BLASTX nr result

ID: Lithospermum23_contig00016402 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00016402
         (650 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YP_009121970.1 ATPase subunit 6 (mitochondrion) [Hyoscyamus nige...    59   8e-09
YP_008992278.1 hypothetical protein Salmi_Mp012 (mitochondrion) ...    55   2e-06

>YP_009121970.1 ATPase subunit 6 (mitochondrion) [Hyoscyamus niger] AJK91366.1
           ATPase subunit 6 (mitochondrion) [Hyoscyamus niger]
          Length = 395

 Score = 58.9 bits (141), Expect(2) = 8e-09
 Identities = 30/53 (56%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
 Frame = +1

Query: 304 VLEGRPV----PPEEAWNAVDSPFYCSRAVHIPGEIEDPLTLSRLSKLNGFLM 450
           VL+G PV    P  + W+ V SPFY S  VHIPGEIEDPLT+ +LS  N FL+
Sbjct: 15  VLQGIPVQDIFPDIDIWDIVSSPFYFSGTVHIPGEIEDPLTIVKLSDFNKFLV 67



 Score = 28.9 bits (63), Expect(2) = 8e-09
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +3

Query: 471 GGVMQAKNVRTIQQELDHTDANALPAKLESINSIIRMEYTRW 596
           GGV+Q    +++Q+ELD T    L AKL+    +   EY  W
Sbjct: 75  GGVIQPAYTQSLQRELDVTSEELLAAKLD---FMFNREYGFW 113


>YP_008992278.1 hypothetical protein Salmi_Mp012 (mitochondrion) [Salvia
           miltiorrhiza] AGU16547.1 hypothetical protein
           Salmi_Mp012 (mitochondrion) [Salvia miltiorrhiza]
          Length = 192

 Score = 54.7 bits (130), Expect(2) = 2e-06
 Identities = 28/58 (48%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
 Frame = +1

Query: 283 TERKPPVVLEGRPVPPE--EAWNAVDSPFYCSRAVHIPGEIEDPLTLSRLSKLNGFLM 450
           T   P  +L+G P+     E  +AV SPFY +  VHIPGEIE+PLT+ +L++LN FL+
Sbjct: 16  TSSSPSEILQGIPIQNLGIEESDAVSSPFYFAGVVHIPGEIENPLTVEKLTQLNHFLV 73



 Score = 24.6 bits (52), Expect(2) = 2e-06
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 477 VMQAKNVRTIQQELDHTDANALPAKLE 557
           ++Q+   + +Q ELD T A  L AKL+
Sbjct: 83  IIQSSYTKFLQCELDQTPAELLSAKLD 109


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