BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00017013
         (2342 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010101465.1 hypothetical protein L484_012890 [Morus notabilis...   494   e-158
ONI10047.1 hypothetical protein PRUPE_4G024700 [Prunus persica]       419   e-129
XP_007213705.1 hypothetical protein PRUPE_ppa000684mg [Prunus pe...   419   e-129
OMO76739.1 hypothetical protein CCACVL1_15454 [Corchorus capsula...   408   e-125
XP_019419423.1 PREDICTED: polyadenylation and cleavage factor ho...   403   e-124
XP_006467998.1 PREDICTED: polyadenylation and cleavage factor ho...   402   e-123
XP_006467996.1 PREDICTED: polyadenylation and cleavage factor ho...   402   e-123
XP_015382498.1 PREDICTED: polyadenylation and cleavage factor ho...   402   e-123
CDO99723.1 unnamed protein product [Coffea canephora]                 402   e-123
XP_008462986.1 PREDICTED: polyadenylation and cleavage factor ho...   400   e-122
XP_008462960.1 PREDICTED: polyadenylation and cleavage factor ho...   400   e-122
XP_011037707.1 PREDICTED: polyadenylation and cleavage factor ho...   396   e-122
XP_006449074.1 hypothetical protein CICLE_v10014158mg [Citrus cl...   398   e-121
XP_002518518.1 PREDICTED: polyadenylation and cleavage factor ho...   397   e-121
XP_016683610.1 PREDICTED: polyadenylation and cleavage factor ho...   391   e-120
XP_011037706.1 PREDICTED: polyadenylation and cleavage factor ho...   396   e-120
XP_011037705.1 PREDICTED: polyadenylation and cleavage factor ho...   396   e-120
XP_011037702.1 PREDICTED: polyadenylation and cleavage factor ho...   396   e-120
XP_016753659.1 PREDICTED: polyadenylation and cleavage factor ho...   389   e-119
XP_016683608.1 PREDICTED: polyadenylation and cleavage factor ho...   391   e-118

>XP_010101465.1 hypothetical protein L484_012890 [Morus notabilis] EXB88448.1
            hypothetical protein L484_012890 [Morus notabilis]
          Length = 1022

 Score =  494 bits (1272), Expect = e-158
 Identities = 326/781 (41%), Positives = 412/781 (52%), Gaps = 65/781 (8%)
 Frame = +3

Query: 3    VFCEAYKQVHPSMHSAMHHLFGTWSTVFPLPLLQKIESDLQFSSSENRQSLGLPPLRASE 182
            VFCEAY+QV PS H AM HLFGTWSTVFP  +L KIE+ LQFS S ++QS  LPPLRASE
Sbjct: 153  VFCEAYRQVPPSQHPAMRHLFGTWSTVFPPSVLHKIEAQLQFSPSASQQSSRLPPLRASE 212

Query: 183  SLRPAHDRHINPKYLEVRRQFGHEITDSVNYVGRNFV----------------------- 293
            S RPAH  H+NPKYL   RQ  H   DS+   G + +                       
Sbjct: 213  SPRPAHGIHVNPKYL---RQIEHSAADSLIAGGTSSLKIYSQKPATGAIGRDDELSKWQR 269

Query: 294  -HGHSKNHVRHPAAVRFNNGVDIDRTRALIDAYGIDKRSETIKYPNDEEPTQ------NG 452
               H++N +  PA  + +NG +    RALIDAYG D R+     P+ + P +      NG
Sbjct: 270  KQYHNQNQIEAPAPYKLSNGRERQGPRALIDAYGSDDRNT----PSSDRPLRIERLGTNG 325

Query: 453  IP----TMTWKNSEEEEFDWENMIPTLADHGRKDVFXXXXXXXXXFRNAAPSASHLRQDW 620
            +     +M+W+N+EEEEFDWE+M PTLADHGR + F              P    +R  W
Sbjct: 326  VDHRPSSMSWQNTEEEEFDWEDMSPTLADHGRSEDFLQSSVSSLRSFKPRPD---IRNSW 382

Query: 621  PNQPQLPEVNSSSIVD---VP---YSTAELKNTVYGILNGPTHLQSSSDPQVYWKLAQNV 782
              Q QLP  + SSIV    VP   +    L N +    N P H   S  PQ  W +   +
Sbjct: 383  SGQAQLPAADDSSIVSEDAVPSLGFGRGLLGN-ISRFQNEPNHNLVSRRPQEPWNMPHQL 441

Query: 783  NHSSTHQFSATKGGNNPRMPFGGSGILPPPVKPSSTGYSPEFITQNQGQPFGSRRGSVSL 962
            +  S H  S  +GG N       S +   PV  +        +         SR  S ++
Sbjct: 442  SQPSQHINSRGRGGENM-----SSFVDKLPVVDTQLHVPLTVV---------SRTVSSTI 487

Query: 963  EYVKLEQRIAHEPASSGPWPPRHLHSSHAGPMSHTYQSNRQIRGQLDTLSGKTLLVNQDV 1142
            + +  + R    PAS    PP H+H+SH  P+ H     +  +GQ D ++    + NQ  
Sbjct: 488  DLMNADARSVFVPASVVLRPPVHVHTSHPLPL-HPIMPTQNQQGQYDRINSSNPVKNQAP 546

Query: 1143 HSS----------SISDHNLGSTGSILQNPMLPSGQQFRPIPFNQSLVHTEILLPHSLPQ 1292
              S          S  +  L ST    + P LP  Q     P NQ     + L P  LP 
Sbjct: 547  SKSLYKSGGQQFDSFENKELSST----KLPYLPI-QNAIVAPVNQQN-QMQTLQPQLLPT 600

Query: 1293 DMQH--HLAPPASVVGSSPLSMSQLQRGY-APGHMASVGTIDNNSFMQSPMSTXXXXXXX 1463
               H  +L+  A+ V    +    L  GY + G  AS+ T   N     P++        
Sbjct: 601  QEGHKNYLSSLAAPVPHPVIP--NLGHGYISQGRAASISTGLTNPVPLLPLNLSANNIRN 658

Query: 1464 XXXXXXXXASYTSPISQP--SCGAPKPPVGGD----------YSNLFSSLVAQGVISLNQ 1607
                         P   P  S  A  PP   D          +S L +SL+AQG+ISL +
Sbjct: 659  NSLNLQGGGPPPLPPGPPPNSLQAILPPHNADTAISSEQSGAFSGLINSLMAQGLISLTK 718

Query: 1608 NPSKEDPVGLEFNPDLLKVHHSSAITALFLDLPRQCTTCGLRFKLQEAHSRHMDWHVTKN 1787
                ++PVGLEFN DLLKV H SAI AL+ DL RQCTTCGLRFK QE H  HMDWHVTKN
Sbjct: 719  PNPVQEPVGLEFNVDLLKVRHESAINALYGDLQRQCTTCGLRFKSQEEHRSHMDWHVTKN 778

Query: 1788 RVTRNRKQKPSRKWFVSVNMWLTGAEALRTNSVPDFLPSENIVEKKDDEELAVPADDDQK 1967
            R++++RKQKPSRKWFVS +MWL+GAEAL T++VP FLP+E IVEKK DEE+AVPAD+DQ 
Sbjct: 779  RMSKSRKQKPSRKWFVSTSMWLSGAEALGTDAVPGFLPTETIVEKKSDEEMAVPADEDQN 838

Query: 1968 YCALCGEPFDDFYCHETDEWMYKGAVYTNAPNGSTSCMDNSQLGHIVHAKCRSETGTVSE 2147
             CALCGEPF++FY  ET+EWMYKGAVY NA NGST+ MD SQLG IVHAKCRSE+     
Sbjct: 839  VCALCGEPFEEFYSDETEEWMYKGAVYLNAMNGSTTGMDRSQLGPIVHAKCRSESSVAPS 898

Query: 2148 D 2150
            +
Sbjct: 899  E 899


>ONI10047.1 hypothetical protein PRUPE_4G024700 [Prunus persica]
          Length = 1017

 Score =  419 bits (1076), Expect = e-129
 Identities = 271/658 (41%), Positives = 355/658 (53%), Gaps = 36/658 (5%)
 Frame = +3

Query: 279  GRNFVHGHSKNHVRHPAAVRFNNGVDIDRTRALIDAYGIDKRSETIK-YPNDEEPTQNGI 455
            G+ ++ G  K           +NG++  R RALIDAYG D    ++   P       NG+
Sbjct: 340  GKRYLDGSQKRFDTSVTYNNLSNGLEHQRPRALIDAYGKDSGDRSLNDIPLVGRLGLNGL 399

Query: 456  P----TMTWKNSEEEEFDWENMIPTLADHGRK-DVFXXXXXXXXXFR--------NAAPS 596
                  M+W+N+EEEEFDWE+M PTLA+  R  D           +R        NA+P 
Sbjct: 400  DHKATQMSWQNTEEEEFDWEDMSPTLAEQNRSNDYLPSTAPPSRSYRARPSLGTLNASPL 459

Query: 597  ASHLRQDWPNQPQLPEVNSSSIVD---VP---YSTAELKNTVYGILNGPTHLQSSSDPQV 758
             S  R  W  Q  LP    SS++    VP   +S     +TV    +   H   S  PQ 
Sbjct: 460  ESDSRSTWSTQAHLPSAEQSSVITEDPVPPLGFSRGST-STVSRFQSETNHSLGSRYPQE 518

Query: 759  YWKLAQNVNHSSTHQFSATKGGNNPRMPFGGSGILPPPVKPSS-TGYSPEFITQNQGQ-P 932
             W +  +++ SS +  +A   G N +MPF  SG+     K S+     P+   +  G   
Sbjct: 519  AWNIPFHLSQSSQNPLNARGRGRNFQMPFVASGVSSGGEKMSAFVDKLPDVDARLHGPIA 578

Query: 933  FGSRRGSVSLEYVKLEQRIAHEPASSGPWPPRHLHSSHAGPMSHTYQSNRQIRGQLDTLS 1112
              SR G+ S++ V  + R    P S G  PP ++H+SH  P  H+  + +  R Q  +++
Sbjct: 579  VASRMGASSVDTVNADSRPII-PVSMGSRPPVNVHNSHPPP-GHSIFALQNQRSQYGSIN 636

Query: 1113 GKTLLVNQDVHSSS-ISDHNL-GSTGSILQNPMLP--SGQQFRPIPFNQ-SLVHTEILLP 1277
                + NQ  ++S  + +  L G    +L++  L   + Q  RP+P NQ + V    L P
Sbjct: 637  YSNTVKNQAPYNSLYVPEQQLDGYENKLLRSTKLTQLTSQNARPMPVNQRNQVQASPLQP 696

Query: 1278 HSLP-QDMQHHLAPPASVVGSSPLSMSQLQRGYA-PGHMASVGTIDNNSFMQSPMSTXXX 1451
              LP Q+ + +    A   G   L +  L   Y   GH  +V T+  N   + P      
Sbjct: 697  QFLPPQEARENFISSAETSGPPYLGLPSLNHRYTLQGHGGAVSTVMANPVPRIPYVPNSA 756

Query: 1452 XXXXXXXXXXXXASYTSPISQP--SCGAPKPPV-----GGDYSNLFSSLVAQGVISLNQN 1610
                             P SQ   S   P P V     G  YS LFSSL+AQG+ISL   
Sbjct: 757  LHLRGEALPPLPPGPPPPSSQGILSIRNPGPVVSSNQPGSAYSGLFSSLMAQGLISLTNQ 816

Query: 1611 PSKEDPVGLEFNPDLLKVHHSSAITALFLDLPRQCTTCGLRFKLQEAHSRHMDWHVTKNR 1790
             + +D VG+EFN DLLKV H S I AL+ DLPRQCTTCGLRFK QE HS HMDWHVTKNR
Sbjct: 817  STVQDSVGIEFNADLLKVRHESVIKALYSDLPRQCTTCGLRFKCQEEHSSHMDWHVTKNR 876

Query: 1791 VTRNRKQKPSRKWFVSVNMWLTGAEALRTNSVPDFLPSENIVEKKDDEELAVPADDDQKY 1970
            +++NRKQKPSRKWFV+ +MWL+GAEAL T++ P F+P+E IVEKK DEE+AVPAD+DQ  
Sbjct: 877  MSKNRKQKPSRKWFVNTSMWLSGAEALGTDAAPGFMPAETIVEKKSDEEMAVPADEDQNS 936

Query: 1971 CALCGEPFDDFYCHETDEWMYKGAVYTNAPNGSTSCMDNSQLGHIVHAKCRSETGTVS 2144
            CALCGEPFDDFY  ET+EWMYKGAVY NAP+GST  MD SQLG IVHAKCRSE+  VS
Sbjct: 937  CALCGEPFDDFYSDETEEWMYKGAVYLNAPDGSTGGMDRSQLGPIVHAKCRSESSVVS 994



 Score =  105 bits (261), Expect = 2e-19
 Identities = 53/89 (59%), Positives = 62/89 (69%)
 Frame = +3

Query: 3   VFCEAYKQVHPSMHSAMHHLFGTWSTVFPLPLLQKIESDLQFSSSENRQSLGLPPLRASE 182
           VFCEAY+QV+P+ + AM HLFGTWS VFP  +L++IE  LQFS   N+QS G  PLRASE
Sbjct: 163 VFCEAYRQVNPNQYPAMRHLFGTWSAVFPPSVLRRIEEQLQFSPLVNQQSSGSTPLRASE 222

Query: 183 SLRPAHDRHINPKYLEVRRQFGHEITDSV 269
           S RP H  H+NPKYL   RQ      DSV
Sbjct: 223 SPRPTHGIHVNPKYL---RQLDSSNVDSV 248


>XP_007213705.1 hypothetical protein PRUPE_ppa000684mg [Prunus persica]
          Length = 1037

 Score =  419 bits (1076), Expect = e-129
 Identities = 271/658 (41%), Positives = 355/658 (53%), Gaps = 36/658 (5%)
 Frame = +3

Query: 279  GRNFVHGHSKNHVRHPAAVRFNNGVDIDRTRALIDAYGIDKRSETIK-YPNDEEPTQNGI 455
            G+ ++ G  K           +NG++  R RALIDAYG D    ++   P       NG+
Sbjct: 360  GKRYLDGSQKRFDTSVTYNNLSNGLEHQRPRALIDAYGKDSGDRSLNDIPLVGRLGLNGL 419

Query: 456  P----TMTWKNSEEEEFDWENMIPTLADHGRK-DVFXXXXXXXXXFR--------NAAPS 596
                  M+W+N+EEEEFDWE+M PTLA+  R  D           +R        NA+P 
Sbjct: 420  DHKATQMSWQNTEEEEFDWEDMSPTLAEQNRSNDYLPSTAPPSRSYRARPSLGTLNASPL 479

Query: 597  ASHLRQDWPNQPQLPEVNSSSIVD---VP---YSTAELKNTVYGILNGPTHLQSSSDPQV 758
             S  R  W  Q  LP    SS++    VP   +S     +TV    +   H   S  PQ 
Sbjct: 480  ESDSRSTWSTQAHLPSAEQSSVITEDPVPPLGFSRGST-STVSRFQSETNHSLGSRYPQE 538

Query: 759  YWKLAQNVNHSSTHQFSATKGGNNPRMPFGGSGILPPPVKPSS-TGYSPEFITQNQGQ-P 932
             W +  +++ SS +  +A   G N +MPF  SG+     K S+     P+   +  G   
Sbjct: 539  AWNIPFHLSQSSQNPLNARGRGRNFQMPFVASGVSSGGEKMSAFVDKLPDVDARLHGPIA 598

Query: 933  FGSRRGSVSLEYVKLEQRIAHEPASSGPWPPRHLHSSHAGPMSHTYQSNRQIRGQLDTLS 1112
              SR G+ S++ V  + R    P S G  PP ++H+SH  P  H+  + +  R Q  +++
Sbjct: 599  VASRMGASSVDTVNADSRPII-PVSMGSRPPVNVHNSHPPP-GHSIFALQNQRSQYGSIN 656

Query: 1113 GKTLLVNQDVHSSS-ISDHNL-GSTGSILQNPMLP--SGQQFRPIPFNQ-SLVHTEILLP 1277
                + NQ  ++S  + +  L G    +L++  L   + Q  RP+P NQ + V    L P
Sbjct: 657  YSNTVKNQAPYNSLYVPEQQLDGYENKLLRSTKLTQLTSQNARPMPVNQRNQVQASPLQP 716

Query: 1278 HSLP-QDMQHHLAPPASVVGSSPLSMSQLQRGYA-PGHMASVGTIDNNSFMQSPMSTXXX 1451
              LP Q+ + +    A   G   L +  L   Y   GH  +V T+  N   + P      
Sbjct: 717  QFLPPQEARENFISSAETSGPPYLGLPSLNHRYTLQGHGGAVSTVMANPVPRIPYVPNSA 776

Query: 1452 XXXXXXXXXXXXASYTSPISQP--SCGAPKPPV-----GGDYSNLFSSLVAQGVISLNQN 1610
                             P SQ   S   P P V     G  YS LFSSL+AQG+ISL   
Sbjct: 777  LHLRGEALPPLPPGPPPPSSQGILSIRNPGPVVSSNQPGSAYSGLFSSLMAQGLISLTNQ 836

Query: 1611 PSKEDPVGLEFNPDLLKVHHSSAITALFLDLPRQCTTCGLRFKLQEAHSRHMDWHVTKNR 1790
             + +D VG+EFN DLLKV H S I AL+ DLPRQCTTCGLRFK QE HS HMDWHVTKNR
Sbjct: 837  STVQDSVGIEFNADLLKVRHESVIKALYSDLPRQCTTCGLRFKCQEEHSSHMDWHVTKNR 896

Query: 1791 VTRNRKQKPSRKWFVSVNMWLTGAEALRTNSVPDFLPSENIVEKKDDEELAVPADDDQKY 1970
            +++NRKQKPSRKWFV+ +MWL+GAEAL T++ P F+P+E IVEKK DEE+AVPAD+DQ  
Sbjct: 897  MSKNRKQKPSRKWFVNTSMWLSGAEALGTDAAPGFMPAETIVEKKSDEEMAVPADEDQNS 956

Query: 1971 CALCGEPFDDFYCHETDEWMYKGAVYTNAPNGSTSCMDNSQLGHIVHAKCRSETGTVS 2144
            CALCGEPFDDFY  ET+EWMYKGAVY NAP+GST  MD SQLG IVHAKCRSE+  VS
Sbjct: 957  CALCGEPFDDFYSDETEEWMYKGAVYLNAPDGSTGGMDRSQLGPIVHAKCRSESSVVS 1014



 Score =  103 bits (257), Expect = 6e-19
 Identities = 52/88 (59%), Positives = 61/88 (69%)
 Frame = +3

Query: 3   VFCEAYKQVHPSMHSAMHHLFGTWSTVFPLPLLQKIESDLQFSSSENRQSLGLPPLRASE 182
           VFCEAY+QV+P+ + AM HLFGTWS VFP  +L++IE  LQFS   N+QS G  PLRASE
Sbjct: 163 VFCEAYRQVNPNQYPAMRHLFGTWSAVFPPSVLRRIEEQLQFSPLVNQQSSGSTPLRASE 222

Query: 183 SLRPAHDRHINPKYLEVRRQFGHEITDS 266
           S RP H  H+NPKYL   RQ      DS
Sbjct: 223 SPRPTHGIHVNPKYL---RQLDSSNVDS 247


>OMO76739.1 hypothetical protein CCACVL1_15454 [Corchorus capsularis]
          Length = 1003

 Score =  408 bits (1048), Expect = e-125
 Identities = 263/638 (41%), Positives = 338/638 (52%), Gaps = 28/638 (4%)
 Frame = +3

Query: 336  RFNNGVDIDRTRALIDAYGIDKRSETIKYPNDEEPTQ-NG----IPTMTWKNSEEEEFDW 500
            + +NG +    RALIDAYG D+       P   E    NG    +  ++W+N+EEEEFDW
Sbjct: 361  KLSNGHERQTPRALIDAYGNDRGKGFNSKPVQVERLDVNGMGHKVTPISWQNTEEEEFDW 420

Query: 501  ENMIPTLADHGRKDVFXXXXXXXXXFRNAAPSA--SHLRQDWPNQPQLPEVNSSSIVDVP 674
            E+M PTLAD GR + +            A P+   S+ R     Q QLP V+ SS +  P
Sbjct: 421  EDMSPTLADRGRSNDYSLSSAPTFGSIGARPAGLESNSRSSRTTQTQLPLVDDSSTI--P 478

Query: 675  YSTAELKNTVYGILNGPTHLQSSSDPQVYWKLAQNVNHSSTHQFSATKGGNNPRMPFGGS 854
                   ++  G+      +  S  PQ  W  +Q    S TH   A   G +  +PF  S
Sbjct: 479  EDAIPSMSSGRGL----NPILRSHYPQEAWNSSQRFPQS-THHLHAKGRGRDFHLPFSAS 533

Query: 855  GILP-------PPVKPSSTGYSPEFITQNQGQPFGSRRGSVSLEYVKLEQRIAHEPASSG 1013
            GI         P +   + G S     Q +      R GS  L+ V    R A  P+++G
Sbjct: 534  GISSLGGENSVPLIDKLADGGS-----QFRPPAILPRAGSSGLDSVPHGARPAIIPSTTG 588

Query: 1014 PWPPRHLHSSHAGPMSHTYQSNRQIRGQLDTLSGKTLLVNQDVHSSSISDHNLGS----T 1181
             WPP ++H S        Y   +  R Q D+++    ++N      S       S     
Sbjct: 589  VWPPVNVHKSQPPTTRPNYSLQQHSRSQFDSINPINAVMNHGPAKQSYMPEQFDSFESKD 648

Query: 1182 GSILQNPMLPSGQQFRPIPFNQSLVHTEILLPHSLP-QDMQHHLAPPASVVGSSPLSMSQ 1358
             S+ + P LP     RP    ++      L P  LP Q+++ +    A+      ++ + 
Sbjct: 649  QSLTRVPQLPDQ---RPALHQRNQFQATSLQPQFLPSQELRENFLASATAPLPPRIAAAS 705

Query: 1359 LQRGYAPG-HMASVGTIDNNSFMQSPMSTXXXXXXXXXXXXXXXASYTSPISQPSCGA-- 1529
            L  GY P  H A    I +  F    MST                    P+SQ   G   
Sbjct: 706  LNHGYTPQMHGAVNSMIPSIPFPNPNMSTGSLRLQGGPSPPLPPGP--PPVSQMMPGTQN 763

Query: 1530 -----PKPPVGGDYSNLFSSLVAQGVISLNQNPSKEDPVGLEFNPDLLKVHHSSAITALF 1694
                 P  P GG +S L SSL+AQG+ISL      +DP+GLEFN DLLKV H SAI+AL+
Sbjct: 764  TGPLLPNQPQGGAFSGLISSLMAQGLISLTTPTPVQDPLGLEFNADLLKVRHESAISALY 823

Query: 1695 LDLPRQCTTCGLRFKLQEAHSRHMDWHVTKNRVTRNRKQKPSRKWFVSVNMWLTGAEALR 1874
             DLPRQCTTCGLRFK+QE HS HMDWHVT+NR+++NRKQKPSRKWFVS +MWL+GAEAL 
Sbjct: 824  SDLPRQCTTCGLRFKIQEEHSAHMDWHVTRNRMSKNRKQKPSRKWFVSASMWLSGAEALG 883

Query: 1875 TNSVPDFLPSENIVEKKDDEELAVPADDDQKYCALCGEPFDDFYCHETDEWMYKGAVYTN 2054
            T+SVP FLP+EN+VEKKDDEELAVPAD+DQ  CALCGEPFDDF+  ET+EWMY+GAVY  
Sbjct: 884  TDSVPGFLPTENVVEKKDDEELAVPADEDQSVCALCGEPFDDFFSDETEEWMYRGAVYMK 943

Query: 2055 APNGSTSCMDNSQLGHIVHAKCRSETGTV-SEDMKKCD 2165
            APNG    MD SQLG IVHAKCRSE+  V  ED  + D
Sbjct: 944  APNGLYEGMDRSQLGPIVHAKCRSESSAVPPEDFVRYD 981



 Score =  102 bits (253), Expect = 2e-18
 Identities = 48/80 (60%), Positives = 60/80 (75%)
 Frame = +3

Query: 3   VFCEAYKQVHPSMHSAMHHLFGTWSTVFPLPLLQKIESDLQFSSSENRQSLGLPPLRASE 182
           VF EAY+QV+P+++ AM HLFGTWS VFP  +L+KIE+ LQFS S N+QS G+  LR+SE
Sbjct: 128 VFIEAYRQVNPNLYPAMRHLFGTWSAVFPPSVLRKIETQLQFSQSANQQSSGVTSLRSSE 187

Query: 183 SLRPAHDRHINPKYLEVRRQ 242
           S RP H  H+NPKYL    Q
Sbjct: 188 SPRPTHGIHVNPKYLRQLEQ 207


>XP_019419423.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X2 [Lupinus angustifolius]
          Length = 874

 Score =  403 bits (1036), Expect = e-124
 Identities = 282/766 (36%), Positives = 377/766 (49%), Gaps = 57/766 (7%)
 Frame = +3

Query: 3    VFCEAYKQVHPSMHSAMHHLFGTWSTVFPLPLLQKIESDLQFSSS-ENRQSLGLPPLRAS 179
            VFCE Y+ V P+MHSAM +LFGTWS VFP  +L KIES LQFS +  N QS  + PL AS
Sbjct: 122  VFCEVYRHVQPNMHSAMRYLFGTWSKVFPPSVLCKIESQLQFSDAVNNSQSSSINPLMAS 181

Query: 180  ESLRPAHDRHINPKYLE-------VRRQFGHEITDSVNYVGRN---------------FV 293
            ES R  H  H NPKYL        +    G E  +S   + +                 V
Sbjct: 182  ESTRATHGIHANPKYLRQMERSSAIMDTVGGERLESAGTLAKAPGREEELSEWQRKQYSV 241

Query: 294  HGHSKNHVRHPAAVRFNNGVDIDRTRALIDAYGIDKRSETIKYPN------DEEPTQNGI 455
            HG  +       +   NNG      ++LIDAYG DKR ET           D     N +
Sbjct: 242  HGRKRLRTSMTYSDSLNNGQQHPSPKSLIDAYGTDKRQETSGNKALSIEWLDRNGVDNKV 301

Query: 456  PTMTWKNSEEEEFDWENMIPTLADHGRKDVFXXXXXXXXXFRNAAPSASHLRQDWPNQPQ 635
               +W+N++EEEF+WE M PTL D  R + F           NA  S    ++   +  Q
Sbjct: 302  LATSWQNTQEEEFNWEEMSPTLVDRRRNNAFFKERPFIVA-TNANSSEQDTKKSLSSGSQ 360

Query: 636  LPEVNSSSIVDVPYSTAELKNTVYGILNGPTHLQSSSDPQVYWKLAQNVNHS--STHQFS 809
             P V+ SS+V    +   L ++ YG ++   H Q S        L   +N +  S+  F 
Sbjct: 361  HPAVDDSSVV----AEHALSSSAYGCVS---HGQMSG-------LQNQINQTLGSSQHFD 406

Query: 810  ATKGGNNPRMP----FGGSG----ILPPPVKPSSTGYSPEFITQNQGQPFGSRRGSVS-- 959
            A K GN+P       F   G    +L PP+           I      P+GSR    S  
Sbjct: 407  AWKIGNHPSNSSQHLFNSRGSEMSLLKPPIGN---------IPNTHVNPYGSRPTMPSIV 457

Query: 960  --LEYVKLEQRIAHEPASSGPWPPRHLHSSHAGPMSHTYQSNRQIRGQLDTLSGKTLLVN 1133
              L+Y  +E R    PAS       + H++    ++H +     +R Q    +  T+ V+
Sbjct: 458  PGLKY-NVEARPPAFPASFEMSNSVNEHATGPPRLNHIFPLQNHVRSQFAVNANNTI-VS 515

Query: 1134 QDVHSSSISDHNLGSTGSILQNPMLPSGQQFRPIPFNQSLVHTEILLPHSLPQDMQHH-L 1310
             D H S  +      +   + N  +  GQ  +  P NQ        LP  +  + Q+H  
Sbjct: 516  HDPHKSLFTHKQPSDS---VDNKNISKGQHHQ-FP-NQ--------LPGLVSSNQQNHGQ 562

Query: 1311 APPASVVGSSPLSMSQLQRGYA-PGHMASVGTIDNNSFMQSPMSTXXXXXXXXXXXXXXX 1487
            AP    + S   + SQ   G    GH A +    +N                        
Sbjct: 563  APQLQFLSSQASAASQFSHGGTLQGHGAPISASVSNPLPTMKFPLPGQYITNNSLHLQGG 622

Query: 1488 ASYTSPISQPSCGAPKPPVGGD-----------YSNLFSSLVAQGVISLNQNPSKEDPVG 1634
            A    P S+P   +  P                YSNL SSL+AQG+IS+   P+++D VG
Sbjct: 623  ALPRLPPSRPPAPSQIPHPNASPFVSSQQPTPAYSNLISSLMAQGLISMTNEPTRQDSVG 682

Query: 1635 LEFNPDLLKVHHSSAITALFLDLPRQCTTCGLRFKLQEAHSRHMDWHVTKNRVTRNRKQK 1814
             +F+PD+LKV H  AI+ L+ +LPRQC TCGLRFK Q+ H  HMDWHVTKNR+++NRKQ 
Sbjct: 683  TKFDPDILKVRHEVAISDLYDNLPRQCKTCGLRFKCQDDHRSHMDWHVTKNRMSKNRKQN 742

Query: 1815 PSRKWFVSVNMWLTGAEALRTNSVPDFLPSE-NIVEKKDDEELAVPADDDQKYCALCGEP 1991
            PSRKWFVS  MWL+GAEA+   SVP F P+E ++ EKKDDEELAV A++DQ  CALC EP
Sbjct: 743  PSRKWFVSRRMWLSGAEAMGKESVPGFSPTETSVEEKKDDEELAVLAEEDQNTCALCEEP 802

Query: 1992 FDDFYCHETDEWMYKGAVYTNAPNGSTSCMDNSQLGHIVHAKCRSE 2129
            F+ FY  ET++WMY+ AVY NAP G+T  M+ SQLG I+HAKC+SE
Sbjct: 803  FEKFYSDETEDWMYREAVYLNAPKGTTEGMERSQLGPIIHAKCKSE 848


>XP_006467998.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X5
            [Citrus sinensis]
          Length = 941

 Score =  402 bits (1034), Expect = e-123
 Identities = 268/674 (39%), Positives = 345/674 (51%), Gaps = 46/674 (6%)
 Frame = +3

Query: 276  VGRNFVHGHSKNHVRHPA---AVRFNNGVDIDRTRALIDAYGIDKRSETIKYPNDEEPTQ 446
            +GRN      +N  R  +   +   +NG +    RALIDAYG D+R+   K P       
Sbjct: 275  IGRNEEVSEWRNPNRFESTSTSYNLSNGHEHQGPRALIDAYGSDRRASNNKPPQVGHMGI 334

Query: 447  NG----IPTMTWKNSEEEEFDWENMIPTLADHGRKDVFXXXXXXXXXFRNAAPSASHL-- 608
            NG    + + +W+N+EEEEFDWE+M PTL D GRK+ F            A P  S L  
Sbjct: 335  NGMGNKVASRSWQNTEEEEFDWEDMSPTLLDRGRKNDFLPSSVPLYGSTGARPDFSKLNA 394

Query: 609  -------RQDWPNQPQLPEVNSSSIVDVP----YSTAELKNTVYGILNGPTHLQSSSDPQ 755
                   R +  +Q QLP ++ SS+          +      V G  + P     S  PQ
Sbjct: 395  SSLESDVRTNHSSQAQLPLLDDSSVTAEDSVSLLGSGRGTGKVSGFQSEPNQNLGSRYPQ 454

Query: 756  VYWKLAQNVNHSSTHQFSATKGGNNPRMPFGGSGILPPPVKPSSTGYSPEFITQN----Q 923
              W L  + + SS H  +    G +  +PF GSG+ P      +  Y  +F+  +    +
Sbjct: 455  ESWNLPHHFSRSS-HPPNGRGRGRDSHIPFPGSGV-PSLGVDKAAPYIDKFVGADAQFVR 512

Query: 924  GQPFGSRRGSVSLEYVKLEQRIAHEPASSGPWPPRHLHSSHAGPMSHTYQSNRQIRGQLD 1103
                 SR GS   + +          +S+G W P +LH  H  P    Y   +Q R Q D
Sbjct: 513  PPAVVSRIGSSGPDLLST----GAIQSSTGAWAPMNLHKPHLPPGQPVYPQQKQTRTQFD 568

Query: 1104 TLSGKTLLVNQDVHSSSISDHNLGSTGSILQNPMLPSGQQFRPIPFNQSLVH------TE 1265
            +++    ++NQ     S S +N  S    L  P L   Q   P   NQ          T 
Sbjct: 569  SINAAGRILNQ---GPSKSLYNSESKELSLMKPQLHD-QHATPNQQNQGRAQFLSQEATN 624

Query: 1266 ILLPHSLPQDMQHHLAPPASVVGSSPLSMSQLQRGYAP-GHMASVGTIDNN--------- 1415
              LP        H LAPP             L  GY   GH A +G + +N         
Sbjct: 625  NFLPSIAASMPPHPLAPP-------------LSHGYTQRGHNAVMGMVSSNPVPAGQQPL 671

Query: 1416 ---SFMQSPMSTXXXXXXXXXXXXXXXASYTSPISQPSCG--APKPPVGGDYSNLFSSLV 1580
               S   S +                 +S   P SQ S G   P    G  +S L SSL+
Sbjct: 672  HVQSIQNSSLHLQGRPAPPLPPGPPPASSQMIPGSQ-SAGLVVPSQQPGHAFSGLISSLM 730

Query: 1581 AQGVISLNQNPSKEDPVGLEFNPDLLKVHHSSAITALFLDLPRQCTTCGLRFKLQEAHSR 1760
            AQG+ISL      +D VGLEFN DL K+ H SAI++L+ +LPRQCTTCGLRFK QE HS 
Sbjct: 731  AQGLISLTTQTPVQDSVGLEFNADLHKLRHESAISSLYANLPRQCTTCGLRFKCQEEHSS 790

Query: 1761 HMDWHVTKNRVTRNRKQKPSRKWFVSVNMWLTGAEALRTNSVPDFLPSENIVEKKDDEEL 1940
            HMDWHVTKNR+++NRKQKPSRKWFVS +MWL+G EAL T+++P FLP+E IVEKKDDEE+
Sbjct: 791  HMDWHVTKNRMSKNRKQKPSRKWFVSASMWLSGTEALGTDAIPGFLPAEPIVEKKDDEEM 850

Query: 1941 AVPADDDQKYCALCGEPFDDFYCHETDEWMYKGAVYTNAPNGSTSCMDNSQLGHIVHAKC 2120
            AVPAD+DQ  CALCGEPFDDFY  ET+EWMYKGA+Y NAPNGST  M+ SQLG IVHAKC
Sbjct: 851  AVPADEDQNVCALCGEPFDDFYSDETEEWMYKGAIYMNAPNGSTEGMERSQLGPIVHAKC 910

Query: 2121 RSETGTV-SEDMKK 2159
            RSE+  + S+D K+
Sbjct: 911  RSESTVIPSDDFKR 924



 Score =  119 bits (299), Expect = 5e-24
 Identities = 58/89 (65%), Positives = 69/89 (77%)
 Frame = +3

Query: 3   VFCEAYKQVHPSMHSAMHHLFGTWSTVFPLPLLQKIESDLQFSSSENRQSLGLPPLRASE 182
           VFCEAY+QVHP ++SAM HLFGTWSTVFP  +L+KIE++LQFSS  N+QS  +  LRASE
Sbjct: 116 VFCEAYRQVHPDLYSAMQHLFGTWSTVFPQAVLRKIEAELQFSSQVNKQSSNVNSLRASE 175

Query: 183 SLRPAHDRHINPKYLEVRRQFGHEITDSV 269
           S RP H  H+NPKY+   RQF H  TDSV
Sbjct: 176 SPRPTHGIHVNPKYI---RQFEHSNTDSV 201


>XP_006467996.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
            [Citrus sinensis] XP_006467997.1 PREDICTED:
            polyadenylation and cleavage factor homolog 4 isoform X3
            [Citrus sinensis] XP_015382499.1 PREDICTED:
            polyadenylation and cleavage factor homolog 4 isoform X4
            [Citrus sinensis]
          Length = 975

 Score =  402 bits (1034), Expect = e-123
 Identities = 268/674 (39%), Positives = 345/674 (51%), Gaps = 46/674 (6%)
 Frame = +3

Query: 276  VGRNFVHGHSKNHVRHPA---AVRFNNGVDIDRTRALIDAYGIDKRSETIKYPNDEEPTQ 446
            +GRN      +N  R  +   +   +NG +    RALIDAYG D+R+   K P       
Sbjct: 309  IGRNEEVSEWRNPNRFESTSTSYNLSNGHEHQGPRALIDAYGSDRRASNNKPPQVGHMGI 368

Query: 447  NG----IPTMTWKNSEEEEFDWENMIPTLADHGRKDVFXXXXXXXXXFRNAAPSASHL-- 608
            NG    + + +W+N+EEEEFDWE+M PTL D GRK+ F            A P  S L  
Sbjct: 369  NGMGNKVASRSWQNTEEEEFDWEDMSPTLLDRGRKNDFLPSSVPLYGSTGARPDFSKLNA 428

Query: 609  -------RQDWPNQPQLPEVNSSSIVDVP----YSTAELKNTVYGILNGPTHLQSSSDPQ 755
                   R +  +Q QLP ++ SS+          +      V G  + P     S  PQ
Sbjct: 429  SSLESDVRTNHSSQAQLPLLDDSSVTAEDSVSLLGSGRGTGKVSGFQSEPNQNLGSRYPQ 488

Query: 756  VYWKLAQNVNHSSTHQFSATKGGNNPRMPFGGSGILPPPVKPSSTGYSPEFITQN----Q 923
              W L  + + SS H  +    G +  +PF GSG+ P      +  Y  +F+  +    +
Sbjct: 489  ESWNLPHHFSRSS-HPPNGRGRGRDSHIPFPGSGV-PSLGVDKAAPYIDKFVGADAQFVR 546

Query: 924  GQPFGSRRGSVSLEYVKLEQRIAHEPASSGPWPPRHLHSSHAGPMSHTYQSNRQIRGQLD 1103
                 SR GS   + +          +S+G W P +LH  H  P    Y   +Q R Q D
Sbjct: 547  PPAVVSRIGSSGPDLLST----GAIQSSTGAWAPMNLHKPHLPPGQPVYPQQKQTRTQFD 602

Query: 1104 TLSGKTLLVNQDVHSSSISDHNLGSTGSILQNPMLPSGQQFRPIPFNQSLVH------TE 1265
            +++    ++NQ     S S +N  S    L  P L   Q   P   NQ          T 
Sbjct: 603  SINAAGRILNQ---GPSKSLYNSESKELSLMKPQLHD-QHATPNQQNQGRAQFLSQEATN 658

Query: 1266 ILLPHSLPQDMQHHLAPPASVVGSSPLSMSQLQRGYAP-GHMASVGTIDNN--------- 1415
              LP        H LAPP             L  GY   GH A +G + +N         
Sbjct: 659  NFLPSIAASMPPHPLAPP-------------LSHGYTQRGHNAVMGMVSSNPVPAGQQPL 705

Query: 1416 ---SFMQSPMSTXXXXXXXXXXXXXXXASYTSPISQPSCG--APKPPVGGDYSNLFSSLV 1580
               S   S +                 +S   P SQ S G   P    G  +S L SSL+
Sbjct: 706  HVQSIQNSSLHLQGRPAPPLPPGPPPASSQMIPGSQ-SAGLVVPSQQPGHAFSGLISSLM 764

Query: 1581 AQGVISLNQNPSKEDPVGLEFNPDLLKVHHSSAITALFLDLPRQCTTCGLRFKLQEAHSR 1760
            AQG+ISL      +D VGLEFN DL K+ H SAI++L+ +LPRQCTTCGLRFK QE HS 
Sbjct: 765  AQGLISLTTQTPVQDSVGLEFNADLHKLRHESAISSLYANLPRQCTTCGLRFKCQEEHSS 824

Query: 1761 HMDWHVTKNRVTRNRKQKPSRKWFVSVNMWLTGAEALRTNSVPDFLPSENIVEKKDDEEL 1940
            HMDWHVTKNR+++NRKQKPSRKWFVS +MWL+G EAL T+++P FLP+E IVEKKDDEE+
Sbjct: 825  HMDWHVTKNRMSKNRKQKPSRKWFVSASMWLSGTEALGTDAIPGFLPAEPIVEKKDDEEM 884

Query: 1941 AVPADDDQKYCALCGEPFDDFYCHETDEWMYKGAVYTNAPNGSTSCMDNSQLGHIVHAKC 2120
            AVPAD+DQ  CALCGEPFDDFY  ET+EWMYKGA+Y NAPNGST  M+ SQLG IVHAKC
Sbjct: 885  AVPADEDQNVCALCGEPFDDFYSDETEEWMYKGAIYMNAPNGSTEGMERSQLGPIVHAKC 944

Query: 2121 RSETGTV-SEDMKK 2159
            RSE+  + S+D K+
Sbjct: 945  RSESTVIPSDDFKR 958



 Score =  119 bits (299), Expect = 5e-24
 Identities = 58/89 (65%), Positives = 69/89 (77%)
 Frame = +3

Query: 3   VFCEAYKQVHPSMHSAMHHLFGTWSTVFPLPLLQKIESDLQFSSSENRQSLGLPPLRASE 182
           VFCEAY+QVHP ++SAM HLFGTWSTVFP  +L+KIE++LQFSS  N+QS  +  LRASE
Sbjct: 150 VFCEAYRQVHPDLYSAMQHLFGTWSTVFPQAVLRKIEAELQFSSQVNKQSSNVNSLRASE 209

Query: 183 SLRPAHDRHINPKYLEVRRQFGHEITDSV 269
           S RP H  H+NPKY+   RQF H  TDSV
Sbjct: 210 SPRPTHGIHVNPKYI---RQFEHSNTDSV 235


>XP_015382498.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
            [Citrus sinensis]
          Length = 1012

 Score =  402 bits (1034), Expect = e-123
 Identities = 268/674 (39%), Positives = 345/674 (51%), Gaps = 46/674 (6%)
 Frame = +3

Query: 276  VGRNFVHGHSKNHVRHPA---AVRFNNGVDIDRTRALIDAYGIDKRSETIKYPNDEEPTQ 446
            +GRN      +N  R  +   +   +NG +    RALIDAYG D+R+   K P       
Sbjct: 346  IGRNEEVSEWRNPNRFESTSTSYNLSNGHEHQGPRALIDAYGSDRRASNNKPPQVGHMGI 405

Query: 447  NG----IPTMTWKNSEEEEFDWENMIPTLADHGRKDVFXXXXXXXXXFRNAAPSASHL-- 608
            NG    + + +W+N+EEEEFDWE+M PTL D GRK+ F            A P  S L  
Sbjct: 406  NGMGNKVASRSWQNTEEEEFDWEDMSPTLLDRGRKNDFLPSSVPLYGSTGARPDFSKLNA 465

Query: 609  -------RQDWPNQPQLPEVNSSSIVDVP----YSTAELKNTVYGILNGPTHLQSSSDPQ 755
                   R +  +Q QLP ++ SS+          +      V G  + P     S  PQ
Sbjct: 466  SSLESDVRTNHSSQAQLPLLDDSSVTAEDSVSLLGSGRGTGKVSGFQSEPNQNLGSRYPQ 525

Query: 756  VYWKLAQNVNHSSTHQFSATKGGNNPRMPFGGSGILPPPVKPSSTGYSPEFITQN----Q 923
              W L  + + SS H  +    G +  +PF GSG+ P      +  Y  +F+  +    +
Sbjct: 526  ESWNLPHHFSRSS-HPPNGRGRGRDSHIPFPGSGV-PSLGVDKAAPYIDKFVGADAQFVR 583

Query: 924  GQPFGSRRGSVSLEYVKLEQRIAHEPASSGPWPPRHLHSSHAGPMSHTYQSNRQIRGQLD 1103
                 SR GS   + +          +S+G W P +LH  H  P    Y   +Q R Q D
Sbjct: 584  PPAVVSRIGSSGPDLLST----GAIQSSTGAWAPMNLHKPHLPPGQPVYPQQKQTRTQFD 639

Query: 1104 TLSGKTLLVNQDVHSSSISDHNLGSTGSILQNPMLPSGQQFRPIPFNQSLVH------TE 1265
            +++    ++NQ     S S +N  S    L  P L   Q   P   NQ          T 
Sbjct: 640  SINAAGRILNQ---GPSKSLYNSESKELSLMKPQLHD-QHATPNQQNQGRAQFLSQEATN 695

Query: 1266 ILLPHSLPQDMQHHLAPPASVVGSSPLSMSQLQRGYAP-GHMASVGTIDNN--------- 1415
              LP        H LAPP             L  GY   GH A +G + +N         
Sbjct: 696  NFLPSIAASMPPHPLAPP-------------LSHGYTQRGHNAVMGMVSSNPVPAGQQPL 742

Query: 1416 ---SFMQSPMSTXXXXXXXXXXXXXXXASYTSPISQPSCG--APKPPVGGDYSNLFSSLV 1580
               S   S +                 +S   P SQ S G   P    G  +S L SSL+
Sbjct: 743  HVQSIQNSSLHLQGRPAPPLPPGPPPASSQMIPGSQ-SAGLVVPSQQPGHAFSGLISSLM 801

Query: 1581 AQGVISLNQNPSKEDPVGLEFNPDLLKVHHSSAITALFLDLPRQCTTCGLRFKLQEAHSR 1760
            AQG+ISL      +D VGLEFN DL K+ H SAI++L+ +LPRQCTTCGLRFK QE HS 
Sbjct: 802  AQGLISLTTQTPVQDSVGLEFNADLHKLRHESAISSLYANLPRQCTTCGLRFKCQEEHSS 861

Query: 1761 HMDWHVTKNRVTRNRKQKPSRKWFVSVNMWLTGAEALRTNSVPDFLPSENIVEKKDDEEL 1940
            HMDWHVTKNR+++NRKQKPSRKWFVS +MWL+G EAL T+++P FLP+E IVEKKDDEE+
Sbjct: 862  HMDWHVTKNRMSKNRKQKPSRKWFVSASMWLSGTEALGTDAIPGFLPAEPIVEKKDDEEM 921

Query: 1941 AVPADDDQKYCALCGEPFDDFYCHETDEWMYKGAVYTNAPNGSTSCMDNSQLGHIVHAKC 2120
            AVPAD+DQ  CALCGEPFDDFY  ET+EWMYKGA+Y NAPNGST  M+ SQLG IVHAKC
Sbjct: 922  AVPADEDQNVCALCGEPFDDFYSDETEEWMYKGAIYMNAPNGSTEGMERSQLGPIVHAKC 981

Query: 2121 RSETGTV-SEDMKK 2159
            RSE+  + S+D K+
Sbjct: 982  RSESTVIPSDDFKR 995



 Score =  118 bits (295), Expect = 2e-23
 Identities = 57/88 (64%), Positives = 68/88 (77%)
 Frame = +3

Query: 3   VFCEAYKQVHPSMHSAMHHLFGTWSTVFPLPLLQKIESDLQFSSSENRQSLGLPPLRASE 182
           VFCEAY+QVHP ++SAM HLFGTWSTVFP  +L+KIE++LQFSS  N+QS  +  LRASE
Sbjct: 150 VFCEAYRQVHPDLYSAMQHLFGTWSTVFPQAVLRKIEAELQFSSQVNKQSSNVNSLRASE 209

Query: 183 SLRPAHDRHINPKYLEVRRQFGHEITDS 266
           S RP H  H+NPKY+   RQF H  TDS
Sbjct: 210 SPRPTHGIHVNPKYI---RQFEHSNTDS 234


>CDO99723.1 unnamed protein product [Coffea canephora]
          Length = 1005

 Score =  402 bits (1032), Expect = e-123
 Identities = 260/652 (39%), Positives = 345/652 (52%), Gaps = 40/652 (6%)
 Frame = +3

Query: 330  AVRFNNGVDIDRTRALIDAYGIDKRSE--TIKYPNDEEPTQNGI----PTMTWKNSEEEE 491
            A R+NNG+D+DR RALIDAYGID+R +  + K+   +    NGI       TW+N+EEEE
Sbjct: 349  AYRYNNGIDLDRPRALIDAYGIDEREKPPSHKHLKVDHSIVNGINKSASLKTWQNTEEEE 408

Query: 492  FDWENMIPTLADHGRK-DVFXXXXXXXXXFRNAAPSASH---------LRQDWPNQPQLP 641
            F+WE+M PTL D  R  D+F         FR      +H          R ++  Q QLP
Sbjct: 409  FNWEDMSPTLGDSSRNNDLFSSSIPPSANFRTRPGFRTHPDPHLATSDFRSNFSKQAQLP 468

Query: 642  EVNSSSIVDVPYSTAELKNT---VYGILNGPTHLQSSSDPQVYWKLAQNVNHSSTHQFSA 812
              + SS  +   + + ++     V G  +   H+ SS  P+  + + Q+   SS    S 
Sbjct: 469  IFSDSSPSENVSAVSSVRGVIKKVAGFRDENKHVSSSHFPKDGFSMPQSHGRSSQQHLSI 528

Query: 813  TKGGNNPRMPFGGSGILPPP-VKPSSTGYSPEFITQNQG-QPFGSRRGSVSLEYVKLEQR 986
               G N +M F G GI P    KP S    P    + +G     SR GS     +  E +
Sbjct: 529  KGSGRNHQMSFSGMGIAPSSEYKPPSVSNFPNADPRIRGPSAVVSRIGSSGFASLTPEMQ 588

Query: 987  IAHEPASSGPWPPRHLHSSHAGPMSHTYQSNRQIRGQLDTLSGKTLLVNQDVHSSSISDH 1166
                PAS G  P  ++ +S+   +  +   + QI  Q D +       +Q +   +    
Sbjct: 589  SIATPASMGVPPSVNIRASYHQALLASPPMHEQIGYQPDAVG------HQGMTMPNFPGQ 642

Query: 1167 NLGSTGSILQNPMLPSGQQFRPIPFNQSL---VHTEILLPHSLP-QDMQHHLAPPASVVG 1334
             LGS  +   +   PS Q    IP N  +   V+     P  LP Q+ + ++ PP   + 
Sbjct: 643  QLGSIENKPVSMPQPSNQPRGLIPPNLQVGPHVNLSYSQPQPLPSQEARQNMVPPVPYLP 702

Query: 1335 SSPLSMSQLQRGYAP---GHMASVGT----IDNNSFMQSPMSTXXXXXXXXXXXXXXXAS 1493
             S L    L  GY P   G  A +GT    +  N     P+ +                 
Sbjct: 703  PSNLVRPPLDHGYVPQVHGVHAIMGTGLQNVIPNVQSSMPVPSIVNASLSLPGVSMPPLQ 762

Query: 1494 YTSPISQ--------PSCGAPKPPVGGDYSNLFSSLVAQGVISLNQNPSKEDPVGLEFNP 1649
             + P+S         P    P PP GG  S LF+SL+AQG+ISL +    +D + L+FN 
Sbjct: 763  GSRPVSSTMIHITQNPGPVGPNPPAGGPLSGLFNSLMAQGLISLTKEAPMQDSMVLDFNQ 822

Query: 1650 DLLKVHHSSAITALFLDLPRQCTTCGLRFKLQEAHSRHMDWHVTKNRVTRNRKQKPSRKW 1829
            D LKV H SAI AL+ DLPRQCT CG+RFK QEAHS HMDWHV +NR ++N KQKPSR W
Sbjct: 823  DTLKVRHESAIKALYADLPRQCTACGVRFKCQEAHSSHMDWHVKRNRKSKN-KQKPSRNW 881

Query: 1830 FVSVNMWLTGAEALRTNSVPDFLPSENIVEKKDDEELAVPADDDQKYCALCGEPFDDFYC 2009
            FV V+MWL  AEAL T++VP FLP E+ VE+ DDEELAVPADDDQK+CALCGEPFDDFY 
Sbjct: 882  FVRVDMWLRNAEALGTDAVPSFLPIEDAVEQNDDEELAVPADDDQKFCALCGEPFDDFYS 941

Query: 2010 HETDEWMYKGAVYTNAPNGSTSCMDNSQLGHIVHAKCRSETGTVSEDMKKCD 2165
             ET+EWMY+GAVY NAP GST+ M+ SQLG I+H+KCRSET   S ++   D
Sbjct: 942  DETEEWMYRGAVYMNAPAGSTAGMNRSQLGPIIHSKCRSETSGASAEVLSKD 993



 Score =  105 bits (262), Expect = 1e-19
 Identities = 56/112 (50%), Positives = 69/112 (61%)
 Frame = +3

Query: 3   VFCEAYKQVHPSMHSAMHHLFGTWSTVFPLPLLQKIESDLQFSSSENRQSLGLPPLRASE 182
           VFCEAY QVHP+M+ +M HLF TWS+VF   +L+KIE+ L+FS   N Q   L   RASE
Sbjct: 154 VFCEAYNQVHPNMYPSMRHLFKTWSSVFHSSVLRKIEALLEFSPPMNDQPSSLTSGRASE 213

Query: 183 SLRPAHDRHINPKYLEVRRQFGHEITDSVNYVGRNFVHGHSKNHVRHPAAVR 338
           S RP H  H+NPKYLE RRQ GH   D+     R  +  H+ N      AV+
Sbjct: 214 SPRPTHGIHVNPKYLEARRQLGHATADAA-VTERLSLRDHTDNTASGLGAVK 264


>XP_008462986.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
            [Cucumis melo]
          Length = 1007

 Score =  400 bits (1027), Expect = e-122
 Identities = 263/665 (39%), Positives = 353/665 (53%), Gaps = 51/665 (7%)
 Frame = +3

Query: 309  NHVRHPAAVRFNNGVDIDRTRALIDAYGIDKRSETIKYPNDEEPT---------QNGIPT 461
            N + + ++    NG  ++  RALI+AYG DK      Y ND  P           N    
Sbjct: 367  NGLENTSSYNIRNGHALEGPRALIEAYGSDKGKG---YLNDNPPQAEHFSISGIDNKATP 423

Query: 462  MTWKNSEEEEFDWENMIPTLADHGRKDVFXXXXXXXXXFR--------NAAPSASHLRQD 617
            +TW+N+EEEEFDWE+M PTLAD GR +           FR        NA P    +R +
Sbjct: 424  VTWQNTEEEEFDWEDMSPTLADRGRNNDMLKPTVPPSRFRTRSGFERSNAMPIEPGMRSN 483

Query: 618  WPNQPQLPEVNSSSIV-DVPYSTAELKNTVYGILNGPTHLQSSSDPQVYWKLAQNVNHSS 794
            W +Q QLP ++SS ++ DV +ST ++                       WK+  +++ +S
Sbjct: 484  WSSQVQLPGIDSSIVIEDVVHSTPDI-----------------------WKMHNHISQTS 520

Query: 795  THQFSATKGGNNPRMPFGGSGILPPPVKPSSTGYSPEFITQN---QGQPFGSRRGSVSLE 965
             +  +    G N +MP  G GI     +  S  Y  + +T +   +     SR GS  L+
Sbjct: 521  QNLMNNKGPGRNFQMPMLGRGITSSGGEKMSP-YGDKLLTNDALHRPTNIASRLGSSGLD 579

Query: 966  YVKLEQRIAHEPASSGPWPPRHLHSSHAGPMSHTYQSNRQIRGQLDTLSG---------K 1118
                 Q I     S GP  P +L +S        +   R    Q ++L+G         +
Sbjct: 580  SNMESQSIVQ---SMGPRHPLNLSNSCPPSRPPVFPVPRHNTSQFESLNGSNSFMNSANR 636

Query: 1119 TLLVNQDVHSSSISDHNLGSTGSILQNPM-----LPSGQQFRPIPFNQSLVHTEILLPHS 1283
            T L  Q +++    + +L +    + N       L  G Q + +P          L P  
Sbjct: 637  TFLPEQQMNNLRNKELSLTTKSPQVGNQHTGHIPLTRGNQLQSMP----------LKPQF 686

Query: 1284 LP-QDMQHHLA----PPASVVGSSP-LSMSQLQRGYAPGHM------ASVG----TIDNN 1415
            LP QDMQ + +    PP      +P LS   + +G+ P +       A +G    ++ N+
Sbjct: 687  LPSQDMQDNFSGSAVPPVLPHLIAPSLSQGYISQGHRPANSEGLSSSAPIGQWNLSVHNS 746

Query: 1416 SFMQSPMSTXXXXXXXXXXXXXXXASYTSPISQPSCGAPKPPVGGDYSNLFSSLVAQGVI 1595
            S   +P+                 +  T PISQ     P    G   S L SSL+A+G+I
Sbjct: 747  S--SNPLHLQGGPLPPLPPGPHPTSGPTIPISQK---VPGQQPGTAISGLISSLMARGLI 801

Query: 1596 SLNQNPSKEDPVGLEFNPDLLKVHHSSAITALFLDLPRQCTTCGLRFKLQEAHSRHMDWH 1775
            SLN   S +D VGLEFNPD+LKV H SAITAL+ DLPRQC TCGLRFK QE HS HMDWH
Sbjct: 802  SLNNQASVQDSVGLEFNPDVLKVRHESAITALYADLPRQCMTCGLRFKTQEEHSNHMDWH 861

Query: 1776 VTKNRVTRNRKQKPSRKWFVSVNMWLTGAEALRTNSVPDFLPSENIVEKKDDEELAVPAD 1955
            VTKNR++++RKQKPSRKWFVS++MWL+GAEAL T +VP FLP+E +VEKKDDEELAVPAD
Sbjct: 862  VTKNRMSKSRKQKPSRKWFVSISMWLSGAEALGTEAVPGFLPAEVVVEKKDDEELAVPAD 921

Query: 1956 DDQKYCALCGEPFDDFYCHETDEWMYKGAVYTNAPNGSTSCMDNSQLGHIVHAKCRSETG 2135
            +DQK CALCGEPF+DFY  ET+EWMY+GAVY NAP+G T+ MD SQLG IVHAKCR+ET 
Sbjct: 922  EDQKTCALCGEPFEDFYSDETEEWMYRGAVYMNAPDGQTAGMDRSQLGPIVHAKCRTETN 981

Query: 2136 TVSED 2150
             V  +
Sbjct: 982  VVPSE 986



 Score =  100 bits (249), Expect = 5e-18
 Identities = 49/87 (56%), Positives = 62/87 (71%)
 Frame = +3

Query: 3   VFCEAYKQVHPSMHSAMHHLFGTWSTVFPLPLLQKIESDLQFSSSENRQSLGLPPLRASE 182
           VFCEAY+QVHP++H+AM HLFGTW+TVFP  +++KIE+  Q S    ++S GL   RASE
Sbjct: 160 VFCEAYRQVHPNLHNAMRHLFGTWATVFPPSIIRKIEA--QLSQLTAQESSGLTSSRASE 217

Query: 183 SLRPAHDRHINPKYLEVRRQFGHEITD 263
           S RP H  H+NPKYL   RQ  H + D
Sbjct: 218 SPRPTHGIHVNPKYL---RQLEHSVVD 241


>XP_008462960.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
            [Cucumis melo] XP_008462968.1 PREDICTED: polyadenylation
            and cleavage factor homolog 4 isoform X1 [Cucumis melo]
          Length = 1012

 Score =  400 bits (1027), Expect = e-122
 Identities = 263/665 (39%), Positives = 353/665 (53%), Gaps = 51/665 (7%)
 Frame = +3

Query: 309  NHVRHPAAVRFNNGVDIDRTRALIDAYGIDKRSETIKYPNDEEPT---------QNGIPT 461
            N + + ++    NG  ++  RALI+AYG DK      Y ND  P           N    
Sbjct: 372  NGLENTSSYNIRNGHALEGPRALIEAYGSDKGKG---YLNDNPPQAEHFSISGIDNKATP 428

Query: 462  MTWKNSEEEEFDWENMIPTLADHGRKDVFXXXXXXXXXFR--------NAAPSASHLRQD 617
            +TW+N+EEEEFDWE+M PTLAD GR +           FR        NA P    +R +
Sbjct: 429  VTWQNTEEEEFDWEDMSPTLADRGRNNDMLKPTVPPSRFRTRSGFERSNAMPIEPGMRSN 488

Query: 618  WPNQPQLPEVNSSSIV-DVPYSTAELKNTVYGILNGPTHLQSSSDPQVYWKLAQNVNHSS 794
            W +Q QLP ++SS ++ DV +ST ++                       WK+  +++ +S
Sbjct: 489  WSSQVQLPGIDSSIVIEDVVHSTPDI-----------------------WKMHNHISQTS 525

Query: 795  THQFSATKGGNNPRMPFGGSGILPPPVKPSSTGYSPEFITQN---QGQPFGSRRGSVSLE 965
             +  +    G N +MP  G GI     +  S  Y  + +T +   +     SR GS  L+
Sbjct: 526  QNLMNNKGPGRNFQMPMLGRGITSSGGEKMSP-YGDKLLTNDALHRPTNIASRLGSSGLD 584

Query: 966  YVKLEQRIAHEPASSGPWPPRHLHSSHAGPMSHTYQSNRQIRGQLDTLSG---------K 1118
                 Q I     S GP  P +L +S        +   R    Q ++L+G         +
Sbjct: 585  SNMESQSIVQ---SMGPRHPLNLSNSCPPSRPPVFPVPRHNTSQFESLNGSNSFMNSANR 641

Query: 1119 TLLVNQDVHSSSISDHNLGSTGSILQNPM-----LPSGQQFRPIPFNQSLVHTEILLPHS 1283
            T L  Q +++    + +L +    + N       L  G Q + +P          L P  
Sbjct: 642  TFLPEQQMNNLRNKELSLTTKSPQVGNQHTGHIPLTRGNQLQSMP----------LKPQF 691

Query: 1284 LP-QDMQHHLA----PPASVVGSSP-LSMSQLQRGYAPGHM------ASVG----TIDNN 1415
            LP QDMQ + +    PP      +P LS   + +G+ P +       A +G    ++ N+
Sbjct: 692  LPSQDMQDNFSGSAVPPVLPHLIAPSLSQGYISQGHRPANSEGLSSSAPIGQWNLSVHNS 751

Query: 1416 SFMQSPMSTXXXXXXXXXXXXXXXASYTSPISQPSCGAPKPPVGGDYSNLFSSLVAQGVI 1595
            S   +P+                 +  T PISQ     P    G   S L SSL+A+G+I
Sbjct: 752  S--SNPLHLQGGPLPPLPPGPHPTSGPTIPISQK---VPGQQPGTAISGLISSLMARGLI 806

Query: 1596 SLNQNPSKEDPVGLEFNPDLLKVHHSSAITALFLDLPRQCTTCGLRFKLQEAHSRHMDWH 1775
            SLN   S +D VGLEFNPD+LKV H SAITAL+ DLPRQC TCGLRFK QE HS HMDWH
Sbjct: 807  SLNNQASVQDSVGLEFNPDVLKVRHESAITALYADLPRQCMTCGLRFKTQEEHSNHMDWH 866

Query: 1776 VTKNRVTRNRKQKPSRKWFVSVNMWLTGAEALRTNSVPDFLPSENIVEKKDDEELAVPAD 1955
            VTKNR++++RKQKPSRKWFVS++MWL+GAEAL T +VP FLP+E +VEKKDDEELAVPAD
Sbjct: 867  VTKNRMSKSRKQKPSRKWFVSISMWLSGAEALGTEAVPGFLPAEVVVEKKDDEELAVPAD 926

Query: 1956 DDQKYCALCGEPFDDFYCHETDEWMYKGAVYTNAPNGSTSCMDNSQLGHIVHAKCRSETG 2135
            +DQK CALCGEPF+DFY  ET+EWMY+GAVY NAP+G T+ MD SQLG IVHAKCR+ET 
Sbjct: 927  EDQKTCALCGEPFEDFYSDETEEWMYRGAVYMNAPDGQTAGMDRSQLGPIVHAKCRTETN 986

Query: 2136 TVSED 2150
             V  +
Sbjct: 987  VVPSE 991



 Score =  100 bits (250), Expect = 4e-18
 Identities = 49/89 (55%), Positives = 63/89 (70%)
 Frame = +3

Query: 3   VFCEAYKQVHPSMHSAMHHLFGTWSTVFPLPLLQKIESDLQFSSSENRQSLGLPPLRASE 182
           VFCEAY+QVHP++H+AM HLFGTW+TVFP  +++KIE+  Q S    ++S GL   RASE
Sbjct: 160 VFCEAYRQVHPNLHNAMRHLFGTWATVFPPSIIRKIEA--QLSQLTAQESSGLTSSRASE 217

Query: 183 SLRPAHDRHINPKYLEVRRQFGHEITDSV 269
           S RP H  H+NPKYL   RQ  H + D +
Sbjct: 218 SPRPTHGIHVNPKYL---RQLEHSVVDKL 243


>XP_011037707.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X6 [Populus euphratica]
          Length = 886

 Score =  396 bits (1018), Expect = e-122
 Identities = 274/735 (37%), Positives = 371/735 (50%), Gaps = 51/735 (6%)
 Frame = +3

Query: 90   LPLLQKIESDLQFSSSENRQSLGLPPLRASESLRPAHDRHINPKYLEVRRQFGHEIT--- 260
            LPL    E  L  SS  +  ++G  P R  E L P+      P +      +GH  T   
Sbjct: 151  LPLTTGAERPL--SSEIDDLAVGNSPRRFVEGLSPSR-----PLF-----DYGHSRTIVR 198

Query: 261  -DSVNYVGRNFVHGHSKNHVRHPAAVRFNNGVDIDRTRALIDAYGID--KRSETIKYPND 431
             +  N + RN     + N     A  R +NG++    RALIDAYG D  KR  + K  + 
Sbjct: 199  DEEANELRRNNYSDDNHNRFEPSARYRLSNGLEHQGPRALIDAYGDDRGKRITSSKPLHI 258

Query: 432  EEPTQNG----IPTMTWKNSEEEEFDWENMIPTLADHGRKDVFXXXXXXXXXFRNAAP-- 593
            E+   NG    + + +W+N+EEEEFDWE+M PTL++HGR + F         F +  P  
Sbjct: 259  EQLAVNGMHNKVASRSWQNTEEEEFDWEDMSPTLSEHGRTNDFLPSSIPP--FGSVVPRP 316

Query: 594  -----SASHLRQDW-PNQPQLPEVNSSSIVDVPYSTAELKNTVYGILNGPT--------- 728
                 SA H   D   N+  L  + S   VD   + AE   ++ G   G T         
Sbjct: 317  AFGRLSAIHAESDIRSNRSSLAPMAS---VDGSSNIAEEAVSILGSGRGSTSKIPGFRTE 373

Query: 729  --HLQSSSDPQVYWKLAQNVNHSSTHQFSATKGGNNPRMPFGGSGILPPPVKPSSTG--- 893
               +  S   Q  W    ++ H S H  ++   G + +MP  GSG+       SS G   
Sbjct: 374  RNQILGSRHHQEAWNFPPHI-HQSAHLLNSKGRGRDFQMPLSGSGV-------SSLGGEN 425

Query: 894  YSP------EFITQNQGQPFGSRRGSVSLEYVKLEQRIAHEPASSGPWPPRHLHSSHAGP 1055
            YSP      +   Q    P  + R   +++        +  P SSG WPP +   S   P
Sbjct: 426  YSPLAEKLPDIDAQLNRSPAIASRWGSNIDSTSSGTWSSVVPPSSGVWPPVNARKSLPPP 485

Query: 1056 MSHTYQSNRQIRGQLDTLSGKTLLVNQDVHS-SSISDHNLGSTGSILQNPMLPSGQQFRP 1232
            +   +    Q R Q D ++  + ++NQ +   S++ +       +   N M P+    + 
Sbjct: 486  VHRIFPPPEQSRSQFDPINASSTVINQVLQKGSAMPEQPFNGFENKDYNSMKPTPMSNQH 545

Query: 1233 IPFNQ-SLVHTEILLPHSLPQDMQHHLAPPASVVGSSPLSMSQ-LQRGY-APGHMASVGT 1403
               NQ +  H     P  LP         P+ V    P  + Q L  GY   GH  ++  
Sbjct: 546  AALNQQNQAHVNPFQPQQLPSHETRENFHPSGVTSMPPRPLGQPLNHGYNTHGHSTAISM 605

Query: 1404 IDNNSF--MQSPM------STXXXXXXXXXXXXXXXASYTSPISQP-SCGAPKPPVGGDY 1556
            + +N+   +Q P+      +                   T P SQ  S   P  P G  +
Sbjct: 606  VPSNALPAVQLPLPVNNIPNMLHSQVGLRPPLPPGPPPQTMPFSQNVSSSVPGQPSGSAF 665

Query: 1557 SNLFSSLVAQGVISLNQNPSKEDPVGLEFNPDLLKVHHSSAITALFLDLPRQCTTCGLRF 1736
            S LF+SL+AQG+ISL +    +D VGLEFN DLLK+ + SAI+AL+ DLPRQCTTCGLRF
Sbjct: 666  SGLFNSLMAQGLISLTKQSPVQDSVGLEFNADLLKLRYESAISALYGDLPRQCTTCGLRF 725

Query: 1737 KLQEAHSRHMDWHVTKNRVTRNRKQKPSRKWFVSVNMWLTGAEALRTNSVPDFLPSENIV 1916
            K QE HS HMDWHVTKNR+++NRKQK SR WFVS +MWL+GAEAL T++ P FLP+E  V
Sbjct: 726  KCQEEHSTHMDWHVTKNRMSKNRKQKSSRNWFVSASMWLSGAEALGTDAAPGFLPTETTV 785

Query: 1917 EKKDDEELAVPADDDQKYCALCGEPFDDFYCHETDEWMYKGAVYTNAPNGSTSCMDNSQL 2096
            EKKDD  +AVPAD++Q  CALCGEPFDDFY  ET+EWMY+GAVY N+ NGST+ MD SQL
Sbjct: 786  EKKDDHGMAVPADEEQSTCALCGEPFDDFYSDETEEWMYRGAVYLNSSNGSTAGMDRSQL 845

Query: 2097 GHIVHAKCRSETGTV 2141
            G IVHAKCRS++  V
Sbjct: 846  GPIVHAKCRSDSSVV 860



 Score = 80.9 bits (198), Expect = 6e-12
 Identities = 48/117 (41%), Positives = 61/117 (52%)
 Frame = +3

Query: 51  MHHLFGTWSTVFPLPLLQKIESDLQFSSSENRQSLGLPPLRASESLRPAHDRHINPKYLE 230
           M HLFGTWS+VFP  +L KIE+ L FS   N QS  L   RASES RP H  H+NPKYL 
Sbjct: 1   MRHLFGTWSSVFPSSVLHKIETQLDFSPQVNNQSSSLTSFRASESPRPPHGIHVNPKYL- 59

Query: 231 VRRQFGHEITDSVNYVGRNFVHGHSKNHVRHPAAVRFNNGVDIDRTRALIDAYGIDK 401
             RQ  H   D+    G + +   +KN ++    V+   G    +      A G D+
Sbjct: 60  --RQLDHSTADN---TGWSILTSKAKNVIQSLQNVQHTKGTSNLKIYGKKPAVGYDE 111


>XP_006449074.1 hypothetical protein CICLE_v10014158mg [Citrus clementina] ESR62314.1
            hypothetical protein CICLE_v10014158mg [Citrus
            clementina]
          Length = 975

 Score =  398 bits (1023), Expect = e-121
 Identities = 269/673 (39%), Positives = 345/673 (51%), Gaps = 45/673 (6%)
 Frame = +3

Query: 276  VGRNFVHGHSKNHVRHPA---AVRFNNGVDIDRTRALIDAYGIDKRSETIKYPNDEEPTQ 446
            +GRN      +N  R  +   +   +NG +    RALIDAYG D+R+   K         
Sbjct: 309  IGRNEEVSEWRNPNRFESTSTSYNLSNGHEHQGPRALIDAYGSDRRASNNKPSQVGHMGI 368

Query: 447  NG----IPTMTWKNSEEEEFDWENMIPTLADHGRKDVFXXXXXXXXXFRNAAPSASHL-- 608
            NG    + + +W+N+EEEEFDWE+M PTL D GRK  F            A P  S L  
Sbjct: 369  NGMGNKVASRSWQNTEEEEFDWEDMSPTLLDRGRKFDFLPSSVPLYGSTGARPDFSKLNA 428

Query: 609  -------RQDWPNQPQLPEVNSSSIVDVP----YSTAELKNTVYGILNGPTHLQSSSDPQ 755
                   R +  +Q QLP ++ SS+          +      V G  + P     S  PQ
Sbjct: 429  SSLESDIRTNHSSQAQLPLLDDSSVTAEDSVSLLGSGRGTGKVSGFQSEPNQNLGSRYPQ 488

Query: 756  VYWKLAQNVNHSSTHQFSATKGGNNPRMPFGGSGILPPPVKPSSTGYSPEFITQN----Q 923
              W L    + SS H  +    G +  +PF GSG+ P      +  Y  +F+  +    +
Sbjct: 489  ESWNLPHPFSRSS-HPPNGRGRGRDSHIPFPGSGV-PSLGVDKAAPYIDKFVGADALFVR 546

Query: 924  GQPFGSRRGSVSLEYVKLEQRIAHEPASSGPWPPRHLHSSHAGPMSHTYQSNRQIRGQLD 1103
                 SR GS   + +          +S+G W P +LH  H  P    Y   +Q R Q D
Sbjct: 547  PPAVVSRIGSSGPDLLST----GAIQSSTGAWAPMNLHKPHLPPGQPVYPQQKQTRTQFD 602

Query: 1104 TLSGKTLLVNQDVHSSSISDHNLGSTGSILQNPMLPSGQQFRPIPFNQSLVH------TE 1265
            +++    ++NQ +  S    +N  S    L  P L   Q   P   NQ          T 
Sbjct: 603  SINAAGSILNQGLSKSL---YNSESKELSLMKPQLHD-QHATPNQQNQGRAQFLSQEATN 658

Query: 1266 ILLPHSLPQDMQHHLAPPASVVGSSPLSMSQLQRGYAPGHMASVGTIDNN---------- 1415
              LP S+   M  HL  P       PLS    QRG    H A +G + +N          
Sbjct: 659  KFLP-SIAASMPPHLLAP-------PLSHGYTQRG----HNAVMGMVPSNPVPAGQQPLH 706

Query: 1416 --SFMQSPMSTXXXXXXXXXXXXXXXASYTSPISQPSCG--APKPPVGGDYSNLFSSLVA 1583
              S   S +                 +S   P SQ S G   P    G  +S L SSL+A
Sbjct: 707  VQSIQNSSLHLQGRPSPPLPPGPPPASSQMIPGSQ-SAGLVVPSQQPGHAFSGLISSLMA 765

Query: 1584 QGVISLNQNPSKEDPVGLEFNPDLLKVHHSSAITALFLDLPRQCTTCGLRFKLQEAHSRH 1763
            QG+ISL      +D VGLEFN DL K+ H SAI++L+ +LPRQCTTCGLRFK QE HS H
Sbjct: 766  QGLISLTTQTPVQDSVGLEFNADLHKLRHESAISSLYANLPRQCTTCGLRFKCQEEHSSH 825

Query: 1764 MDWHVTKNRVTRNRKQKPSRKWFVSVNMWLTGAEALRTNSVPDFLPSENIVEKKDDEELA 1943
            MDWHVTKNR+++NRKQKPSRKWFVS +MWL+G EAL T+++P FLP+E I+EKKDDEE+A
Sbjct: 826  MDWHVTKNRMSKNRKQKPSRKWFVSASMWLSGTEALGTDAIPGFLPAEPILEKKDDEEMA 885

Query: 1944 VPADDDQKYCALCGEPFDDFYCHETDEWMYKGAVYTNAPNGSTSCMDNSQLGHIVHAKCR 2123
            VPAD+DQ  CALCGEPFDDFY  ET+EWMYKGAVY NAPNGST  MD SQLG IVHAKCR
Sbjct: 886  VPADEDQNVCALCGEPFDDFYSDETEEWMYKGAVYMNAPNGSTEGMDRSQLGPIVHAKCR 945

Query: 2124 SETGTV-SEDMKK 2159
            SE+  + S+D K+
Sbjct: 946  SESTVIPSDDFKR 958



 Score =  119 bits (298), Expect = 6e-24
 Identities = 58/89 (65%), Positives = 68/89 (76%)
 Frame = +3

Query: 3   VFCEAYKQVHPSMHSAMHHLFGTWSTVFPLPLLQKIESDLQFSSSENRQSLGLPPLRASE 182
           VFCEAY+QVHP ++SAM HLFGTWSTVFP  +L KIE++LQFSS  N+QS  +  LRASE
Sbjct: 150 VFCEAYRQVHPDLYSAMQHLFGTWSTVFPQAVLHKIEAELQFSSQVNKQSSNVNSLRASE 209

Query: 183 SLRPAHDRHINPKYLEVRRQFGHEITDSV 269
           S RP H  H+NPKY+   RQF H  TDSV
Sbjct: 210 SPRPTHGIHVNPKYI---RQFEHSNTDSV 235


>XP_002518518.1 PREDICTED: polyadenylation and cleavage factor homolog 4 [Ricinus
            communis] EEF43905.1 conserved hypothetical protein
            [Ricinus communis]
          Length = 1023

 Score =  397 bits (1021), Expect = e-121
 Identities = 271/665 (40%), Positives = 344/665 (51%), Gaps = 44/665 (6%)
 Frame = +3

Query: 294  HGHSKNHVRHPAAVRFN--NGVDIDRTRALIDAYGIDKRSETIKYPN---------DEEP 440
            H    NH +  A++ +N  NG +    RALIDAYG DKR    + PN         D + 
Sbjct: 367  HYSDDNHKKFEASIAYNLSNGHEHQGPRALIDAYGEDKRK---RIPNSKHLQIERLDVDG 423

Query: 441  TQNGIPTMTWKNSEEEEFDWENMIPTLADHGRKDVFXXXXXXXXXF--------RNAAPS 596
            T N +   +W+N+EEEEFDWE+M PTL D  R +                    R A+  
Sbjct: 424  TANKVGPRSWQNTEEEEFDWEDMSPTLIDRSRSNGLLLSVPPFGGAGARPGFGTRAASRL 483

Query: 597  ASHLRQDWPNQPQLPEVN-SSSIVDVPYSTAELKNTVYGILNG----PTHLQSSSDPQVY 761
             S LR     Q QLP V+ SS+I D   S         G L+G          S  P+  
Sbjct: 484  DSDLRSKQSGQAQLPLVDDSSNITDDTMSLLGPGRGSGGKLSGFQTDRNQTMGSRYPREA 543

Query: 762  WKLAQNVNHSSTHQFSATKGGNNP-RMPFGGSGILPP--PVKPSSTGYSPEFITQNQGQP 932
            WK   + + S+       KG N   +MPF GSGI      +  S     P+   Q    P
Sbjct: 544  WKSPHHFSQSA--DLINAKGRNRDLQMPFSGSGISSSGSEILASLVDQLPDADAQIIRPP 601

Query: 933  FGSRRGSVSLEYVKLEQRIAHEPASSGPWPPRHLHSSHAGPMSHTYQSNRQIRGQLDTLS 1112
                R S S              +S+G WP  ++H SH  P+   +    Q R  LD  +
Sbjct: 602  TLPSRMSSSTAL-----------SSTGVWPLVNVHKSHQPPLRPIFPPQMQSRSLLDPRN 650

Query: 1113 GKTLLVNQDVHSSS-ISDHNLGSTGS----ILQNPMLPSGQQFRPIPFNQSLVHTEILLP 1277
                 VNQ    SS +S+  L    S    + + P+LPS Q       NQ  V+      
Sbjct: 651  ASNTAVNQGFQKSSFLSEQQLNGLESKEHSLTKQPLLPS-QHAAMNQQNQGQVNPF---- 705

Query: 1278 HSLPQDMQHHLAPPASVVGSSPLSMSQLQRGYAPGHMASVGTIDNNSFMQSPMSTXXXXX 1457
                Q  + +  P  + +   PL+ +   R     H +++  I +N     P+       
Sbjct: 706  ----QPQRENFPPSVASLPPHPLAPTFDHRYVTQAHGSAMSRIHSNLVSSMPLPLPVNNI 761

Query: 1458 XXXXXXXXXX----------ASYTSPISQPSCG-APKPPVGGDYSNLFSSLVAQGVISLN 1604
                                AS+  PI Q +   A   P GG +S L +SLVAQG+ISL 
Sbjct: 762  PNTMHLQVGVRPPLPPGPPPASHMIPIPQNAGPVASNQPAGGAFSGLINSLVAQGLISLK 821

Query: 1605 QNPSKEDPVGLEFNPDLLKVHHSSAITALFLDLPRQCTTCGLRFKLQEAHSRHMDWHVTK 1784
            Q P  +D VGLEFN DLLKV H SAI+AL+ DLPRQCTTCGLRFK QE HS HMDWHVT+
Sbjct: 822  QTPV-QDSVGLEFNADLLKVRHESAISALYADLPRQCTTCGLRFKCQEDHSSHMDWHVTR 880

Query: 1785 NRVTRNRKQKPSRKWFVSVNMWLTGAEALRTNSVPDFLPSENIVEKKDDEELAVPADDDQ 1964
            NR+++NRKQKPSRKWFVS  MWL GAEAL T++VP FLP+E +VEKKDDEE+AVPAD++Q
Sbjct: 881  NRMSKNRKQKPSRKWFVSATMWLRGAEALGTDAVPGFLPTEAVVEKKDDEEMAVPADEEQ 940

Query: 1965 KYCALCGEPFDDFYCHETDEWMYKGAVYTNAPNGSTSCMDNSQLGHIVHAKCRSETGTV- 2141
              CALCGEPFDDFY  ET+EWMYKGAVY NAP+GST+ MD SQLG IVHAKCRSE+    
Sbjct: 941  NACALCGEPFDDFYSDETEEWMYKGAVYLNAPSGSTASMDRSQLGPIVHAKCRSESSVAP 1000

Query: 2142 SEDMK 2156
             ED++
Sbjct: 1001 PEDIR 1005



 Score = 96.7 bits (239), Expect = 8e-17
 Identities = 51/103 (49%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
 Frame = +3

Query: 3   VFCEAYKQVHPSMHSAMHHLFGTWSTVFPLPLLQKIESDLQFSS--SENRQSLGLPPLRA 176
           VFC AYKQVHP++H++M HLF TWSTVFP  +L KIES LQFSS  + N  S GL  L+A
Sbjct: 150 VFCAAYKQVHPNLHTSMRHLFRTWSTVFPPSVLSKIESQLQFSSQANNNNHSSGLSSLKA 209

Query: 177 SESLRPAHDRHINPKYLEVRRQFGHEITDSVNYVGRNF-VHGH 302
           S+S R  +  H+NPKY+ +           V        VHGH
Sbjct: 210 SDSPRTTNVIHVNPKYVRLEPSPSENSAQHVRGASSTLKVHGH 252


>XP_016683610.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X3 [Gossypium hirsutum]
          Length = 826

 Score =  391 bits (1005), Expect = e-120
 Identities = 267/648 (41%), Positives = 349/648 (53%), Gaps = 33/648 (5%)
 Frame = +3

Query: 336  RFNNGVDIDRTRALIDAYGIDK-----RSETIKYPN-DEEPTQNGIPTMTWKNSEEEEFD 497
            + +NG +    RALIDAYG D+      S+ ++    D     N +   +W+N+EEEEFD
Sbjct: 167  KLSNGNERQTLRALIDAYGNDRGQGMSNSKPVQVERLDVNGMGNKVTPRSWQNTEEEEFD 226

Query: 498  WENMIPTLADHGRKDVFXXXXXXXXXFRNAAPSASHL-RQDWPNQPQLPEVNSSSIVDVP 674
            WE+M PTLAD  R + F            A P+     R    NQ QL    SS+I   P
Sbjct: 227  WEDMSPTLADR-RSNEFSVSSVATFGSIGARPAGLESNRSSRSNQTQLALDESSTI---P 282

Query: 675  YSTAELKNTVYGILNGPTHLQSSSDPQVYWKLAQNVNHSSTHQFSATKGGNNPRMPFGGS 854
                   ++ +G+      +Q    PQ  W  +   + SS HQ  A   G +  MPF  S
Sbjct: 283  EDAVPSLSSGHGL----NQIQRPRYPQDAWSNSYPFSQSS-HQLHAKGRGRDFWMPFAAS 337

Query: 855  GILP-------PPVKPSSTGYSPEFITQNQGQPFGSRRGSVSLEYVKLEQRIAHEPASSG 1013
            GI         P ++    G S +F+      P   R GS SL+ V +  + A  P ++G
Sbjct: 338  GISSLGGDKNVPLIEKLPEGGS-QFVRPPALVP---RSGSSSLDTVTVVTQPAMLPLTAG 393

Query: 1014 PWPPRHLHSSHAGPMSHT-YQSNRQIRGQLDTLSGKTLLVNQDVHSSSISDHNLGSTGSI 1190
             WPP ++H S   P +HT Y   +  R   D+L+     +NQ  +          +  S 
Sbjct: 394  AWPPVNVHKSQP-PNAHTNYSLQQHGRSHFDSLNPINAAMNQGQNKHPYMPEQFDNFESK 452

Query: 1191 LQN----PMLPSGQQFRPIPFNQSLVHTEILLPHSLPQDMQHHLAPPASVVGSSPLSMSQ 1358
             Q+    P LP GQ  RP    ++ +H   L PH  P + +      A+      L    
Sbjct: 453  EQSLKTVPQLP-GQ--RPALQQRNSLHGS-LQPHFPPHEARDSFLSSATGPLPPRLLAPS 508

Query: 1359 LQRGYAPG-HMASVGTIDNN--SFMQSPMSTXXXXXXXXXXXXXXX---------ASYTS 1502
            +  GY+P  H AS+  + +N     Q P+S                         AS   
Sbjct: 509  MNHGYSPQMHGASISMVPSNLVPVAQPPLSIPNMPTGSLHLQGGAMPPLPPGPRPASQMM 568

Query: 1503 PISQPSCGA-PKPPVGGDYSNLFSSLVAQGVISLNQNPSKEDPVGLEFNPDLLKVHHSSA 1679
            P +Q +    P  P GG ++ L SSL+AQG+ISL +    +D VGLEF+ DLLKV H SA
Sbjct: 569  PAAQNAGPLLPNQPQGGPFTGLISSLMAQGLISLTKPTPIQDSVGLEFDADLLKVRHESA 628

Query: 1680 ITALFLDLPRQCTTCGLRFKLQEAHSRHMDWHVTKNRVTRNRKQKPSRKWFVSVNMWLTG 1859
            I+AL+ DLPRQCTTCGLRFK QE HS HMDWHVT+NR+++NRKQKPSRKWFVS +MWL+G
Sbjct: 629  ISALYADLPRQCTTCGLRFKFQEEHSTHMDWHVTRNRMSKNRKQKPSRKWFVSASMWLSG 688

Query: 1860 AEALRTNSVPDFLPSENIVEKKDDEELAVPADDDQKYCALCGEPFDDFYCHETDEWMYKG 2039
            AEAL T++VP FLP+E+IVEKKDDEELAV AD+DQ  CALCGEPFDDFY  ET+EWMY+G
Sbjct: 689  AEALGTDAVPGFLPTEDIVEKKDDEELAVSADEDQNLCALCGEPFDDFYSDETEEWMYRG 748

Query: 2040 AVYTNAPNGSTSCMDNSQLGHIVHAKCRSETGTV-SEDMKKCDLVSCF 2180
            AVY NAP+GS   +D SQLG IVHAKCRSE+  V  ED  + D V  F
Sbjct: 749  AVYMNAPSGSVEGIDRSQLGPIVHAKCRSESSVVPPEDFVRYDGVCIF 796


>XP_011037706.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X5 [Populus euphratica]
          Length = 1035

 Score =  396 bits (1018), Expect = e-120
 Identities = 274/735 (37%), Positives = 371/735 (50%), Gaps = 51/735 (6%)
 Frame = +3

Query: 90   LPLLQKIESDLQFSSSENRQSLGLPPLRASESLRPAHDRHINPKYLEVRRQFGHEIT--- 260
            LPL    E  L  SS  +  ++G  P R  E L P+      P +      +GH  T   
Sbjct: 300  LPLTTGAERPL--SSEIDDLAVGNSPRRFVEGLSPSR-----PLF-----DYGHSRTIVR 347

Query: 261  -DSVNYVGRNFVHGHSKNHVRHPAAVRFNNGVDIDRTRALIDAYGID--KRSETIKYPND 431
             +  N + RN     + N     A  R +NG++    RALIDAYG D  KR  + K  + 
Sbjct: 348  DEEANELRRNNYSDDNHNRFEPSARYRLSNGLEHQGPRALIDAYGDDRGKRITSSKPLHI 407

Query: 432  EEPTQNG----IPTMTWKNSEEEEFDWENMIPTLADHGRKDVFXXXXXXXXXFRNAAP-- 593
            E+   NG    + + +W+N+EEEEFDWE+M PTL++HGR + F         F +  P  
Sbjct: 408  EQLAVNGMHNKVASRSWQNTEEEEFDWEDMSPTLSEHGRTNDFLPSSIPP--FGSVVPRP 465

Query: 594  -----SASHLRQDW-PNQPQLPEVNSSSIVDVPYSTAELKNTVYGILNGPT--------- 728
                 SA H   D   N+  L  + S   VD   + AE   ++ G   G T         
Sbjct: 466  AFGRLSAIHAESDIRSNRSSLAPMAS---VDGSSNIAEEAVSILGSGRGSTSKIPGFRTE 522

Query: 729  --HLQSSSDPQVYWKLAQNVNHSSTHQFSATKGGNNPRMPFGGSGILPPPVKPSSTG--- 893
               +  S   Q  W    ++ H S H  ++   G + +MP  GSG+       SS G   
Sbjct: 523  RNQILGSRHHQEAWNFPPHI-HQSAHLLNSKGRGRDFQMPLSGSGV-------SSLGGEN 574

Query: 894  YSP------EFITQNQGQPFGSRRGSVSLEYVKLEQRIAHEPASSGPWPPRHLHSSHAGP 1055
            YSP      +   Q    P  + R   +++        +  P SSG WPP +   S   P
Sbjct: 575  YSPLAEKLPDIDAQLNRSPAIASRWGSNIDSTSSGTWSSVVPPSSGVWPPVNARKSLPPP 634

Query: 1056 MSHTYQSNRQIRGQLDTLSGKTLLVNQDVHS-SSISDHNLGSTGSILQNPMLPSGQQFRP 1232
            +   +    Q R Q D ++  + ++NQ +   S++ +       +   N M P+    + 
Sbjct: 635  VHRIFPPPEQSRSQFDPINASSTVINQVLQKGSAMPEQPFNGFENKDYNSMKPTPMSNQH 694

Query: 1233 IPFNQ-SLVHTEILLPHSLPQDMQHHLAPPASVVGSSPLSMSQ-LQRGY-APGHMASVGT 1403
               NQ +  H     P  LP         P+ V    P  + Q L  GY   GH  ++  
Sbjct: 695  AALNQQNQAHVNPFQPQQLPSHETRENFHPSGVTSMPPRPLGQPLNHGYNTHGHSTAISM 754

Query: 1404 IDNNSF--MQSPM------STXXXXXXXXXXXXXXXASYTSPISQP-SCGAPKPPVGGDY 1556
            + +N+   +Q P+      +                   T P SQ  S   P  P G  +
Sbjct: 755  VPSNALPAVQLPLPVNNIPNMLHSQVGLRPPLPPGPPPQTMPFSQNVSSSVPGQPSGSAF 814

Query: 1557 SNLFSSLVAQGVISLNQNPSKEDPVGLEFNPDLLKVHHSSAITALFLDLPRQCTTCGLRF 1736
            S LF+SL+AQG+ISL +    +D VGLEFN DLLK+ + SAI+AL+ DLPRQCTTCGLRF
Sbjct: 815  SGLFNSLMAQGLISLTKQSPVQDSVGLEFNADLLKLRYESAISALYGDLPRQCTTCGLRF 874

Query: 1737 KLQEAHSRHMDWHVTKNRVTRNRKQKPSRKWFVSVNMWLTGAEALRTNSVPDFLPSENIV 1916
            K QE HS HMDWHVTKNR+++NRKQK SR WFVS +MWL+GAEAL T++ P FLP+E  V
Sbjct: 875  KCQEEHSTHMDWHVTKNRMSKNRKQKSSRNWFVSASMWLSGAEALGTDAAPGFLPTETTV 934

Query: 1917 EKKDDEELAVPADDDQKYCALCGEPFDDFYCHETDEWMYKGAVYTNAPNGSTSCMDNSQL 2096
            EKKDD  +AVPAD++Q  CALCGEPFDDFY  ET+EWMY+GAVY N+ NGST+ MD SQL
Sbjct: 935  EKKDDHGMAVPADEEQSTCALCGEPFDDFYSDETEEWMYRGAVYLNSSNGSTAGMDRSQL 994

Query: 2097 GHIVHAKCRSETGTV 2141
            G IVHAKCRS++  V
Sbjct: 995  GPIVHAKCRSDSSVV 1009



 Score =  102 bits (253), Expect = 2e-18
 Identities = 50/88 (56%), Positives = 59/88 (67%)
 Frame = +3

Query: 3   VFCEAYKQVHPSMHSAMHHLFGTWSTVFPLPLLQKIESDLQFSSSENRQSLGLPPLRASE 182
           VFCEAY+QV PS++ +M HLFGTWS+VFP  +L KIE+ L FS   N QS  L   RASE
Sbjct: 152 VFCEAYRQVDPSLYPSMRHLFGTWSSVFPSSVLHKIETQLDFSPQVNNQSSSLTSFRASE 211

Query: 183 SLRPAHDRHINPKYLEVRRQFGHEITDS 266
           S RP H  H+NPKYL   RQ  H   D+
Sbjct: 212 SPRPPHGIHVNPKYL---RQLDHSTADN 236


>XP_011037705.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X4 [Populus euphratica]
          Length = 1051

 Score =  396 bits (1018), Expect = e-120
 Identities = 274/735 (37%), Positives = 371/735 (50%), Gaps = 51/735 (6%)
 Frame = +3

Query: 90   LPLLQKIESDLQFSSSENRQSLGLPPLRASESLRPAHDRHINPKYLEVRRQFGHEIT--- 260
            LPL    E  L  SS  +  ++G  P R  E L P+      P +      +GH  T   
Sbjct: 318  LPLTTGAERPL--SSEIDDLAVGNSPRRFVEGLSPSR-----PLF-----DYGHSRTIVR 365

Query: 261  -DSVNYVGRNFVHGHSKNHVRHPAAVRFNNGVDIDRTRALIDAYGID--KRSETIKYPND 431
             +  N + RN     + N     A  R +NG++    RALIDAYG D  KR  + K  + 
Sbjct: 366  DEEANELRRNNYSDDNHNRFEPSARYRLSNGLEHQGPRALIDAYGDDRGKRITSSKPLHI 425

Query: 432  EEPTQNG----IPTMTWKNSEEEEFDWENMIPTLADHGRKDVFXXXXXXXXXFRNAAP-- 593
            E+   NG    + + +W+N+EEEEFDWE+M PTL++HGR + F         F +  P  
Sbjct: 426  EQLAVNGMHNKVASRSWQNTEEEEFDWEDMSPTLSEHGRTNDFLPSSIPP--FGSVVPRP 483

Query: 594  -----SASHLRQDW-PNQPQLPEVNSSSIVDVPYSTAELKNTVYGILNGPT--------- 728
                 SA H   D   N+  L  + S   VD   + AE   ++ G   G T         
Sbjct: 484  AFGRLSAIHAESDIRSNRSSLAPMAS---VDGSSNIAEEAVSILGSGRGSTSKIPGFRTE 540

Query: 729  --HLQSSSDPQVYWKLAQNVNHSSTHQFSATKGGNNPRMPFGGSGILPPPVKPSSTG--- 893
               +  S   Q  W    ++ H S H  ++   G + +MP  GSG+       SS G   
Sbjct: 541  RNQILGSRHHQEAWNFPPHI-HQSAHLLNSKGRGRDFQMPLSGSGV-------SSLGGEN 592

Query: 894  YSP------EFITQNQGQPFGSRRGSVSLEYVKLEQRIAHEPASSGPWPPRHLHSSHAGP 1055
            YSP      +   Q    P  + R   +++        +  P SSG WPP +   S   P
Sbjct: 593  YSPLAEKLPDIDAQLNRSPAIASRWGSNIDSTSSGTWSSVVPPSSGVWPPVNARKSLPPP 652

Query: 1056 MSHTYQSNRQIRGQLDTLSGKTLLVNQDVHS-SSISDHNLGSTGSILQNPMLPSGQQFRP 1232
            +   +    Q R Q D ++  + ++NQ +   S++ +       +   N M P+    + 
Sbjct: 653  VHRIFPPPEQSRSQFDPINASSTVINQVLQKGSAMPEQPFNGFENKDYNSMKPTPMSNQH 712

Query: 1233 IPFNQ-SLVHTEILLPHSLPQDMQHHLAPPASVVGSSPLSMSQ-LQRGY-APGHMASVGT 1403
               NQ +  H     P  LP         P+ V    P  + Q L  GY   GH  ++  
Sbjct: 713  AALNQQNQAHVNPFQPQQLPSHETRENFHPSGVTSMPPRPLGQPLNHGYNTHGHSTAISM 772

Query: 1404 IDNNSF--MQSPM------STXXXXXXXXXXXXXXXASYTSPISQP-SCGAPKPPVGGDY 1556
            + +N+   +Q P+      +                   T P SQ  S   P  P G  +
Sbjct: 773  VPSNALPAVQLPLPVNNIPNMLHSQVGLRPPLPPGPPPQTMPFSQNVSSSVPGQPSGSAF 832

Query: 1557 SNLFSSLVAQGVISLNQNPSKEDPVGLEFNPDLLKVHHSSAITALFLDLPRQCTTCGLRF 1736
            S LF+SL+AQG+ISL +    +D VGLEFN DLLK+ + SAI+AL+ DLPRQCTTCGLRF
Sbjct: 833  SGLFNSLMAQGLISLTKQSPVQDSVGLEFNADLLKLRYESAISALYGDLPRQCTTCGLRF 892

Query: 1737 KLQEAHSRHMDWHVTKNRVTRNRKQKPSRKWFVSVNMWLTGAEALRTNSVPDFLPSENIV 1916
            K QE HS HMDWHVTKNR+++NRKQK SR WFVS +MWL+GAEAL T++ P FLP+E  V
Sbjct: 893  KCQEEHSTHMDWHVTKNRMSKNRKQKSSRNWFVSASMWLSGAEALGTDAAPGFLPTETTV 952

Query: 1917 EKKDDEELAVPADDDQKYCALCGEPFDDFYCHETDEWMYKGAVYTNAPNGSTSCMDNSQL 2096
            EKKDD  +AVPAD++Q  CALCGEPFDDFY  ET+EWMY+GAVY N+ NGST+ MD SQL
Sbjct: 953  EKKDDHGMAVPADEEQSTCALCGEPFDDFYSDETEEWMYRGAVYLNSSNGSTAGMDRSQL 1012

Query: 2097 GHIVHAKCRSETGTV 2141
            G IVHAKCRS++  V
Sbjct: 1013 GPIVHAKCRSDSSVV 1027



 Score =  103 bits (258), Expect = 4e-19
 Identities = 58/133 (43%), Positives = 75/133 (56%)
 Frame = +3

Query: 3   VFCEAYKQVHPSMHSAMHHLFGTWSTVFPLPLLQKIESDLQFSSSENRQSLGLPPLRASE 182
           VFCEAY+QV PS++ +M HLFGTWS+VFP  +L KIE+ L FS   N QS  L   RASE
Sbjct: 152 VFCEAYRQVDPSLYPSMRHLFGTWSSVFPSSVLHKIETQLDFSPQVNNQSSSLTSFRASE 211

Query: 183 SLRPAHDRHINPKYLEVRRQFGHEITDSVNYVGRNFVHGHSKNHVRHPAAVRFNNGVDID 362
           S RP H  H+NPKYL   RQ  H   D+    G + +   +KN ++    V+   G    
Sbjct: 212 SPRPPHGIHVNPKYL---RQLDHSTADN---TGWSILTSKAKNVIQSLQNVQHTKGTSNL 265

Query: 363 RTRALIDAYGIDK 401
           +      A G D+
Sbjct: 266 KIYGKKPAVGYDE 278


>XP_011037702.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X1 [Populus euphratica] XP_011037703.1 PREDICTED:
            polyadenylation and cleavage factor homolog 4-like
            isoform X2 [Populus euphratica] XP_011037704.1 PREDICTED:
            polyadenylation and cleavage factor homolog 4-like
            isoform X3 [Populus euphratica]
          Length = 1053

 Score =  396 bits (1018), Expect = e-120
 Identities = 274/735 (37%), Positives = 371/735 (50%), Gaps = 51/735 (6%)
 Frame = +3

Query: 90   LPLLQKIESDLQFSSSENRQSLGLPPLRASESLRPAHDRHINPKYLEVRRQFGHEIT--- 260
            LPL    E  L  SS  +  ++G  P R  E L P+      P +      +GH  T   
Sbjct: 318  LPLTTGAERPL--SSEIDDLAVGNSPRRFVEGLSPSR-----PLF-----DYGHSRTIVR 365

Query: 261  -DSVNYVGRNFVHGHSKNHVRHPAAVRFNNGVDIDRTRALIDAYGID--KRSETIKYPND 431
             +  N + RN     + N     A  R +NG++    RALIDAYG D  KR  + K  + 
Sbjct: 366  DEEANELRRNNYSDDNHNRFEPSARYRLSNGLEHQGPRALIDAYGDDRGKRITSSKPLHI 425

Query: 432  EEPTQNG----IPTMTWKNSEEEEFDWENMIPTLADHGRKDVFXXXXXXXXXFRNAAP-- 593
            E+   NG    + + +W+N+EEEEFDWE+M PTL++HGR + F         F +  P  
Sbjct: 426  EQLAVNGMHNKVASRSWQNTEEEEFDWEDMSPTLSEHGRTNDFLPSSIPP--FGSVVPRP 483

Query: 594  -----SASHLRQDW-PNQPQLPEVNSSSIVDVPYSTAELKNTVYGILNGPT--------- 728
                 SA H   D   N+  L  + S   VD   + AE   ++ G   G T         
Sbjct: 484  AFGRLSAIHAESDIRSNRSSLAPMAS---VDGSSNIAEEAVSILGSGRGSTSKIPGFRTE 540

Query: 729  --HLQSSSDPQVYWKLAQNVNHSSTHQFSATKGGNNPRMPFGGSGILPPPVKPSSTG--- 893
               +  S   Q  W    ++ H S H  ++   G + +MP  GSG+       SS G   
Sbjct: 541  RNQILGSRHHQEAWNFPPHI-HQSAHLLNSKGRGRDFQMPLSGSGV-------SSLGGEN 592

Query: 894  YSP------EFITQNQGQPFGSRRGSVSLEYVKLEQRIAHEPASSGPWPPRHLHSSHAGP 1055
            YSP      +   Q    P  + R   +++        +  P SSG WPP +   S   P
Sbjct: 593  YSPLAEKLPDIDAQLNRSPAIASRWGSNIDSTSSGTWSSVVPPSSGVWPPVNARKSLPPP 652

Query: 1056 MSHTYQSNRQIRGQLDTLSGKTLLVNQDVHS-SSISDHNLGSTGSILQNPMLPSGQQFRP 1232
            +   +    Q R Q D ++  + ++NQ +   S++ +       +   N M P+    + 
Sbjct: 653  VHRIFPPPEQSRSQFDPINASSTVINQVLQKGSAMPEQPFNGFENKDYNSMKPTPMSNQH 712

Query: 1233 IPFNQ-SLVHTEILLPHSLPQDMQHHLAPPASVVGSSPLSMSQ-LQRGY-APGHMASVGT 1403
               NQ +  H     P  LP         P+ V    P  + Q L  GY   GH  ++  
Sbjct: 713  AALNQQNQAHVNPFQPQQLPSHETRENFHPSGVTSMPPRPLGQPLNHGYNTHGHSTAISM 772

Query: 1404 IDNNSF--MQSPM------STXXXXXXXXXXXXXXXASYTSPISQP-SCGAPKPPVGGDY 1556
            + +N+   +Q P+      +                   T P SQ  S   P  P G  +
Sbjct: 773  VPSNALPAVQLPLPVNNIPNMLHSQVGLRPPLPPGPPPQTMPFSQNVSSSVPGQPSGSAF 832

Query: 1557 SNLFSSLVAQGVISLNQNPSKEDPVGLEFNPDLLKVHHSSAITALFLDLPRQCTTCGLRF 1736
            S LF+SL+AQG+ISL +    +D VGLEFN DLLK+ + SAI+AL+ DLPRQCTTCGLRF
Sbjct: 833  SGLFNSLMAQGLISLTKQSPVQDSVGLEFNADLLKLRYESAISALYGDLPRQCTTCGLRF 892

Query: 1737 KLQEAHSRHMDWHVTKNRVTRNRKQKPSRKWFVSVNMWLTGAEALRTNSVPDFLPSENIV 1916
            K QE HS HMDWHVTKNR+++NRKQK SR WFVS +MWL+GAEAL T++ P FLP+E  V
Sbjct: 893  KCQEEHSTHMDWHVTKNRMSKNRKQKSSRNWFVSASMWLSGAEALGTDAAPGFLPTETTV 952

Query: 1917 EKKDDEELAVPADDDQKYCALCGEPFDDFYCHETDEWMYKGAVYTNAPNGSTSCMDNSQL 2096
            EKKDD  +AVPAD++Q  CALCGEPFDDFY  ET+EWMY+GAVY N+ NGST+ MD SQL
Sbjct: 953  EKKDDHGMAVPADEEQSTCALCGEPFDDFYSDETEEWMYRGAVYLNSSNGSTAGMDRSQL 1012

Query: 2097 GHIVHAKCRSETGTV 2141
            G IVHAKCRS++  V
Sbjct: 1013 GPIVHAKCRSDSSVV 1027



 Score =  103 bits (258), Expect = 4e-19
 Identities = 58/133 (43%), Positives = 75/133 (56%)
 Frame = +3

Query: 3   VFCEAYKQVHPSMHSAMHHLFGTWSTVFPLPLLQKIESDLQFSSSENRQSLGLPPLRASE 182
           VFCEAY+QV PS++ +M HLFGTWS+VFP  +L KIE+ L FS   N QS  L   RASE
Sbjct: 152 VFCEAYRQVDPSLYPSMRHLFGTWSSVFPSSVLHKIETQLDFSPQVNNQSSSLTSFRASE 211

Query: 183 SLRPAHDRHINPKYLEVRRQFGHEITDSVNYVGRNFVHGHSKNHVRHPAAVRFNNGVDID 362
           S RP H  H+NPKYL   RQ  H   D+    G + +   +KN ++    V+   G    
Sbjct: 212 SPRPPHGIHVNPKYL---RQLDHSTADN---TGWSILTSKAKNVIQSLQNVQHTKGTSNL 265

Query: 363 RTRALIDAYGIDK 401
           +      A G D+
Sbjct: 266 KIYGKKPAVGYDE 278


>XP_016753659.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X4 [Gossypium hirsutum]
          Length = 858

 Score =  389 bits (998), Expect = e-119
 Identities = 266/650 (40%), Positives = 349/650 (53%), Gaps = 33/650 (5%)
 Frame = +3

Query: 330  AVRFNNGVDIDRTRALIDAYGIDK-----RSETIKYPN-DEEPTQNGIPTMTWKNSEEEE 491
            A + +NG +    RALIDAYG D+      S+ ++    D     N +   +W+N+EEEE
Sbjct: 197  AYKLSNGNERQTLRALIDAYGNDRGQGMSNSKPVQVERLDVNGMGNKVTPRSWQNTEEEE 256

Query: 492  FDWENMIPTLADHGRKDVFXXXXXXXXXFRNAAPSASHL-RQDWPNQPQLPEVNSSSIVD 668
            FDWE+M PTLAD  R + F            A P+     R    NQ QL    SS+I  
Sbjct: 257  FDWEDMSPTLADR-RSNEFSVSSVSTFGSIGARPAGLESNRSSRSNQTQLALDESSTI-- 313

Query: 669  VPYSTAELKNTVYGILNGPTHLQSSSDPQVYWKLAQNVNHSSTHQFSATKGGNNPRMPFG 848
             P  T    ++ +G+      +Q    PQ  W  +   + SS HQ  A   G + R PF 
Sbjct: 314  -PEDTVPSLSSGHGL----NQIQRPRYPQDAWSNSYPFSQSS-HQLHAKGRGRDFRTPFS 367

Query: 849  GSGILP-------PPVKPSSTGYSPEFITQNQGQPFGSRRGSVSLEYVKLEQRIAHEPAS 1007
             SGI         P ++    G S +F+      P   R GS SL+ V +  + A  P +
Sbjct: 368  ASGISSLGGDKNVPLIEKLPEGGS-QFVRPPALVP---RSGSSSLDTVTVGAQPAMLPLT 423

Query: 1008 SGPWPPRHLHSSHAGPMSHT-YQSNRQIRGQLDTLSGKTLLVNQDVHSSSISDHNLGSTG 1184
            +G WPP ++  S   P +HT Y   +  R   D+L+     +NQ  +          +  
Sbjct: 424  AGAWPPVNVLKSQP-PTAHTNYSLQQHGRSHFDSLNPINAAMNQGQNKHPYMPEQFDNFE 482

Query: 1185 SILQN----PMLPSGQQFRPIPFNQSLVHTEILLPHSLPQDMQHHLAPPASVVGSSPLSM 1352
            S  Q+    P LP GQ  RP    ++ +H  + L H  P + +      A+      L  
Sbjct: 483  SKEQSLTTVPQLP-GQ--RPALRQRNSLHGSLQL-HFTPHEARDSFLSSATGPLPPRLLA 538

Query: 1353 SQLQRGYAPG-HMASVGTIDNNSF--MQSPMSTXXXXXXXXXXXXXXX---------ASY 1496
              +  GY+P  H A +  + +N     Q P+S                         AS 
Sbjct: 539  PSMNHGYSPQMHGAGISMVPSNPVPVAQPPLSIPNMPTGSLHLQGGAIPPLPSGPRPASQ 598

Query: 1497 TSPISQPSCGA-PKPPVGGDYSNLFSSLVAQGVISLNQNPSKEDPVGLEFNPDLLKVHHS 1673
              P +Q +    P  P GG ++ L SSL+AQG+ISL +    +D VGLEF+ DLLKV H 
Sbjct: 599  MMPATQNAGPLLPNQPQGGPFTGLISSLMAQGLISLTKPTPIQDSVGLEFDADLLKVRHE 658

Query: 1674 SAITALFLDLPRQCTTCGLRFKLQEAHSRHMDWHVTKNRVTRNRKQKPSRKWFVSVNMWL 1853
            SAI+AL+ DLPRQCTTCGLRFK QE HS HMDWHVT+NR+++NRKQKPSRKWFVS +MWL
Sbjct: 659  SAISALYADLPRQCTTCGLRFKFQEEHSTHMDWHVTRNRMSKNRKQKPSRKWFVSASMWL 718

Query: 1854 TGAEALRTNSVPDFLPSENIVEKKDDEELAVPADDDQKYCALCGEPFDDFYCHETDEWMY 2033
            +GAEAL T++VP FLP+E+IVEKKDDEELAV AD+DQ  CALCGEPFDDFY  ET+EWMY
Sbjct: 719  SGAEALGTDAVPGFLPTEDIVEKKDDEELAVSADEDQNLCALCGEPFDDFYSDETEEWMY 778

Query: 2034 KGAVYTNAPNGSTSCMDNSQLGHIVHAKCRSETGTV-SEDMKKCDLVSCF 2180
            +GAVY NAP+GS   +D SQLG IVHAKCRSE+  V  ED  + D V  F
Sbjct: 779  RGAVYMNAPSGSVEGIDRSQLGPIVHAKCRSESSVVPPEDFVRYDGVCIF 828


>XP_016683608.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X1 [Gossypium hirsutum]
          Length = 1024

 Score =  391 bits (1005), Expect = e-118
 Identities = 267/648 (41%), Positives = 349/648 (53%), Gaps = 33/648 (5%)
 Frame = +3

Query: 336  RFNNGVDIDRTRALIDAYGIDK-----RSETIKYPN-DEEPTQNGIPTMTWKNSEEEEFD 497
            + +NG +    RALIDAYG D+      S+ ++    D     N +   +W+N+EEEEFD
Sbjct: 365  KLSNGNERQTLRALIDAYGNDRGQGMSNSKPVQVERLDVNGMGNKVTPRSWQNTEEEEFD 424

Query: 498  WENMIPTLADHGRKDVFXXXXXXXXXFRNAAPSASHL-RQDWPNQPQLPEVNSSSIVDVP 674
            WE+M PTLAD  R + F            A P+     R    NQ QL    SS+I   P
Sbjct: 425  WEDMSPTLADR-RSNEFSVSSVATFGSIGARPAGLESNRSSRSNQTQLALDESSTI---P 480

Query: 675  YSTAELKNTVYGILNGPTHLQSSSDPQVYWKLAQNVNHSSTHQFSATKGGNNPRMPFGGS 854
                   ++ +G+      +Q    PQ  W  +   + SS HQ  A   G +  MPF  S
Sbjct: 481  EDAVPSLSSGHGL----NQIQRPRYPQDAWSNSYPFSQSS-HQLHAKGRGRDFWMPFAAS 535

Query: 855  GILP-------PPVKPSSTGYSPEFITQNQGQPFGSRRGSVSLEYVKLEQRIAHEPASSG 1013
            GI         P ++    G S +F+      P   R GS SL+ V +  + A  P ++G
Sbjct: 536  GISSLGGDKNVPLIEKLPEGGS-QFVRPPALVP---RSGSSSLDTVTVVTQPAMLPLTAG 591

Query: 1014 PWPPRHLHSSHAGPMSHT-YQSNRQIRGQLDTLSGKTLLVNQDVHSSSISDHNLGSTGSI 1190
             WPP ++H S   P +HT Y   +  R   D+L+     +NQ  +          +  S 
Sbjct: 592  AWPPVNVHKSQP-PNAHTNYSLQQHGRSHFDSLNPINAAMNQGQNKHPYMPEQFDNFESK 650

Query: 1191 LQN----PMLPSGQQFRPIPFNQSLVHTEILLPHSLPQDMQHHLAPPASVVGSSPLSMSQ 1358
             Q+    P LP GQ  RP    ++ +H   L PH  P + +      A+      L    
Sbjct: 651  EQSLKTVPQLP-GQ--RPALQQRNSLHGS-LQPHFPPHEARDSFLSSATGPLPPRLLAPS 706

Query: 1359 LQRGYAPG-HMASVGTIDNN--SFMQSPMSTXXXXXXXXXXXXXXX---------ASYTS 1502
            +  GY+P  H AS+  + +N     Q P+S                         AS   
Sbjct: 707  MNHGYSPQMHGASISMVPSNLVPVAQPPLSIPNMPTGSLHLQGGAMPPLPPGPRPASQMM 766

Query: 1503 PISQPSCGA-PKPPVGGDYSNLFSSLVAQGVISLNQNPSKEDPVGLEFNPDLLKVHHSSA 1679
            P +Q +    P  P GG ++ L SSL+AQG+ISL +    +D VGLEF+ DLLKV H SA
Sbjct: 767  PAAQNAGPLLPNQPQGGPFTGLISSLMAQGLISLTKPTPIQDSVGLEFDADLLKVRHESA 826

Query: 1680 ITALFLDLPRQCTTCGLRFKLQEAHSRHMDWHVTKNRVTRNRKQKPSRKWFVSVNMWLTG 1859
            I+AL+ DLPRQCTTCGLRFK QE HS HMDWHVT+NR+++NRKQKPSRKWFVS +MWL+G
Sbjct: 827  ISALYADLPRQCTTCGLRFKFQEEHSTHMDWHVTRNRMSKNRKQKPSRKWFVSASMWLSG 886

Query: 1860 AEALRTNSVPDFLPSENIVEKKDDEELAVPADDDQKYCALCGEPFDDFYCHETDEWMYKG 2039
            AEAL T++VP FLP+E+IVEKKDDEELAV AD+DQ  CALCGEPFDDFY  ET+EWMY+G
Sbjct: 887  AEALGTDAVPGFLPTEDIVEKKDDEELAVSADEDQNLCALCGEPFDDFYSDETEEWMYRG 946

Query: 2040 AVYTNAPNGSTSCMDNSQLGHIVHAKCRSETGTV-SEDMKKCDLVSCF 2180
            AVY NAP+GS   +D SQLG IVHAKCRSE+  V  ED  + D V  F
Sbjct: 947  AVYMNAPSGSVEGIDRSQLGPIVHAKCRSESSVVPPEDFVRYDGVCIF 994



 Score =  108 bits (269), Expect = 2e-20
 Identities = 63/138 (45%), Positives = 79/138 (57%), Gaps = 1/138 (0%)
 Frame = +3

Query: 3   VFCEAYKQVHPSMHSAMHHLFGTWSTVFPLPLLQKIESDLQFSSSENRQSLGLPPLRASE 182
           VFCEAY+QV+P++H AM HLFGTWSTVFP  +L KIE  LQFS + N+QS G+  L++SE
Sbjct: 130 VFCEAYRQVNPNLHPAMRHLFGTWSTVFPPSVLHKIEMQLQFSQTGNQQSSGVTSLQSSE 189

Query: 183 SLRPAHDRHINPKYLEVRRQFGHEI-TDSVNYVGRNFVHGHSKNHVRHPAAVRFNNGVDI 359
           S RP H  H+NPKYL   RQF  +   DS     R    G      +H  A    +  D 
Sbjct: 190 SPRPTHGIHVNPKYL---RQFEQQSGADSNTQHVRGMSAGQKLYGQKHTIAY---DEFDS 243

Query: 360 DRTRALIDAYGIDKRSET 413
           D T       G+ + S T
Sbjct: 244 DHTEVPSSHVGVQRLSST 261