BLASTX nr result

ID: Lithospermum23_contig00022829 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00022829
         (245 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EMC82415.1 Putative protein C1orf170 like protein, partial [Colu...    51   6e-06
XP_013089811.1 PREDICTED: uncharacterized protein LOC106073724, ...    52   9e-06

>EMC82415.1 Putative protein C1orf170 like protein, partial [Columba livia]
          Length = 182

 Score = 51.2 bits (121), Expect = 6e-06
 Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   PCGKPGETKASRCGKPGSMVN-PYGKPGMTKSSPCGKPEATKISPCRKPRESIASPCGKP 177
           P G PG+T  +  G PG  +  P+G PG T  +P G P  T  +P   P +++ +P G P
Sbjct: 90  PWGHPGDTLGTPWGHPGDTLGTPWGHPGDTLGTPWGHPGDTLGTPWGHPGDTLGTPWGHP 149

Query: 178 GDNMISHCEKSGALMASLYGNL 243
           GD + +     G  + + +G+L
Sbjct: 150 GDTLGTPWGHPGDTLGAPWGHL 171


>XP_013089811.1 PREDICTED: uncharacterized protein LOC106073724, partial
           [Biomphalaria glabrata]
          Length = 442

 Score = 51.6 bits (122), Expect = 9e-06
 Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
 Frame = -3

Query: 234 IKASHKCS*FFTMTNHIVPWFTTRTSNALSWFATRTYFSRLWLPTRTGLSHPWFAIRINH 55
           +  ++  S F  +T + + WF+  T+N+LSWF+  T     WL      S  WF++   +
Sbjct: 12  VVTTNSLSWFSVVTTNPLSWFSVATTNSLSWFSVVTTNPLSWLSVAATNSLSWFSVVTTN 71

Query: 54  T-SWLPTTTCLSLSWFA 7
           T SW    T  SLSWF+
Sbjct: 72  TLSWFSVATTNSLSWFS 88



 Score = 51.6 bits (122), Expect = 9e-06
 Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
 Frame = -3

Query: 234 IKASHKCS*FFTMTNHIVPWFTTRTSNALSWFATRTYFSRLWLPTRTGLSHPWFAIRINH 55
           +  ++  S F  +T + + WF+  T+N+LSWF+  T     WL      S  WF++   +
Sbjct: 98  VVTTNSLSWFSVVTTNPLSWFSVATTNSLSWFSVVTTNPLSWLSVAATNSLSWFSVVTTN 157

Query: 54  T-SWLPTTTCLSLSWFA 7
           T SW    T  SLSWF+
Sbjct: 158 TLSWFSVATTNSLSWFS 174


Top