BLASTX nr result

ID: Lithospermum23_contig00017852 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00017852
         (507 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_011072348.1 PREDICTED: chloroplastic group IIA intron splicin...    64   8e-09

>XP_011072348.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Sesamum indicum]
          Length = 821

 Score = 63.9 bits (154), Expect = 8e-09
 Identities = 46/118 (38%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
 Frame = +1

Query: 127 MSTSASKTTQMFTCTSSCITKP---PFRQPLFFLKPFCSSSSLDKL----TRNPLQKFAP 285
           M+ S +K T++     S  + P   P R PL  LKPF SS    KL    ++NP +    
Sbjct: 1   MALSTAKLTELPPHLLSAFSIPRRKPLRSPLLLLKPFSSSLRSTKLPNTSSKNPNRPTTS 60

Query: 286 FSQLCYSSWINQWPKPPPKPAHFVVSSFKERAVENYAPETSKGAAGDSAIDRIVLRLR 459
            S    SSWIN+WP PPP P      +  +  V+N   +T     G +AIDRIVLRLR
Sbjct: 61  SSGS--SSWINKWPSPPPAP-----PTPPKAGVKNTEAKTETIRGGTTAIDRIVLRLR 111


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