BLASTX nr result
ID: Lithospermum23_contig00022210
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00022210
(647 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
OMO73216.1 reverse transcriptase [Corchorus capsularis] 44 3e-09
XP_008346272.1 PREDICTED: uncharacterized protein LOC103409236 [... 54 5e-09
OMO96147.1 reverse transcriptase [Corchorus capsularis] 52 4e-07
EOY00433.1 Uncharacterized protein TCM_010295 [Theobroma cacao] 46 1e-06
OMO57964.1 reverse transcriptase [Corchorus capsularis] 41 2e-06
>OMO73216.1 reverse transcriptase [Corchorus capsularis]
Length = 1349
Score = 43.5 bits (101), Expect(3) = 3e-09
Identities = 27/109 (24%), Positives = 48/109 (44%)
Frame = +1
Query: 1 AVARVLGEDDMHKVMAIPLNGHHIRDRVIWNHTRSGNYLTCSGYITARTMRKNCELRXXX 180
++A + E++ ++ +P+N D +IW H ++G + S Y M K E R
Sbjct: 952 SIAHRISEEEAEAILEVPINDTGGDDEMIWRHEKNGKFTVRSAY----HMYKETEDRRLI 1007
Query: 181 XXXXXXXXXXIFLWKDLWGVAYTSESRLFYLEVFA**LPTRDNLGKMGV 327
WK +W + ++ + F +V A +PT +NL K V
Sbjct: 1008 QMPSSSHTIPEKFWKFIWSIFCPNKIKNFLWKVGANIVPTMENLFKKKV 1056
Score = 35.4 bits (80), Expect(3) = 3e-09
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 321 GR*FCVLCNNYPKSILHILLTCPFTRRFW 407
G C +CN K++ H+LL CP+T W
Sbjct: 1058 GNPLCTICNEKAKTVEHLLLLCPWTEHVW 1086
Score = 29.3 bits (64), Expect(3) = 3e-09
Identities = 11/54 (20%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 455 FKDWWFQL--SEQLEQRDKVEVLEQISGVLWQLWKFRNNIIFGEPHKTREHCIK 610
F WW S+ +++ + + ++ + + ++W +WK RN + F E ++
Sbjct: 1103 FSSWWLDSFDSKGIQKNEVMRLVARAAFLIWYIWKGRNVVQFNGKKPNAEGSVR 1156
>XP_008346272.1 PREDICTED: uncharacterized protein LOC103409236 [Malus domestica]
Length = 356
Score = 53.5 bits (127), Expect(3) = 5e-09
Identities = 30/105 (28%), Positives = 47/105 (44%)
Frame = +1
Query: 22 EDDMHKVMAIPLNGHHIRDRVIWNHTRSGNYLTCSGYITARTMRKNCELRXXXXXXXXXX 201
+DD+ + IP++ RD+ IW++T++G Y SGY A M KN E
Sbjct: 32 QDDLELIQTIPISRRGCRDKQIWHYTKNGIYSVHSGYYVAMEMMKNGEFGHKGGGMPSSA 91
Query: 202 XXXIFLWKDLWGVAYTSESRLFYLEVFA**LPTRDNLGKMGVNSV 336
+WK +W + ++ RLF L R NL + + V
Sbjct: 92 RVGGGVWKTIWPLLVPNKIRLFVWRACRKALAVRHNLERQRIRVV 136
Score = 32.0 bits (71), Expect(3) = 5e-09
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = +2
Query: 455 FKDWWFQLSEQLEQRDKVEVL-EQISGVLWQLWKFRNNIIFG----EPH 586
F + W ++ +L Q ++ E+L +Q+ W++WK RN +F +PH
Sbjct: 180 FLEGWERVVTRLGQEEEAELLLQQVVFGFWRIWKCRNEAVFNGSSIQPH 228
Score = 22.3 bits (46), Expect(3) = 5e-09
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = +3
Query: 333 CVLCNNYPKSILHILLTCPFTRRFW 407
C LC ++ H+ C F+ FW
Sbjct: 139 CELCGLLDETEGHLFFGCEFSCAFW 163
>OMO96147.1 reverse transcriptase [Corchorus capsularis]
Length = 1035
Score = 52.4 bits (124), Expect(2) = 4e-07
Identities = 31/101 (30%), Positives = 47/101 (46%)
Frame = +1
Query: 25 DDMHKVMAIPLNGHHIRDRVIWNHTRSGNYLTCSGYITARTMRKNCELRXXXXXXXXXXX 204
DD+H ++ IPL ++D +IWNHT +G+Y SGY AR + EL
Sbjct: 203 DDVHCILCIPLTSLMVKDALIWNHTGNGHYTVRSGYCVARRLLGK-ELNQVEERKE---- 257
Query: 205 XXIFLWKDLWGVAYTSESRLFYLEVFA**LPTRDNLGKMGV 327
+W+ +W + + F + LPT+ NL GV
Sbjct: 258 ----IWRIIWRAFLLPKVKYFLWRLIYNILPTKINLQNRGV 294
Score = 29.6 bits (65), Expect(2) = 4e-07
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 333 CVLCNNYPKSILHILLTCPFTRRFW 407
C +C+ S+ H+ C F+RR W
Sbjct: 300 CAVCSEAESSLFHVFFGCYFSRRVW 324
>EOY00433.1 Uncharacterized protein TCM_010295 [Theobroma cacao]
Length = 290
Score = 46.2 bits (108), Expect(3) = 1e-06
Identities = 31/98 (31%), Positives = 45/98 (45%)
Frame = +1
Query: 37 KVMAIPLNGHHIRDRVIWNHTRSGNYLTCSGYITARTMRKNCELRXXXXXXXXXXXXXIF 216
++++IPL+ I D +W T++G+Y SGY + N +
Sbjct: 8 QILSIPLSIRQIPDCQVWFDTKNGSYTVKSGYKFLGSTLDNVTNTSSSVQGN-------W 60
Query: 217 LWKDLWGVAYTSESRLFYLEVFA**LPTRDNLGKMGVN 330
LWK LW A ++ LF +V LPTR L K GVN
Sbjct: 61 LWKKLWHCAVPRKTMLFMWKVIHDILPTRSELIKRGVN 98
Score = 28.5 bits (62), Expect(3) = 1e-06
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +2
Query: 449 NSFKDWWFQLSEQLEQRDKVEVLEQISGVLWQLWKFRNNIIFGEPHKT 592
+S DW + E L + + E+ +LW +WK RN ++F + T
Sbjct: 142 DSIIDWLQGVFEVLNKDET----EEFICLLWAIWKTRNVVVFNQSRST 185
Score = 25.0 bits (53), Expect(3) = 1e-06
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +3
Query: 333 CVLCNNYPKSILHILLTCPFTRRFWV 410
C LC ++ H L C F+R W+
Sbjct: 103 CPLCEIEVETAFHCLCNCQFSRLVWL 128
>OMO57964.1 reverse transcriptase [Corchorus capsularis]
Length = 1620
Score = 40.8 bits (94), Expect(2) = 2e-06
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +1
Query: 22 EDDMHKVMAIPLNGHHIRDRVIWNHTRSGNYLTCSGYITAR 144
++D+ ++++IPL +RD +IWN+ +G Y SGY AR
Sbjct: 1251 QEDVDRILSIPLYQRPLRDTLIWNNAYNGQYSVRSGYFIAR 1291
Score = 38.9 bits (89), Expect(2) = 2e-06
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 9/127 (7%)
Frame = +2
Query: 221 GRTYGGLHIPPRVDFFIWKCLHN------DYQLEIILEKWALILCFMQ*LS*EHPTYFAY 382
G ++ G + P+V FF+W+ + N Q+ + +C S H F
Sbjct: 1308 GVSFWGALVLPKVKFFLWRLVSNILPSKSQLQVRGVQIDSVCDVCGNDESSVYH--IFFD 1365
Query: 383 LPLYSEILGSS-PW--QFLTGA*TWNSFKDWWFQLSEQLEQRDKVEVLEQISGVLWQLWK 553
P + G S PW +L+ W+S D+W L LE+ ++ LE ++ +LW +W
Sbjct: 1366 CPFSYRVWGQSCPWIQGYLS---EWSSRDDFWLLL---LEKASQLGSLELVASLLWLIWN 1419
Query: 554 FRNNIIF 574
RN ++
Sbjct: 1420 NRNKALY 1426