BLASTX nr result

ID: Lithospermum23_contig00018218 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00018218
         (434 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EOY17514.1 Uncharacterized protein TCM_042330 [Theobroma cacao]        49   5e-10
XP_017973011.1 PREDICTED: uncharacterized protein LOC108661357 [...    45   2e-09
XP_019105245.1 PREDICTED: uncharacterized protein LOC109135030 [...    49   4e-06
OMO85295.1 reverse transcriptase [Corchorus capsularis]                47   8e-06

>EOY17514.1 Uncharacterized protein TCM_042330 [Theobroma cacao]
          Length = 2249

 Score = 48.5 bits (114), Expect(2) = 5e-10
 Identities = 23/44 (52%), Positives = 29/44 (65%)
 Frame = -3

Query: 381  YK*GSNVVVTSLAFADDVLIFANDSKKTLSKVMEFLQHYQMFLG 250
            Y  G ++ V+ LAFADDVLIF N SK  L +++ FLQ YQ   G
Sbjct: 1549 YSSGVSISVSHLAFADDVLIFTNGSKSALQRILAFLQEYQEISG 1592



 Score = 42.4 bits (98), Expect(2) = 5e-10
 Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
 Frame = -1

Query: 206  SHSCQMQYCLESSRFKKGEETYIF---IEKIRNKLNSWSSNFLSLERRITLLQSVLTTLT 36
            SH   +   L +  +K  ++  +F   + KI  ++  W +  LS   RITLL+SVL +L 
Sbjct: 1623 SHQLLLITYLGAPLYKGHKKVILFNDLVAKIEERITGWENKILSPGGRITLLRSVLASLP 1682

Query: 35   IYYLQMMQMP 6
            IY LQ+++ P
Sbjct: 1683 IYLLQVLKPP 1692


>XP_017973011.1 PREDICTED: uncharacterized protein LOC108661357 [Theobroma cacao]
          Length = 1329

 Score = 44.7 bits (104), Expect(2) = 2e-09
 Identities = 18/35 (51%), Positives = 28/35 (80%)
 Frame = -3

Query: 366 NVVVTSLAFADDVLIFANDSKKTLSKVMEFLQHYQ 262
           +++V+ LAFADD+LIF N +K +L K++ FLQ Y+
Sbjct: 739 SMLVSHLAFADDILIFTNGAKSSLQKILSFLQEYE 773



 Score = 44.7 bits (104), Expect(2) = 2e-09
 Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
 Frame = -1

Query: 203  HSCQMQYCLESSRFKKGEETYIF---IEKIRNKLNSWSSNFLSLERRITLLQSVLTTLTI 33
            H C     L    +K  ++  +F   +EKIR ++  W +  LS    ITLL+SVL++L I
Sbjct: 809  HKCLPITYLGVPLYKGSKKVMLFDDLVEKIRERIEGWDNKILSPGGLITLLRSVLSSLPI 868

Query: 32   YYLQMMQMP 6
            Y LQ+++ P
Sbjct: 869  YLLQVLKPP 877


>XP_019105245.1 PREDICTED: uncharacterized protein LOC109135030 [Beta vulgaris subsp.
            vulgaris]
          Length = 1564

 Score = 48.9 bits (115), Expect(2) = 4e-06
 Identities = 22/58 (37%), Positives = 36/58 (62%)
 Frame = -1

Query: 179  LESSRFKKGEETYIFIEKIRNKLNSWSSNFLSLERRITLLQSVLTTLTIYYLQMMQMP 6
            L   R KK E  ++ ++K+R KL+ W + FLS   R+TL++S + T+  YY+Q   +P
Sbjct: 966  LSHKRPKKNEVRFV-VDKVRKKLSLWKTKFLSKAGRLTLIKSTMNTIASYYMQACHLP 1022



 Score = 28.9 bits (63), Expect(2) = 4e-06
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = -3

Query: 363  VVVTSLAFADDVLIFANDSKKTLSKVMEFLQHYQMFLGN*LKRIRVLVFYPPKS 202
            V ++ L FADD+LIF    + T  K+ E L  +    G  +   +  + + P +
Sbjct: 885  VAISHLLFADDLLIFGRVDESTAFKLREILDIFSKTSGQKINEGKSRLTFSPNT 938


>OMO85295.1 reverse transcriptase [Corchorus capsularis]
          Length = 1267

 Score = 47.4 bits (111), Expect(2) = 8e-06
 Identities = 25/61 (40%), Positives = 36/61 (59%)
 Frame = -1

Query: 185 YCLESSRFKKGEETYIFIEKIRNKLNSWSSNFLSLERRITLLQSVLTTLTIYYLQMMQMP 6
           Y L +SR KK +  +I ++K+R KL  W S  LS   R+ L QSVL ++  Y +Q   +P
Sbjct: 722 YPLHTSRVKKDDYLFI-VDKMRGKLAGWKSRLLSTAGRLVLTQSVLESIPAYSMQCRALP 780

Query: 5   A 3
           A
Sbjct: 781 A 781



 Score = 29.3 bits (64), Expect(2) = 8e-06
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = -3

Query: 369 SNVVVTSLAFADDVLIFANDSKKTLSKVMEFLQHYQMFLGN*LKRIRVLVFYPPKSLLS 193
           +N V + L FADD+++F    KKT + ++  L  +    G  +   +  VF+   + +S
Sbjct: 641 NNPVFSHLIFADDIVLFGRADKKTATAMVNVLSLFCNESGQCINLEKSKVFFSKNTPMS 699


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