BLASTX nr result

ID: Lithospermum23_contig00018309 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00018309
         (306 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_016559855.1 PREDICTED: pentatricopeptide repeat-containing pr...    56   5e-07
XP_019152180.1 PREDICTED: pentatricopeptide repeat-containing pr...    54   3e-06

>XP_016559855.1 PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Capsicum annuum] XP_016559856.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Capsicum annuum] XP_016559857.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Capsicum annuum]
          Length = 738

 Score = 56.2 bits (134), Expect = 5e-07
 Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 21/81 (25%)
 Frame = -2

Query: 185 MPSYHSL-PKGISLRLLEKFIPKKWKLKVDR--------------------VNDEYESMV 69
           MPS  S+ P+ +SL L++KFIPK+W+   +                      N   ESMV
Sbjct: 1   MPSPFSVQPRNLSLSLIQKFIPKEWRSVRESDPRNCGQSVPCSSHECISGPCNARNESMV 60

Query: 68  NCLLTILKDFVSQGNLVKAFR 6
           +CLLT LKDFV QG++ KAFR
Sbjct: 61  DCLLTTLKDFVGQGHICKAFR 81


>XP_019152180.1 PREDICTED: pentatricopeptide repeat-containing protein At1g71490
           [Ipomoea nil] XP_019152181.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g71490
           [Ipomoea nil]
          Length = 734

 Score = 53.9 bits (128), Expect = 3e-06
 Identities = 34/75 (45%), Positives = 41/75 (54%), Gaps = 21/75 (28%)
 Frame = -2

Query: 167 LPKGISLRLLEKFIPKKWK--LKVDRVNDEYES-------------------MVNCLLTI 51
           LPK  SL  +EKFIPKKWK  +KV  + +  ES                   MV+CLL  
Sbjct: 8   LPKNFSLFQVEKFIPKKWKQSVKVSDIQNNIESFVSSSHELIVGTHMPYDESMVDCLLLT 67

Query: 50  LKDFVSQGNLVKAFR 6
           LK+FVSQG+L KA R
Sbjct: 68  LKNFVSQGHLAKAVR 82


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