BLASTX nr result
ID: Lithospermum23_contig00014823
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00014823
(492 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_006346135.1 PREDICTED: cleavage and polyadenylation specifici... 80 2e-14
XP_015082205.1 PREDICTED: cleavage and polyadenylation specifici... 79 4e-14
XP_004244046.1 PREDICTED: cleavage and polyadenylation specifici... 79 6e-14
XP_004244045.1 PREDICTED: cleavage and polyadenylation specifici... 79 6e-14
XP_011095808.1 PREDICTED: LOW QUALITY PROTEIN: cleavage and poly... 65 2e-09
KVI02331.1 Nucleotide-binding, alpha-beta plait [Cynara carduncu... 60 1e-07
XP_003532176.1 PREDICTED: cleavage and polyadenylation specifici... 56 4e-06
EYU27436.1 hypothetical protein MIMGU_mgv1a002411mg [Erythranthe... 55 6e-06
XP_018825236.1 PREDICTED: cleavage and polyadenylation specifici... 55 8e-06
XP_012848866.1 PREDICTED: cleavage and polyadenylation specifici... 55 8e-06
>XP_006346135.1 PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Solanum tuberosum] XP_006346136.1 PREDICTED: cleavage
and polyadenylation specificity factor subunit 6
[Solanum tuberosum] XP_015163650.1 PREDICTED: cleavage
and polyadenylation specificity factor subunit 6
[Solanum tuberosum] XP_015163651.1 PREDICTED: cleavage
and polyadenylation specificity factor subunit 6
[Solanum tuberosum]
Length = 695
Score = 80.1 bits (196), Expect = 2e-14
Identities = 54/158 (34%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Frame = +3
Query: 3 NVGENVLQSLRKNEELLAQTQAMEKTGEIMRTPAPPVSGVQQPIXXXXXXXXXXXXVGSR 182
NVGEN LQS RKNE+L+++ +E+ E PAPP + G R
Sbjct: 48 NVGENFLQSFRKNEDLVSRNDEVERKPEQPALPAPPPVVAAPQVVDESGRGDFQGVGGER 107
Query: 183 DTARNE--VEGFQVNLANRXXXXXXXXXXXXLRVELGQPSNRIGNVEEQIVGNNGQNLRS 356
+ + E V G A+ RVEL PS+++G++ E++V +N +
Sbjct: 108 NPVKEEDVVSGISAR-ASVGAAVSGPSAGGGFRVELSHPSSKMGDLAERMVNSNVPHQVM 166
Query: 357 GPLNHASNV----GNAGNLGNMGNDAIMRPVGWNMNDV 458
HA V GN GN+GNMGND ++R G NMN V
Sbjct: 167 AQQPHAGGVAVAAGNLGNVGNMGNDNLIRQGGVNMNGV 204
>XP_015082205.1 PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Solanum pennellii] XP_015082206.1 PREDICTED: cleavage
and polyadenylation specificity factor subunit 6
[Solanum pennellii] XP_015082207.1 PREDICTED: cleavage
and polyadenylation specificity factor subunit 6
[Solanum pennellii]
Length = 698
Score = 79.0 bits (193), Expect = 4e-14
Identities = 53/156 (33%), Positives = 75/156 (48%), Gaps = 6/156 (3%)
Frame = +3
Query: 3 NVGENVLQSLRKNEELLAQTQAMEKTGEIMRTPAPPVSGVQQPIXXXXXXXXXXXXVGSR 182
NVGEN LQS RKNE+L+++ + +E+ E PAPP + G R
Sbjct: 48 NVGENFLQSFRKNEDLVSRNEEVERKPEQPVLPAPPPVVAAPQVVDESGRDDFQGVGGER 107
Query: 183 DTARNE--VEGFQVNLANRXXXXXXXXXXXXLRVELGQPSNRIGNVEEQIVGNNGQNLRS 356
+ + E V G A+ RVEL PS+++G++ E++V +N N
Sbjct: 108 NPVKEEDVVSGIAAR-ASVGPAVSGTSAGSGFRVELSHPSSKMGDLAERMVNSNVPNQVM 166
Query: 357 GPLNHASNV----GNAGNLGNMGNDAIMRPVGWNMN 452
H V GN GN+GNMGND ++R G NMN
Sbjct: 167 AQQPHGGGVAVATGNLGNVGNMGNDNLIRQGGVNMN 202
>XP_004244046.1 PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Solanum lycopersicum] XP_010324264.1 PREDICTED:
cleavage and polyadenylation specificity factor subunit
6-like [Solanum lycopersicum] XP_010324265.1 PREDICTED:
cleavage and polyadenylation specificity factor subunit
6-like [Solanum lycopersicum]
Length = 695
Score = 78.6 bits (192), Expect = 6e-14
Identities = 53/156 (33%), Positives = 75/156 (48%), Gaps = 6/156 (3%)
Frame = +3
Query: 3 NVGENVLQSLRKNEELLAQTQAMEKTGEIMRTPAPPVSGVQQPIXXXXXXXXXXXXVGSR 182
NVGEN LQS RKNE+L+++ + +E+ E PAPP + G R
Sbjct: 48 NVGENFLQSFRKNEDLVSRNEEVERKPEQPVLPAPPPVVAALQVVDESGRDDFQGVGGER 107
Query: 183 DTARNE--VEGFQVNLANRXXXXXXXXXXXXLRVELGQPSNRIGNVEEQIVGNNGQNLRS 356
+ + E V G A+ RVEL PS+++G++ E++V +N N
Sbjct: 108 NPVKEEDVVSGIAAR-ASVGPAVSGTSAGSGFRVELSHPSSKMGDLAERMVNSNVPNQVM 166
Query: 357 GPLNHASNV----GNAGNLGNMGNDAIMRPVGWNMN 452
H V GN GN+GNMGND ++R G NMN
Sbjct: 167 AQQPHGGGVAVAAGNLGNVGNMGNDNLIRQGGVNMN 202
>XP_004244045.1 PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Solanum lycopersicum] XP_010324266.1 PREDICTED:
cleavage and polyadenylation specificity factor subunit
6 [Solanum lycopersicum] XP_010324267.1 PREDICTED:
cleavage and polyadenylation specificity factor subunit
6 [Solanum lycopersicum]
Length = 697
Score = 78.6 bits (192), Expect = 6e-14
Identities = 53/156 (33%), Positives = 75/156 (48%), Gaps = 6/156 (3%)
Frame = +3
Query: 3 NVGENVLQSLRKNEELLAQTQAMEKTGEIMRTPAPPVSGVQQPIXXXXXXXXXXXXVGSR 182
NVGEN LQS RKNE+L+++ + +E+ E PAPP + G R
Sbjct: 48 NVGENFLQSFRKNEDLVSRNEEVERKPEQPVLPAPPPVVAALQVVDESGRDDFQGVGGER 107
Query: 183 DTARNE--VEGFQVNLANRXXXXXXXXXXXXLRVELGQPSNRIGNVEEQIVGNNGQNLRS 356
+ + E V G A+ RVEL PS+++G++ E++V +N N
Sbjct: 108 NPVKEEDVVSGIAAR-ASVGPAVSGTSAGSGFRVELSHPSSKMGDLAERMVNSNVPNQVM 166
Query: 357 GPLNHASNV----GNAGNLGNMGNDAIMRPVGWNMN 452
H V GN GN+GNMGND ++R G NMN
Sbjct: 167 AQQPHGGGVAVAAGNLGNVGNMGNDNLIRQGGVNMN 202
>XP_011095808.1 PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 6 [Sesamum indicum]
Length = 719
Score = 65.5 bits (158), Expect = 2e-09
Identities = 51/158 (32%), Positives = 68/158 (43%), Gaps = 19/158 (12%)
Frame = +3
Query: 3 NVGENVLQSLRKNEELLAQTQAMEKTGEIMRTPAPPVSGVQQPIXXXXXXXXXXXXVGSR 182
NVGEN LQSLR+NE+ L Q + + P PP QQP+ SR
Sbjct: 50 NVGENFLQSLRRNEDNLGQRNEEVQENKAKLNPPPPPPSQQQPVVESGGVAFQDEGASSR 109
Query: 183 DTARNEVEGFQ----------VNLANRXXXXXXXXXXXXLRVELGQPSNRIGNVEEQIVG 332
R VEG+Q +L RVELGQ SN++ ++E++ V
Sbjct: 110 VPGR--VEGYQNVGFRGNNNANDLGVGRGAGTPGSGGNGFRVELGQSSNKVPDLEDRTVS 167
Query: 333 N---NGQNLRSGPLNHASNVGN------AGNLGNMGND 419
N N Q + HA+N+GN AGNL G +
Sbjct: 168 NSVPNNQQMVHHQQPHAANIGNLENARIAGNLNGTGGN 205
>KVI02331.1 Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
scolymus]
Length = 727
Score = 60.5 bits (145), Expect = 1e-07
Identities = 52/162 (32%), Positives = 70/162 (43%), Gaps = 8/162 (4%)
Frame = +3
Query: 3 NVGENVLQSLRKNEELLAQTQAMEKTGEIMRTPAPPVSGVQQPIXXXXXXXXXXXXVGSR 182
NVGE LQSLRKNE+L + + E+ + P P Q + S
Sbjct: 46 NVGEGFLQSLRKNEDLGFKNE--EEVEKNKSEPVPQPVQHPQAVDDGAVGGGGESKFESN 103
Query: 183 DTARNEVE-----GFQVNLANRXXXXXXXXXXXXLRVELGQPSNRIGNVEEQIVGNNGQ- 344
D + VE G VN LRVELGQ ++G VE + V NNG
Sbjct: 104 DGVSSRVEANSNVGLGVN--EMGGMGSGGPVGGGLRVELGQSLAKVGEVESRTVSNNGMP 161
Query: 345 NLRSGPL--NHASNVGNAGNLGNMGNDAIMRPVGWNMNDVSG 464
N+ G +H VG+ GN+G++GN VG +V+G
Sbjct: 162 NIGMGQQQPHHVGTVGSTGNMGSLGNAGGDSLVGQGSGNVNG 203
>XP_003532176.1 PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like [Glycine max] KRH46372.1 hypothetical
protein GLYMA_08G329500 [Glycine max]
Length = 693
Score = 55.8 bits (133), Expect = 4e-06
Identities = 46/135 (34%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Frame = +3
Query: 3 NVGENVLQSLRKNEELLAQTQAMEKTGEIMRTPAPPVSGVQQPIXXXXXXXXXXXXVGSR 182
NVGE LQSLRKNE+ + +E + + PV GV P V R
Sbjct: 43 NVGEGFLQSLRKNEDSGFRNDVVEDKKPLQQPDQDPVVGVSIP---GVGGGGGSGVVEGR 99
Query: 183 DTARNEVEGFQVNLANRXXXXXXXXXXXXLRVELGQPSNRIGNVEEQIVGNNGQNLRS-G 359
V+G Q N R L+VELGQPS ++ +EEQ GN+G +++ G
Sbjct: 100 --VSGNVDGLQ-NQGFRGGNSGGGGGSGGLKVELGQPSGKLSEIEEQ-GGNDGTDVQGIG 155
Query: 360 PLNHASNVGNAGNLG 404
H VG+ GN G
Sbjct: 156 QQPHGGVVGSVGNEG 170
>EYU27436.1 hypothetical protein MIMGU_mgv1a002411mg [Erythranthe guttata]
Length = 678
Score = 55.5 bits (132), Expect = 6e-06
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 3/141 (2%)
Frame = +3
Query: 3 NVGENVLQSLRKNEELLAQ-TQAMEKTGEIMRTPAPPVSGVQQPIXXXXXXXXXXXXVGS 179
NVGEN LQS R+NE+ Q + ++ + P PP +Q P+ S
Sbjct: 47 NVGENFLQSFRRNEDNSGQINEEVQDNKAKLTAPPPPPPPLQPPLVESGGVALPDEGPAS 106
Query: 180 RDTARNEVEGFQVNLANRXXXXXXXXXXXXLRVELGQPSNRIGNVEEQIVGNNG--QNLR 353
VEG+Q + VELGQPSN++ ++EE+ V N+ Q +
Sbjct: 107 -SRVPGRVEGYQ-----------------NMGVELGQPSNKVADLEERAVNNSVPIQQMV 148
Query: 354 SGPLNHASNVGNAGNLGNMGN 416
HA+N+G N+ ++GN
Sbjct: 149 HHQPPHAANIGVLENVRHVGN 169
>XP_018825236.1 PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Juglans regia]
Length = 707
Score = 55.1 bits (131), Expect = 8e-06
Identities = 54/165 (32%), Positives = 76/165 (46%), Gaps = 11/165 (6%)
Frame = +3
Query: 3 NVGENVLQSLRKNEELLAQTQAMEKTGEIMRTPAPPVSGVQQPIXXXXXXXXXXXXVGS- 179
NVGE LQSLRK EE+ + EK + R AP GV P GS
Sbjct: 48 NVGEGFLQSLRKGEEIGFRNDEKEKVESLPRV-APEQHGVSIPGVGEDSDGGGVRPSGSQ 106
Query: 180 --RDTARNEVEGFQVNLANRXXXXXXXXXXXXLRVELGQPS--NRIGNVEEQIVGNNGQN 347
+ N+V+G + A +RVELGQ S +++ VEEQ GNN +
Sbjct: 107 INQGVRGNDVKGTDESEAG------------GVRVELGQGSMISKMNEVEEQ-SGNNISS 153
Query: 348 LRSGPL--NHASNVGNAGNLGNMGNDAIMRPV----GWNMNDVSG 464
L + S+ G GN+G +GN+A++R G N+N ++G
Sbjct: 154 LGVQGIVGGQQSHGGAVGNVGKVGNEALVRQTSGGGGGNVNGIAG 198
>XP_012848866.1 PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Erythranthe guttata]
Length = 707
Score = 55.1 bits (131), Expect = 8e-06
Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 15/153 (9%)
Frame = +3
Query: 3 NVGENVLQSLRKNEELLAQ-TQAMEKTGEIMRTPAPPVSGVQQPIXXXXXXXXXXXXVGS 179
NVGEN LQS R+NE+ Q + ++ + P PP +Q P+ S
Sbjct: 47 NVGENFLQSFRRNEDNSGQINEEVQDNKAKLTAPPPPPPPLQPPLVESGGVALPDEGPAS 106
Query: 180 RDTARNEVEGFQ------------VNLANRXXXXXXXXXXXXLRVELGQPSNRIGNVEEQ 323
VEG+Q + + RVELGQPSN++ ++EE+
Sbjct: 107 -SRVPGRVEGYQNMGFKGNSNTIDLGVGRGAGAPVGGGTGGGFRVELGQPSNKVADLEER 165
Query: 324 IVGNNG--QNLRSGPLNHASNVGNAGNLGNMGN 416
V N+ Q + HA+N+G N+ ++GN
Sbjct: 166 AVNNSVPIQQMVHHQPPHAANIGVLENVRHVGN 198