BLASTX nr result

ID: Lithospermum23_contig00014985 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00014985
         (1082 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_004231801.1 PREDICTED: F-box protein SKIP14 [Solanum lycopers...    64   1e-07
XP_006338669.1 PREDICTED: F-box protein SKIP14 [Solanum tuberosum]     64   1e-07
XP_015067016.1 PREDICTED: F-box protein SKIP14 [Solanum pennellii]     64   2e-07
XP_009609002.1 PREDICTED: F-box protein SKIP14-like [Nicotiana t...    59   4e-06

>XP_004231801.1 PREDICTED: F-box protein SKIP14 [Solanum lycopersicum]
          Length = 489

 Score = 64.3 bits (155), Expect = 1e-07
 Identities = 43/130 (33%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
 Frame = +3

Query: 663  MALNQKENLCSRIRLDDGYMREDCSDKNIDGFRSVRGFNWGMTNNID----HKRETSESV 830
            M+LN++E + +  +LD+ Y  ++  ++ +D F    G  WG+   ID    HK E  E V
Sbjct: 1    MSLNREERILAGTKLDNSYFDKEYPNEKLDRF----GDFWGLKREIDKVHDHKSEKIEMV 56

Query: 831  VDNVVDLLPKDPFNFRSIRAFNWEMGNSIDHKSEKSESVVDNVVDLLPKDPFNFR-SFRA 1007
             D++ D               N E G+  DHK E S+   D++VDLLP+DPF+   S + 
Sbjct: 57   SDDISDFWD-----------LNCEKGSFPDHKDENSKMGSDDIVDLLPQDPFDMDISTKI 105

Query: 1008 FNWEMGNNID 1037
              W  G N D
Sbjct: 106  TGWLEGINKD 115


>XP_006338669.1 PREDICTED: F-box protein SKIP14 [Solanum tuberosum]
          Length = 491

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
 Frame = +3

Query: 663  MALNQKENLCSRIRLDDGYMREDCSDKNIDGFRSVRGFNWGMTNNIDHKRETSESVVDNV 842
            M+LN++E   +  +LD+ Y  ++  ++ +D F    G N  +    DHK   +E V D++
Sbjct: 3    MSLNREEGFLAGTKLDNNYFDKEYPNEKLDRFGDFWGLNREIDKFHDHKSGKTEMVSDDI 62

Query: 843  VDLLPKDPFNFRSIRAFNWEMGNSIDHKSEKSESVVDNVVDLLPKDPFNFR-SFRAFNWE 1019
             D               N E GN  DHK E ++   D++VDLLP+DPF+   S +   W 
Sbjct: 63   SDFWE-----------LNCEKGNFQDHKDENTKMGSDDIVDLLPQDPFDMDISTKITGWL 111

Query: 1020 MGNNID 1037
             G N D
Sbjct: 112  EGINKD 117


>XP_015067016.1 PREDICTED: F-box protein SKIP14 [Solanum pennellii]
          Length = 489

 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
 Frame = +3

Query: 663  MALNQKENLCSRIRLDDGYMREDCSDKNIDGFRSVRGFNWGMTNNID----HKRETSESV 830
            M+LN++E   +  +LD+ Y  ++  ++ +D F    G  WG+   ID    HK   +E +
Sbjct: 1    MSLNREERFLAGTKLDNSYFDKEYPNEKLDRF----GDFWGLKREIDKVQDHKSGKTEMI 56

Query: 831  VDNVVDLLPKDPFNFRSIRAFNWEMGNSIDHKSEKSESVVDNVVDLLPKDPFNFR-SFRA 1007
             D++ D               N E GN  DHK E S+   D++VDLLP+DPF+   S + 
Sbjct: 57   SDDISDFWD-----------LNCEKGNFPDHKDENSKMGSDDIVDLLPQDPFDMDISTKI 105

Query: 1008 FNWEMGNNID 1037
              W  G N D
Sbjct: 106  TGWLEGINKD 115


>XP_009609002.1 PREDICTED: F-box protein SKIP14-like [Nicotiana tomentosiformis]
           XP_016450517.1 PREDICTED: F-box protein SKIP14-like
           [Nicotiana tabacum]
          Length = 473

 Score = 59.3 bits (142), Expect = 4e-06
 Identities = 30/70 (42%), Positives = 39/70 (55%)
 Frame = +3

Query: 663 MALNQKENLCSRIRLDDGYMREDCSDKNIDGFRSVRGFNWGMTNNIDHKRETSESVVDNV 842
           MALNQ+E   +RI  D+G   E C +  +DGF    G N  M    D+K   +    DN+
Sbjct: 1   MALNQEEGYLTRIGFDNGCSVERCLNDKVDGFSDFWGLNCEMGELYDYKGGKANKGSDNI 60

Query: 843 VDLLPKDPFN 872
            DLLP+DPFN
Sbjct: 61  ADLLPQDPFN 70


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