BLASTX nr result
ID: Lithospermum23_contig00016975
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00016975
(1120 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_002282635.1 PREDICTED: putative exosome complex component rrp... 405 e-139
XP_019197270.1 PREDICTED: putative exosome complex component rrp... 400 e-137
XP_017249653.1 PREDICTED: putative exosome complex component rrp... 399 e-137
XP_010251261.1 PREDICTED: putative exosome complex component rrp... 398 e-137
XP_011071845.1 PREDICTED: putative exosome complex component rrp... 397 e-136
XP_012080072.1 PREDICTED: putative exosome complex component rrp... 394 e-135
XP_002318044.1 exonuclease-related family protein [Populus trich... 394 e-135
CDP12399.1 unnamed protein product [Coffea canephora] 393 e-135
XP_006439811.1 hypothetical protein CICLE_v10021986mg [Citrus cl... 393 e-134
XP_006476772.1 PREDICTED: putative exosome complex component rrp... 391 e-134
XP_016470915.1 PREDICTED: putative exosome complex component rrp... 390 e-133
XP_011044305.1 PREDICTED: putative exosome complex component rrp... 390 e-133
XP_016492412.1 PREDICTED: putative exosome complex component rrp... 389 e-133
XP_018821286.1 PREDICTED: putative exosome complex component rrp... 389 e-133
XP_009613891.1 PREDICTED: putative exosome complex component rrp... 388 e-133
XP_016666803.1 PREDICTED: putative exosome complex component rrp... 388 e-132
XP_014492890.1 PREDICTED: putative exosome complex component rrp... 387 e-132
XP_016183182.1 PREDICTED: putative exosome complex component rrp... 386 e-132
XP_012478610.1 PREDICTED: putative exosome complex component rrp... 386 e-132
OMO81471.1 Exosome complex RNA-binding protein 1/RRP40/RRP4 [Cor... 385 e-132
>XP_002282635.1 PREDICTED: putative exosome complex component rrp40 isoform X1
[Vitis vinifera] CBI15022.3 unnamed protein product,
partial [Vitis vinifera]
Length = 237
Score = 405 bits (1041), Expect = e-139
Identities = 199/234 (85%), Positives = 219/234 (93%)
Frame = +1
Query: 31 NSLSTFIDQTVVPGDVVLDLSKLTNQTIKLGTGLRQDCDSITVMKAGKLRFSKPNKYWVE 210
N+ ++F+DQ VVPGDVVLDLSK+ NQTIKLG GL QDCD+ITV KAG+LRFSKPNKYWVE
Sbjct: 4 NTPASFVDQLVVPGDVVLDLSKMGNQTIKLGGGLHQDCDAITVTKAGRLRFSKPNKYWVE 63
Query: 211 SSHKRYVPCAGDTILGIVIDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKFEVGALI 390
SS KRYVPC DT+LGIV+DSKA+NFLVDIKGP LAFLPVLAFEGGTRRNIPKFE G L+
Sbjct: 64 SSQKRYVPCVEDTVLGIVVDSKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLL 123
Query: 391 YARVVKANTGMNPELSCMDANGKAAEFGPLKEGFMFESSTGLSRMLLSSPTCPVLDALGK 570
Y RVVKANTGMNPELSC DA+GKAAEFGPLK+G+MFESSTGLSRMLLSSPTCPVL+ALGK
Sbjct: 124 YVRVVKANTGMNPELSCTDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPTCPVLEALGK 183
Query: 571 KLSFEIAVGLNGRVWVNAASPSSIILVSNAIMNSESLSPVQQKIMVDKLLQRVQ 732
KLSFEIAVGLNGRVWVNA+SPS++ILV+NAIMNSESLS VQQKIMVDKLLQR+Q
Sbjct: 184 KLSFEIAVGLNGRVWVNASSPSTVILVANAIMNSESLSVVQQKIMVDKLLQRIQ 237
>XP_019197270.1 PREDICTED: putative exosome complex component rrp40 [Ipomoea nil]
Length = 242
Score = 400 bits (1028), Expect = e-137
Identities = 196/241 (81%), Positives = 223/241 (92%)
Frame = +1
Query: 10 QMETRPPNSLSTFIDQTVVPGDVVLDLSKLTNQTIKLGTGLRQDCDSITVMKAGKLRFSK 189
+ME + PN+LS+FIDQ VVPGDV+LDLS L N+TIKLG GLRQDCD+++VMKAG LR++K
Sbjct: 2 KMEAKQPNTLSSFIDQPVVPGDVILDLSSLANETIKLGGGLRQDCDTVSVMKAGILRYTK 61
Query: 190 PNKYWVESSHKRYVPCAGDTILGIVIDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPK 369
PNKYWVESS KRYVP AGD++LGIV+D+K +NFLVDIKG LAFLPVLAFEGGTRRNIPK
Sbjct: 62 PNKYWVESSQKRYVPSAGDSVLGIVVDTKPDNFLVDIKGSMLAFLPVLAFEGGTRRNIPK 121
Query: 370 FEVGALIYARVVKANTGMNPELSCMDANGKAAEFGPLKEGFMFESSTGLSRMLLSSPTCP 549
FE G LIYARVVKANTGMNPELSCMDA+GKA+EFGPLKEG+MFESSTGLSR+LLSSPTCP
Sbjct: 122 FEAGTLIYARVVKANTGMNPELSCMDASGKASEFGPLKEGYMFESSTGLSRILLSSPTCP 181
Query: 550 VLDALGKKLSFEIAVGLNGRVWVNAASPSSIILVSNAIMNSESLSPVQQKIMVDKLLQRV 729
VL+ALGKKLSFEIA+GLNGR WVNA +P++ ILV+NAIMNSESLS VQQKIMV+KLLQRV
Sbjct: 182 VLEALGKKLSFEIAIGLNGRNWVNAPAPATTILVANAIMNSESLSAVQQKIMVEKLLQRV 241
Query: 730 Q 732
Q
Sbjct: 242 Q 242
>XP_017249653.1 PREDICTED: putative exosome complex component rrp40 isoform X1
[Daucus carota subsp. sativus] KZM93240.1 hypothetical
protein DCAR_016485 [Daucus carota subsp. sativus]
Length = 241
Score = 399 bits (1026), Expect = e-137
Identities = 195/236 (82%), Positives = 218/236 (92%)
Frame = +1
Query: 25 PPNSLSTFIDQTVVPGDVVLDLSKLTNQTIKLGTGLRQDCDSITVMKAGKLRFSKPNKYW 204
P N+ ++ID+ VVPGDVVLDLS ++NQTIKLG GLRQDCDSIT MKAG LRFSKPNKYW
Sbjct: 6 PTNNSPSYIDKLVVPGDVVLDLSSMSNQTIKLGGGLRQDCDSITAMKAGMLRFSKPNKYW 65
Query: 205 VESSHKRYVPCAGDTILGIVIDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKFEVGA 384
VESS KRYVP AGD +LGIV+D+KAENFL+DIKGP LA+LPVLAFEGGTRRNIPKFEVG
Sbjct: 66 VESSQKRYVPSAGDAVLGIVVDTKAENFLIDIKGPALAYLPVLAFEGGTRRNIPKFEVGT 125
Query: 385 LIYARVVKANTGMNPELSCMDANGKAAEFGPLKEGFMFESSTGLSRMLLSSPTCPVLDAL 564
LIY RVVKAN GMNP+LSCMDA+GKAAEFGPLK+G+MFE+STGLSRMLLSSP CPVL+AL
Sbjct: 126 LIYVRVVKANIGMNPDLSCMDASGKAAEFGPLKDGYMFETSTGLSRMLLSSPACPVLEAL 185
Query: 565 GKKLSFEIAVGLNGRVWVNAASPSSIILVSNAIMNSESLSPVQQKIMVDKLLQRVQ 732
GKKLSFEIAVGLNGRVWVNAA+PS++ILVSNAIMNSE+L+ VQQK+MVDKLLQR Q
Sbjct: 186 GKKLSFEIAVGLNGRVWVNAAAPSTVILVSNAIMNSETLTSVQQKLMVDKLLQRTQ 241
>XP_010251261.1 PREDICTED: putative exosome complex component rrp40 isoform X1
[Nelumbo nucifera]
Length = 243
Score = 398 bits (1023), Expect = e-137
Identities = 196/240 (81%), Positives = 220/240 (91%)
Frame = +1
Query: 13 METRPPNSLSTFIDQTVVPGDVVLDLSKLTNQTIKLGTGLRQDCDSITVMKAGKLRFSKP 192
M+ R N ++FIDQ VVPGDVVLDLS ++NQTIKLG GLRQDCD+I+VMKAGKL+FSKP
Sbjct: 1 MDDRSLNLTTSFIDQIVVPGDVVLDLSSMSNQTIKLGGGLRQDCDTISVMKAGKLKFSKP 60
Query: 193 NKYWVESSHKRYVPCAGDTILGIVIDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKF 372
NKYWVESS KRYVPC DTILG V+DSKA+NFLVDIKGPTLAFLPVLAFEGGTRRNIPK+
Sbjct: 61 NKYWVESSQKRYVPCVEDTILGTVVDSKADNFLVDIKGPTLAFLPVLAFEGGTRRNIPKY 120
Query: 373 EVGALIYARVVKANTGMNPELSCMDANGKAAEFGPLKEGFMFESSTGLSRMLLSSPTCPV 552
E G L+Y RVVKAN GMNPELSC DA+GKAAEFG LK+G+MFE+STGLSRMLLSSPTCPV
Sbjct: 121 EAGTLLYVRVVKANAGMNPELSCTDASGKAAEFGVLKDGYMFETSTGLSRMLLSSPTCPV 180
Query: 553 LDALGKKLSFEIAVGLNGRVWVNAASPSSIILVSNAIMNSESLSPVQQKIMVDKLLQRVQ 732
L+ALGKKLSFEIA+GLNGRVWVNAASPS++ILVSNAIMNSESLS VQQ+IMV+KL+Q+ Q
Sbjct: 181 LEALGKKLSFEIAIGLNGRVWVNAASPSTVILVSNAIMNSESLSGVQQRIMVEKLMQKFQ 240
>XP_011071845.1 PREDICTED: putative exosome complex component rrp40 [Sesamum
indicum] XP_011071846.1 PREDICTED: putative exosome
complex component rrp40 [Sesamum indicum] XP_011071847.1
PREDICTED: putative exosome complex component rrp40
[Sesamum indicum]
Length = 240
Score = 397 bits (1019), Expect = e-136
Identities = 195/240 (81%), Positives = 218/240 (90%)
Frame = +1
Query: 13 METRPPNSLSTFIDQTVVPGDVVLDLSKLTNQTIKLGTGLRQDCDSITVMKAGKLRFSKP 192
ME++P S S+F+DQ V PGDVVLDLSK+TNQTIKLG GLRQD D I+VMKAGKLRFSKP
Sbjct: 1 MESKPSVSPSSFVDQQVFPGDVVLDLSKMTNQTIKLGGGLRQDGDVISVMKAGKLRFSKP 60
Query: 193 NKYWVESSHKRYVPCAGDTILGIVIDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKF 372
NKYWVESSHKRYVP AGD +LGIV+D+KA+NFLVDIKGP LAFLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWVESSHKRYVPSAGDNVLGIVVDAKADNFLVDIKGPMLAFLPVLAFEGGTRRNIPKF 120
Query: 373 EVGALIYARVVKANTGMNPELSCMDANGKAAEFGPLKEGFMFESSTGLSRMLLSSPTCPV 552
E+G L+Y RVVKANTGMNPELSCMDA+GKAAE+GPLK+GFMFESSTGLSR LLS+PTCPV
Sbjct: 121 EIGTLLYVRVVKANTGMNPELSCMDASGKAAEYGPLKDGFMFESSTGLSRTLLSTPTCPV 180
Query: 553 LDALGKKLSFEIAVGLNGRVWVNAASPSSIILVSNAIMNSESLSPVQQKIMVDKLLQRVQ 732
L+ LGKKL+FEIAVGLNGRVWVNA SPS I+LV+N IM +ESLSP QQKI V+ LLQR+Q
Sbjct: 181 LETLGKKLAFEIAVGLNGRVWVNATSPSVIVLVANTIMQTESLSPAQQKIKVENLLQRLQ 240
>XP_012080072.1 PREDICTED: putative exosome complex component rrp40 [Jatropha
curcas] KDP31104.1 hypothetical protein JCGZ_11480
[Jatropha curcas]
Length = 241
Score = 394 bits (1013), Expect = e-135
Identities = 192/240 (80%), Positives = 220/240 (91%)
Frame = +1
Query: 13 METRPPNSLSTFIDQTVVPGDVVLDLSKLTNQTIKLGTGLRQDCDSITVMKAGKLRFSKP 192
ME +P +S ++ +D+ VVPGDVV+DLS ++NQTIKLG GLRQDCD+I+V K+GKLRFSKP
Sbjct: 1 MEAKPSSSPTSLVDKLVVPGDVVIDLSTMSNQTIKLGGGLRQDCDAISVTKSGKLRFSKP 60
Query: 193 NKYWVESSHKRYVPCAGDTILGIVIDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKF 372
NKYWVE S KRYVPCA D++LGIV+DSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWVEGSQKRYVPCAEDSVLGIVVDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKF 120
Query: 373 EVGALIYARVVKANTGMNPELSCMDANGKAAEFGPLKEGFMFESSTGLSRMLLSSPTCPV 552
EVG L+Y RVVKAN GMNPELSC DA+GKAAEFG LK+G+MFE STGLSRMLLSSPTCPV
Sbjct: 121 EVGTLLYVRVVKANPGMNPELSCTDASGKAAEFGVLKDGYMFECSTGLSRMLLSSPTCPV 180
Query: 553 LDALGKKLSFEIAVGLNGRVWVNAASPSSIILVSNAIMNSESLSPVQQKIMVDKLLQRVQ 732
L+ALG KLSFEIAVGLNGRVWVNA SPS++I+V+NAIMNSE+LS VQQKIMV+KLLQ++Q
Sbjct: 181 LEALGNKLSFEIAVGLNGRVWVNATSPSTVIIVANAIMNSETLSGVQQKIMVEKLLQKIQ 240
>XP_002318044.1 exonuclease-related family protein [Populus trichocarpa] ABK93275.1
unknown [Populus trichocarpa] EEE96264.1
exonuclease-related family protein [Populus trichocarpa]
Length = 242
Score = 394 bits (1013), Expect = e-135
Identities = 192/240 (80%), Positives = 219/240 (91%)
Frame = +1
Query: 13 METRPPNSLSTFIDQTVVPGDVVLDLSKLTNQTIKLGTGLRQDCDSITVMKAGKLRFSKP 192
ME++ S +TFID VVPGDVV+DLS +TNQTIKLG+GLRQDCD+I+VMKAGKLRFSKP
Sbjct: 1 MESKSSGSPATFIDNLVVPGDVVVDLSSMTNQTIKLGSGLRQDCDAISVMKAGKLRFSKP 60
Query: 193 NKYWVESSHKRYVPCAGDTILGIVIDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKF 372
NKYWVE+S KRYVPCA D++LGIV+DSK++NFL+DIKGP LAFLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWVETSQKRYVPCAEDSVLGIVVDSKSDNFLIDIKGPALAFLPVLAFEGGTRRNIPKF 120
Query: 373 EVGALIYARVVKANTGMNPELSCMDANGKAAEFGPLKEGFMFESSTGLSRMLLSSPTCPV 552
E G L+Y RVVKAN GMNPELSC DA+GKAAEFG LK+G+MFE STGLSRMLLSSPTCPV
Sbjct: 121 EAGTLLYVRVVKANPGMNPELSCTDASGKAAEFGALKDGYMFECSTGLSRMLLSSPTCPV 180
Query: 553 LDALGKKLSFEIAVGLNGRVWVNAASPSSIILVSNAIMNSESLSPVQQKIMVDKLLQRVQ 732
L+ALGKKLSFEIAVGLNGRVWVNA SPS +I+V+NAIMNSE+LS VQQKIM +KLLQ++Q
Sbjct: 181 LEALGKKLSFEIAVGLNGRVWVNANSPSIVIIVANAIMNSETLSGVQQKIMAEKLLQKIQ 240
>CDP12399.1 unnamed protein product [Coffea canephora]
Length = 240
Score = 393 bits (1010), Expect = e-135
Identities = 193/240 (80%), Positives = 220/240 (91%)
Frame = +1
Query: 13 METRPPNSLSTFIDQTVVPGDVVLDLSKLTNQTIKLGTGLRQDCDSITVMKAGKLRFSKP 192
ME++P +S FIDQ VVPGDVVLDLS +TNQTIKLG+GLRQD D+I+ +KAG LRF+KP
Sbjct: 1 MESKPSSSPPNFIDQQVVPGDVVLDLSTMTNQTIKLGSGLRQDGDAISAIKAGVLRFAKP 60
Query: 193 NKYWVESSHKRYVPCAGDTILGIVIDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKF 372
NKYWVESS KRYVPCAGDT+LGIV+DS+++NFLVDIKGPTLAFLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWVESSQKRYVPCAGDTVLGIVVDSRSDNFLVDIKGPTLAFLPVLAFEGGTRRNIPKF 120
Query: 373 EVGALIYARVVKANTGMNPELSCMDANGKAAEFGPLKEGFMFESSTGLSRMLLSSPTCPV 552
EVG L+Y RVVKAN GMNPELSCMDA+GKAAEFG LK+G+MFESSTGLSRMLLSSPTCPV
Sbjct: 121 EVGTLLYVRVVKANVGMNPELSCMDASGKAAEFGRLKDGYMFESSTGLSRMLLSSPTCPV 180
Query: 553 LDALGKKLSFEIAVGLNGRVWVNAASPSSIILVSNAIMNSESLSPVQQKIMVDKLLQRVQ 732
L+A GK LSFEIAVGLNGRVWVNA SP+++ILV+NAIM SESLS VQQK +V++LL+RVQ
Sbjct: 181 LEAFGKNLSFEIAVGLNGRVWVNAESPANLILVANAIMKSESLSAVQQKFLVERLLKRVQ 240
>XP_006439811.1 hypothetical protein CICLE_v10021986mg [Citrus clementina]
XP_006439812.1 hypothetical protein CICLE_v10021986mg
[Citrus clementina] ESR53051.1 hypothetical protein
CICLE_v10021986mg [Citrus clementina] ESR53052.1
hypothetical protein CICLE_v10021986mg [Citrus
clementina]
Length = 238
Score = 393 bits (1009), Expect = e-134
Identities = 191/240 (79%), Positives = 220/240 (91%)
Frame = +1
Query: 13 METRPPNSLSTFIDQTVVPGDVVLDLSKLTNQTIKLGTGLRQDCDSITVMKAGKLRFSKP 192
ME +P S + +D+ VVPGDVVLDLS +TNQTIKLG GLRQ+CDS++V+KAGKLRFSKP
Sbjct: 1 MEAKP--STTNLVDKIVVPGDVVLDLSSMTNQTIKLGGGLRQECDSVSVIKAGKLRFSKP 58
Query: 193 NKYWVESSHKRYVPCAGDTILGIVIDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKF 372
NKYWVESSHKRYVPC DT+LGIV+D KA+NF VDI+GPT+AFLPVLAFEGGTRRNIPKF
Sbjct: 59 NKYWVESSHKRYVPCVEDTVLGIVVDCKADNFFVDIRGPTIAFLPVLAFEGGTRRNIPKF 118
Query: 373 EVGALIYARVVKANTGMNPELSCMDANGKAAEFGPLKEGFMFESSTGLSRMLLSSPTCPV 552
E+G+L+Y RVVKAN GMNPELSC DA+GKAAEFG LK+G+MFE+S+GLSRMLLSSPTCPV
Sbjct: 119 EIGSLLYVRVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSSGLSRMLLSSPTCPV 178
Query: 553 LDALGKKLSFEIAVGLNGRVWVNAASPSSIILVSNAIMNSESLSPVQQKIMVDKLLQRVQ 732
L+ LGK+LSFEIAVGLNGRVWVNA SPS+++LVSNAIMNSESLS VQQKIMVDKLLQR++
Sbjct: 179 LEELGKQLSFEIAVGLNGRVWVNAESPSTVVLVSNAIMNSESLSAVQQKIMVDKLLQRIK 238
>XP_006476772.1 PREDICTED: putative exosome complex component rrp40 [Citrus
sinensis] XP_006476773.1 PREDICTED: putative exosome
complex component rrp40 [Citrus sinensis] XP_015385315.1
PREDICTED: putative exosome complex component rrp40
[Citrus sinensis] XP_015385316.1 PREDICTED: putative
exosome complex component rrp40 [Citrus sinensis]
KDO69672.1 hypothetical protein CISIN_1g026458mg [Citrus
sinensis] KDO69673.1 hypothetical protein
CISIN_1g026458mg [Citrus sinensis]
Length = 238
Score = 391 bits (1005), Expect = e-134
Identities = 191/240 (79%), Positives = 219/240 (91%)
Frame = +1
Query: 13 METRPPNSLSTFIDQTVVPGDVVLDLSKLTNQTIKLGTGLRQDCDSITVMKAGKLRFSKP 192
ME +P S + +D+ VVPGDVVLDLS +TNQTIKLG GLRQ+CDS++V+KAGKLRFSKP
Sbjct: 1 MEAKP--STANLVDKIVVPGDVVLDLSSMTNQTIKLGGGLRQECDSVSVIKAGKLRFSKP 58
Query: 193 NKYWVESSHKRYVPCAGDTILGIVIDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKF 372
NKYWVESS KRYVPC DT+LGIV+D KA+NF VDI+GPT+AFLPVLAFEGGTRRNIPKF
Sbjct: 59 NKYWVESSQKRYVPCVEDTVLGIVVDCKADNFFVDIRGPTIAFLPVLAFEGGTRRNIPKF 118
Query: 373 EVGALIYARVVKANTGMNPELSCMDANGKAAEFGPLKEGFMFESSTGLSRMLLSSPTCPV 552
E+G+L+Y RVVKAN GMNPELSC DA+GKAAEFG LK+G+MFE+STGLSRMLLSSPTCPV
Sbjct: 119 EIGSLLYVRVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSTGLSRMLLSSPTCPV 178
Query: 553 LDALGKKLSFEIAVGLNGRVWVNAASPSSIILVSNAIMNSESLSPVQQKIMVDKLLQRVQ 732
L+ LGK+LSFEIAVGLNGRVWVNA SPS+++LVSNAIMNSESLS VQQKIMVDKLLQR++
Sbjct: 179 LEELGKQLSFEIAVGLNGRVWVNAESPSTVVLVSNAIMNSESLSAVQQKIMVDKLLQRIK 238
>XP_016470915.1 PREDICTED: putative exosome complex component rrp40 [Nicotiana
tabacum]
Length = 240
Score = 390 bits (1002), Expect = e-133
Identities = 192/239 (80%), Positives = 220/239 (92%)
Frame = +1
Query: 13 METRPPNSLSTFIDQTVVPGDVVLDLSKLTNQTIKLGTGLRQDCDSITVMKAGKLRFSKP 192
M ++P + STFID++VVPGDV+LDLSKLT+QTIKLG GL QD D+ITV+KAG LRFSKP
Sbjct: 1 MASKPLPTRSTFIDKSVVPGDVILDLSKLTDQTIKLGGGLHQDHDAITVVKAGILRFSKP 60
Query: 193 NKYWVESSHKRYVPCAGDTILGIVIDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKF 372
NKYW+ESSHKRY+P GDT+LGIV+D++A+NF VDIKGP +AFLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWIESSHKRYIPTVGDTVLGIVVDTRADNFFVDIKGPMVAFLPVLAFEGGTRRNIPKF 120
Query: 373 EVGALIYARVVKANTGMNPELSCMDANGKAAEFGPLKEGFMFESSTGLSRMLLSSPTCPV 552
EVG LIYARVVKANTGMNPELSCMDA+GKAAEFG +K+G+MFESSTGLSRMLLSSPTCPV
Sbjct: 121 EVGTLIYARVVKANTGMNPELSCMDASGKAAEFGLIKDGYMFESSTGLSRMLLSSPTCPV 180
Query: 553 LDALGKKLSFEIAVGLNGRVWVNAASPSSIILVSNAIMNSESLSPVQQKIMVDKLLQRV 729
L+ LGKKL+FEIAVGLNGRVWVNA S+IILV+NAIMNSESL+PVQQKIMV++LL RV
Sbjct: 181 LEGLGKKLAFEIAVGLNGRVWVNAEHQSTIILVANAIMNSESLTPVQQKIMVERLLDRV 239
>XP_011044305.1 PREDICTED: putative exosome complex component rrp40 [Populus
euphratica]
Length = 242
Score = 390 bits (1002), Expect = e-133
Identities = 190/240 (79%), Positives = 218/240 (90%)
Frame = +1
Query: 13 METRPPNSLSTFIDQTVVPGDVVLDLSKLTNQTIKLGTGLRQDCDSITVMKAGKLRFSKP 192
ME++ S +TFID VVPGDVV+DLS +TNQTIKLG GLRQDCD+I+VMKAGKLRFSKP
Sbjct: 1 MESKSSGSPATFIDNLVVPGDVVVDLSSMTNQTIKLGGGLRQDCDAISVMKAGKLRFSKP 60
Query: 193 NKYWVESSHKRYVPCAGDTILGIVIDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKF 372
NKYWVE+S KRYVPCA D+ILGIV+DSK++NFL+D+KGP LAFLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWVETSQKRYVPCAEDSILGIVVDSKSDNFLIDMKGPALAFLPVLAFEGGTRRNIPKF 120
Query: 373 EVGALIYARVVKANTGMNPELSCMDANGKAAEFGPLKEGFMFESSTGLSRMLLSSPTCPV 552
E G L+Y RVVKAN GM+PELSC DA+GKAAEFG LK+G+MFE STGLSRMLLSSPTCPV
Sbjct: 121 EAGTLLYVRVVKANPGMSPELSCTDASGKAAEFGALKDGYMFECSTGLSRMLLSSPTCPV 180
Query: 553 LDALGKKLSFEIAVGLNGRVWVNAASPSSIILVSNAIMNSESLSPVQQKIMVDKLLQRVQ 732
L+ALGKKLSFEIAVGLNGRVWVNA SPS +I+V+NAIMNSE+LS +QQKIM +KLLQ++Q
Sbjct: 181 LEALGKKLSFEIAVGLNGRVWVNANSPSIVIIVANAIMNSETLSGIQQKIMAEKLLQKIQ 240
>XP_016492412.1 PREDICTED: putative exosome complex component rrp40 [Nicotiana
tabacum]
Length = 240
Score = 389 bits (1000), Expect = e-133
Identities = 192/239 (80%), Positives = 219/239 (91%)
Frame = +1
Query: 13 METRPPNSLSTFIDQTVVPGDVVLDLSKLTNQTIKLGTGLRQDCDSITVMKAGKLRFSKP 192
M ++P + STFID+ VVPGDV+LDLSKLT+QTIKLG GL+QD D+ITV+KAG LRFSKP
Sbjct: 1 MASKPLPTRSTFIDKPVVPGDVILDLSKLTDQTIKLGGGLQQDHDAITVVKAGTLRFSKP 60
Query: 193 NKYWVESSHKRYVPCAGDTILGIVIDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKF 372
NKYW+ESSHKRY+P GDT+LGIV+D++A+NF VDIKGP +AFLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWIESSHKRYIPTVGDTVLGIVVDTRADNFFVDIKGPMMAFLPVLAFEGGTRRNIPKF 120
Query: 373 EVGALIYARVVKANTGMNPELSCMDANGKAAEFGPLKEGFMFESSTGLSRMLLSSPTCPV 552
EVG LIYARVVKANTGMNPELSCMDA+GKAAEFG +K G+MFESSTGLSRMLLSSPTCPV
Sbjct: 121 EVGTLIYARVVKANTGMNPELSCMDASGKAAEFGLIKGGYMFESSTGLSRMLLSSPTCPV 180
Query: 553 LDALGKKLSFEIAVGLNGRVWVNAASPSSIILVSNAIMNSESLSPVQQKIMVDKLLQRV 729
L+ LGKKL+FEIAVGLNGRVWVNA S+IILV+NAIMNSESL+PVQQKIMV++LL RV
Sbjct: 181 LEGLGKKLAFEIAVGLNGRVWVNAEHQSTIILVANAIMNSESLTPVQQKIMVERLLDRV 239
>XP_018821286.1 PREDICTED: putative exosome complex component rrp40 [Juglans regia]
Length = 243
Score = 389 bits (998), Expect = e-133
Identities = 192/240 (80%), Positives = 215/240 (89%)
Frame = +1
Query: 13 METRPPNSLSTFIDQTVVPGDVVLDLSKLTNQTIKLGTGLRQDCDSITVMKAGKLRFSKP 192
ME P S ++F+DQ VVPGDVVLDL+ +TNQTIKLG GLRQDCD+I V KAGKLR SKP
Sbjct: 1 MENNPSGSPASFVDQLVVPGDVVLDLNSMTNQTIKLGGGLRQDCDAIAVTKAGKLRCSKP 60
Query: 193 NKYWVESSHKRYVPCAGDTILGIVIDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKF 372
NKYWVESS KRY P AGD++LGIV+DSKA+NFLVDIKGP LA+LPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWVESSQKRYEPHAGDSVLGIVVDSKADNFLVDIKGPALAYLPVLAFEGGTRRNIPKF 120
Query: 373 EVGALIYARVVKANTGMNPELSCMDANGKAAEFGPLKEGFMFESSTGLSRMLLSSPTCPV 552
EVG L+Y RVVKAN GMNPELSC DA+GKAAEFG LK+G+MFESSTGLSR LLSSPTCPV
Sbjct: 121 EVGTLLYVRVVKANPGMNPELSCTDASGKAAEFGQLKDGYMFESSTGLSRTLLSSPTCPV 180
Query: 553 LDALGKKLSFEIAVGLNGRVWVNAASPSSIILVSNAIMNSESLSPVQQKIMVDKLLQRVQ 732
LD LGKKLSFEIAVGLNGRVWVNA SPS++I+V+NAIMNSESLS VQQ+IMV+KLLQ ++
Sbjct: 181 LDVLGKKLSFEIAVGLNGRVWVNATSPSTVIVVANAIMNSESLSAVQQRIMVEKLLQNLK 240
>XP_009613891.1 PREDICTED: putative exosome complex component rrp40 isoform X1
[Nicotiana tomentosiformis] XP_018629910.1 PREDICTED:
putative exosome complex component rrp40 isoform X1
[Nicotiana tomentosiformis]
Length = 240
Score = 388 bits (997), Expect = e-133
Identities = 191/239 (79%), Positives = 219/239 (91%)
Frame = +1
Query: 13 METRPPNSLSTFIDQTVVPGDVVLDLSKLTNQTIKLGTGLRQDCDSITVMKAGKLRFSKP 192
M ++P + STFID+ VVPGDV+LDLSKLT+QTIKLG GL+QD D+ITV+KAG LRFSKP
Sbjct: 1 MASKPLPTRSTFIDKPVVPGDVILDLSKLTDQTIKLGGGLQQDHDAITVVKAGTLRFSKP 60
Query: 193 NKYWVESSHKRYVPCAGDTILGIVIDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKF 372
NKYW+ESSHKRY+P GD++LGIV+D++A+NF VDIKGP +AFLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWIESSHKRYIPSVGDSVLGIVVDTRADNFFVDIKGPMMAFLPVLAFEGGTRRNIPKF 120
Query: 373 EVGALIYARVVKANTGMNPELSCMDANGKAAEFGPLKEGFMFESSTGLSRMLLSSPTCPV 552
EVG LIYARVVKANTGMNPELSCMDA+GKAAEFG +K G+MFESSTGLSRMLLSSPTCPV
Sbjct: 121 EVGTLIYARVVKANTGMNPELSCMDASGKAAEFGHIKGGYMFESSTGLSRMLLSSPTCPV 180
Query: 553 LDALGKKLSFEIAVGLNGRVWVNAASPSSIILVSNAIMNSESLSPVQQKIMVDKLLQRV 729
L+ LGKKL+FEIAVGLNGRVWVNA S+IILV+NAIMNSESL+PVQQKIMV++LL RV
Sbjct: 181 LEGLGKKLAFEIAVGLNGRVWVNAEHQSTIILVANAIMNSESLTPVQQKIMVERLLDRV 239
>XP_016666803.1 PREDICTED: putative exosome complex component rrp40 isoform X2
[Gossypium hirsutum] XP_017635430.1 PREDICTED: putative
exosome complex component rrp40 isoform X2 [Gossypium
arboreum]
Length = 240
Score = 388 bits (996), Expect = e-132
Identities = 189/240 (78%), Positives = 215/240 (89%)
Frame = +1
Query: 13 METRPPNSLSTFIDQTVVPGDVVLDLSKLTNQTIKLGTGLRQDCDSITVMKAGKLRFSKP 192
ME + +S ++F+D TVVPGDVVLDLS +T+QTIKLG GLRQDCD+I+ MKAG LRFSKP
Sbjct: 1 MENKQSSSPASFVDSTVVPGDVVLDLSSMTSQTIKLGGGLRQDCDAISAMKAGTLRFSKP 60
Query: 193 NKYWVESSHKRYVPCAGDTILGIVIDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKF 372
NKYW+ESS KRYVPC DTILGIV+DSKA+NFL+DIKGP + FLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWIESSQKRYVPCVEDTILGIVVDSKADNFLIDIKGPAMGFLPVLAFEGGTRRNIPKF 120
Query: 373 EVGALIYARVVKANTGMNPELSCMDANGKAAEFGPLKEGFMFESSTGLSRMLLSSPTCPV 552
EVG L+Y RVVKAN GMNPELSC DA+GKAAEFGPLK+G+MFE+STGLSR LLSSPTCPV
Sbjct: 121 EVGTLLYLRVVKANFGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRKLLSSPTCPV 180
Query: 553 LDALGKKLSFEIAVGLNGRVWVNAASPSSIILVSNAIMNSESLSPVQQKIMVDKLLQRVQ 732
L+ALGKKLSFEIAVGLNGRVWVNAASP +I++V+NAIMNSESLS QQ IMVD LL+ +Q
Sbjct: 181 LEALGKKLSFEIAVGLNGRVWVNAASPDTIVVVANAIMNSESLSGAQQIIMVDHLLKNIQ 240
>XP_014492890.1 PREDICTED: putative exosome complex component rrp40 [Vigna radiata
var. radiata] XP_014492891.1 PREDICTED: putative exosome
complex component rrp40 [Vigna radiata var. radiata]
Length = 240
Score = 387 bits (993), Expect = e-132
Identities = 188/240 (78%), Positives = 216/240 (90%)
Frame = +1
Query: 13 METRPPNSLSTFIDQTVVPGDVVLDLSKLTNQTIKLGTGLRQDCDSITVMKAGKLRFSKP 192
MET+P +S + F+DQ V PGDVVLDLS +TNQTIKLG GLRQDCD+I+VMKAG+LRFSKP
Sbjct: 1 METKPSSSSANFVDQLVCPGDVVLDLSSMTNQTIKLGGGLRQDCDAISVMKAGRLRFSKP 60
Query: 193 NKYWVESSHKRYVPCAGDTILGIVIDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKF 372
NKYWVE+S KRYVP A D++LGIV DS+++NFLVDIKGP +AFLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWVENSQKRYVPHAEDSVLGIVADSRSDNFLVDIKGPAIAFLPVLAFEGGTRRNIPKF 120
Query: 373 EVGALIYARVVKANTGMNPELSCMDANGKAAEFGPLKEGFMFESSTGLSRMLLSSPTCPV 552
E+G L+YARVVKAN GMNPELSC DA GKAAEFG LK+G+MFE +TGLSR LLSSPTCPV
Sbjct: 121 EIGTLLYARVVKANPGMNPELSCTDATGKAAEFGALKDGYMFECTTGLSRRLLSSPTCPV 180
Query: 553 LDALGKKLSFEIAVGLNGRVWVNAASPSSIILVSNAIMNSESLSPVQQKIMVDKLLQRVQ 732
LDALGKK+SFEIAVGLNGRVWV AASP + I+V+NAIMNSE+LS QQ+IMV+KLLQR+Q
Sbjct: 181 LDALGKKISFEIAVGLNGRVWVKAASPQTTIIVANAIMNSETLSDAQQRIMVEKLLQRIQ 240
>XP_016183182.1 PREDICTED: putative exosome complex component rrp40 [Arachis
ipaensis]
Length = 240
Score = 386 bits (991), Expect = e-132
Identities = 192/240 (80%), Positives = 216/240 (90%)
Frame = +1
Query: 13 METRPPNSLSTFIDQTVVPGDVVLDLSKLTNQTIKLGTGLRQDCDSITVMKAGKLRFSKP 192
ME+R +S ++ +D+ V PGDVVLDLS LTNQTIKLG GL QDCD+I+VMKAGKLRFSKP
Sbjct: 1 MESRQSSSSTSLVDKLVCPGDVVLDLSNLTNQTIKLGGGLYQDCDAISVMKAGKLRFSKP 60
Query: 193 NKYWVESSHKRYVPCAGDTILGIVIDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKF 372
NKYWVESS KRYVP A D++LGIV+DS+++NFLVDIKGP+LAFLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWVESSQKRYVPHAEDSVLGIVVDSRSDNFLVDIKGPSLAFLPVLAFEGGTRRNIPKF 120
Query: 373 EVGALIYARVVKANTGMNPELSCMDANGKAAEFGPLKEGFMFESSTGLSRMLLSSPTCPV 552
E G LIY RVVKAN GMNPELSC DA G+AAE+G LKEGFMFE STGLSR LLSSPTCPV
Sbjct: 121 EAGTLIYVRVVKANPGMNPELSCTDATGRAAEYGALKEGFMFECSTGLSRTLLSSPTCPV 180
Query: 553 LDALGKKLSFEIAVGLNGRVWVNAASPSSIILVSNAIMNSESLSPVQQKIMVDKLLQRVQ 732
L+ALGKKLSFEIAVGLNGRVWVN+ASPS+ I+VSNAIMNSESLS QQ+IMV+KLLQR+Q
Sbjct: 181 LEALGKKLSFEIAVGLNGRVWVNSASPSTTIIVSNAIMNSESLSGAQQRIMVEKLLQRIQ 240
>XP_012478610.1 PREDICTED: putative exosome complex component rrp40 isoform X1
[Gossypium raimondii] KJB30309.1 hypothetical protein
B456_005G137000 [Gossypium raimondii]
Length = 240
Score = 386 bits (991), Expect = e-132
Identities = 188/240 (78%), Positives = 213/240 (88%)
Frame = +1
Query: 13 METRPPNSLSTFIDQTVVPGDVVLDLSKLTNQTIKLGTGLRQDCDSITVMKAGKLRFSKP 192
ME + +S ++F+D TVVPGDVVLDLS +TNQTIKLG GLRQDCD+I+ MKAG LRFSKP
Sbjct: 1 MENKQSSSPASFVDSTVVPGDVVLDLSSMTNQTIKLGGGLRQDCDAISAMKAGTLRFSKP 60
Query: 193 NKYWVESSHKRYVPCAGDTILGIVIDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKF 372
NKYW+ESS KRYVPC DTILGIV+DSKA+NFL+DIKGP + FLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWIESSQKRYVPCVEDTILGIVVDSKADNFLIDIKGPAMGFLPVLAFEGGTRRNIPKF 120
Query: 373 EVGALIYARVVKANTGMNPELSCMDANGKAAEFGPLKEGFMFESSTGLSRMLLSSPTCPV 552
EVG L+Y RVVKAN GMNPELSC DA+GKAAEFGPLK+G+MFE+STGLSR LLSSP CPV
Sbjct: 121 EVGTLLYLRVVKANFGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRKLLSSPACPV 180
Query: 553 LDALGKKLSFEIAVGLNGRVWVNAASPSSIILVSNAIMNSESLSPVQQKIMVDKLLQRVQ 732
L+ALGKKLSFEIAVGLNGRVWVNAASP +I++V+NAIMNSE LS QQ IMVD LL+ +Q
Sbjct: 181 LEALGKKLSFEIAVGLNGRVWVNAASPDTIVVVANAIMNSECLSGAQQIIMVDHLLKNIQ 240
>OMO81471.1 Exosome complex RNA-binding protein 1/RRP40/RRP4 [Corchorus
capsularis]
Length = 240
Score = 385 bits (990), Expect = e-132
Identities = 189/240 (78%), Positives = 214/240 (89%)
Frame = +1
Query: 13 METRPPNSLSTFIDQTVVPGDVVLDLSKLTNQTIKLGTGLRQDCDSITVMKAGKLRFSKP 192
ME + S ++FID TVVPGDVVLDLS +TNQTIKLG GLRQDCD+I+VMKAG LRF+KP
Sbjct: 1 MEKKESGSPASFIDSTVVPGDVVLDLSSMTNQTIKLGGGLRQDCDAISVMKAGTLRFTKP 60
Query: 193 NKYWVESSHKRYVPCAGDTILGIVIDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKF 372
NKYWVESS KRYVPC DT+LGIV+DSKA+N L+DIKGP LAFLPVLAFEGGTRRNIPKF
Sbjct: 61 NKYWVESSQKRYVPCVEDTVLGIVVDSKADNLLIDIKGPALAFLPVLAFEGGTRRNIPKF 120
Query: 373 EVGALIYARVVKANTGMNPELSCMDANGKAAEFGPLKEGFMFESSTGLSRMLLSSPTCPV 552
EVG L+Y RVVKAN GMNPELSC DA+GKAAEFGPLK+G+MFE+STGLSR LLSSPTCPV
Sbjct: 121 EVGTLLYLRVVKANFGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRKLLSSPTCPV 180
Query: 553 LDALGKKLSFEIAVGLNGRVWVNAASPSSIILVSNAIMNSESLSPVQQKIMVDKLLQRVQ 732
L+ALGKK+SFEIAVGLNGR WVNAASP +II+V+NAIMNSESLS QQ IMV+ LL+ ++
Sbjct: 181 LEALGKKISFEIAVGLNGRAWVNAASPETIIVVANAIMNSESLSAAQQIIMVEHLLKNIE 240