BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00016709
         (420 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_015891572.1 PREDICTED: mediator of RNA polymerase II transcri...   176   2e-48
XP_015891549.1 PREDICTED: mediator of RNA polymerase II transcri...   176   2e-48
XP_016696075.1 PREDICTED: mediator of RNA polymerase II transcri...   176   2e-48
XP_016696074.1 PREDICTED: mediator of RNA polymerase II transcri...   176   2e-48
XP_016696073.1 PREDICTED: mediator of RNA polymerase II transcri...   176   2e-48
KHG10948.1 Tryptase [Gossypium arboreum]                              176   2e-48
XP_016709518.1 PREDICTED: mediator of RNA polymerase II transcri...   176   2e-48
XP_016709517.1 PREDICTED: mediator of RNA polymerase II transcri...   176   2e-48
XP_017630337.1 PREDICTED: mediator of RNA polymerase II transcri...   176   2e-48
XP_016709516.1 PREDICTED: mediator of RNA polymerase II transcri...   176   2e-48
XP_016696072.1 PREDICTED: mediator of RNA polymerase II transcri...   176   2e-48
OMP04999.1 hypothetical protein COLO4_09143 [Corchorus olitorius]     175   3e-48
CDP03599.1 unnamed protein product [Coffea canephora]                 175   3e-48
EOX94837.1 REF4-related 1, putative isoform 2 [Theobroma cacao]       174   5e-48
XP_007050680.2 PREDICTED: mediator of RNA polymerase II transcri...   174   6e-48
EOX94836.1 Reduced epidermal fluorescence 4, putative isoform 1 ...   174   6e-48
OMO77792.1 hypothetical protein CCACVL1_14830 [Corchorus capsula...   172   3e-47
XP_012490520.1 PREDICTED: mediator of RNA polymerase II transcri...   172   4e-47
XP_012490519.1 PREDICTED: mediator of RNA polymerase II transcri...   172   4e-47
XP_012490518.1 PREDICTED: mediator of RNA polymerase II transcri...   172   4e-47

>XP_015891572.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           33B-like, partial [Ziziphus jujuba]
          Length = 1183

 Score =  176 bits (446), Expect = 2e-48
 Identities = 81/139 (58%), Positives = 114/139 (82%)
 Frame = -2

Query: 419 GKWLPQVLQKLLQERDSNEGPEPRLDTCLCLLLSITPIAILNLIEDEESPQMDEVDKNPL 240
           G W+   L+ + +ERD +EGP PRLDTCLC+LLSIT +A+ N++E+EES  ++E +++P 
Sbjct: 244 GLWIA-ALRLVQRERDPSEGPVPRLDTCLCMLLSITTLAVTNIVEEEESELLEETERSPT 302

Query: 239 GQKSENQTVGKRRQDLISSLQQLDDYEILLTSPLPLSSVANQAAAKAMMYLSGITVGNGY 60
            Q++E Q +G+RR++LI+SLQ L DYE LLT P  +SS ANQAAAKAMM++SG+TVGNGY
Sbjct: 303 NQRTEKQAMGQRRKELITSLQLLGDYEGLLTPPQSVSSAANQAAAKAMMFISGLTVGNGY 362

Query: 59  FDGVSLNDMPINCSGNLRH 3
           ++ VS+NDMP+NC+GN+RH
Sbjct: 363 YECVSVNDMPVNCNGNMRH 381


>XP_015891549.1 PREDICTED: mediator of RNA polymerase II transcription subunit 33B
           [Ziziphus jujuba]
          Length = 1325

 Score =  176 bits (446), Expect = 2e-48
 Identities = 81/139 (58%), Positives = 114/139 (82%)
 Frame = -2

Query: 419 GKWLPQVLQKLLQERDSNEGPEPRLDTCLCLLLSITPIAILNLIEDEESPQMDEVDKNPL 240
           G W+   L+ + +ERD +EGP PRLDTCLC+LLSIT +A+ N++E+EES  ++E +++P 
Sbjct: 374 GLWIA-ALRLVQRERDPSEGPVPRLDTCLCMLLSITTLAVTNIVEEEESELLEETERSPT 432

Query: 239 GQKSENQTVGKRRQDLISSLQQLDDYEILLTSPLPLSSVANQAAAKAMMYLSGITVGNGY 60
            Q++E Q +G+RR++LI+SLQ L DYE LLT P  +SS ANQAAAKAMM++SG+TVGNGY
Sbjct: 433 NQRTEKQAMGQRRKELITSLQLLGDYEGLLTPPQSVSSAANQAAAKAMMFISGLTVGNGY 492

Query: 59  FDGVSLNDMPINCSGNLRH 3
           ++ VS+NDMP+NC+GN+RH
Sbjct: 493 YECVSVNDMPVNCNGNMRH 511


>XP_016696075.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           33B-like isoform X4 [Gossypium hirsutum]
          Length = 1194

 Score =  176 bits (445), Expect = 2e-48
 Identities = 84/139 (60%), Positives = 110/139 (79%)
 Frame = -2

Query: 419 GKWLPQVLQKLLQERDSNEGPEPRLDTCLCLLLSITPIAILNLIEDEESPQMDEVDKNPL 240
           G W+   L+ + +ERD +EGP PRLDTCLC+LLSITP+ + N++E+EES  +D  D +P 
Sbjct: 239 GLWIA-ALRLVQRERDISEGPVPRLDTCLCMLLSITPLVVANIVEEEESELIDGCDCSPT 297

Query: 239 GQKSENQTVGKRRQDLISSLQQLDDYEILLTSPLPLSSVANQAAAKAMMYLSGITVGNGY 60
            Q  E Q+ G+ RQDLISSLQ L DYE LLT P P+ SVANQAAAKA+M++SG+TVGNGY
Sbjct: 298 NQIKEKQSPGRCRQDLISSLQMLGDYEALLTPPQPVRSVANQAAAKAIMFVSGLTVGNGY 357

Query: 59  FDGVSLNDMPINCSGNLRH 3
           ++ +S+NDMP+NCSGN+RH
Sbjct: 358 YECMSINDMPMNCSGNMRH 376


>XP_016696074.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           33B-like isoform X3 [Gossypium hirsutum]
          Length = 1196

 Score =  176 bits (445), Expect = 2e-48
 Identities = 84/139 (60%), Positives = 110/139 (79%)
 Frame = -2

Query: 419 GKWLPQVLQKLLQERDSNEGPEPRLDTCLCLLLSITPIAILNLIEDEESPQMDEVDKNPL 240
           G W+   L+ + +ERD +EGP PRLDTCLC+LLSITP+ + N++E+EES  +D  D +P 
Sbjct: 241 GLWIA-ALRLVQRERDISEGPVPRLDTCLCMLLSITPLVVANIVEEEESELIDGCDCSPT 299

Query: 239 GQKSENQTVGKRRQDLISSLQQLDDYEILLTSPLPLSSVANQAAAKAMMYLSGITVGNGY 60
            Q  E Q+ G+ RQDLISSLQ L DYE LLT P P+ SVANQAAAKA+M++SG+TVGNGY
Sbjct: 300 NQIKEKQSPGRCRQDLISSLQMLGDYEALLTPPQPVRSVANQAAAKAIMFVSGLTVGNGY 359

Query: 59  FDGVSLNDMPINCSGNLRH 3
           ++ +S+NDMP+NCSGN+RH
Sbjct: 360 YECMSINDMPMNCSGNMRH 378


>XP_016696073.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           33B-like isoform X2 [Gossypium hirsutum]
          Length = 1212

 Score =  176 bits (445), Expect = 2e-48
 Identities = 84/139 (60%), Positives = 110/139 (79%)
 Frame = -2

Query: 419 GKWLPQVLQKLLQERDSNEGPEPRLDTCLCLLLSITPIAILNLIEDEESPQMDEVDKNPL 240
           G W+   L+ + +ERD +EGP PRLDTCLC+LLSITP+ + N++E+EES  +D  D +P 
Sbjct: 257 GLWIA-ALRLVQRERDISEGPVPRLDTCLCMLLSITPLVVANIVEEEESELIDGCDCSPT 315

Query: 239 GQKSENQTVGKRRQDLISSLQQLDDYEILLTSPLPLSSVANQAAAKAMMYLSGITVGNGY 60
            Q  E Q+ G+ RQDLISSLQ L DYE LLT P P+ SVANQAAAKA+M++SG+TVGNGY
Sbjct: 316 NQIKEKQSPGRCRQDLISSLQMLGDYEALLTPPQPVRSVANQAAAKAIMFVSGLTVGNGY 375

Query: 59  FDGVSLNDMPINCSGNLRH 3
           ++ +S+NDMP+NCSGN+RH
Sbjct: 376 YECMSINDMPMNCSGNMRH 394


>KHG10948.1 Tryptase [Gossypium arboreum]
          Length = 1264

 Score =  176 bits (445), Expect = 2e-48
 Identities = 84/139 (60%), Positives = 109/139 (78%)
 Frame = -2

Query: 419 GKWLPQVLQKLLQERDSNEGPEPRLDTCLCLLLSITPIAILNLIEDEESPQMDEVDKNPL 240
           G W+   L+ + +ERD +EGP PRLDTCLC+LLSITP+ + N++E+EES  +D  D +P 
Sbjct: 309 GLWIA-ALRLVQRERDISEGPVPRLDTCLCMLLSITPLVVANIVEEEESELIDGSDCSPT 367

Query: 239 GQKSENQTVGKRRQDLISSLQQLDDYEILLTSPLPLSSVANQAAAKAMMYLSGITVGNGY 60
            Q  E Q  G+ RQDLISSLQ L DYE LLT P P+ SVANQAAAKA+M++SG+TVGNGY
Sbjct: 368 NQIKEKQATGRCRQDLISSLQMLGDYEALLTPPQPVRSVANQAAAKAIMFVSGLTVGNGY 427

Query: 59  FDGVSLNDMPINCSGNLRH 3
           ++ +S+NDMP+NCSGN+RH
Sbjct: 428 YECMSINDMPMNCSGNMRH 446


>XP_016709518.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           33B-like isoform X3 [Gossypium hirsutum]
          Length = 1274

 Score =  176 bits (445), Expect = 2e-48
 Identities = 84/139 (60%), Positives = 109/139 (78%)
 Frame = -2

Query: 419 GKWLPQVLQKLLQERDSNEGPEPRLDTCLCLLLSITPIAILNLIEDEESPQMDEVDKNPL 240
           G W+   L+ + +ERD +EGP PRLDTCLC+LLSITP+ + N++E+EES  +D  D +P 
Sbjct: 373 GLWIA-ALRLVQRERDISEGPVPRLDTCLCMLLSITPLVVANIVEEEESELIDGSDCSPT 431

Query: 239 GQKSENQTVGKRRQDLISSLQQLDDYEILLTSPLPLSSVANQAAAKAMMYLSGITVGNGY 60
            Q  E Q  G+ RQDLISSLQ L DYE LLT P P+ SVANQAAAKA+M++SG+TVGNGY
Sbjct: 432 NQIKEKQATGRCRQDLISSLQMLGDYEALLTPPQPVRSVANQAAAKAIMFVSGLTVGNGY 491

Query: 59  FDGVSLNDMPINCSGNLRH 3
           ++ +S+NDMP+NCSGN+RH
Sbjct: 492 YECMSINDMPMNCSGNMRH 510


>XP_016709517.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           33B-like isoform X2 [Gossypium hirsutum]
          Length = 1291

 Score =  176 bits (445), Expect = 2e-48
 Identities = 84/139 (60%), Positives = 109/139 (78%)
 Frame = -2

Query: 419 GKWLPQVLQKLLQERDSNEGPEPRLDTCLCLLLSITPIAILNLIEDEESPQMDEVDKNPL 240
           G W+   L+ + +ERD +EGP PRLDTCLC+LLSITP+ + N++E+EES  +D  D +P 
Sbjct: 336 GLWIA-ALRLVQRERDISEGPVPRLDTCLCMLLSITPLVVANIVEEEESELIDGSDCSPT 394

Query: 239 GQKSENQTVGKRRQDLISSLQQLDDYEILLTSPLPLSSVANQAAAKAMMYLSGITVGNGY 60
            Q  E Q  G+ RQDLISSLQ L DYE LLT P P+ SVANQAAAKA+M++SG+TVGNGY
Sbjct: 395 NQIKEKQATGRCRQDLISSLQMLGDYEALLTPPQPVRSVANQAAAKAIMFVSGLTVGNGY 454

Query: 59  FDGVSLNDMPINCSGNLRH 3
           ++ +S+NDMP+NCSGN+RH
Sbjct: 455 YECMSINDMPMNCSGNMRH 473


>XP_017630337.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           33B-like [Gossypium arboreum]
          Length = 1328

 Score =  176 bits (445), Expect = 2e-48
 Identities = 84/139 (60%), Positives = 109/139 (78%)
 Frame = -2

Query: 419 GKWLPQVLQKLLQERDSNEGPEPRLDTCLCLLLSITPIAILNLIEDEESPQMDEVDKNPL 240
           G W+   L+ + +ERD +EGP PRLDTCLC+LLSITP+ + N++E+EES  +D  D +P 
Sbjct: 373 GLWIA-ALRLVQRERDISEGPVPRLDTCLCMLLSITPLVVANIVEEEESELIDGSDCSPT 431

Query: 239 GQKSENQTVGKRRQDLISSLQQLDDYEILLTSPLPLSSVANQAAAKAMMYLSGITVGNGY 60
            Q  E Q  G+ RQDLISSLQ L DYE LLT P P+ SVANQAAAKA+M++SG+TVGNGY
Sbjct: 432 NQIKEKQATGRCRQDLISSLQMLGDYEALLTPPQPVRSVANQAAAKAIMFVSGLTVGNGY 491

Query: 59  FDGVSLNDMPINCSGNLRH 3
           ++ +S+NDMP+NCSGN+RH
Sbjct: 492 YECMSINDMPMNCSGNMRH 510


>XP_016709516.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           33B-like isoform X1 [Gossypium hirsutum]
          Length = 1328

 Score =  176 bits (445), Expect = 2e-48
 Identities = 84/139 (60%), Positives = 109/139 (78%)
 Frame = -2

Query: 419 GKWLPQVLQKLLQERDSNEGPEPRLDTCLCLLLSITPIAILNLIEDEESPQMDEVDKNPL 240
           G W+   L+ + +ERD +EGP PRLDTCLC+LLSITP+ + N++E+EES  +D  D +P 
Sbjct: 373 GLWIA-ALRLVQRERDISEGPVPRLDTCLCMLLSITPLVVANIVEEEESELIDGSDCSPT 431

Query: 239 GQKSENQTVGKRRQDLISSLQQLDDYEILLTSPLPLSSVANQAAAKAMMYLSGITVGNGY 60
            Q  E Q  G+ RQDLISSLQ L DYE LLT P P+ SVANQAAAKA+M++SG+TVGNGY
Sbjct: 432 NQIKEKQATGRCRQDLISSLQMLGDYEALLTPPQPVRSVANQAAAKAIMFVSGLTVGNGY 491

Query: 59  FDGVSLNDMPINCSGNLRH 3
           ++ +S+NDMP+NCSGN+RH
Sbjct: 492 YECMSINDMPMNCSGNMRH 510


>XP_016696072.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           33B-like isoform X1 [Gossypium hirsutum]
          Length = 1328

 Score =  176 bits (445), Expect = 2e-48
 Identities = 84/139 (60%), Positives = 110/139 (79%)
 Frame = -2

Query: 419 GKWLPQVLQKLLQERDSNEGPEPRLDTCLCLLLSITPIAILNLIEDEESPQMDEVDKNPL 240
           G W+   L+ + +ERD +EGP PRLDTCLC+LLSITP+ + N++E+EES  +D  D +P 
Sbjct: 373 GLWIA-ALRLVQRERDISEGPVPRLDTCLCMLLSITPLVVANIVEEEESELIDGCDCSPT 431

Query: 239 GQKSENQTVGKRRQDLISSLQQLDDYEILLTSPLPLSSVANQAAAKAMMYLSGITVGNGY 60
            Q  E Q+ G+ RQDLISSLQ L DYE LLT P P+ SVANQAAAKA+M++SG+TVGNGY
Sbjct: 432 NQIKEKQSPGRCRQDLISSLQMLGDYEALLTPPQPVRSVANQAAAKAIMFVSGLTVGNGY 491

Query: 59  FDGVSLNDMPINCSGNLRH 3
           ++ +S+NDMP+NCSGN+RH
Sbjct: 492 YECMSINDMPMNCSGNMRH 510


>OMP04999.1 hypothetical protein COLO4_09143 [Corchorus olitorius]
          Length = 1324

 Score =  175 bits (444), Expect = 3e-48
 Identities = 83/139 (59%), Positives = 110/139 (79%)
 Frame = -2

Query: 419 GKWLPQVLQKLLQERDSNEGPEPRLDTCLCLLLSITPIAILNLIEDEESPQMDEVDKNPL 240
           G W+   L+ + +ERD +EGP PRLDTCLC+LLSITP+A+ N++E+EES  +DE D +P 
Sbjct: 372 GLWIA-ALRLVQRERDISEGPVPRLDTCLCMLLSITPLAVANVVEEEESELIDENDCSPT 430

Query: 239 GQKSENQTVGKRRQDLISSLQQLDDYEILLTSPLPLSSVANQAAAKAMMYLSGITVGNGY 60
            Q  E Q  G+RR+DLISSLQ L DYE LL  P  + +VANQAAAKA+M++SG+TVGNGY
Sbjct: 431 DQTKEKQPQGRRRKDLISSLQMLSDYEALLIPPQSVRTVANQAAAKAIMFISGLTVGNGY 490

Query: 59  FDGVSLNDMPINCSGNLRH 3
           ++ +S+NDMP+NCSGN+RH
Sbjct: 491 YESMSINDMPMNCSGNMRH 509


>CDP03599.1 unnamed protein product [Coffea canephora]
          Length = 1335

 Score =  175 bits (444), Expect = 3e-48
 Identities = 88/139 (63%), Positives = 113/139 (81%)
 Frame = -2

Query: 419 GKWLPQVLQKLLQERDSNEGPEPRLDTCLCLLLSITPIAILNLIEDEESPQMDEVDKNPL 240
           G W+   L+ + +ERDS+E P PR+DTCLCLLLSITP+AI+N+IE+EES    E   +  
Sbjct: 380 GLWIA-ALRLVQRERDSSEAPVPRIDTCLCLLLSITPLAIVNIIEEEESSGGSE-SCHLT 437

Query: 239 GQKSENQTVGKRRQDLISSLQQLDDYEILLTSPLPLSSVANQAAAKAMMYLSGITVGNGY 60
           G + E  +VGKRR+DL++SLQQL+DYE LLT PL +SS+ANQAAAKAMM+LSG++VG+GY
Sbjct: 438 GPRKEKHSVGKRRKDLVASLQQLEDYEGLLTPPLSVSSLANQAAAKAMMFLSGLSVGSGY 497

Query: 59  FDGVSLNDMPINCSGNLRH 3
           FDG+SLNDMP+ CSGNL H
Sbjct: 498 FDGISLNDMPMGCSGNLLH 516


>EOX94837.1 REF4-related 1, putative isoform 2 [Theobroma cacao]
          Length = 967

 Score =  174 bits (442), Expect = 5e-48
 Identities = 83/139 (59%), Positives = 109/139 (78%)
 Frame = -2

Query: 419 GKWLPQVLQKLLQERDSNEGPEPRLDTCLCLLLSITPIAILNLIEDEESPQMDEVDKNPL 240
           G W+   L+ + +ERD +EGP PRLDTCLC+LLSITP+ + N++E+EES  +DE D +P 
Sbjct: 373 GLWIA-ALRLVQRERDISEGPVPRLDTCLCMLLSITPLVVANIVEEEESELIDESDCSPT 431

Query: 239 GQKSENQTVGKRRQDLISSLQQLDDYEILLTSPLPLSSVANQAAAKAMMYLSGITVGNGY 60
            Q  E Q  G+ R+DLISSLQ L DYE LLT P  + SVANQAAAKA+M++SG+TVGNGY
Sbjct: 432 NQTKEKQAPGRCRKDLISSLQMLSDYEALLTPPQSVRSVANQAAAKAIMFISGLTVGNGY 491

Query: 59  FDGVSLNDMPINCSGNLRH 3
           ++ +S+NDMP+NCSGN+RH
Sbjct: 492 YECMSINDMPMNCSGNMRH 510


>XP_007050680.2 PREDICTED: mediator of RNA polymerase II transcription subunit 33B
           [Theobroma cacao]
          Length = 1328

 Score =  174 bits (442), Expect = 6e-48
 Identities = 83/139 (59%), Positives = 109/139 (78%)
 Frame = -2

Query: 419 GKWLPQVLQKLLQERDSNEGPEPRLDTCLCLLLSITPIAILNLIEDEESPQMDEVDKNPL 240
           G W+   L+ + +ERD +EGP PRLDTCLC+LLSITP+ + N++E+EES  +DE D +P 
Sbjct: 373 GLWIA-ALRLVQRERDISEGPVPRLDTCLCMLLSITPLVVANIVEEEESELIDESDCSPT 431

Query: 239 GQKSENQTVGKRRQDLISSLQQLDDYEILLTSPLPLSSVANQAAAKAMMYLSGITVGNGY 60
            Q  E Q  G+ R+DLISSLQ L DYE LLT P  + SVANQAAAKA+M++SG+TVGNGY
Sbjct: 432 NQTKEKQAPGRCRKDLISSLQMLSDYEALLTPPQSVRSVANQAAAKAIMFISGLTVGNGY 491

Query: 59  FDGVSLNDMPINCSGNLRH 3
           ++ +S+NDMP+NCSGN+RH
Sbjct: 492 YECMSINDMPMNCSGNMRH 510


>EOX94836.1 Reduced epidermal fluorescence 4, putative isoform 1 [Theobroma
           cacao]
          Length = 1334

 Score =  174 bits (442), Expect = 6e-48
 Identities = 83/139 (59%), Positives = 109/139 (78%)
 Frame = -2

Query: 419 GKWLPQVLQKLLQERDSNEGPEPRLDTCLCLLLSITPIAILNLIEDEESPQMDEVDKNPL 240
           G W+   L+ + +ERD +EGP PRLDTCLC+LLSITP+ + N++E+EES  +DE D +P 
Sbjct: 379 GLWIA-ALRLVQRERDISEGPVPRLDTCLCMLLSITPLVVANIVEEEESELIDESDCSPT 437

Query: 239 GQKSENQTVGKRRQDLISSLQQLDDYEILLTSPLPLSSVANQAAAKAMMYLSGITVGNGY 60
            Q  E Q  G+ R+DLISSLQ L DYE LLT P  + SVANQAAAKA+M++SG+TVGNGY
Sbjct: 438 NQTKEKQAPGRCRKDLISSLQMLSDYEALLTPPQSVRSVANQAAAKAIMFISGLTVGNGY 497

Query: 59  FDGVSLNDMPINCSGNLRH 3
           ++ +S+NDMP+NCSGN+RH
Sbjct: 498 YECMSINDMPMNCSGNMRH 516


>OMO77792.1 hypothetical protein CCACVL1_14830 [Corchorus capsularis]
          Length = 1324

 Score =  172 bits (437), Expect = 3e-47
 Identities = 82/139 (58%), Positives = 109/139 (78%)
 Frame = -2

Query: 419 GKWLPQVLQKLLQERDSNEGPEPRLDTCLCLLLSITPIAILNLIEDEESPQMDEVDKNPL 240
           G W+   L+ + +ERD +EGP PRLDTCLC+LLSITP+A+ N++E+EES  +DE D +  
Sbjct: 372 GLWIA-ALRLVQRERDISEGPVPRLDTCLCMLLSITPLAVANIVEEEESELIDENDCSTT 430

Query: 239 GQKSENQTVGKRRQDLISSLQQLDDYEILLTSPLPLSSVANQAAAKAMMYLSGITVGNGY 60
            Q  E Q  G+RR+DLISSLQ L DYE LL  P  + +VANQAAAKA+M++SG+TVGNGY
Sbjct: 431 NQTKEKQPQGRRRKDLISSLQMLSDYEALLIPPQSVRTVANQAAAKAIMFVSGLTVGNGY 490

Query: 59  FDGVSLNDMPINCSGNLRH 3
           ++ +S+NDMP+NCSGN+RH
Sbjct: 491 YESMSINDMPMNCSGNMRH 509


>XP_012490520.1 PREDICTED: mediator of RNA polymerase II transcription subunit 33B
           isoform X3 [Gossypium raimondii]
          Length = 1212

 Score =  172 bits (436), Expect = 4e-47
 Identities = 83/139 (59%), Positives = 108/139 (77%)
 Frame = -2

Query: 419 GKWLPQVLQKLLQERDSNEGPEPRLDTCLCLLLSITPIAILNLIEDEESPQMDEVDKNPL 240
           G W+   L+ + +ERD +EGP PRLDTCLC+LLSITP+ + N++E+EES  +D  D +P 
Sbjct: 257 GLWIA-ALRLVQRERDISEGPVPRLDTCLCMLLSITPLVVANIVEEEESELIDGCDCSPT 315

Query: 239 GQKSENQTVGKRRQDLISSLQQLDDYEILLTSPLPLSSVANQAAAKAMMYLSGITVGNGY 60
            Q  E Q+ G+ RQDLI SLQ L DYE LLT P P+ SVANQAAAKA+M++SG+TVGNGY
Sbjct: 316 NQIKEKQSPGRCRQDLICSLQMLGDYEALLTPPQPVRSVANQAAAKAIMFVSGLTVGNGY 375

Query: 59  FDGVSLNDMPINCSGNLRH 3
            + +S+NDMP+NCSGN+RH
Sbjct: 376 HECMSINDMPMNCSGNMRH 394


>XP_012490519.1 PREDICTED: mediator of RNA polymerase II transcription subunit 33B
           isoform X2 [Gossypium raimondii]
          Length = 1291

 Score =  172 bits (436), Expect = 4e-47
 Identities = 83/139 (59%), Positives = 108/139 (77%)
 Frame = -2

Query: 419 GKWLPQVLQKLLQERDSNEGPEPRLDTCLCLLLSITPIAILNLIEDEESPQMDEVDKNPL 240
           G W+   L+ + +ERD +EGP PRLDTCLC+LLSITP+ + N++E+EES  +D  D +P 
Sbjct: 336 GLWIA-ALRLVQRERDISEGPVPRLDTCLCMLLSITPLVVANIVEEEESELIDGCDCSPT 394

Query: 239 GQKSENQTVGKRRQDLISSLQQLDDYEILLTSPLPLSSVANQAAAKAMMYLSGITVGNGY 60
            Q  E Q+ G+ RQDLI SLQ L DYE LLT P P+ SVANQAAAKA+M++SG+TVGNGY
Sbjct: 395 NQIKEKQSPGRCRQDLICSLQMLGDYEALLTPPQPVRSVANQAAAKAIMFVSGLTVGNGY 454

Query: 59  FDGVSLNDMPINCSGNLRH 3
            + +S+NDMP+NCSGN+RH
Sbjct: 455 HECMSINDMPMNCSGNMRH 473


>XP_012490518.1 PREDICTED: mediator of RNA polymerase II transcription subunit 33B
           isoform X1 [Gossypium raimondii] KJB42055.1 hypothetical
           protein B456_007G134500 [Gossypium raimondii]
          Length = 1328

 Score =  172 bits (436), Expect = 4e-47
 Identities = 83/139 (59%), Positives = 108/139 (77%)
 Frame = -2

Query: 419 GKWLPQVLQKLLQERDSNEGPEPRLDTCLCLLLSITPIAILNLIEDEESPQMDEVDKNPL 240
           G W+   L+ + +ERD +EGP PRLDTCLC+LLSITP+ + N++E+EES  +D  D +P 
Sbjct: 373 GLWIA-ALRLVQRERDISEGPVPRLDTCLCMLLSITPLVVANIVEEEESELIDGCDCSPT 431

Query: 239 GQKSENQTVGKRRQDLISSLQQLDDYEILLTSPLPLSSVANQAAAKAMMYLSGITVGNGY 60
            Q  E Q+ G+ RQDLI SLQ L DYE LLT P P+ SVANQAAAKA+M++SG+TVGNGY
Sbjct: 432 NQIKEKQSPGRCRQDLICSLQMLGDYEALLTPPQPVRSVANQAAAKAIMFVSGLTVGNGY 491

Query: 59  FDGVSLNDMPINCSGNLRH 3
            + +S+NDMP+NCSGN+RH
Sbjct: 492 HECMSINDMPMNCSGNMRH 510