BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00022012
         (1156 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZV33986.1 DNA-directed RNA polymerase 3, chloroplastic-like [Do...   206   8e-56
XP_012837864.1 PREDICTED: DNA-directed RNA polymerase 3B, chloro...   204   9e-55
XP_004242994.1 PREDICTED: DNA-directed RNA polymerase 3, chlorop...   202   3e-54
XP_009608694.1 PREDICTED: DNA-directed RNA polymerase 3B, chloro...   201   9e-54
NP_001312292.1 DNA-directed RNA polymerase 3B, chloroplastic [Ni...   201   1e-53
XP_016459970.1 PREDICTED: DNA-directed RNA polymerase 3B, chloro...   201   1e-53
XP_015081184.1 PREDICTED: DNA-directed RNA polymerase 3, chlorop...   201   1e-53
XP_006343727.1 PREDICTED: DNA-directed RNA polymerase 3, chlorop...   199   4e-53
XP_016461034.1 PREDICTED: DNA-directed RNA polymerase 3, chlorop...   198   6e-53
NP_001289533.1 DNA-directed RNA polymerase 3, chloroplastic [Nic...   198   8e-53
XP_011069585.1 PREDICTED: DNA-directed RNA polymerase 3B, chloro...   197   1e-52
XP_011069584.1 PREDICTED: DNA-directed RNA polymerase 3B, chloro...   197   2e-52
XP_011069583.1 PREDICTED: DNA-directed RNA polymerase 3, chlorop...   197   3e-52
EYU37150.1 hypothetical protein MIMGU_mgv1a000925mg [Erythranthe...   195   1e-51
XP_016579696.1 PREDICTED: DNA-directed RNA polymerase 3, chlorop...   179   3e-46
XP_016579695.1 PREDICTED: DNA-directed RNA polymerase 3, chlorop...   179   3e-46
XP_018818702.1 PREDICTED: DNA-directed RNA polymerase 3, chlorop...   174   2e-44
XP_018818701.1 PREDICTED: DNA-directed RNA polymerase 3, chlorop...   174   2e-44
XP_004144791.2 PREDICTED: DNA-directed RNA polymerase 3, chlorop...   173   4e-44
XP_017250907.1 PREDICTED: DNA-directed RNA polymerase 3, chlorop...   173   6e-44

>KZV33986.1 DNA-directed RNA polymerase 3, chloroplastic-like [Dorcoceras
           hygrometricum]
          Length = 871

 Score =  206 bits (524), Expect = 8e-56
 Identities = 108/181 (59%), Positives = 129/181 (71%), Gaps = 6/181 (3%)
 Frame = -1

Query: 526 NLQKIPNGVAQKVIENSSKRVFIQDPPWISSLFMKNLY------NGVKLEFREMERRKYN 365
           NLQ IP+G  + + E  +KR+FIQDPPWISS+FMKNL       +GVK+EF+EMERR+Y 
Sbjct: 6   NLQLIPDGFPRNLPEEEAKRIFIQDPPWISSIFMKNLIFRSKSRSGVKIEFQEMERRRYY 65

Query: 364 FLRKRQVKAETEAWXXXXXXXXXXXXXXXEKKLAPNLPCIKKMFLNWFEPLRVAIEREXX 185
            LRKRQ+KAETEAW               EKKLAPNLP +KK+ L WFEPLR AIERE  
Sbjct: 66  LLRKRQIKAETEAWENQVEEYRELEREMCEKKLAPNLPYVKKLILGWFEPLREAIEREQK 125

Query: 184 XXXXXXXXXXXAPNIDCLPADKMAVIVMHKLMALLMMGGKDERSVRVVEAAIQIGVSIEH 5
                      AP +D LPA+KMAVIVMHK+MAL+MMGGK++R VRVVEAA+QIGV+IE 
Sbjct: 126 SQRTKKNKAAFAPFVDALPAEKMAVIVMHKIMALMMMGGKEDRHVRVVEAAVQIGVAIEQ 185

Query: 4   E 2
           E
Sbjct: 186 E 186


>XP_012837864.1 PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic
           [Erythranthe guttata]
          Length = 953

 Score =  204 bits (518), Expect = 9e-55
 Identities = 110/180 (61%), Positives = 124/180 (68%), Gaps = 6/180 (3%)
 Frame = -1

Query: 523 LQKIPNGVAQKVIENSSKRVFIQDPPWISSLFMKNLY------NGVKLEFREMERRKYNF 362
           LQ IPNG      + S  RVFIQDPPWISSLFMKNL        GVK+EF+EMERRKY  
Sbjct: 58  LQVIPNGFPSNFTKESKDRVFIQDPPWISSLFMKNLLFRSRNRGGVKIEFQEMERRKYYL 117

Query: 361 LRKRQVKAETEAWXXXXXXXXXXXXXXXEKKLAPNLPCIKKMFLNWFEPLRVAIEREXXX 182
           LR+RQVKAETEAW               EKKLAPNLP +KK+ L WFEPLR AIE+E   
Sbjct: 118 LRRRQVKAETEAWENKVEEYRELEREMCEKKLAPNLPYVKKLILGWFEPLREAIEKEQNT 177

Query: 181 XXXXXXXXXXAPNIDCLPADKMAVIVMHKLMALLMMGGKDERSVRVVEAAIQIGVSIEHE 2
                     AP ID LPADKMAVIVMHK+M LLMMGGK++R VRVVEAA+QIGV++E+E
Sbjct: 178 QRSKKNKAAFAPFIDALPADKMAVIVMHKMMGLLMMGGKEDRCVRVVEAAVQIGVAVENE 237


>XP_004242994.1 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Solanum
           lycopersicum]
          Length = 1007

 Score =  202 bits (515), Expect = 3e-54
 Identities = 110/193 (56%), Positives = 134/193 (69%), Gaps = 7/193 (3%)
 Frame = -1

Query: 559 ESSEKYTQESCNLQKIPNGVAQKVIENSSKRVFIQDPPWISSLFMKNLY------NGVKL 398
           E+  +  +E  NLQKIPNG    + + S+KRVFIQDPPW+SSLFM NL+       GV+ 
Sbjct: 100 ENLTENLEELVNLQKIPNGYPLVLQKESNKRVFIQDPPWVSSLFMNNLFVRAKQVKGVRR 159

Query: 397 EFREMERRK-YNFLRKRQVKAETEAWXXXXXXXXXXXXXXXEKKLAPNLPCIKKMFLNWF 221
           EFRE+ERR+ Y  LR+RQ+KAETEAW               EKKLAPNLP +KK+ L WF
Sbjct: 160 EFREIERRRRYAMLRRRQIKAETEAWEQMVEEYRELEREMCEKKLAPNLPYVKKLMLGWF 219

Query: 220 EPLRVAIEREXXXXXXXXXXXXXAPNIDCLPADKMAVIVMHKLMALLMMGGKDERSVRVV 41
           EPLR AIERE             AP+ID LPADKMAVIVMHKLM LLMMGGK+ER V+VV
Sbjct: 220 EPLRQAIEREQNAEMTQKHRTAYAPHIDSLPADKMAVIVMHKLMGLLMMGGKEERCVQVV 279

Query: 40  EAAIQIGVSIEHE 2
           +AA+QIG+++E+E
Sbjct: 280 QAAVQIGMAVENE 292


>XP_009608694.1 PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic isoform X1
           [Nicotiana tomentosiformis]
          Length = 919

 Score =  201 bits (510), Expect = 9e-54
 Identities = 111/204 (54%), Positives = 138/204 (67%), Gaps = 7/204 (3%)
 Frame = -1

Query: 592 LENSSKRLFVQESSEKYTQESCNLQKIPNGVAQKVIENSSKRVFIQDPPWISSLFMKNLY 413
           + N   +  V  S+++  +E  NLQKIPNG   K    S+KRVFIQDPPW+SSLFM +L+
Sbjct: 3   INNIQSQTTVCVSTDENLEELVNLQKIPNGFLNK---ESNKRVFIQDPPWVSSLFMNSLF 59

Query: 412 ------NGVKLEFREMERRK-YNFLRKRQVKAETEAWXXXXXXXXXXXXXXXEKKLAPNL 254
                  GV+ EFRE+ERR+ Y  LR+RQ+KAETEAW               EKKLAPNL
Sbjct: 60  VRAKQVQGVRREFREIERRRRYAMLRRRQIKAETEAWEQMVEEYRELEREMCEKKLAPNL 119

Query: 253 PCIKKMFLNWFEPLRVAIEREXXXXXXXXXXXXXAPNIDCLPADKMAVIVMHKLMALLMM 74
           P +KK+ L WFEPLR AIE+E             AP+ID LPADKMAVIVMHKLM LLMM
Sbjct: 120 PYVKKLLLGWFEPLRQAIEKEQNAETTVKHRAAFAPHIDSLPADKMAVIVMHKLMGLLMM 179

Query: 73  GGKDERSVRVVEAAIQIGVSIEHE 2
           GGK+ER V+VV+AA+QIG+++E+E
Sbjct: 180 GGKEERCVQVVQAAVQIGMAVENE 203


>NP_001312292.1 DNA-directed RNA polymerase 3B, chloroplastic [Nicotiana tabacum]
           Q8L6J1.2 RecName: Full=DNA-directed RNA polymerase 3B,
           chloroplastic; AltName: Full=NictaRpoT3-tom; AltName:
           Full=T7 bacteriophage-type single subunit RNA polymerase
           3B; Flags: Precursor CAC95021.2 chloroplast RNA
           polymerase [Nicotiana tabacum]
          Length = 977

 Score =  201 bits (510), Expect = 1e-53
 Identities = 111/204 (54%), Positives = 138/204 (67%), Gaps = 7/204 (3%)
 Frame = -1

Query: 592 LENSSKRLFVQESSEKYTQESCNLQKIPNGVAQKVIENSSKRVFIQDPPWISSLFMKNLY 413
           + N   +  V  S+++  +E  NLQKIPNG   K    S+KRVFIQDPPW+SSLFM +L+
Sbjct: 61  INNIQSQTTVCVSTDENLEELVNLQKIPNGFLNK---ESNKRVFIQDPPWVSSLFMNSLF 117

Query: 412 ------NGVKLEFREMERRK-YNFLRKRQVKAETEAWXXXXXXXXXXXXXXXEKKLAPNL 254
                  GV+ EFRE+ERR+ Y  LR+RQ+KAETEAW               EKKLAPNL
Sbjct: 118 VRAKQVQGVRREFREIERRRRYAMLRRRQIKAETEAWEQMVEEYRELEREMCEKKLAPNL 177

Query: 253 PCIKKMFLNWFEPLRVAIEREXXXXXXXXXXXXXAPNIDCLPADKMAVIVMHKLMALLMM 74
           P +KK+ L WFEPLR AIE+E             AP+ID LPADKMAVIVMHKLM LLMM
Sbjct: 178 PYVKKLLLGWFEPLRQAIEKEQNAETTVKHRAAFAPHIDSLPADKMAVIVMHKLMGLLMM 237

Query: 73  GGKDERSVRVVEAAIQIGVSIEHE 2
           GGK+ER V+VV+AA+QIG+++E+E
Sbjct: 238 GGKEERCVQVVQAAVQIGMAVENE 261


>XP_016459970.1 PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic, partial
           [Nicotiana tabacum]
          Length = 988

 Score =  201 bits (510), Expect = 1e-53
 Identities = 111/204 (54%), Positives = 138/204 (67%), Gaps = 7/204 (3%)
 Frame = -1

Query: 592 LENSSKRLFVQESSEKYTQESCNLQKIPNGVAQKVIENSSKRVFIQDPPWISSLFMKNLY 413
           + N   +  V  S+++  +E  NLQKIPNG   K    S+KRVFIQDPPW+SSLFM +L+
Sbjct: 72  INNIQSQTTVCVSTDENLEELVNLQKIPNGFLNK---ESNKRVFIQDPPWVSSLFMNSLF 128

Query: 412 ------NGVKLEFREMERRK-YNFLRKRQVKAETEAWXXXXXXXXXXXXXXXEKKLAPNL 254
                  GV+ EFRE+ERR+ Y  LR+RQ+KAETEAW               EKKLAPNL
Sbjct: 129 VRAKQVQGVRREFREIERRRRYAMLRRRQIKAETEAWEQMVEEYRELEREMCEKKLAPNL 188

Query: 253 PCIKKMFLNWFEPLRVAIEREXXXXXXXXXXXXXAPNIDCLPADKMAVIVMHKLMALLMM 74
           P +KK+ L WFEPLR AIE+E             AP+ID LPADKMAVIVMHKLM LLMM
Sbjct: 189 PYVKKLLLGWFEPLRQAIEKEQNAETTVKHRAAFAPHIDSLPADKMAVIVMHKLMGLLMM 248

Query: 73  GGKDERSVRVVEAAIQIGVSIEHE 2
           GGK+ER V+VV+AA+QIG+++E+E
Sbjct: 249 GGKEERCVQVVQAAVQIGMAVENE 272


>XP_015081184.1 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Solanum
           pennellii]
          Length = 1036

 Score =  201 bits (510), Expect = 1e-53
 Identities = 109/193 (56%), Positives = 133/193 (68%), Gaps = 7/193 (3%)
 Frame = -1

Query: 559 ESSEKYTQESCNLQKIPNGVAQKVIENSSKRVFIQDPPWISSLFMKNLY------NGVKL 398
           E+  +  +E  NLQKIPNG    + + S+KRVFIQDPPW+SSLFM NL+       GV+ 
Sbjct: 129 ENLTENLEELVNLQKIPNGYPLVLQKESNKRVFIQDPPWVSSLFMNNLFVRAKQVKGVRR 188

Query: 397 EFREM-ERRKYNFLRKRQVKAETEAWXXXXXXXXXXXXXXXEKKLAPNLPCIKKMFLNWF 221
           EFRE+  RR+Y  LR+RQ+KAETEAW               EKKLAPNLP +KK+ L WF
Sbjct: 189 EFREIARRRRYAMLRRRQIKAETEAWEQMVEEYRELEREMCEKKLAPNLPYVKKLMLGWF 248

Query: 220 EPLRVAIEREXXXXXXXXXXXXXAPNIDCLPADKMAVIVMHKLMALLMMGGKDERSVRVV 41
           EPLR AIERE             AP+ID LPADKMAVIVMHKLM LLMMGGK+ER V+VV
Sbjct: 249 EPLRQAIEREQNAEMTQKHRTAYAPHIDSLPADKMAVIVMHKLMGLLMMGGKEERCVQVV 308

Query: 40  EAAIQIGVSIEHE 2
           +AA+QIG+++E+E
Sbjct: 309 QAAVQIGMAVENE 321


>XP_006343727.1 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Solanum
           tuberosum]
          Length = 1015

 Score =  199 bits (507), Expect = 4e-53
 Identities = 108/193 (55%), Positives = 134/193 (69%), Gaps = 7/193 (3%)
 Frame = -1

Query: 559 ESSEKYTQESCNLQKIPNGVAQKVIENSSKRVFIQDPPWISSLFMKNLY------NGVKL 398
           E+  +  +E  NLQKIPNG    + + S+KRVFIQDPPW+SSLFM +L+       GV+ 
Sbjct: 108 ENLTENLEELVNLQKIPNGYPLVLQKESNKRVFIQDPPWVSSLFMNSLFVRAKQVKGVRR 167

Query: 397 EFREMERRK-YNFLRKRQVKAETEAWXXXXXXXXXXXXXXXEKKLAPNLPCIKKMFLNWF 221
           EFRE+ERR+ Y  LR+RQ+KAETEAW               EKKLAPNLP +KK+ L WF
Sbjct: 168 EFREIERRRRYAMLRRRQIKAETEAWEQMVEEYRELEREMCEKKLAPNLPYVKKLLLGWF 227

Query: 220 EPLRVAIEREXXXXXXXXXXXXXAPNIDCLPADKMAVIVMHKLMALLMMGGKDERSVRVV 41
           EPLR AIE+E             AP+ID LPADKMAVIVMHKLM LLMMGGK+ER V+VV
Sbjct: 228 EPLRQAIEKEQNAEMTQKHRTAYAPHIDSLPADKMAVIVMHKLMGLLMMGGKEERCVQVV 287

Query: 40  EAAIQIGVSIEHE 2
           +AA+QIG+++E+E
Sbjct: 288 QAAVQIGMAVENE 300


>XP_016461034.1 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic isoform X1
           [Nicotiana tabacum]
          Length = 919

 Score =  198 bits (504), Expect = 6e-53
 Identities = 111/202 (54%), Positives = 137/202 (67%), Gaps = 7/202 (3%)
 Frame = -1

Query: 586 NSSKRLFVQESSEKYTQESCNLQKIPNGVAQKVIENSSKRVFIQDPPWISSLFMKNLY-- 413
           N   +  V  S+++  +E  NLQKI NGV  K    S+KRVFIQDPPW+SSLFM +L+  
Sbjct: 6   NIQSQTTVCVSTDENLEELVNLQKIANGVLTK---ESNKRVFIQDPPWVSSLFMNSLFVR 62

Query: 412 ----NGVKLEFREMERRK-YNFLRKRQVKAETEAWXXXXXXXXXXXXXXXEKKLAPNLPC 248
                GV+ EFRE+ERR+ Y  LR+RQ+KAETEAW               EKKLAPNLP 
Sbjct: 63  AKQVQGVRREFREIERRRRYAMLRRRQIKAETEAWEQMVEEYRELEREMCEKKLAPNLPY 122

Query: 247 IKKMFLNWFEPLRVAIEREXXXXXXXXXXXXXAPNIDCLPADKMAVIVMHKLMALLMMGG 68
           +KK+ L WFEPLR AIE+E             AP+ID LPADKMAVIVMHKLM LLMMGG
Sbjct: 123 VKKLLLGWFEPLRQAIEKEQNAETTVKHRAAFAPHIDSLPADKMAVIVMHKLMGLLMMGG 182

Query: 67  KDERSVRVVEAAIQIGVSIEHE 2
           K+ER V+VV+AA+QIG+++E+E
Sbjct: 183 KEERCVQVVQAAVQIGMAVENE 204


>NP_001289533.1 DNA-directed RNA polymerase 3, chloroplastic [Nicotiana sylvestris]
           P69242.1 RecName: Full=DNA-directed RNA polymerase 3,
           chloroplastic; AltName: Full=NsRpoT-C; AltName: Full=T7
           bacteriophage-type single subunit RNA polymerase 3;
           Flags: Precursor P69243.1 RecName: Full=DNA-directed RNA
           polymerase 3A, chloroplastic; AltName:
           Full=NictaRpoT3-syl; AltName: Full=T7 bacteriophage-type
           single subunit RNA polymerase 3A; Flags: Precursor
           CAC82576.3 phage-type RNA polymerase [Nicotiana
           sylvestris] CAC95027.2 plastid RNA polymerase [Nicotiana
           tabacum] BAC22693.1 T7 bacteriophage-type single subunit
           RNA polymerase [Nicotiana sylvestris] BAC22694.1 T7
           bacteriophage-type single subunit RNA polymerase
           [Nicotiana sylvestris]
          Length = 977

 Score =  198 bits (504), Expect = 8e-53
 Identities = 111/202 (54%), Positives = 137/202 (67%), Gaps = 7/202 (3%)
 Frame = -1

Query: 586 NSSKRLFVQESSEKYTQESCNLQKIPNGVAQKVIENSSKRVFIQDPPWISSLFMKNLY-- 413
           N   +  V  S+++  +E  NLQKI NGV  K    S+KRVFIQDPPW+SSLFM +L+  
Sbjct: 64  NIQSQTTVCVSTDENLEELVNLQKIANGVLTK---ESNKRVFIQDPPWVSSLFMNSLFVR 120

Query: 412 ----NGVKLEFREMERRK-YNFLRKRQVKAETEAWXXXXXXXXXXXXXXXEKKLAPNLPC 248
                GV+ EFRE+ERR+ Y  LR+RQ+KAETEAW               EKKLAPNLP 
Sbjct: 121 AKQVQGVRREFREIERRRRYAMLRRRQIKAETEAWEQMVEEYRELEREMCEKKLAPNLPY 180

Query: 247 IKKMFLNWFEPLRVAIEREXXXXXXXXXXXXXAPNIDCLPADKMAVIVMHKLMALLMMGG 68
           +KK+ L WFEPLR AIE+E             AP+ID LPADKMAVIVMHKLM LLMMGG
Sbjct: 181 VKKLLLGWFEPLRQAIEKEQNAETTVKHRAAFAPHIDSLPADKMAVIVMHKLMGLLMMGG 240

Query: 67  KDERSVRVVEAAIQIGVSIEHE 2
           K+ER V+VV+AA+QIG+++E+E
Sbjct: 241 KEERCVQVVQAAVQIGMAVENE 262


>XP_011069585.1 PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic isoform X3
           [Sesamum indicum]
          Length = 816

 Score =  197 bits (500), Expect = 1e-52
 Identities = 106/180 (58%), Positives = 125/180 (69%), Gaps = 6/180 (3%)
 Frame = -1

Query: 523 LQKIPNGVAQKVIENSSKRVFIQDPPWISSLFMKNLY------NGVKLEFREMERRKYNF 362
           LQ +PNG    + + SS R FIQDPPWISSL+MK+L       + VK+EF+E ERRKY  
Sbjct: 58  LQVMPNGFQSNLTKESSGRGFIQDPPWISSLYMKSLLFRSKNRSEVKIEFQETERRKYYL 117

Query: 361 LRKRQVKAETEAWXXXXXXXXXXXXXXXEKKLAPNLPCIKKMFLNWFEPLRVAIEREXXX 182
           LR+RQ+KAETEAW               EKKLAPNLP +KK+ L WFEPLR AIE+E   
Sbjct: 118 LRRRQIKAETEAWENMVEEYRELEREMCEKKLAPNLPYVKKLILGWFEPLREAIEKEQNS 177

Query: 181 XXXXXXXXXXAPNIDCLPADKMAVIVMHKLMALLMMGGKDERSVRVVEAAIQIGVSIEHE 2
                     AP ID LPADKMAVIVMHK+M+LLMMGGK++R VRVVEAA+QIGV+IEHE
Sbjct: 178 QRSKKQKAAFAPFIDALPADKMAVIVMHKIMSLLMMGGKEDRCVRVVEAAVQIGVAIEHE 237


>XP_011069584.1 PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic isoform X2
           [Sesamum indicum]
          Length = 884

 Score =  197 bits (500), Expect = 2e-52
 Identities = 106/180 (58%), Positives = 125/180 (69%), Gaps = 6/180 (3%)
 Frame = -1

Query: 523 LQKIPNGVAQKVIENSSKRVFIQDPPWISSLFMKNLY------NGVKLEFREMERRKYNF 362
           LQ +PNG    + + SS R FIQDPPWISSL+MK+L       + VK+EF+E ERRKY  
Sbjct: 58  LQVMPNGFQSNLTKESSGRGFIQDPPWISSLYMKSLLFRSKNRSEVKIEFQETERRKYYL 117

Query: 361 LRKRQVKAETEAWXXXXXXXXXXXXXXXEKKLAPNLPCIKKMFLNWFEPLRVAIEREXXX 182
           LR+RQ+KAETEAW               EKKLAPNLP +KK+ L WFEPLR AIE+E   
Sbjct: 118 LRRRQIKAETEAWENMVEEYRELEREMCEKKLAPNLPYVKKLILGWFEPLREAIEKEQNS 177

Query: 181 XXXXXXXXXXAPNIDCLPADKMAVIVMHKLMALLMMGGKDERSVRVVEAAIQIGVSIEHE 2
                     AP ID LPADKMAVIVMHK+M+LLMMGGK++R VRVVEAA+QIGV+IEHE
Sbjct: 178 QRSKKQKAAFAPFIDALPADKMAVIVMHKIMSLLMMGGKEDRCVRVVEAAVQIGVAIEHE 237


>XP_011069583.1 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic isoform X1
           [Sesamum indicum]
          Length = 952

 Score =  197 bits (500), Expect = 3e-52
 Identities = 106/180 (58%), Positives = 125/180 (69%), Gaps = 6/180 (3%)
 Frame = -1

Query: 523 LQKIPNGVAQKVIENSSKRVFIQDPPWISSLFMKNLY------NGVKLEFREMERRKYNF 362
           LQ +PNG    + + SS R FIQDPPWISSL+MK+L       + VK+EF+E ERRKY  
Sbjct: 58  LQVMPNGFQSNLTKESSGRGFIQDPPWISSLYMKSLLFRSKNRSEVKIEFQETERRKYYL 117

Query: 361 LRKRQVKAETEAWXXXXXXXXXXXXXXXEKKLAPNLPCIKKMFLNWFEPLRVAIEREXXX 182
           LR+RQ+KAETEAW               EKKLAPNLP +KK+ L WFEPLR AIE+E   
Sbjct: 118 LRRRQIKAETEAWENMVEEYRELEREMCEKKLAPNLPYVKKLILGWFEPLREAIEKEQNS 177

Query: 181 XXXXXXXXXXAPNIDCLPADKMAVIVMHKLMALLMMGGKDERSVRVVEAAIQIGVSIEHE 2
                     AP ID LPADKMAVIVMHK+M+LLMMGGK++R VRVVEAA+QIGV+IEHE
Sbjct: 178 QRSKKQKAAFAPFIDALPADKMAVIVMHKIMSLLMMGGKEDRCVRVVEAAVQIGVAIEHE 237


>EYU37150.1 hypothetical protein MIMGU_mgv1a000925mg [Erythranthe guttata]
          Length = 941

 Score =  195 bits (495), Expect = 1e-51
 Identities = 104/168 (61%), Positives = 119/168 (70%), Gaps = 6/168 (3%)
 Frame = -1

Query: 487 IENSSKRVFIQDPPWISSLFMKNLY------NGVKLEFREMERRKYNFLRKRQVKAETEA 326
           ++ S  RVFIQDPPWISSLFMKNL        GVK+EF+EMERRKY  LR+RQVKAETEA
Sbjct: 58  LQESKDRVFIQDPPWISSLFMKNLLFRSRNRGGVKIEFQEMERRKYYLLRRRQVKAETEA 117

Query: 325 WXXXXXXXXXXXXXXXEKKLAPNLPCIKKMFLNWFEPLRVAIEREXXXXXXXXXXXXXAP 146
           W               EKKLAPNLP +KK+ L WFEPLR AIE+E             AP
Sbjct: 118 WENKVEEYRELEREMCEKKLAPNLPYVKKLILGWFEPLREAIEKEQNTQRSKKNKAAFAP 177

Query: 145 NIDCLPADKMAVIVMHKLMALLMMGGKDERSVRVVEAAIQIGVSIEHE 2
            ID LPADKMAVIVMHK+M LLMMGGK++R VRVVEAA+QIGV++E+E
Sbjct: 178 FIDALPADKMAVIVMHKMMGLLMMGGKEDRCVRVVEAAVQIGVAVENE 225


>XP_016579696.1 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic isoform X2
           [Capsicum annuum]
          Length = 971

 Score =  179 bits (455), Expect = 3e-46
 Identities = 112/253 (44%), Positives = 154/253 (60%), Gaps = 11/253 (4%)
 Frame = -1

Query: 727 TQELCNLQKIPQKMLENSSKRVFLQDSSENYTQELCNLQKNSQK---MLENSSKRLFVQE 557
           T+++   + IP K+ +  S    L +       + C+  KN +     L  S     V  
Sbjct: 13  TRDIYQSRTIP-KLQKGCSFNAILHNQELLRLSQNCSFPKNLKLPVVKLPVSVHSDVVCV 71

Query: 556 SSEKYTQESCNLQKIPNGVAQKVI-ENSSKRVFIQDPPWISSLFMKNLY------NGVKL 398
           S+++  +E  +L+KI +GV + +  E  S+RVFIQ+P W+SSLFM +L+       GV+ 
Sbjct: 72  STDENLEELVSLEKI-DGVPEFLRKEGVSRRVFIQEPSWVSSLFMSSLFVRSTKVGGVRR 130

Query: 397 EFREMERR-KYNFLRKRQVKAETEAWXXXXXXXXXXXXXXXEKKLAPNLPCIKKMFLNWF 221
           +FR++ERR KY  LR+RQ+KAETEAW               EKKLAPNLP +KK+ L WF
Sbjct: 131 DFRDIERRRKYGMLRRRQIKAETEAWEEMVEEYRELEREMCEKKLAPNLPYVKKLMLGWF 190

Query: 220 EPLRVAIEREXXXXXXXXXXXXXAPNIDCLPADKMAVIVMHKLMALLMMGGKDERSVRVV 41
           EPLR  IE+E             +P ID LPADKMAVIVMHKLM LLMMGGK+ER V+VV
Sbjct: 191 EPLRQGIEKEQKAEMTRKHRAAYSPYIDSLPADKMAVIVMHKLMGLLMMGGKEERCVQVV 250

Query: 40  EAAIQIGVSIEHE 2
           +AA+QIG+++E+E
Sbjct: 251 QAAVQIGMAVENE 263


>XP_016579695.1 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic isoform X1
           [Capsicum annuum]
          Length = 978

 Score =  179 bits (455), Expect = 3e-46
 Identities = 112/253 (44%), Positives = 154/253 (60%), Gaps = 11/253 (4%)
 Frame = -1

Query: 727 TQELCNLQKIPQKMLENSSKRVFLQDSSENYTQELCNLQKNSQK---MLENSSKRLFVQE 557
           T+++   + IP K+ +  S    L +       + C+  KN +     L  S     V  
Sbjct: 13  TRDIYQSRTIP-KLQKGCSFNAILHNQELLRLSQNCSFPKNLKLPVVKLPVSVHSDVVCV 71

Query: 556 SSEKYTQESCNLQKIPNGVAQKVI-ENSSKRVFIQDPPWISSLFMKNLY------NGVKL 398
           S+++  +E  +L+KI +GV + +  E  S+RVFIQ+P W+SSLFM +L+       GV+ 
Sbjct: 72  STDENLEELVSLEKI-DGVPEFLRKEGVSRRVFIQEPSWVSSLFMSSLFVRSTKVGGVRR 130

Query: 397 EFREMERR-KYNFLRKRQVKAETEAWXXXXXXXXXXXXXXXEKKLAPNLPCIKKMFLNWF 221
           +FR++ERR KY  LR+RQ+KAETEAW               EKKLAPNLP +KK+ L WF
Sbjct: 131 DFRDIERRRKYGMLRRRQIKAETEAWEEMVEEYRELEREMCEKKLAPNLPYVKKLMLGWF 190

Query: 220 EPLRVAIEREXXXXXXXXXXXXXAPNIDCLPADKMAVIVMHKLMALLMMGGKDERSVRVV 41
           EPLR  IE+E             +P ID LPADKMAVIVMHKLM LLMMGGK+ER V+VV
Sbjct: 191 EPLRQGIEKEQKAEMTRKHRAAYSPYIDSLPADKMAVIVMHKLMGLLMMGGKEERCVQVV 250

Query: 40  EAAIQIGVSIEHE 2
           +AA+QIG+++E+E
Sbjct: 251 QAAVQIGMAVENE 263


>XP_018818702.1 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic isoform X2
           [Juglans regia]
          Length = 883

 Score =  174 bits (441), Expect = 2e-44
 Identities = 128/325 (39%), Positives = 157/325 (48%), Gaps = 11/325 (3%)
 Frame = -1

Query: 943 FTPSPRAQ-----WSKSNPKKLQIK-HSNFIFASFSEQIIFSKTSSFSFPHTLKNLPNLH 782
           F PSPRAQ     W +  P K+  K H N  F   S    F K S    P  L    NL 
Sbjct: 7   FYPSPRAQIHPTTWRR--PPKINTKSHKNLYFLFSSNSNTFFKPSLSPTPFPL----NLK 60

Query: 781 SHIHHIKIQPLHDSTENYTQELCNLQKIPQKMLENSSKRVFLQDSSENYTQELCNLQKNS 602
           S  + I++ PL D                                         ++Q N 
Sbjct: 61  SPSNPIQLLPLSD-----------------------------------------SVQDNL 79

Query: 601 QKMLENSSKRLF-VQESSEKYTQESCNLQKIPNGVAQKVIENSSKRVFIQDPPWISSLFM 425
            + LE+S   L  + E  +    ESC                   R+FIQDPPWI+SLF+
Sbjct: 80  VENLESSMNSLMPINEIGQITPLESC------------------PRIFIQDPPWIASLFL 121

Query: 424 KNLYNG----VKLEFREMERRKYNFLRKRQVKAETEAWXXXXXXXXXXXXXXXEKKLAPN 257
           K LY      VKLEF+EM++ KYN LR+RQ+KAETEAW               EKKLAPN
Sbjct: 122 KGLYKRTDQEVKLEFKEMDKSKYNLLRRRQIKAETEAWERMVEEYRELEREMCEKKLAPN 181

Query: 256 LPCIKKMFLNWFEPLRVAIEREXXXXXXXXXXXXXAPNIDCLPADKMAVIVMHKLMALLM 77
           LP +K +FL WFEP R AIERE             AP+ID LPADKMAVIVMHK+M L M
Sbjct: 182 LPYVKALFLGWFEPFRDAIEREQKMQRTDKQKAAFAPHIDALPADKMAVIVMHKMMGLFM 241

Query: 76  MGGKDERSVRVVEAAIQIGVSIEHE 2
            G + E  V+VV+AA+QIG++IE E
Sbjct: 242 AGAQ-EGFVQVVQAAVQIGMAIEQE 265


>XP_018818701.1 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic isoform X1
           [Juglans regia]
          Length = 981

 Score =  174 bits (441), Expect = 2e-44
 Identities = 128/325 (39%), Positives = 157/325 (48%), Gaps = 11/325 (3%)
 Frame = -1

Query: 943 FTPSPRAQ-----WSKSNPKKLQIK-HSNFIFASFSEQIIFSKTSSFSFPHTLKNLPNLH 782
           F PSPRAQ     W +  P K+  K H N  F   S    F K S    P  L    NL 
Sbjct: 7   FYPSPRAQIHPTTWRR--PPKINTKSHKNLYFLFSSNSNTFFKPSLSPTPFPL----NLK 60

Query: 781 SHIHHIKIQPLHDSTENYTQELCNLQKIPQKMLENSSKRVFLQDSSENYTQELCNLQKNS 602
           S  + I++ PL D                                         ++Q N 
Sbjct: 61  SPSNPIQLLPLSD-----------------------------------------SVQDNL 79

Query: 601 QKMLENSSKRLF-VQESSEKYTQESCNLQKIPNGVAQKVIENSSKRVFIQDPPWISSLFM 425
            + LE+S   L  + E  +    ESC                   R+FIQDPPWI+SLF+
Sbjct: 80  VENLESSMNSLMPINEIGQITPLESC------------------PRIFIQDPPWIASLFL 121

Query: 424 KNLYNG----VKLEFREMERRKYNFLRKRQVKAETEAWXXXXXXXXXXXXXXXEKKLAPN 257
           K LY      VKLEF+EM++ KYN LR+RQ+KAETEAW               EKKLAPN
Sbjct: 122 KGLYKRTDQEVKLEFKEMDKSKYNLLRRRQIKAETEAWERMVEEYRELEREMCEKKLAPN 181

Query: 256 LPCIKKMFLNWFEPLRVAIEREXXXXXXXXXXXXXAPNIDCLPADKMAVIVMHKLMALLM 77
           LP +K +FL WFEP R AIERE             AP+ID LPADKMAVIVMHK+M L M
Sbjct: 182 LPYVKALFLGWFEPFRDAIEREQKMQRTDKQKAAFAPHIDALPADKMAVIVMHKMMGLFM 241

Query: 76  MGGKDERSVRVVEAAIQIGVSIEHE 2
            G + E  V+VV+AA+QIG++IE E
Sbjct: 242 AGAQ-EGFVQVVQAAVQIGMAIEQE 265


>XP_004144791.2 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Cucumis
           sativus] KGN61063.1 hypothetical protein Csa_2G036610
           [Cucumis sativus]
          Length = 975

 Score =  173 bits (439), Expect = 4e-44
 Identities = 100/192 (52%), Positives = 123/192 (64%), Gaps = 4/192 (2%)
 Frame = -1

Query: 565 VQESSEKYTQESCNLQKIPNGVAQKVIENSSKRVFIQDPPWISSLFMKNLYN----GVKL 398
           V E+  +    S NLQ   + + Q     SSKR+FIQDPPWI+SLF+K LY      VKL
Sbjct: 71  VHENFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIASLFLKGLYKCVQKEVKL 130

Query: 397 EFREMERRKYNFLRKRQVKAETEAWXXXXXXXXXXXXXXXEKKLAPNLPCIKKMFLNWFE 218
           EF E+E+RKYN LR+RQ+KAETEAW               EKKLAPNLP +KK+FL WFE
Sbjct: 131 EFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKKLFLGWFE 190

Query: 217 PLRVAIEREXXXXXXXXXXXXXAPNIDCLPADKMAVIVMHKLMALLMMGGKDERSVRVVE 38
           PL+ AIE E             AP+I+ L ADKMAVIVM+K+M LLMM  +D   V+VV+
Sbjct: 191 PLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMMAAQD-GCVQVVQ 249

Query: 37  AAIQIGVSIEHE 2
           AA+QIG +IE E
Sbjct: 250 AAVQIGGAIEQE 261


>XP_017250907.1 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Daucus carota subsp. sativus]
          Length = 978

 Score =  173 bits (438), Expect = 6e-44
 Identities = 93/165 (56%), Positives = 116/165 (70%), Gaps = 4/165 (2%)
 Frame = -1

Query: 484 ENSSKRVFIQDPPWISSLFMKNLYN----GVKLEFREMERRKYNFLRKRQVKAETEAWXX 317
           E+ ++RVF+QDPPWI++  M+NLYN     VK++ +EMERRKY  LR+RQVKAETEAW  
Sbjct: 100 EDENQRVFVQDPPWITNFVMRNLYNEDNGNVKVDAKEMERRKYYRLRRRQVKAETEAWES 159

Query: 316 XXXXXXXXXXXXXEKKLAPNLPCIKKMFLNWFEPLRVAIEREXXXXXXXXXXXXXAPNID 137
                        +KKLAPNLP +K++FL WFEPLR AI +E             AP ID
Sbjct: 160 MVEEYRELEREMCDKKLAPNLPYVKQLFLGWFEPLRDAILKEQKSQKSRKHKAAYAPCID 219

Query: 136 CLPADKMAVIVMHKLMALLMMGGKDERSVRVVEAAIQIGVSIEHE 2
           CLPADK+AVIVMHK+MALLM  G++ R VRVV+AA+QIGV+IE E
Sbjct: 220 CLPADKIAVIVMHKMMALLMT-GREGRFVRVVQAAVQIGVAIEQE 263