.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 517 e-173
CDP06761.1 unnamed protein product [Coffea canephora] 515 e-172
XP_018858063.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 515 e-172
XP_009794385.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 514 e-171
XP_018858062.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 513 e-171
XP_009621232.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 511 e-171
XP_016487689.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 511 e-170
AKC88770.1 sigma factor [Francoa sonchifolia] 509 e-170
XP_011094632.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 503 e-168
XP_009794392.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 501 e-167
XP_012485937.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 500 e-166
CBI32760.3 unnamed protein product, partial [Vitis vinifera] 500 e-166
XP_010653602.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 500 e-166
XP_015088005.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 498 e-166
XP_019077288.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 499 e-166
XP_010241845.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 498 e-166
XP_010325979.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 497 e-166
XP_015088004.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 498 e-165
XP_010241844.1 PREDICTED: RNA polymerase sigma factor sigF, chlo... 498 e-165
>XP_011094631.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1
[Sesamum indicum]
Length = 561
Score = 521 bits (1343), Expect = e-175
Identities = 286/535 (53%), Positives = 370/535 (69%), Gaps = 16/535 (2%)
Frame = +2
Query: 230 VLHEQVNSSFAAMPTASSTRYFPASVLIQEQREECKPLFHSVKEDKLFQ---------GL 382
+LH+QV + ++ T + R+ P SVL Q+Q E + + S KED +FQ +
Sbjct: 30 LLHDQVTPALTSLSTTLA-RHSPTSVLTQDQHNESRSMLCS-KEDSVFQLKQTLGMRQAV 87
Query: 383 VGTTSSSY--KDRLHSNQDMNDFQMQMLQWPASWYLLPSFETKKKL-SQSLILPSDPRES 553
+ SSS + +Q +N+FQ+Q+L+ P WYL PS +TK++L S ++ S+ E
Sbjct: 88 MAPASSSNDGNGNVDPDQYVNEFQLQLLRRPELWYLWPSLQTKEQLFSMTMESISNKNEK 147
Query: 554 TGQVELESVVQXXXXXXXXXXXXXXXVSDCKLIEADLKESLYPSILVSLSVEKEIMVRST 733
VE + VV V D +L A L +S SI V + VRST
Sbjct: 148 FIDVEADRVVALAREAFSACKEAAAIVKDAELFGARLDDS--SSIRSLTGVPAQRTVRST 205
Query: 734 RLHQRRSKNRRVP---IAVDETRLLEKQNPQRKKSEMVDQSDPLRLFL-SCGXXXXXXXX 901
RL +R+ K RRVP I V ET K QRK E D +DPLRLFL
Sbjct: 206 RLVERQMKRRRVPKPKIEVQETNHRRKPESQRKSDEGFDPNDPLRLFLRGPETRQLLTSK 265
Query: 902 XXXXXXXQIQALLKLQELRSRLKDEFARDPTFAEWAAACGLDCRKLKSELFSGQSSREKL 1081
+IQ L++LQE++SRLK +F+R+PT EWAAA G+ C+ L+S++ G SSR+KL
Sbjct: 266 EESELIVKIQELMRLQEMKSRLKVQFSREPTLVEWAAAAGISCQALQSQIHCGDSSRQKL 325
Query: 1082 IYANFRMVVHVAKQYQGRGLSLEDLLQQGSMGLMKSVEKFKPQAGCRFATYAYWWIRQGI 1261
I ANFRMVVH+AKQYQGRGLSL+DLLQ+GSMGLM+SVEKFKPQAGCRFATYAYWWIRQ I
Sbjct: 326 ICANFRMVVHIAKQYQGRGLSLQDLLQEGSMGLMRSVEKFKPQAGCRFATYAYWWIRQSI 385
Query: 1262 RKAIFHHSRTVRLPDNVYGLLSKVREAKRQCVKEGLHQPTKEQVASCAGLSVDKLNKLLY 1441
RKA+F HSRT+RLP+NVY LLS+V EAK+ C+++G H PTKE +A+CAG+SV+ L +LLY
Sbjct: 386 RKALFQHSRTIRLPENVYSLLSRVYEAKKLCIQQGNHLPTKEDIAACAGMSVEGLERLLY 445
Query: 1442 STRMPLSMQQPVWSDQDTTYQEVTSDNSIEVPDISLSKKLMRQHVRSLLNVLSPKERKII 1621
+ RMPLS+Q+PVW+DQDTT+QE+T+D +IEVPD+ ++K+LMRQH+R+LL+VLSP+ERKII
Sbjct: 446 TARMPLSLQKPVWTDQDTTFQEITADTTIEVPDVGVAKQLMRQHIRNLLSVLSPRERKII 505
Query: 1622 QLRFGIKDGSQKSLSEIGNVFGLSKERVRQLESRGLYKLKQHLSSHGLGAYAELL 1786
+LRFGI+ G QKSLSEIG FGLSKERVRQLESR LYKLKQ L SHGL AYA ++
Sbjct: 506 RLRFGIEHGEQKSLSEIGAGFGLSKERVRQLESRALYKLKQCLGSHGLAAYANMI 560
>XP_019250683.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Nicotiana
attenuata] OIT01336.1 rna polymerase sigma factor sigf,
chloroplastic [Nicotiana attenuata]
Length = 571
Score = 517 bits (1331), Expect = e-173
Identities = 279/537 (51%), Positives = 373/537 (69%), Gaps = 17/537 (3%)
Frame = +2
Query: 230 VLHEQVNSSFAAMPTASSTRYFPASVLIQEQREECKPLFHSVKEDKLFQGLVG------- 388
+L+E V +F ++P A R+ PASV+ EQ+ E + HSVKEDK +G
Sbjct: 35 MLYELVAPAFTSVPHAYLARHVPASVINPEQQFENRLQLHSVKEDKTSLATIGRRLVEAA 94
Query: 389 TTSSSYKDRLHSNQDMNDFQMQMLQWPASWYLLPSFETKKK--LSQSLILPSDPRESTGQ 562
+++ D + S Q++N Q+Q+L+ P YL S+ K+K L+ SD E
Sbjct: 95 SSAMEENDAVDSEQNINALQVQLLRSPGLSYLFSSYHIKEKGPLTLDTESLSDKGEKLMN 154
Query: 563 VELESVVQXXXXXXXXXXXXXXXVSDCKLIEADLKESLYPSILVSLSVEKEI----MVRS 730
E +VV D KL+ + +S++P++L + + ++ + RS
Sbjct: 155 FEPHNVVALARKALLASREAALLAKDSKLLGTNFDDSIFPNLLSTNLTDDKLKDQRIARS 214
Query: 731 TRLHQRRSKNRRVPIA---VDETRLLEKQNPQRKKSEMVDQSDPLRLFL-SCGXXXXXXX 898
TRL +RRSK R P + V ET E+ + +R+ +E +D +DPLR+FL
Sbjct: 215 TRLLERRSKKRGAPTSKHQVQETNRSERPDVRRRVNESIDLNDPLRMFLWGPETRQLLTV 274
Query: 899 XXXXXXXXQIQALLKLQELRSRLKDEFARDPTFAEWAAACGLDCRKLKSELFSGQSSREK 1078
+IQ +KLQE++ RL+ +F R+PT EWA A GL R+L+S+L SG+SSR+K
Sbjct: 275 KEESELIVKIQNTMKLQEVKHRLQTQFDREPTMIEWAEAAGLTSRELQSQLRSGKSSRDK 334
Query: 1079 LIYANFRMVVHVAKQYQGRGLSLEDLLQQGSMGLMKSVEKFKPQAGCRFATYAYWWIRQG 1258
LI AN RMVVH+AKQYQGRGLSL+DLLQ+GS+GLMKSVEKFKPQAGCRF TYAYWWIRQG
Sbjct: 335 LINANLRMVVHIAKQYQGRGLSLQDLLQEGSVGLMKSVEKFKPQAGCRFPTYAYWWIRQG 394
Query: 1259 IRKAIFHHSRTVRLPDNVYGLLSKVREAKRQCVKEGLHQPTKEQVASCAGLSVDKLNKLL 1438
+RKAIF HSRT+RLP+NVY LLSKV++AK+ C+++G H PT+E +ASCAG+SV++L LL
Sbjct: 395 VRKAIFQHSRTIRLPENVYALLSKVKDAKKLCIQQGNHHPTREDIASCAGMSVERLQSLL 454
Query: 1439 YSTRMPLSMQQPVWSDQDTTYQEVTSDNSIEVPDISLSKKLMRQHVRSLLNVLSPKERKI 1618
+ R PLSMQQ VW+DQDTT+QE+T+DN+IE P++S+SK+LMR+HVR+LLNVLSPKERKI
Sbjct: 455 SAARTPLSMQQLVWTDQDTTFQEITADNAIEAPELSVSKQLMRRHVRNLLNVLSPKERKI 514
Query: 1619 IQLRFGIKDGSQKSLSEIGNVFGLSKERVRQLESRGLYKLKQHLSSHGLGAYAELLF 1789
I+LRFGI DG +KSLSEIG VFGLSKERVRQLESR LY+LKQ+L+SHGL AY++LLF
Sbjct: 515 IRLRFGIGDGERKSLSEIGAVFGLSKERVRQLESRALYRLKQNLNSHGLDAYSDLLF 571
>CDP06761.1 unnamed protein product [Coffea canephora]
Length = 556
Score = 515 bits (1326), Expect = e-172
Identities = 279/532 (52%), Positives = 361/532 (67%), Gaps = 13/532 (2%)
Frame = +2
Query: 230 VLHEQVNSSFAAMPTASSTRYFPASVLIQEQREECKPLFHSVKEDKLFQGLVGTTSSSYK 409
VL E+V MP + YF S I EQ EE P +K D++ Q +
Sbjct: 35 VLREKVAPLLTRMPAVTVACYFATSTHISEQHEESGPSLRLMKYDRMSQATLDRRLIDAA 94
Query: 410 DRLHSNQDMND-------FQMQMLQWPASWYLLPSFETKKKLSQSLILPSDPRESTGQVE 568
+ D +D +++LQ P WYL S +T++ + PS P + T VE
Sbjct: 95 PSANQGSDTDDPDHLKSNSHVKLLQLPGLWYLFQSLDTRQSV------PSIPDDFT-DVE 147
Query: 569 LESVVQXXXXXXXXXXXXXXXVSDCKLIEADLKESLYPSILVSLS---VEKEIMVRSTRL 739
E+VV + KL A + ++L PS+L +L+ +EK+ V STRL
Sbjct: 148 AENVVALAKNALSASREAALLAENSKLFGASVDDTLSPSLLYALTDIPLEKKT-VHSTRL 206
Query: 740 HQRRSKNRRVP---IAVDETRLLEKQNPQRKKSEMVDQSDPLRLFLSCGXXXXXXXXXXX 910
QR+ K RRVP + V++TR + N QRK +++D PLR+FLS
Sbjct: 207 LQRQPKKRRVPKPKVEVEDTRPPVRPNLQRKAFDLID---PLRVFLSGPETKLLTVDEES 263
Query: 911 XXXXQIQALLKLQELRSRLKDEFARDPTFAEWAAACGLDCRKLKSELFSGQSSREKLIYA 1090
+IQ +K +E++SRL+ +F R+PT EWA A GL CR L+++L SG SREKLIYA
Sbjct: 264 ELIGKIQDWMKQEEVKSRLQSQFNREPTLVEWAEAAGLSCRALQTQLHSGNRSREKLIYA 323
Query: 1091 NFRMVVHVAKQYQGRGLSLEDLLQQGSMGLMKSVEKFKPQAGCRFATYAYWWIRQGIRKA 1270
N RMVVH+A+QY GRGLSL+DLLQ+GSMGLM+S+EKFKPQ GCRFATYAYWWIRQ IRKA
Sbjct: 324 NHRMVVHIARQYMGRGLSLQDLLQEGSMGLMRSIEKFKPQVGCRFATYAYWWIRQAIRKA 383
Query: 1271 IFHHSRTVRLPDNVYGLLSKVREAKRQCVKEGLHQPTKEQVASCAGLSVDKLNKLLYSTR 1450
IF HSRT+RLPDNVYGLLSKV+EAK+ C+++G+H PTKE++ASCAG++V+KL KLL++ R
Sbjct: 384 IFQHSRTIRLPDNVYGLLSKVKEAKKLCIQQGIHSPTKEEIASCAGITVEKLEKLLFTAR 443
Query: 1451 MPLSMQQPVWSDQDTTYQEVTSDNSIEVPDISLSKKLMRQHVRSLLNVLSPKERKIIQLR 1630
MPLSMQQPVW DQDTT+QEVT+D +IE D+S+SK+LMR H+R+LL +L+PKERKII+LR
Sbjct: 444 MPLSMQQPVWMDQDTTFQEVTADTAIEASDLSVSKQLMRIHIRNLLRILNPKERKIIRLR 503
Query: 1631 FGIKDGSQKSLSEIGNVFGLSKERVRQLESRGLYKLKQHLSSHGLGAYAELL 1786
FGI+DG QKSLSEIG VFGLSKERVRQLE+R LYKLKQ L+S GL AYA++L
Sbjct: 504 FGIEDGKQKSLSEIGAVFGLSKERVRQLETRALYKLKQCLNSQGLNAYADML 555
>XP_018858063.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2
[Juglans regia]
Length = 570
Score = 515 bits (1327), Expect = e-172
Identities = 279/534 (52%), Positives = 364/534 (68%), Gaps = 15/534 (2%)
Frame = +2
Query: 230 VLHEQVNSSFAAMPTASSTRYFPASVLIQEQREECKPLFHSVKEDKLFQGLV-------G 388
+LHEQ S +M + + + AS+ +QEQR+E PL H KED + G++ G
Sbjct: 36 MLHEQAASVVTSMLSTCTPQRRRASIPLQEQRDENDPLLHVFKEDAMSWGILERTWIVAG 95
Query: 389 TTSSSYKDRLHSNQDMNDFQMQMLQWPASWYLLPSFETKKKLSQSLILPSDPRESTGQVE 568
+ + K +SNQ ++DF+ Q+L WP L P +T K +S SL + P + ++
Sbjct: 96 ASVNEEKIPENSNQLLHDFERQLLHWPGLGQLSPPLQTGKTMSSSLSMQPIPASTENPMD 155
Query: 569 LES--VVQXXXXXXXXXXXXXXXVSDCKLIEADLKESLYPS----ILVSLSVEKEIMVRS 730
+E +V D KLI +D ESL I V++ +E+E +VRS
Sbjct: 156 VEECDIVALAKKALSASQEAALLAEDSKLIGSDFDESLSSGFGSRIFVNIPLEEEKVVRS 215
Query: 731 TRLHQRRSKNRRVPIA-VDETRLLEKQNPQRKKSEMVDQSDPLRLFL-SCGXXXXXXXXX 904
TR+ +RRSK RRVP + V E + +RK SE D +DPLRLFL
Sbjct: 216 TRILERRSKKRRVPKSNVHENHSSRNVDVKRKISEGFDPNDPLRLFLWGPETKQLLTFEE 275
Query: 905 XXXXXXQIQALLKLQELRSRLKDEFARDPTFAEWAAACGLDCRKLKSELFSGQSSREKLI 1084
Q+Q LLKL+E++ RL+ F R+PT EWA GL R LKS L+SG SSREKLI
Sbjct: 276 ESELIAQVQDLLKLEEVKIRLQSHFGREPTLVEWAEGVGLSYRALKSRLYSGNSSREKLI 335
Query: 1085 YANFRMVVHVAKQYQGRGLSLEDLLQQGSMGLMKSVEKFKPQAGCRFATYAYWWIRQGIR 1264
YAN RMVVHVAK Y GRGLS +DLLQ+GSMGLMKSVEKFKPQ+GCRFATYAYWWIRQ IR
Sbjct: 336 YANLRMVVHVAKLYPGRGLSFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQSIR 395
Query: 1265 KAIFHHSRTVRLPDNVYGLLSKVREAKRQCVKEGLHQPTKEQVASCAGLSVDKLNKLLYS 1444
KAI+ HSRT+RLP+NV+ LL K+ E+KR ++EG H PTKE++A G++V+KL KLLY+
Sbjct: 396 KAIYQHSRTIRLPENVHALLGKMMESKRLLIQEGNHHPTKEELARHVGITVNKLEKLLYT 455
Query: 1445 TRMPLSMQQPVWSDQDTTYQEVTSDNSIEVPDISLSKKLMRQHVRSLLNVLSPKERKIIQ 1624
TR+PLSMQ+PVW+DQDTT+QE+T+D +E+P++S++KKLMRQH R+LL++LSP+ER+II+
Sbjct: 456 TRLPLSMQRPVWTDQDTTFQEITADTEVEIPEVSVAKKLMRQHARNLLSILSPRERRIIR 515
Query: 1625 LRFGIKDGSQKSLSEIGNVFGLSKERVRQLESRGLYKLKQHLSSHGLGAYAELL 1786
LRFGI+DG QKSLSEIGN+FGLSKERVRQLE+R L++LKQ L S GL AY ELL
Sbjct: 516 LRFGIEDGKQKSLSEIGNLFGLSKERVRQLENRALHRLKQCLGSEGLVAYTELL 569
>XP_009794385.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1
[Nicotiana sylvestris] XP_016467962.1 PREDICTED: RNA
polymerase sigma factor sigF, chloroplastic-like isoform
X1 [Nicotiana tabacum]
Length = 572
Score = 514 bits (1323), Expect = e-171
Identities = 280/537 (52%), Positives = 374/537 (69%), Gaps = 17/537 (3%)
Frame = +2
Query: 230 VLHEQVNSSFAAMPTASSTRYFPASVLIQEQREECKPLFHSVKEDK-----LFQGLVGTT 394
+L+E V + ++P A R+ PASV+ EQ+ E + HSVKE+K + + LV
Sbjct: 36 MLYEHVAPALTSVPHAYLVRHVPASVINPEQQFENRLQLHSVKEEKTSLATIDRRLVEAA 95
Query: 395 SSSYK--DRLHSNQDMNDFQMQMLQWPASWYLLPSFETKKKLSQSLILPS--DPRESTGQ 562
SS+ + D + S Q++N Q+Q+L+ P YL S+ K+K+ +L S D E
Sbjct: 96 SSAMEENDAVDSEQNINALQVQLLRSPGLSYLFSSYHLKEKVPLTLDTESLSDKGEKLMN 155
Query: 563 VELESVVQXXXXXXXXXXXXXXXVSDCKLIEADLKESLYPSILVSLSVEKEI----MVRS 730
E +VV D KL+ + +S++P++L + + ++ + RS
Sbjct: 156 FEPHNVVALARKALLASREAALLAEDSKLLGTNFDDSIFPNLLSTNLTDDKLKDQRIARS 215
Query: 731 TRLHQRRSKNRRVPIA---VDETRLLEKQNPQRKKSEMVDQSDPLRLFL-SCGXXXXXXX 898
TRL +RRSK R P + V ET E+ + +R+ +E +D +DPLR+FL
Sbjct: 216 TRLLERRSKKRGAPTSKHQVQETNRSERPDVRRRVNESIDLNDPLRMFLWGPETRQLLTV 275
Query: 899 XXXXXXXXQIQALLKLQELRSRLKDEFARDPTFAEWAAACGLDCRKLKSELFSGQSSREK 1078
+IQ +KLQE++ RL+ +F R+PT EWA A GL R+L+S+L SG+SSR+K
Sbjct: 276 KEESELIVKIQNTMKLQEVKHRLQTQFDREPTLIEWAEAAGLTSRELQSQLRSGKSSRDK 335
Query: 1079 LIYANFRMVVHVAKQYQGRGLSLEDLLQQGSMGLMKSVEKFKPQAGCRFATYAYWWIRQG 1258
LI AN RMVVH+AKQYQGRGLSL+DLLQ+GS+GLMKSVEKFKPQAGCRF TYAYWWIRQG
Sbjct: 336 LINANLRMVVHIAKQYQGRGLSLQDLLQEGSVGLMKSVEKFKPQAGCRFPTYAYWWIRQG 395
Query: 1259 IRKAIFHHSRTVRLPDNVYGLLSKVREAKRQCVKEGLHQPTKEQVASCAGLSVDKLNKLL 1438
+RKAIF HSRT+RLP+NVY LLSKV++AK+ C+++G H PT+E +ASCAG+SV++L LL
Sbjct: 396 VRKAIFQHSRTIRLPENVYALLSKVKDAKKLCIQQGNHHPTREDIASCAGMSVERLQSLL 455
Query: 1439 YSTRMPLSMQQPVWSDQDTTYQEVTSDNSIEVPDISLSKKLMRQHVRSLLNVLSPKERKI 1618
+ R PLSMQQ VW+DQD T+QE+T+DN+IE P++S+SK+LMR+HVR+LLNVLSPKERKI
Sbjct: 456 SAARTPLSMQQSVWTDQDATFQEITADNAIEAPELSVSKQLMRRHVRNLLNVLSPKERKI 515
Query: 1619 IQLRFGIKDGSQKSLSEIGNVFGLSKERVRQLESRGLYKLKQHLSSHGLGAYAELLF 1789
I+LRFGI DG +KSLSEIG VFGLSKERVRQLESR LY+LKQ+LSSHGL AY +LLF
Sbjct: 516 IRLRFGIGDGERKSLSEIGAVFGLSKERVRQLESRALYRLKQNLSSHGLDAYNDLLF 572
>XP_018858062.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1
[Juglans regia]
Length = 575
Score = 513 bits (1321), Expect = e-171
Identities = 281/539 (52%), Positives = 365/539 (67%), Gaps = 20/539 (3%)
Frame = +2
Query: 230 VLHEQVNSSFAAMPTASSTRYFPASVLIQEQREECKPLFHSVKEDK-----LFQGLV--- 385
+LHEQ S +M + + + AS+ +QEQR+E PL H KED LF G++
Sbjct: 36 MLHEQAASVVTSMLSTCTPQRRRASIPLQEQRDENDPLLHVFKEDAMSWVGLFLGILERT 95
Query: 386 ----GTTSSSYKDRLHSNQDMNDFQMQMLQWPASWYLLPSFETKKKLSQSLILPSDPRES 553
G + + K +SNQ ++DF+ Q+L WP L P +T K +S SL + P +
Sbjct: 96 WIVAGASVNEEKIPENSNQLLHDFERQLLHWPGLGQLSPPLQTGKTMSSSLSMQPIPAST 155
Query: 554 TGQVELES--VVQXXXXXXXXXXXXXXXVSDCKLIEADLKESLYPS----ILVSLSVEKE 715
+++E +V D KLI +D ESL I V++ +E+E
Sbjct: 156 ENPMDVEECDIVALAKKALSASQEAALLAEDSKLIGSDFDESLSSGFGSRIFVNIPLEEE 215
Query: 716 IMVRSTRLHQRRSKNRRVPIA-VDETRLLEKQNPQRKKSEMVDQSDPLRLFL-SCGXXXX 889
+VRSTR+ +RRSK RRVP + V E + +RK SE D +DPLRLFL
Sbjct: 216 KVVRSTRILERRSKKRRVPKSNVHENHSSRNVDVKRKISEGFDPNDPLRLFLWGPETKQL 275
Query: 890 XXXXXXXXXXXQIQALLKLQELRSRLKDEFARDPTFAEWAAACGLDCRKLKSELFSGQSS 1069
Q+Q LLKL+E++ RL+ F R+PT EWA GL R LKS L+SG SS
Sbjct: 276 LTFEEESELIAQVQDLLKLEEVKIRLQSHFGREPTLVEWAEGVGLSYRALKSRLYSGNSS 335
Query: 1070 REKLIYANFRMVVHVAKQYQGRGLSLEDLLQQGSMGLMKSVEKFKPQAGCRFATYAYWWI 1249
REKLIYAN RMVVHVAK Y GRGLS +DLLQ+GSMGLMKSVEKFKPQ+GCRFATYAYWWI
Sbjct: 336 REKLIYANLRMVVHVAKLYPGRGLSFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWI 395
Query: 1250 RQGIRKAIFHHSRTVRLPDNVYGLLSKVREAKRQCVKEGLHQPTKEQVASCAGLSVDKLN 1429
RQ IRKAI+ HSRT+RLP+NV+ LL K+ E+KR ++EG H PTKE++A G++V+KL
Sbjct: 396 RQSIRKAIYQHSRTIRLPENVHALLGKMMESKRLLIQEGNHHPTKEELARHVGITVNKLE 455
Query: 1430 KLLYSTRMPLSMQQPVWSDQDTTYQEVTSDNSIEVPDISLSKKLMRQHVRSLLNVLSPKE 1609
KLLY+TR+PLSMQ+PVW+DQDTT+QE+T+D +E+P++S++KKLMRQH R+LL++LSP+E
Sbjct: 456 KLLYTTRLPLSMQRPVWTDQDTTFQEITADTEVEIPEVSVAKKLMRQHARNLLSILSPRE 515
Query: 1610 RKIIQLRFGIKDGSQKSLSEIGNVFGLSKERVRQLESRGLYKLKQHLSSHGLGAYAELL 1786
R+II+LRFGI+DG QKSLSEIGN+FGLSKERVRQLE+R L++LKQ L S GL AY ELL
Sbjct: 516 RRIIRLRFGIEDGKQKSLSEIGNLFGLSKERVRQLENRALHRLKQCLGSEGLVAYTELL 574
>XP_009621232.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Nicotiana
tomentosiformis]
Length = 544
Score = 511 bits (1315), Expect = e-171
Identities = 279/537 (51%), Positives = 372/537 (69%), Gaps = 17/537 (3%)
Frame = +2
Query: 230 VLHEQVNSSFAAMPTASSTRYFPASVLIQEQREECKPLFHSVKEDK-----LFQGLVGTT 394
+L+E V ++P A R+ PASV+ EQ+ E + H+VKE+K + + LV
Sbjct: 8 MLYEHVAPGLTSVPHAYLARHVPASVINPEQQFENRLQLHTVKEEKTSLATIDRRLVEAA 67
Query: 395 SSSYK--DRLHSNQDMNDFQMQMLQWPASWYLLPSFETKKK--LSQSLILPSDPRESTGQ 562
SS+ + D + S Q++N Q+Q+L+ P YL S+ K+K L+ SD E
Sbjct: 68 SSAMEENDAVDSEQNINALQVQLLRSPGLSYLFSSYHLKEKGPLTLDTESLSDKGEKLMN 127
Query: 563 VELESVVQXXXXXXXXXXXXXXXVSDCKLIEADLKESLYPSILVSLSVEKEIM----VRS 730
E ESVV D KL+E + +S++P++L + + ++ VRS
Sbjct: 128 FEPESVVALARKALLASREAALLAEDSKLLETNFDDSIFPNLLSTNLTDDKLKDQKTVRS 187
Query: 731 TRLHQRRSKNRRVPIA---VDETRLLEKQNPQRKKSEMVDQSDPLRLFL-SCGXXXXXXX 898
TR +RRSK R VP V ET E+ + +R+ E +D +DPLR+FL
Sbjct: 188 TRFLERRSKRRGVPTPKHQVQETNRSERPDVRRRVKESIDLNDPLRMFLWGPETKQLLTV 247
Query: 899 XXXXXXXXQIQALLKLQELRSRLKDEFARDPTFAEWAAACGLDCRKLKSELFSGQSSREK 1078
+IQ +KLQE++ RL+ +F R+PT EWA A GL R+L+S+L SG+SSR+K
Sbjct: 248 KEESELIVKIQNTMKLQEVKHRLQTQFDREPTLIEWAEAAGLTSRELQSQLRSGKSSRDK 307
Query: 1079 LIYANFRMVVHVAKQYQGRGLSLEDLLQQGSMGLMKSVEKFKPQAGCRFATYAYWWIRQG 1258
LI AN RMVVH+AKQYQGRGLSL+DLLQ+GS+GLMKSVEKFKPQAGCRF TYAYWWIRQG
Sbjct: 308 LINANLRMVVHIAKQYQGRGLSLQDLLQEGSVGLMKSVEKFKPQAGCRFPTYAYWWIRQG 367
Query: 1259 IRKAIFHHSRTVRLPDNVYGLLSKVREAKRQCVKEGLHQPTKEQVASCAGLSVDKLNKLL 1438
+RK IF HSRT+RLP+NVY LLSKV++AK+ C+++G PT+E +ASCAG+SV++L LL
Sbjct: 368 VRKTIFQHSRTIRLPENVYALLSKVKDAKKLCIQQGNRHPTREDIASCAGMSVERLQSLL 427
Query: 1439 YSTRMPLSMQQPVWSDQDTTYQEVTSDNSIEVPDISLSKKLMRQHVRSLLNVLSPKERKI 1618
+ R PLSMQQ VW+DQDTT+QE+T+D++IE P++S+SK+LMR+H+R+LLNVL+PKERKI
Sbjct: 428 SAARTPLSMQQSVWTDQDTTFQEITADSAIEAPELSVSKQLMRRHIRNLLNVLNPKERKI 487
Query: 1619 IQLRFGIKDGSQKSLSEIGNVFGLSKERVRQLESRGLYKLKQHLSSHGLGAYAELLF 1789
I+LRFGI DG +KSLSEIG VFGLSKERVRQLESR LYKLK++LSSHGL AY++LLF
Sbjct: 488 IRLRFGIGDGKRKSLSEIGAVFGLSKERVRQLESRALYKLKKNLSSHGLDAYSDLLF 544
>XP_016487689.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
[Nicotiana tabacum]
Length = 572
Score = 511 bits (1315), Expect = e-170
Identities = 279/537 (51%), Positives = 373/537 (69%), Gaps = 17/537 (3%)
Frame = +2
Query: 230 VLHEQVNSSFAAMPTASSTRYFPASVLIQEQREECKPLFHSVKEDK-----LFQGLVGTT 394
+L+E V ++P A R+ PASV+ EQ+ E + H+VK++K + + LV
Sbjct: 36 MLYEHVAPGLTSVPHAYLARHVPASVINPEQQFENRLQLHTVKKEKTSLATIDRRLVEAA 95
Query: 395 SSSYK--DRLHSNQDMNDFQMQMLQWPASWYLLPSFETKKKLSQSLILPS--DPRESTGQ 562
SS+ + D + S Q++N Q+Q+L+ P YL S+ K+K +L S D E
Sbjct: 96 SSAMEENDAVDSEQNINVLQVQLLRSPGLSYLFSSYHLKEKRPLTLDTESLSDKGEKLMN 155
Query: 563 VELESVVQXXXXXXXXXXXXXXXVSDCKLIEADLKESLYPSILVSLSVEKEIM----VRS 730
E ESVV D KL+E + +S++P++L + + ++ VRS
Sbjct: 156 FEPESVVALARKALLASREAALLAEDSKLLETNFDDSIFPNLLSTNLTDDKLKDQKTVRS 215
Query: 731 TRLHQRRSKNRRVPIA---VDETRLLEKQNPQRKKSEMVDQSDPLRLFL-SCGXXXXXXX 898
TR +RRSK R VP V ET E+ + +R+ E +D +DPLR+FL
Sbjct: 216 TRFLERRSKRRGVPTPKHQVQETNRSERPDVRRRVKESIDLNDPLRMFLWGPETKQLLTV 275
Query: 899 XXXXXXXXQIQALLKLQELRSRLKDEFARDPTFAEWAAACGLDCRKLKSELFSGQSSREK 1078
+IQ +KLQE++ RL+ +F R+PT EWA A GL R+L+S+L SG+SSR+K
Sbjct: 276 KEESELIVKIQNTMKLQEVKHRLQTQFDREPTLIEWAEAAGLTSRELQSQLRSGKSSRDK 335
Query: 1079 LIYANFRMVVHVAKQYQGRGLSLEDLLQQGSMGLMKSVEKFKPQAGCRFATYAYWWIRQG 1258
LI AN RMVVH+AKQYQGRGLSL+DLLQ+GS+GLMKSVEKFKPQAGCRF TYAYWWIRQG
Sbjct: 336 LINANLRMVVHIAKQYQGRGLSLQDLLQEGSVGLMKSVEKFKPQAGCRFPTYAYWWIRQG 395
Query: 1259 IRKAIFHHSRTVRLPDNVYGLLSKVREAKRQCVKEGLHQPTKEQVASCAGLSVDKLNKLL 1438
+RKAIF HSRT+RLP+NVY LLSKV++AK+ C+++G PT+E +ASCAG+SV++L LL
Sbjct: 396 VRKAIFQHSRTIRLPENVYALLSKVKDAKKLCIQQGNRHPTREDIASCAGMSVERLQSLL 455
Query: 1439 YSTRMPLSMQQPVWSDQDTTYQEVTSDNSIEVPDISLSKKLMRQHVRSLLNVLSPKERKI 1618
+ R PLSMQQ VW+DQDTT+QE+T+D++IE P++S+SK+LMR+H+R+LLNVL+PKERKI
Sbjct: 456 SAARTPLSMQQSVWTDQDTTFQEITADSAIEAPELSVSKQLMRRHIRNLLNVLNPKERKI 515
Query: 1619 IQLRFGIKDGSQKSLSEIGNVFGLSKERVRQLESRGLYKLKQHLSSHGLGAYAELLF 1789
I+LRFGI DG +KSLSEIG VFGLSKERVRQLESR LYKLK++LSSHGL AY++LLF
Sbjct: 516 IRLRFGIGDGKRKSLSEIGAVFGLSKERVRQLESRALYKLKKNLSSHGLDAYSDLLF 572
>AKC88770.1 sigma factor [Francoa sonchifolia]
Length = 549
Score = 509 bits (1312), Expect = e-170
Identities = 277/524 (52%), Positives = 355/524 (67%), Gaps = 16/524 (3%)
Frame = +2
Query: 263 AMPTASSTRYFPASVLIQEQREECKPLFHSVKEDK-------LFQGLVGTTSSSYKDRLH 421
+MPT S R FP SVL++EQREE + L H +KE++ + Q L G D +
Sbjct: 27 SMPTTSLARNFPTSVLLREQREEYRVLCHILKEERTSEATLDMRQMLNGAVQEEISD--N 84
Query: 422 SNQDMNDFQMQMLQWPASWYLLPSFETKKKLSQSL----ILPSDPRESTGQVELESVVQX 589
S+Q + DF+ ++LQWP W + PS +T S SL + P+ E + E
Sbjct: 85 SDQLVQDFERRLLQWPGLWPIFPSLQTGGSPSSSLAMQPVTPTTDGEKSAGTESCLAAAL 144
Query: 590 XXXXXXXXXXXXXXVSDCKLIEAD----LKESLYPSILVSLSVEKEIMVRSTRLHQRRSK 757
+++ KL + SL P+ LVS+ ++K +VRSTRL +RRSK
Sbjct: 145 AMKSLSASKQAAPLLNESKLARVNGDGLPAPSLDPASLVSVPLDKVRIVRSTRLLERRSK 204
Query: 758 NRRVPIAVDETRLLEKQNPQRKKSEMVDQSDPLRLFL-SCGXXXXXXXXXXXXXXXQIQA 934
R + V ET + + +RK SE D +DPLR+FL IQ
Sbjct: 205 KRVPKVGVHETFHSRRTDIKRKSSEGFDPNDPLRMFLWGPETKQLLTAKEEFELIDHIQD 264
Query: 935 LLKLQELRSRLKDEFARDPTFAEWAAACGLDCRKLKSELFSGQSSREKLIYANFRMVVHV 1114
++KL+E++SRL +F +PT EWA A G+ CR L+S+L + SREKLI AN RMVVH+
Sbjct: 265 MMKLEEVKSRLLSQFGHEPTLIEWAEAAGISCRVLQSQLRTANKSREKLINANLRMVVHI 324
Query: 1115 AKQYQGRGLSLEDLLQQGSMGLMKSVEKFKPQAGCRFATYAYWWIRQGIRKAIFHHSRTV 1294
AKQY G+GLS DLLQ+GSMGLMKSVEKFKPQAGCRFATYAYWWIRQ +RKAIF HSRT+
Sbjct: 325 AKQYLGKGLSFPDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRTI 384
Query: 1295 RLPDNVYGLLSKVREAKRQCVKEGLHQPTKEQVASCAGLSVDKLNKLLYSTRMPLSMQQP 1474
RLP+NVY LL KV EAK+ C++EG H+PTKE++A G++V+KL KLLY+TRMPLSMQQP
Sbjct: 385 RLPENVYTLLGKVLEAKKSCIQEGNHRPTKEELARRVGITVEKLEKLLYTTRMPLSMQQP 444
Query: 1475 VWSDQDTTYQEVTSDNSIEVPDISLSKKLMRQHVRSLLNVLSPKERKIIQLRFGIKDGSQ 1654
VW+ QDTT+QE+ +D IE+PDIS+ K++MRQHVR+LL++LSPKER+II+LRFGI+DG Q
Sbjct: 445 VWAGQDTTFQEIIADTEIEIPDISVGKQMMRQHVRNLLSILSPKERRIIRLRFGIEDGKQ 504
Query: 1655 KSLSEIGNVFGLSKERVRQLESRGLYKLKQHLSSHGLGAYAELL 1786
KSLSEIG VFGLSKERVRQLESR LY+LKQ LSS GLGAY +LL
Sbjct: 505 KSLSEIGAVFGLSKERVRQLESRALYRLKQCLSSQGLGAYTDLL 548
>XP_011094632.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2
[Sesamum indicum] XP_011094633.1 PREDICTED: RNA
polymerase sigma factor sigF, chloroplastic isoform X2
[Sesamum indicum]
Length = 496
Score = 503 bits (1294), Expect = e-168
Identities = 272/493 (55%), Positives = 346/493 (70%), Gaps = 16/493 (3%)
Frame = +2
Query: 356 KEDKLFQ---------GLVGTTSSSY--KDRLHSNQDMNDFQMQMLQWPASWYLLPSFET 502
KED +FQ ++ SSS + +Q +N+FQ+Q+L+ P WYL PS +T
Sbjct: 5 KEDSVFQLKQTLGMRQAVMAPASSSNDGNGNVDPDQYVNEFQLQLLRRPELWYLWPSLQT 64
Query: 503 KKKL-SQSLILPSDPRESTGQVELESVVQXXXXXXXXXXXXXXXVSDCKLIEADLKESLY 679
K++L S ++ S+ E VE + VV V D +L A L +S
Sbjct: 65 KEQLFSMTMESISNKNEKFIDVEADRVVALAREAFSACKEAAAIVKDAELFGARLDDS-- 122
Query: 680 PSILVSLSVEKEIMVRSTRLHQRRSKNRRVP---IAVDETRLLEKQNPQRKKSEMVDQSD 850
SI V + VRSTRL +R+ K RRVP I V ET K QRK E D +D
Sbjct: 123 SSIRSLTGVPAQRTVRSTRLVERQMKRRRVPKPKIEVQETNHRRKPESQRKSDEGFDPND 182
Query: 851 PLRLFL-SCGXXXXXXXXXXXXXXXQIQALLKLQELRSRLKDEFARDPTFAEWAAACGLD 1027
PLRLFL +IQ L++LQE++SRLK +F+R+PT EWAAA G+
Sbjct: 183 PLRLFLRGPETRQLLTSKEESELIVKIQELMRLQEMKSRLKVQFSREPTLVEWAAAAGIS 242
Query: 1028 CRKLKSELFSGQSSREKLIYANFRMVVHVAKQYQGRGLSLEDLLQQGSMGLMKSVEKFKP 1207
C+ L+S++ G SSR+KLI ANFRMVVH+AKQYQGRGLSL+DLLQ+GSMGLM+SVEKFKP
Sbjct: 243 CQALQSQIHCGDSSRQKLICANFRMVVHIAKQYQGRGLSLQDLLQEGSMGLMRSVEKFKP 302
Query: 1208 QAGCRFATYAYWWIRQGIRKAIFHHSRTVRLPDNVYGLLSKVREAKRQCVKEGLHQPTKE 1387
QAGCRFATYAYWWIRQ IRKA+F HSRT+RLP+NVY LLS+V EAK+ C+++G H PTKE
Sbjct: 303 QAGCRFATYAYWWIRQSIRKALFQHSRTIRLPENVYSLLSRVYEAKKLCIQQGNHLPTKE 362
Query: 1388 QVASCAGLSVDKLNKLLYSTRMPLSMQQPVWSDQDTTYQEVTSDNSIEVPDISLSKKLMR 1567
+A+CAG+SV+ L +LLY+ RMPLS+Q+PVW+DQDTT+QE+T+D +IEVPD+ ++K+LMR
Sbjct: 363 DIAACAGMSVEGLERLLYTARMPLSLQKPVWTDQDTTFQEITADTTIEVPDVGVAKQLMR 422
Query: 1568 QHVRSLLNVLSPKERKIIQLRFGIKDGSQKSLSEIGNVFGLSKERVRQLESRGLYKLKQH 1747
QH+R+LL+VLSP+ERKII+LRFGI+ G QKSLSEIG FGLSKERVRQLESR LYKLKQ
Sbjct: 423 QHIRNLLSVLSPRERKIIRLRFGIEHGEQKSLSEIGAGFGLSKERVRQLESRALYKLKQC 482
Query: 1748 LSSHGLGAYAELL 1786
L SHGL AYA ++
Sbjct: 483 LGSHGLAAYANMI 495
>XP_009794392.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2
[Nicotiana sylvestris] XP_016467963.1 PREDICTED: RNA
polymerase sigma factor sigF, chloroplastic-like isoform
X2 [Nicotiana tabacum]
Length = 545
Score = 501 bits (1289), Expect = e-167
Identities = 274/521 (52%), Positives = 363/521 (69%), Gaps = 17/521 (3%)
Frame = +2
Query: 278 SSTRYFPASVLIQEQREECKPLFHSVKEDK-----LFQGLVGTTSSSYK--DRLHSNQDM 436
SS +SV+ EQ+ E + HSVKE+K + + LV SS+ + D + S Q++
Sbjct: 25 SSPSSISSSVINPEQQFENRLQLHSVKEEKTSLATIDRRLVEAASSAMEENDAVDSEQNI 84
Query: 437 NDFQMQMLQWPASWYLLPSFETKKKLSQSLILPS--DPRESTGQVELESVVQXXXXXXXX 610
N Q+Q+L+ P YL S+ K+K+ +L S D E E +VV
Sbjct: 85 NALQVQLLRSPGLSYLFSSYHLKEKVPLTLDTESLSDKGEKLMNFEPHNVVALARKALLA 144
Query: 611 XXXXXXXVSDCKLIEADLKESLYPSILVSLSVEKEI----MVRSTRLHQRRSKNRRVPIA 778
D KL+ + +S++P++L + + ++ + RSTRL +RRSK R P +
Sbjct: 145 SREAALLAEDSKLLGTNFDDSIFPNLLSTNLTDDKLKDQRIARSTRLLERRSKKRGAPTS 204
Query: 779 ---VDETRLLEKQNPQRKKSEMVDQSDPLRLFL-SCGXXXXXXXXXXXXXXXQIQALLKL 946
V ET E+ + +R+ +E +D +DPLR+FL +IQ +KL
Sbjct: 205 KHQVQETNRSERPDVRRRVNESIDLNDPLRMFLWGPETRQLLTVKEESELIVKIQNTMKL 264
Query: 947 QELRSRLKDEFARDPTFAEWAAACGLDCRKLKSELFSGQSSREKLIYANFRMVVHVAKQY 1126
QE++ RL+ +F R+PT EWA A GL R+L+S+L SG+SSR+KLI AN RMVVH+AKQY
Sbjct: 265 QEVKHRLQTQFDREPTLIEWAEAAGLTSRELQSQLRSGKSSRDKLINANLRMVVHIAKQY 324
Query: 1127 QGRGLSLEDLLQQGSMGLMKSVEKFKPQAGCRFATYAYWWIRQGIRKAIFHHSRTVRLPD 1306
QGRGLSL+DLLQ+GS+GLMKSVEKFKPQAGCRF TYAYWWIRQG+RKAIF HSRT+RLP+
Sbjct: 325 QGRGLSLQDLLQEGSVGLMKSVEKFKPQAGCRFPTYAYWWIRQGVRKAIFQHSRTIRLPE 384
Query: 1307 NVYGLLSKVREAKRQCVKEGLHQPTKEQVASCAGLSVDKLNKLLYSTRMPLSMQQPVWSD 1486
NVY LLSKV++AK+ C+++G H PT+E +ASCAG+SV++L LL + R PLSMQQ VW+D
Sbjct: 385 NVYALLSKVKDAKKLCIQQGNHHPTREDIASCAGMSVERLQSLLSAARTPLSMQQSVWTD 444
Query: 1487 QDTTYQEVTSDNSIEVPDISLSKKLMRQHVRSLLNVLSPKERKIIQLRFGIKDGSQKSLS 1666
QD T+QE+T+DN+IE P++S+SK+LMR+HVR+LLNVLSPKERKII+LRFGI DG +KSLS
Sbjct: 445 QDATFQEITADNAIEAPELSVSKQLMRRHVRNLLNVLSPKERKIIRLRFGIGDGERKSLS 504
Query: 1667 EIGNVFGLSKERVRQLESRGLYKLKQHLSSHGLGAYAELLF 1789
EIG VFGLSKERVRQLESR LY+LKQ+LSSHGL AY +LLF
Sbjct: 505 EIGAVFGLSKERVRQLESRALYRLKQNLSSHGLDAYNDLLF 545
>XP_012485937.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X1 [Gossypium raimondii] KJB36541.1 hypothetical
protein B456_006G165200 [Gossypium raimondii]
Length = 564
Score = 500 bits (1288), Expect = e-166
Identities = 276/530 (52%), Positives = 356/530 (67%), Gaps = 11/530 (2%)
Frame = +2
Query: 230 VLHEQVNSSFA-AMPTASSTRYFPASVLIQEQREECKPL--FHSVKEDKLFQGLVGTTSS 400
+ HEQ ++ A ++P S R+FP SVL QEQR++C+PL KEDK + G
Sbjct: 34 MFHEQAAAAAATSIPIHSVARHFPTSVLSQEQRDDCRPLPILQYFKEDKAYPGPTDKQQV 93
Query: 401 SYKDRLHSNQDMNDFQMQMLQWPASWYLLPSFETKKKLSQSLILPS--DPRESTGQVELE 574
LH + N+F+ QMLQWP LL E + S SL + S E T VE
Sbjct: 94 ENGTTLHEGKASNNFEQQMLQWPDLRQLLSVLELGENPSSSLNMQSVAADTEETMNVEPS 153
Query: 575 SVVQXXXXXXXXXXXXXXXVSDCKL-IEADLKESLYPSILVSLSVEKEIM--VRSTRLHQ 745
+++ D KL ++ L SL + +L VE+E VRSTR +
Sbjct: 154 TILALAKNALSASKQALALAEDLKLDLDDSLSNSLGSANSSTLPVEEEEAPTVRSTRRLE 213
Query: 746 RRSKNRRVP--IAVDETRLLEKQNPQRKKSEMVDQSDPLRLFL-SCGXXXXXXXXXXXXX 916
R+SK RR+P + +T L K N ++K S D +DPLRLFL
Sbjct: 214 RQSKRRRMPSKFMISDTYSLRKTNVRKKVSGSYDPNDPLRLFLRGPETTQLLTAKEESEL 273
Query: 917 XXQIQALLKLQELRSRLKDEFARDPTFAEWAAACGLDCRKLKSELFSGQSSREKLIYANF 1096
++Q L++L++L+S L+ +F R+PT EWA A GL C L++EL +G SREKL+YANF
Sbjct: 274 IVEVQDLMRLEKLKSNLQSQFGREPTLVEWAEAIGLSCSALQAELHNGNRSREKLVYANF 333
Query: 1097 RMVVHVAKQYQGRGLSLEDLLQQGSMGLMKSVEKFKPQAGCRFATYAYWWIRQGIRKAIF 1276
RMV HVAKQYQGRG++L+DLLQ+GSMGL+KSVEKFKPQ GCRFATY+YWWIRQ I K+I
Sbjct: 334 RMVFHVAKQYQGRGMNLQDLLQEGSMGLIKSVEKFKPQVGCRFATYSYWWIRQTITKSIV 393
Query: 1277 HHSRTVRLPDNVYGLLSKVREAKRQCVKEGLHQPTKEQVASCAGLSVDKLNKLLYSTRMP 1456
HSRT+RLP+N Y LL KV +AKR ++EG H P+KE++A+ AG++V KL+KLL++TR P
Sbjct: 394 QHSRTIRLPENAYSLLGKVVKAKRSYIQEGNHCPSKEELATRAGITVQKLDKLLFTTRTP 453
Query: 1457 LSMQQPVWSDQDTTYQEVTSDNSIEVPDISLSKKLMRQHVRSLLNVLSPKERKIIQLRFG 1636
LSMQQPVW+DQDTT+QEVT D IE+PD+S++K+LMRQHVR+LL VLSPKERKII+LRFG
Sbjct: 454 LSMQQPVWTDQDTTFQEVTPDTGIEIPDVSVAKQLMRQHVRNLLRVLSPKERKIIKLRFG 513
Query: 1637 IKDGSQKSLSEIGNVFGLSKERVRQLESRGLYKLKQHLSSHGLGAYAELL 1786
I++ + SLSEIGN+FGLSKERVRQLESR LYKLKQ L GLGAYA+LL
Sbjct: 514 IEESKENSLSEIGNIFGLSKERVRQLESRALYKLKQCLVKQGLGAYADLL 563
>CBI32760.3 unnamed protein product, partial [Vitis vinifera]
Length = 561
Score = 500 bits (1287), Expect = e-166
Identities = 275/533 (51%), Positives = 363/533 (68%), Gaps = 14/533 (2%)
Frame = +2
Query: 230 VLHEQVNSSFAAMPTASSTRYFPASVLIQEQREECKPLFHSVKEDKLFQGLVG------T 391
+LH+QV + A++PT + R FP SVL+QEQR+E +P ++K+++ FQ +
Sbjct: 29 MLHDQVAPAVASIPTTIA-RKFPTSVLLQEQRDEYRPFPQALKDERTFQATLEKRQMEIV 87
Query: 392 TSSSYKDRLHSNQDMNDFQMQMLQWPASWYLLPSFETKKKLS-QSLILPSDPRESTGQVE 568
S+ ++ NQ M +F+ Q+L P WY LPS +T +K S I+ S + ++
Sbjct: 88 VSADEENSDDHNQYMVNFERQLLLQPGLWYSLPSSQTGEKSPFSSSIMKSITTDIENSMD 147
Query: 569 LE--SVVQXXXXXXXXXXXXXXXVSDCKLIEADLKESLYPSILVSLSVE---KEIMVRST 733
++ V+ + KL+ ADL++S PS+ S +E VRST
Sbjct: 148 VKPCDVLALAKKALSASKQAVSLYENAKLLGADLEDSPSPSLGAISSPNLPLEEKTVRST 207
Query: 734 RLHQRRSKNRRVP-IAVDETRLLEKQNPQRKKSEMVDQSDPLRLFL-SCGXXXXXXXXXX 907
RL +RRSK RR P +AV E + QRK +E D DPLRLFL
Sbjct: 208 RLLERRSKKRRNPKVAVHENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEE 267
Query: 908 XXXXXQIQALLKLQELRSRLKDEFARDPTFAEWAAACGLDCRKLKSELFSGQSSREKLIY 1087
QIQ L++L+E++ RL+ R+PT EWA A GL C+ L+S+L SG SR+KLIY
Sbjct: 268 SELIVQIQELMRLEEVKKRLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIY 327
Query: 1088 ANFRMVVHVAKQYQGRGLSLEDLLQQGSMGLMKSVEKFKPQAGCRFATYAYWWIRQGIRK 1267
AN RMVVH+AKQYQGRGL+L+DLLQ+GSMGLM SVEKFKP AGCRFA+YAYWWIRQ +RK
Sbjct: 328 ANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRK 387
Query: 1268 AIFHHSRTVRLPDNVYGLLSKVREAKRQCVKEGLHQPTKEQVASCAGLSVDKLNKLLYST 1447
AIF HSRT+RLP+N+Y LL KV+EAKR ++EG H PTKE++A G++++KL +LL T
Sbjct: 388 AIFQHSRTIRLPENMYSLLGKVKEAKRLFIQEGHHDPTKEEIAERVGITIEKLQRLLLHT 447
Query: 1448 RMPLSMQQPVWSDQDTTYQEVTSDNSIEVPDISLSKKLMRQHVRSLLNVLSPKERKIIQL 1627
RMPLSMQQPVW+DQDTT+QEVT+D IE+PD+S++K+LMRQHVR+LL+VL+PKER+II+L
Sbjct: 448 RMPLSMQQPVWADQDTTFQEVTADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRL 507
Query: 1628 RFGIKDGSQKSLSEIGNVFGLSKERVRQLESRGLYKLKQHLSSHGLGAYAELL 1786
RFGI DG ++LSEIG VFG SKERVRQLE R L+KLKQ LSSHGL +Y +LL
Sbjct: 508 RFGIGDGIPRTLSEIGLVFGFSKERVRQLEQRALHKLKQCLSSHGLESYTDLL 560
>XP_010653602.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1
[Vitis vinifera]
Length = 567
Score = 500 bits (1287), Expect = e-166
Identities = 275/533 (51%), Positives = 363/533 (68%), Gaps = 14/533 (2%)
Frame = +2
Query: 230 VLHEQVNSSFAAMPTASSTRYFPASVLIQEQREECKPLFHSVKEDKLFQGLVG------T 391
+LH+QV + A++PT + R FP SVL+QEQR+E +P ++K+++ FQ +
Sbjct: 35 MLHDQVAPAVASIPTTIA-RKFPTSVLLQEQRDEYRPFPQALKDERTFQATLEKRQMEIV 93
Query: 392 TSSSYKDRLHSNQDMNDFQMQMLQWPASWYLLPSFETKKKLS-QSLILPSDPRESTGQVE 568
S+ ++ NQ M +F+ Q+L P WY LPS +T +K S I+ S + ++
Sbjct: 94 VSADEENSDDHNQYMVNFERQLLLQPGLWYSLPSSQTGEKSPFSSSIMKSITTDIENSMD 153
Query: 569 LE--SVVQXXXXXXXXXXXXXXXVSDCKLIEADLKESLYPSILVSLSVE---KEIMVRST 733
++ V+ + KL+ ADL++S PS+ S +E VRST
Sbjct: 154 VKPCDVLALAKKALSASKQAVSLYENAKLLGADLEDSPSPSLGAISSPNLPLEEKTVRST 213
Query: 734 RLHQRRSKNRRVP-IAVDETRLLEKQNPQRKKSEMVDQSDPLRLFL-SCGXXXXXXXXXX 907
RL +RRSK RR P +AV E + QRK +E D DPLRLFL
Sbjct: 214 RLLERRSKKRRNPKVAVHENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEE 273
Query: 908 XXXXXQIQALLKLQELRSRLKDEFARDPTFAEWAAACGLDCRKLKSELFSGQSSREKLIY 1087
QIQ L++L+E++ RL+ R+PT EWA A GL C+ L+S+L SG SR+KLIY
Sbjct: 274 SELIVQIQELMRLEEVKKRLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIY 333
Query: 1088 ANFRMVVHVAKQYQGRGLSLEDLLQQGSMGLMKSVEKFKPQAGCRFATYAYWWIRQGIRK 1267
AN RMVVH+AKQYQGRGL+L+DLLQ+GSMGLM SVEKFKP AGCRFA+YAYWWIRQ +RK
Sbjct: 334 ANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRK 393
Query: 1268 AIFHHSRTVRLPDNVYGLLSKVREAKRQCVKEGLHQPTKEQVASCAGLSVDKLNKLLYST 1447
AIF HSRT+RLP+N+Y LL KV+EAKR ++EG H PTKE++A G++++KL +LL T
Sbjct: 394 AIFQHSRTIRLPENMYSLLGKVKEAKRLFIQEGHHDPTKEEIAERVGITIEKLQRLLLHT 453
Query: 1448 RMPLSMQQPVWSDQDTTYQEVTSDNSIEVPDISLSKKLMRQHVRSLLNVLSPKERKIIQL 1627
RMPLSMQQPVW+DQDTT+QEVT+D IE+PD+S++K+LMRQHVR+LL+VL+PKER+II+L
Sbjct: 454 RMPLSMQQPVWADQDTTFQEVTADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRL 513
Query: 1628 RFGIKDGSQKSLSEIGNVFGLSKERVRQLESRGLYKLKQHLSSHGLGAYAELL 1786
RFGI DG ++LSEIG VFG SKERVRQLE R L+KLKQ LSSHGL +Y +LL
Sbjct: 514 RFGIGDGIPRTLSEIGLVFGFSKERVRQLEQRALHKLKQCLSSHGLESYTDLL 566
>XP_015088005.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2
[Solanum pennellii]
Length = 534
Score = 498 bits (1282), Expect = e-166
Identities = 274/536 (51%), Positives = 358/536 (66%), Gaps = 16/536 (2%)
Frame = +2
Query: 230 VLHEQVNSSFAAMPTASSTRYFPASVLIQEQREECKPLFHSVKEDK-----LFQGLVGTT 394
+LHE +++P RY PAS + EQ+ E + H VKE+K + + LV
Sbjct: 1 MLHEHAAPVLSSVPHTYLGRYVPASAIGPEQQFENRLQLHLVKEEKTSLATIDRRLVEAA 60
Query: 395 SSSYK--DRLHSNQDMNDFQMQMLQWPASWYLLPSFETKKKLSQSLILPSDPRESTGQ-- 562
SS + D + S Q++N Q+Q+L WP Y P + K K L +P S G
Sbjct: 61 SSELEENDAVDSEQNINALQVQLLHWPGPSYSFPPYYLKGK--GPLSPNKEPLHSKGDKL 118
Query: 563 --VELESVVQXXXXXXXXXXXXXXXVSDCKLIEADLKESLYPSILVSLSVEKEIMVRSTR 736
E SVV D KL++ + + LV ++++ VRSTR
Sbjct: 119 MNFEPHSVVALARKALLASKEAALLAEDSKLLDDSHFPNFLSTNLVDDKLKEQRTVRSTR 178
Query: 737 LHQRRSKNRRVPIAVDETRLLEKQNPQ----RKKSEMVDQSDPLRLFL-SCGXXXXXXXX 901
+R+S+ R P + E + ++ + RK +E +D +DPLR+FL
Sbjct: 179 FIERQSRKRGAPKPIQEVQETNNRSGRPDVRRKVNESIDLNDPLRMFLWGPETKQLLTAK 238
Query: 902 XXXXXXXQIQALLKLQELRSRLKDEFARDPTFAEWAAACGLDCRKLKSELFSGQSSREKL 1081
+IQ +KLQE++ +L+ +FAR+PT EWA A G+ R+LKS+L SG+SSREKL
Sbjct: 239 EESELIVKIQISMKLQEVKHQLQIQFAREPTSLEWAEAAGITSRELKSQLLSGKSSREKL 298
Query: 1082 IYANFRMVVHVAKQYQGRGLSLEDLLQQGSMGLMKSVEKFKPQAGCRFATYAYWWIRQGI 1261
I AN RMVVH+AKQYQGRGL+L+DLLQ+GSMGLMKSVEKFKPQAGCRF TYAYWWIRQ +
Sbjct: 299 INANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMKSVEKFKPQAGCRFPTYAYWWIRQSV 358
Query: 1262 RKAIFHHSRTVRLPDNVYGLLSKVREAKRQCVKEGLHQPTKEQVASCAGLSVDKLNKLLY 1441
RKAIF HSRT+RLP+NVY LLSKV++AKR+C+++G PTKE +ASCAG+SV++L LL
Sbjct: 359 RKAIFQHSRTIRLPENVYALLSKVKDAKRECIQQGNRHPTKEDIASCAGMSVERLQNLLS 418
Query: 1442 STRMPLSMQQPVWSDQDTTYQEVTSDNSIEVPDISLSKKLMRQHVRSLLNVLSPKERKII 1621
+ R PLSMQQ VWSDQDTT+QE+T+DN+IE P++S+SK+LMR+H+R LLNVLSPKERKII
Sbjct: 419 NVRTPLSMQQSVWSDQDTTFQEITADNAIEAPELSVSKQLMRRHIRGLLNVLSPKERKII 478
Query: 1622 QLRFGIKDGSQKSLSEIGNVFGLSKERVRQLESRGLYKLKQHLSSHGLGAYAELLF 1789
+LRFGI DG KSLSEIG VFGLSKERVRQLE+R LYKLKQ+L+ HGL AY++LLF
Sbjct: 479 RLRFGIGDGKPKSLSEIGTVFGLSKERVRQLETRALYKLKQNLNKHGLDAYSDLLF 534
>XP_019077288.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2
[Vitis vinifera]
Length = 566
Score = 499 bits (1285), Expect = e-166
Identities = 276/534 (51%), Positives = 365/534 (68%), Gaps = 15/534 (2%)
Frame = +2
Query: 230 VLHEQVNSSFAAMPTASSTRYFPASVLIQEQREECKPLFHSVKEDKLFQGLVG------T 391
+LH+QV + A++PT + R FP SVL+QEQR+E +P ++K+++ FQ +
Sbjct: 35 MLHDQVAPAVASIPTTIA-RKFPTSVLLQEQRDEYRPFPQALKDERTFQATLEKRQMEIV 93
Query: 392 TSSSYKDRLHSNQDMNDFQMQMLQWPASWYLLPSFETKKKLS-QSLILPSDPRESTGQVE 568
S+ ++ NQ M +F+ Q+L P WY LPS +T +K S I+ S + ++
Sbjct: 94 VSADEENSDDHNQYMVNFERQLLLQPGLWYSLPSSQTGEKSPFSSSIMKSITTDIENSMD 153
Query: 569 LE--SVVQXXXXXXXXXXXXXXXVSDCKLIEADLKESLYPSILVSLSVE----KEIMVRS 730
++ V+ + KL+ ADL++S PS L ++S +E VRS
Sbjct: 154 VKPCDVLALAKKALSASKQAVSLYENAKLLGADLEDS--PSSLGAISSPNLPLEEKTVRS 211
Query: 731 TRLHQRRSKNRRVP-IAVDETRLLEKQNPQRKKSEMVDQSDPLRLFL-SCGXXXXXXXXX 904
TRL +RRSK RR P +AV E + QRK +E D DPLRLFL
Sbjct: 212 TRLLERRSKKRRNPKVAVHENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKE 271
Query: 905 XXXXXXQIQALLKLQELRSRLKDEFARDPTFAEWAAACGLDCRKLKSELFSGQSSREKLI 1084
QIQ L++L+E++ RL+ R+PT EWA A GL C+ L+S+L SG SR+KLI
Sbjct: 272 ESELIVQIQELMRLEEVKKRLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLI 331
Query: 1085 YANFRMVVHVAKQYQGRGLSLEDLLQQGSMGLMKSVEKFKPQAGCRFATYAYWWIRQGIR 1264
YAN RMVVH+AKQYQGRGL+L+DLLQ+GSMGLM SVEKFKP AGCRFA+YAYWWIRQ +R
Sbjct: 332 YANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVR 391
Query: 1265 KAIFHHSRTVRLPDNVYGLLSKVREAKRQCVKEGLHQPTKEQVASCAGLSVDKLNKLLYS 1444
KAIF HSRT+RLP+N+Y LL KV+EAKR ++EG H PTKE++A G++++KL +LL
Sbjct: 392 KAIFQHSRTIRLPENMYSLLGKVKEAKRLFIQEGHHDPTKEEIAERVGITIEKLQRLLLH 451
Query: 1445 TRMPLSMQQPVWSDQDTTYQEVTSDNSIEVPDISLSKKLMRQHVRSLLNVLSPKERKIIQ 1624
TRMPLSMQQPVW+DQDTT+QEVT+D IE+PD+S++K+LMRQHVR+LL+VL+PKER+II+
Sbjct: 452 TRMPLSMQQPVWADQDTTFQEVTADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIR 511
Query: 1625 LRFGIKDGSQKSLSEIGNVFGLSKERVRQLESRGLYKLKQHLSSHGLGAYAELL 1786
LRFGI DG ++LSEIG VFG SKERVRQLE R L+KLKQ LSSHGL +Y +LL
Sbjct: 512 LRFGIGDGIPRTLSEIGLVFGFSKERVRQLEQRALHKLKQCLSSHGLESYTDLL 565
>XP_010241845.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X3
[Nelumbo nucifera]
Length = 540
Score = 498 bits (1282), Expect = e-166
Identities = 262/537 (48%), Positives = 358/537 (66%), Gaps = 18/537 (3%)
Frame = +2
Query: 230 VLHEQVNSSFAAMPTASSTRYFPASVLIQEQREECKPLFHSVKEDKLFQGLVGTTSSSYK 409
+LHEQ N +MPT S TR+FPASVL+QEQR++ +P ++EDK Q ++ K
Sbjct: 4 LLHEQANPIVVSMPTTSITRHFPASVLLQEQRDDIRPFLQIIREDKTSQAMLDRRKLEDK 63
Query: 410 DRLHSNQDM-------NDFQMQMLQWPASWYLLPSFETKKKLSQSLILPSDPRESTGQVE 568
L+ + F+ Q+L WP WYLLPS +K S++ S + V+
Sbjct: 64 VHLYEEKKSCQPDRYWEGFERQLLYWPGLWYLLPSLYKGEKPLLSMVTQSTAAGTVKNVD 123
Query: 569 LE--SVVQXXXXXXXXXXXXXXXVSDCKLIEADLKESLYP-----SILVSLSVEKEIMVR 727
+ ++ D +L AD ES P ++ + + +E+ VR
Sbjct: 124 VRPCDALELAKKAVLASKQAASLAKDYELFGADSHESFLPDLEPRNLANKIPLREEVAVR 183
Query: 728 STRLHQRRSKNRRVP---IAVDETRLLEKQNPQRKKSEMVDQSDPLRLFL-SCGXXXXXX 895
S RL +R+SK R +P + V E K + +K E D +DPLRLFL
Sbjct: 184 SKRLLERQSKRRWIPRPKVVVSEASTSRKSDIHKKIHEGFDTNDPLRLFLWGPETKQLLT 243
Query: 896 XXXXXXXXXQIQALLKLQELRSRLKDEFARDPTFAEWAAACGLDCRKLKSELFSGQSSRE 1075
+Q L++L+E++ RL+ +F R+PT EWA A G+ C+ L+S L SG SSRE
Sbjct: 244 PKEESELFVHVQELIRLEEVKQRLQSQFDREPTLVEWAEAVGMTCQSLQSILHSGNSSRE 303
Query: 1076 KLIYANFRMVVHVAKQYQGRGLSLEDLLQQGSMGLMKSVEKFKPQAGCRFATYAYWWIRQ 1255
K+IYANFR+VVHVAK YQG+GL+L+DLLQ+GSMGLMKS+EKFKPQAGCRFATYAYWWIRQ
Sbjct: 304 KIIYANFRLVVHVAKHYQGQGLNLQDLLQEGSMGLMKSLEKFKPQAGCRFATYAYWWIRQ 363
Query: 1256 GIRKAIFHHSRTVRLPDNVYGLLSKVREAKRQCVKEGLHQPTKEQVASCAGLSVDKLNKL 1435
IRKAIF +SRT+RLP+NVY LLS+V++AK+ ++EG H PT E++A G++V+KL +L
Sbjct: 364 AIRKAIFQNSRTIRLPENVYSLLSQVKKAKKLFIQEG-HHPTNEELAKRVGITVEKLERL 422
Query: 1436 LYSTRMPLSMQQPVWSDQDTTYQEVTSDNSIEVPDISLSKKLMRQHVRSLLNVLSPKERK 1615
STRMPLS+QQPVW+DQDTT+QE+T+D +E PD+ ++K+LMR+HVR+L+++L PKER+
Sbjct: 423 FMSTRMPLSIQQPVWADQDTTFQEITADTEVEKPDLCVAKQLMRRHVRNLISILPPKERR 482
Query: 1616 IIQLRFGIKDGSQKSLSEIGNVFGLSKERVRQLESRGLYKLKQHLSSHGLGAYAELL 1786
II++R+GI++ KSL EIG++FGLSKERVRQLESR L+KLKQ LSS GLGAYA+LL
Sbjct: 483 IIRMRYGIENNEPKSLQEIGSIFGLSKERVRQLESRALHKLKQCLSSQGLGAYADLL 539
>XP_010325979.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2
[Solanum lycopersicum]
Length = 534
Score = 497 bits (1280), Expect = e-166
Identities = 274/536 (51%), Positives = 357/536 (66%), Gaps = 16/536 (2%)
Frame = +2
Query: 230 VLHEQVNSSFAAMPTASSTRYFPASVLIQEQREECKPLFHSVKEDK-----LFQGLVGTT 394
+LHE +++P RY PAS + EQ E + H VKE+K + + LV
Sbjct: 1 MLHEHAAPVLSSVPHTYLGRYVPASAIGPEQHFENRLQLHLVKEEKTSLATIDRRLVEAA 60
Query: 395 SSSYK--DRLHSNQDMNDFQMQMLQWPASWYLLPSFETKKKLSQSLILPSDPRESTGQ-- 562
SS + D + S Q++N Q+Q+L WP Y P + K K L +P S G
Sbjct: 61 SSELEENDAVDSEQNINALQVQLLHWPGPSYSFPPYYLKGK--GPLSPNKEPLHSKGDKL 118
Query: 563 --VELESVVQXXXXXXXXXXXXXXXVSDCKLIEADLKESLYPSILVSLSVEKEIMVRSTR 736
E SVV D KL++ + + LV ++++ VRSTR
Sbjct: 119 MNFEPHSVVALARKALLASKEAALLAEDSKLLDDSHFPNFLSTHLVDDKLKEQRTVRSTR 178
Query: 737 LHQRRSKNRRVPIAVDETRLLEKQNPQ----RKKSEMVDQSDPLRLFL-SCGXXXXXXXX 901
+R+S+ R P + E + ++ + RK +E +D +DPLR+FL
Sbjct: 179 FIERQSRKRGAPKPIQEVQETNNRSGRPDVRRKVNESIDLNDPLRMFLWGPETKQLLTAK 238
Query: 902 XXXXXXXQIQALLKLQELRSRLKDEFARDPTFAEWAAACGLDCRKLKSELFSGQSSREKL 1081
+IQ +KLQE++ +L+ +FAR+PT EWA A G+ R+LKS+L SG+SSREKL
Sbjct: 239 EESELIVKIQISMKLQEVKHQLQIQFAREPTSLEWAEAAGITSRELKSQLLSGKSSREKL 298
Query: 1082 IYANFRMVVHVAKQYQGRGLSLEDLLQQGSMGLMKSVEKFKPQAGCRFATYAYWWIRQGI 1261
I AN RMVVH+AKQYQGRGL+L+DLLQ+GSMGLMKSVEKFKPQAGCRF TYAYWWIRQ +
Sbjct: 299 INANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMKSVEKFKPQAGCRFPTYAYWWIRQSV 358
Query: 1262 RKAIFHHSRTVRLPDNVYGLLSKVREAKRQCVKEGLHQPTKEQVASCAGLSVDKLNKLLY 1441
RKAIF HSRT+RLP+NVY LLSKV++AKR+C+++G PTKE +ASCAG+SV++L LL
Sbjct: 359 RKAIFQHSRTIRLPENVYALLSKVKDAKRECIRQGNRHPTKEDIASCAGMSVERLQNLLS 418
Query: 1442 STRMPLSMQQPVWSDQDTTYQEVTSDNSIEVPDISLSKKLMRQHVRSLLNVLSPKERKII 1621
+ R PLSMQQ VWSDQDTT+QE+T+DN+IE P++S+SK+LMR+H+R LLNVLSPKERKII
Sbjct: 419 NVRTPLSMQQSVWSDQDTTFQEITADNAIEAPELSVSKQLMRRHIRGLLNVLSPKERKII 478
Query: 1622 QLRFGIKDGSQKSLSEIGNVFGLSKERVRQLESRGLYKLKQHLSSHGLGAYAELLF 1789
+LRFGI DG KSLSEIG VFGLSKERVRQLE+R LYKLKQ+L+ HGL AY++LLF
Sbjct: 479 RLRFGIGDGKPKSLSEIGAVFGLSKERVRQLETRALYKLKQNLNKHGLDAYSDLLF 534
>XP_015088004.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1
[Solanum pennellii]
Length = 563
Score = 498 bits (1282), Expect = e-165
Identities = 274/536 (51%), Positives = 358/536 (66%), Gaps = 16/536 (2%)
Frame = +2
Query: 230 VLHEQVNSSFAAMPTASSTRYFPASVLIQEQREECKPLFHSVKEDK-----LFQGLVGTT 394
+LHE +++P RY PAS + EQ+ E + H VKE+K + + LV
Sbjct: 30 MLHEHAAPVLSSVPHTYLGRYVPASAIGPEQQFENRLQLHLVKEEKTSLATIDRRLVEAA 89
Query: 395 SSSYK--DRLHSNQDMNDFQMQMLQWPASWYLLPSFETKKKLSQSLILPSDPRESTGQ-- 562
SS + D + S Q++N Q+Q+L WP Y P + K K L +P S G
Sbjct: 90 SSELEENDAVDSEQNINALQVQLLHWPGPSYSFPPYYLKGK--GPLSPNKEPLHSKGDKL 147
Query: 563 --VELESVVQXXXXXXXXXXXXXXXVSDCKLIEADLKESLYPSILVSLSVEKEIMVRSTR 736
E SVV D KL++ + + LV ++++ VRSTR
Sbjct: 148 MNFEPHSVVALARKALLASKEAALLAEDSKLLDDSHFPNFLSTNLVDDKLKEQRTVRSTR 207
Query: 737 LHQRRSKNRRVPIAVDETRLLEKQNPQ----RKKSEMVDQSDPLRLFL-SCGXXXXXXXX 901
+R+S+ R P + E + ++ + RK +E +D +DPLR+FL
Sbjct: 208 FIERQSRKRGAPKPIQEVQETNNRSGRPDVRRKVNESIDLNDPLRMFLWGPETKQLLTAK 267
Query: 902 XXXXXXXQIQALLKLQELRSRLKDEFARDPTFAEWAAACGLDCRKLKSELFSGQSSREKL 1081
+IQ +KLQE++ +L+ +FAR+PT EWA A G+ R+LKS+L SG+SSREKL
Sbjct: 268 EESELIVKIQISMKLQEVKHQLQIQFAREPTSLEWAEAAGITSRELKSQLLSGKSSREKL 327
Query: 1082 IYANFRMVVHVAKQYQGRGLSLEDLLQQGSMGLMKSVEKFKPQAGCRFATYAYWWIRQGI 1261
I AN RMVVH+AKQYQGRGL+L+DLLQ+GSMGLMKSVEKFKPQAGCRF TYAYWWIRQ +
Sbjct: 328 INANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMKSVEKFKPQAGCRFPTYAYWWIRQSV 387
Query: 1262 RKAIFHHSRTVRLPDNVYGLLSKVREAKRQCVKEGLHQPTKEQVASCAGLSVDKLNKLLY 1441
RKAIF HSRT+RLP+NVY LLSKV++AKR+C+++G PTKE +ASCAG+SV++L LL
Sbjct: 388 RKAIFQHSRTIRLPENVYALLSKVKDAKRECIQQGNRHPTKEDIASCAGMSVERLQNLLS 447
Query: 1442 STRMPLSMQQPVWSDQDTTYQEVTSDNSIEVPDISLSKKLMRQHVRSLLNVLSPKERKII 1621
+ R PLSMQQ VWSDQDTT+QE+T+DN+IE P++S+SK+LMR+H+R LLNVLSPKERKII
Sbjct: 448 NVRTPLSMQQSVWSDQDTTFQEITADNAIEAPELSVSKQLMRRHIRGLLNVLSPKERKII 507
Query: 1622 QLRFGIKDGSQKSLSEIGNVFGLSKERVRQLESRGLYKLKQHLSSHGLGAYAELLF 1789
+LRFGI DG KSLSEIG VFGLSKERVRQLE+R LYKLKQ+L+ HGL AY++LLF
Sbjct: 508 RLRFGIGDGKPKSLSEIGTVFGLSKERVRQLETRALYKLKQNLNKHGLDAYSDLLF 563
>XP_010241844.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2
[Nelumbo nucifera]
Length = 565
Score = 498 bits (1282), Expect = e-165
Identities = 262/537 (48%), Positives = 358/537 (66%), Gaps = 18/537 (3%)
Frame = +2
Query: 230 VLHEQVNSSFAAMPTASSTRYFPASVLIQEQREECKPLFHSVKEDKLFQGLVGTTSSSYK 409
+LHEQ N +MPT S TR+FPASVL+QEQR++ +P ++EDK Q ++ K
Sbjct: 29 LLHEQANPIVVSMPTTSITRHFPASVLLQEQRDDIRPFLQIIREDKTSQAMLDRRKLEDK 88
Query: 410 DRLHSNQDM-------NDFQMQMLQWPASWYLLPSFETKKKLSQSLILPSDPRESTGQVE 568
L+ + F+ Q+L WP WYLLPS +K S++ S + V+
Sbjct: 89 VHLYEEKKSCQPDRYWEGFERQLLYWPGLWYLLPSLYKGEKPLLSMVTQSTAAGTVKNVD 148
Query: 569 LE--SVVQXXXXXXXXXXXXXXXVSDCKLIEADLKESLYP-----SILVSLSVEKEIMVR 727
+ ++ D +L AD ES P ++ + + +E+ VR
Sbjct: 149 VRPCDALELAKKAVLASKQAASLAKDYELFGADSHESFLPDLEPRNLANKIPLREEVAVR 208
Query: 728 STRLHQRRSKNRRVP---IAVDETRLLEKQNPQRKKSEMVDQSDPLRLFL-SCGXXXXXX 895
S RL +R+SK R +P + V E K + +K E D +DPLRLFL
Sbjct: 209 SKRLLERQSKRRWIPRPKVVVSEASTSRKSDIHKKIHEGFDTNDPLRLFLWGPETKQLLT 268
Query: 896 XXXXXXXXXQIQALLKLQELRSRLKDEFARDPTFAEWAAACGLDCRKLKSELFSGQSSRE 1075
+Q L++L+E++ RL+ +F R+PT EWA A G+ C+ L+S L SG SSRE
Sbjct: 269 PKEESELFVHVQELIRLEEVKQRLQSQFDREPTLVEWAEAVGMTCQSLQSILHSGNSSRE 328
Query: 1076 KLIYANFRMVVHVAKQYQGRGLSLEDLLQQGSMGLMKSVEKFKPQAGCRFATYAYWWIRQ 1255
K+IYANFR+VVHVAK YQG+GL+L+DLLQ+GSMGLMKS+EKFKPQAGCRFATYAYWWIRQ
Sbjct: 329 KIIYANFRLVVHVAKHYQGQGLNLQDLLQEGSMGLMKSLEKFKPQAGCRFATYAYWWIRQ 388
Query: 1256 GIRKAIFHHSRTVRLPDNVYGLLSKVREAKRQCVKEGLHQPTKEQVASCAGLSVDKLNKL 1435
IRKAIF +SRT+RLP+NVY LLS+V++AK+ ++EG H PT E++A G++V+KL +L
Sbjct: 389 AIRKAIFQNSRTIRLPENVYSLLSQVKKAKKLFIQEG-HHPTNEELAKRVGITVEKLERL 447
Query: 1436 LYSTRMPLSMQQPVWSDQDTTYQEVTSDNSIEVPDISLSKKLMRQHVRSLLNVLSPKERK 1615
STRMPLS+QQPVW+DQDTT+QE+T+D +E PD+ ++K+LMR+HVR+L+++L PKER+
Sbjct: 448 FMSTRMPLSIQQPVWADQDTTFQEITADTEVEKPDLCVAKQLMRRHVRNLISILPPKERR 507
Query: 1616 IIQLRFGIKDGSQKSLSEIGNVFGLSKERVRQLESRGLYKLKQHLSSHGLGAYAELL 1786
II++R+GI++ KSL EIG++FGLSKERVRQLESR L+KLKQ LSS GLGAYA+LL
Sbjct: 508 IIRMRYGIENNEPKSLQEIGSIFGLSKERVRQLESRALHKLKQCLSSQGLGAYADLL 564