BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00014578
         (304 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010692480.1 PREDICTED: uncharacterized protein LOC104905592 [...   134   2e-34
XP_010667912.1 PREDICTED: uncharacterized protein LOC104884908 [...   133   3e-34
KYP63606.1 Retrovirus-related Pol polyprotein from transposon TN...   109   9e-27
XP_010677195.1 PREDICTED: uncharacterized protein LOC104892872 [...   107   5e-25
BAB10743.1 retroelement pol polyprotein-like [Arabidopsis thaliana]   104   4e-24
AAG50751.1 polyprotein, putative [Arabidopsis thaliana]               104   5e-24
XP_010681247.1 PREDICTED: uncharacterized protein LOC104896228 [...   103   7e-24
CAA18107.1 LTR retrotransposon like protein [Arabidopsis thalian...   102   2e-23
KYP61781.1 Retrovirus-related Pol polyprotein from transposon TN...   102   4e-23
KYP64905.1 Retrovirus-related Pol polyprotein from transposon TN...   101   5e-23
KYP64173.1 Retrovirus-related Pol polyprotein from transposon TN...   101   5e-23
XP_010674610.1 PREDICTED: uncharacterized protein LOC104890733 [...   100   1e-22
KYP77828.1 Retrovirus-related Pol polyprotein from transposon TN...    94   6e-22
XP_010676001.1 PREDICTED: uncharacterized protein LOC104891911 [...    99   6e-22
XP_010677705.1 PREDICTED: uncharacterized protein LOC104893304 [...    99   7e-22
KYP43576.1 Retrovirus-related Pol polyprotein from transposon TN...    96   7e-22
KYP61584.1 Retrovirus-related Pol polyprotein from transposon TN...    94   1e-21
GAU34891.1 hypothetical protein TSUD_144220 [Trifolium subterran...    98   1e-21
AAD24600.1 putative retroelement pol polyprotein [Arabidopsis th...    98   1e-21
XP_010420948.1 PREDICTED: uncharacterized protein LOC104706448 [...    97   2e-21

>XP_010692480.1 PREDICTED: uncharacterized protein LOC104905592 [Beta vulgaris
           subsp. vulgaris]
          Length = 1085

 Score =  134 bits (337), Expect = 2e-34
 Identities = 62/101 (61%), Positives = 80/101 (79%), Gaps = 1/101 (0%)
 Frame = +2

Query: 2   YYLRIPAVC-AVTVSGVSEFELWHRRLGHPSDRILKLVPAIRSSSSRKQLDHACTVCPQA 178
           YY R  AV  AV V  +S F+LWH+RLGHPS+R++KL+PAI+SSS +K+L++ C VCP A
Sbjct: 503 YYFRTVAVVQAVGVPSLSLFDLWHQRLGHPSERVVKLLPAIKSSSDKKKLNNVCDVCPMA 562

Query: 179 KQCRDSFPISDRRASTAFDLLHCDLWGPNKLPASNGAVYFL 301
           KQ RDSFP S+ +AS  F+L+HCDLWGP  +P+S GAVYFL
Sbjct: 563 KQTRDSFPTSEHKASRLFELVHCDLWGPYSVPSSCGAVYFL 603


>XP_010667912.1 PREDICTED: uncharacterized protein LOC104884908 [Beta vulgaris
           subsp. vulgaris]
          Length = 1117

 Score =  133 bits (335), Expect = 3e-34
 Identities = 65/101 (64%), Positives = 73/101 (72%), Gaps = 1/101 (0%)
 Frame = +2

Query: 2   YYLRIPAVCAVTVS-GVSEFELWHRRLGHPSDRILKLVPAIRSSSSRKQLDHACTVCPQA 178
           YY  IP+VC VT    VSEFELWHRR GHPSD+I+KL+P   SS S K L  ACTVCPQA
Sbjct: 402 YYRGIPSVCVVTSPPAVSEFELWHRRFGHPSDKIVKLLPVFSSSGSSKSLPKACTVCPQA 461

Query: 179 KQCRDSFPISDRRASTAFDLLHCDLWGPNKLPASNGAVYFL 301
           KQ R SFP S  +AS  F+L+HCDLWG  K P+S GA YFL
Sbjct: 462 KQSRPSFPTSYNKASRIFELIHCDLWGSYKTPSSCGAHYFL 502


>KYP63606.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 320

 Score =  109 bits (272), Expect = 9e-27
 Identities = 49/101 (48%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
 Frame = +2

Query: 2   YYLR-IPAVCAVTVSGVSEFELWHRRLGHPSDRILKLVPAIRSSSSRKQLDHACTVCPQA 178
           YY R +  V A    GV+  +LWH+RLGHPS +I KL+P +  +  +  L+  C +C +A
Sbjct: 117 YYFRGVHMVQAFKTDGVNHVDLWHKRLGHPSFKISKLIPELSENKCKDLLNKNCDICFRA 176

Query: 179 KQCRDSFPISDRRASTAFDLLHCDLWGPNKLPASNGAVYFL 301
           KQ RD FP+S+ +A+  FDL+HCDLWGP K P+S GA YF+
Sbjct: 177 KQSRDMFPLSEHKANNIFDLIHCDLWGPYKSPSSCGAFYFM 217


>XP_010677195.1 PREDICTED: uncharacterized protein LOC104892872 [Beta vulgaris
           subsp. vulgaris]
          Length = 897

 Score =  107 bits (267), Expect = 5e-25
 Identities = 45/74 (60%), Positives = 60/74 (81%)
 Frame = +2

Query: 80  GHPSDRILKLVPAIRSSSSRKQLDHACTVCPQAKQCRDSFPISDRRASTAFDLLHCDLWG 259
           GHPS+R++K++PAIRSS  RK+L+  C VCP AKQ RDSFP+S  +A+  F+L+HCDLWG
Sbjct: 474 GHPSERVVKMLPAIRSSHDRKKLNKICDVCPMAKQTRDSFPLSTHKATRLFELIHCDLWG 533

Query: 260 PNKLPASNGAVYFL 301
           P  +P+S GA+YFL
Sbjct: 534 PYSVPSSCGAIYFL 547


>BAB10743.1 retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score =  104 bits (260), Expect = 4e-24
 Identities = 46/91 (50%), Positives = 65/91 (71%)
 Frame = +2

Query: 29  AVTVSGVSEFELWHRRLGHPSDRILKLVPAIRSSSSRKQLDHACTVCPQAKQCRDSFPIS 208
           AV  S  + F+LWHRRLGH SD+I+ L+P    SS ++ L++ C  C +AKQ RD+FP+S
Sbjct: 280 AVHTSVKAPFDLWHRRLGHASDKIVNLLPRELLSSGKEILENVCDTCMRAKQTRDTFPLS 339

Query: 209 DRRASTAFDLLHCDLWGPNKLPASNGAVYFL 301
           D R+  +F L+HCD+WGP + P+ +GA YFL
Sbjct: 340 DNRSMDSFQLIHCDVWGPYRTPSYSGARYFL 370


>AAG50751.1 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score =  104 bits (260), Expect = 5e-24
 Identities = 46/91 (50%), Positives = 65/91 (71%)
 Frame = +2

Query: 29  AVTVSGVSEFELWHRRLGHPSDRILKLVPAIRSSSSRKQLDHACTVCPQAKQCRDSFPIS 208
           AV  S  + F+LWHRRLGH SD+I+ L+P    SS ++ L++ C  C +AKQ RD+FP+S
Sbjct: 504 AVHTSVKAPFDLWHRRLGHASDKIVNLLPRELLSSGKEILENVCDTCMRAKQTRDTFPLS 563

Query: 209 DRRASTAFDLLHCDLWGPNKLPASNGAVYFL 301
           D R+  +F L+HCD+WGP + P+ +GA YFL
Sbjct: 564 DNRSMDSFQLIHCDVWGPYRAPSYSGARYFL 594


>XP_010681247.1 PREDICTED: uncharacterized protein LOC104896228 [Beta vulgaris
           subsp. vulgaris]
          Length = 561

 Score =  103 bits (258), Expect = 7e-24
 Identities = 47/70 (67%), Positives = 56/70 (80%)
 Frame = +2

Query: 2   YYLRIPAVCAVTVSGVSEFELWHRRLGHPSDRILKLVPAIRSSSSRKQLDHACTVCPQAK 181
           Y+ RIP + AV+   +SEFELWH RLGHPSDR++KLVP IR SS +K+L+ AC VCPQAK
Sbjct: 484 YFCRIPTLHAVSTPVLSEFELWHHRLGHPSDRVVKLVPVIRQSSKKKKLNKACVVCPQAK 543

Query: 182 QCRDSFPISD 211
           Q RDSFP SD
Sbjct: 544 QTRDSFPTSD 553


>CAA18107.1 LTR retrotransposon like protein [Arabidopsis thaliana] CAB79159.1
           LTR retrotransposon like protein [Arabidopsis thaliana]
          Length = 1109

 Score =  102 bits (255), Expect = 2e-23
 Identities = 45/91 (49%), Positives = 64/91 (70%)
 Frame = +2

Query: 29  AVTVSGVSEFELWHRRLGHPSDRILKLVPAIRSSSSRKQLDHACTVCPQAKQCRDSFPIS 208
           AV  S  + F+LWHRRLGH SD+I+ L+P    SS ++ L++ C  C +AKQ RD+FP+ 
Sbjct: 280 AVHTSVKAPFDLWHRRLGHASDKIVNLLPRELLSSGKEILENVCDTCMRAKQTRDTFPLR 339

Query: 209 DRRASTAFDLLHCDLWGPNKLPASNGAVYFL 301
           D R+  +F L+HCD+WGP + P+ +GA YFL
Sbjct: 340 DNRSMDSFQLIHCDVWGPYRTPSYSGARYFL 370


>KYP61781.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1413

 Score =  102 bits (253), Expect = 4e-23
 Identities = 47/100 (47%), Positives = 64/100 (64%)
 Frame = +2

Query: 2   YYLRIPAVCAVTVSGVSEFELWHRRLGHPSDRILKLVPAIRSSSSRKQLDHACTVCPQAK 181
           Y+  + A  A   S  + F+LWH+RLGHPS ++++L+P I  S S    + AC VC +AK
Sbjct: 448 YFQGMTATAAAVKSDENVFDLWHKRLGHPSPKVVELIPNIGFSRSDALCNKACDVCLRAK 507

Query: 182 QCRDSFPISDRRASTAFDLLHCDLWGPNKLPASNGAVYFL 301
           QCR+SFPIS  +    F L+HCDLWGP +  +  GA YFL
Sbjct: 508 QCRESFPISINKTMVIFQLIHCDLWGPYRTISHCGARYFL 547


>KYP64905.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 651

 Score =  101 bits (252), Expect = 5e-23
 Identities = 47/94 (50%), Positives = 62/94 (65%)
 Frame = +2

Query: 20  AVCAVTVSGVSEFELWHRRLGHPSDRILKLVPAIRSSSSRKQLDHACTVCPQAKQCRDSF 199
           A  A   S  + F+LWH+RLGHPS ++++L+P I SS S    + AC VC +AKQCR+SF
Sbjct: 3   ATAAAVKSDGNVFDLWHKRLGHPSPKVVELIPNIGSSRSDALCNKACDVCLRAKQCRESF 62

Query: 200 PISDRRASTAFDLLHCDLWGPNKLPASNGAVYFL 301
           PIS  +    F L+HCDLWGP +  +  GA YFL
Sbjct: 63  PISINKTMVIFQLIHCDLWGPYRTISHCGARYFL 96


>KYP64173.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 814

 Score =  101 bits (252), Expect = 5e-23
 Identities = 46/87 (52%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
 Frame = +2

Query: 47  VSEFELWHRRLGHPSDRILKLVPAIRSSSSRKQL--DHACTVCPQAKQCRDSFPISDRRA 220
           VS F+LWH+R+GHPS   LK+   I + S++  +  + AC VC +AKQ R+SFP+S+R+A
Sbjct: 447 VSTFDLWHKRMGHPS---LKITQMISNGSNKNNMIGNKACDVCQRAKQTRESFPLSNRKA 503

Query: 221 STAFDLLHCDLWGPNKLPASNGAVYFL 301
           S++F+L+HCDLWGP + P+S GA YFL
Sbjct: 504 SSSFELIHCDLWGPYRTPSSCGAYYFL 530


>XP_010674610.1 PREDICTED: uncharacterized protein LOC104890733 [Beta vulgaris
           subsp. vulgaris]
          Length = 585

 Score =  100 bits (249), Expect = 1e-22
 Identities = 47/96 (48%), Positives = 67/96 (69%)
 Frame = +2

Query: 14  IPAVCAVTVSGVSEFELWHRRLGHPSDRILKLVPAIRSSSSRKQLDHACTVCPQAKQCRD 193
           +P V   +VS  ++FELWHRR+GHPS++++KL+P +     R  L+ AC +C +AK  RD
Sbjct: 420 VPPVSIHSVS--ADFELWHRRMGHPSEKVVKLLPPL--CGHRGSLNKACEICFRAKHSRD 475

Query: 194 SFPISDRRASTAFDLLHCDLWGPNKLPASNGAVYFL 301
            FP+SD +AS  F+ +HCDLWGP +  +S GA YFL
Sbjct: 476 KFPLSDNKASRIFEKIHCDLWGPYRHVSSCGARYFL 511


>KYP77828.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 191

 Score = 94.0 bits (232), Expect = 6e-22
 Identities = 41/101 (40%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
 Frame = +2

Query: 2   YYLR-IPAVCAVTVSGVSEFELWHRRLGHPSDRILKLVPAIRSSSSRKQLDHACTVCPQA 178
           YYLR I    A+     + ++LWH+RLGH S + + ++P      ++   +  C +C + 
Sbjct: 81  YYLRRIVTATAMKAKSETSYDLWHKRLGHASTKAINMLPVTTFVQNKDSCNQVCDICLRE 140

Query: 179 KQCRDSFPISDRRASTAFDLLHCDLWGPNKLPASNGAVYFL 301
           KQ R+SF IS+ ++   F L+HCDLWGP + PA NGA YFL
Sbjct: 141 KQSRESFSISENKSMDIFQLIHCDLWGPYRTPAFNGARYFL 181


>XP_010676001.1 PREDICTED: uncharacterized protein LOC104891911 [Beta vulgaris
           subsp. vulgaris]
          Length = 586

 Score = 98.6 bits (244), Expect = 6e-22
 Identities = 48/100 (48%), Positives = 65/100 (65%)
 Frame = +2

Query: 2   YYLRIPAVCAVTVSGVSEFELWHRRLGHPSDRILKLVPAIRSSSSRKQLDHACTVCPQAK 181
           YY   P + +  V   S+ ELWHRR+GHPS++++KL+P +  SSSR  L+  C VC +AK
Sbjct: 468 YYFSKPEMVSA-VEATSDVELWHRRMGHPSEKVVKLLPHV--SSSRSGLNKGCEVCFRAK 524

Query: 182 QCRDSFPISDRRASTAFDLLHCDLWGPNKLPASNGAVYFL 301
             RD F +SD   S  F+ +HCDLWGP +  +S GA YFL
Sbjct: 525 HHRDKFSLSDTTCSRIFEKIHCDLWGPYRHESSCGARYFL 564


>XP_010677705.1 PREDICTED: uncharacterized protein LOC104893304 [Beta vulgaris
           subsp. vulgaris]
          Length = 1239

 Score = 98.6 bits (244), Expect = 7e-22
 Identities = 47/98 (47%), Positives = 66/98 (67%), Gaps = 1/98 (1%)
 Frame = +2

Query: 8   LRIPAVCAVTVSGVS-EFELWHRRLGHPSDRILKLVPAIRSSSSRKQLDHACTVCPQAKQ 184
           L +P   +V V+G S EF+LWHRR+GHPS++++KL+P +         + AC VC +AK 
Sbjct: 378 LLVPQFSSVAVNGASAEFDLWHRRMGHPSEKVVKLLPPLCGHVGSLS-NKACEVCFRAKH 436

Query: 185 CRDSFPISDRRASTAFDLLHCDLWGPNKLPASNGAVYF 298
            RD FP+SD +AS  F+ +HCDLWGP +  +S GA YF
Sbjct: 437 TRDKFPLSDSKASRIFEKIHCDLWGPYRHVSSCGARYF 474


>KYP43576.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 289

 Score = 95.9 bits (237), Expect = 7e-22
 Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
 Frame = +2

Query: 2   YYLR-IPAVCAVTVSGVSEFELWHRRLGHPSDRILKLVPAIRSSSSRKQLDHACTVCPQA 178
           YYLR I    A+     + ++LWH+RLGH S + + ++P      ++   +  C +C +A
Sbjct: 24  YYLRRIVTAAAMKAKSETSYDLWHKRLGHASTKAINMLPVTGFVQNKDSCNQVCDICLRA 83

Query: 179 KQCRDSFPISDRRASTAFDLLHCDLWGPNKLPASNGAVYFL 301
           KQ R+SF IS+ ++   F L+HCDLWGP + PA NGA YFL
Sbjct: 84  KQSRESFSISENKSMDIFQLIHCDLWGPYRTPAFNGARYFL 124


>KYP61584.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 224

 Score = 94.0 bits (232), Expect = 1e-21
 Identities = 43/87 (49%), Positives = 59/87 (67%)
 Frame = +2

Query: 41  SGVSEFELWHRRLGHPSDRILKLVPAIRSSSSRKQLDHACTVCPQAKQCRDSFPISDRRA 220
           +G  E  LWH+R+GHPS ++ KL   +R  +S  + +  C VC +AKQ RD FP+S   A
Sbjct: 129 NGTCELNLWHQRMGHPSFKVTKLASNMRCDNSILK-NKPCDVCLRAKQTRDVFPLSTNNA 187

Query: 221 STAFDLLHCDLWGPNKLPASNGAVYFL 301
           S +F+L+HCDLWGP + P+S GA YFL
Sbjct: 188 SDSFELIHCDLWGPYRTPSSCGASYFL 214


>GAU34891.1 hypothetical protein TSUD_144220 [Trifolium subterraneum]
          Length = 1218

 Score = 97.8 bits (242), Expect = 1e-21
 Identities = 50/101 (49%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
 Frame = +2

Query: 2   YYLR-IPAVCAVTVSGVSEFELWHRRLGHPSDRILKLVPAIRSSSSRKQLDHACTVCPQA 178
           YY R I     + V      +LWH+R+GHPS RI +LV  I SS +    + AC VC + 
Sbjct: 440 YYFRGIRHAKVLKVDAGISLDLWHKRMGHPSLRITELVSNI-SSKNNNYGNKACDVCQRV 498

Query: 179 KQCRDSFPISDRRASTAFDLLHCDLWGPNKLPASNGAVYFL 301
           +Q RDSFP+S+ +   AFDL+HCDLWGP K P+S GA YFL
Sbjct: 499 EQTRDSFPLSNHKVFNAFDLVHCDLWGPYKTPSSCGAYYFL 539


>AAD24600.1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score = 97.8 bits (242), Expect = 1e-21
 Identities = 43/91 (47%), Positives = 60/91 (65%)
 Frame = +2

Query: 29  AVTVSGVSEFELWHRRLGHPSDRILKLVPAIRSSSSRKQLDHACTVCPQAKQCRDSFPIS 208
           +VTV     +ELWH R+GHP+ R++ L+P    S S   L+ AC VC +AKQ R+SFP+S
Sbjct: 380 SVTVKEEKNYELWHSRMGHPAARVVSLIPESSVSVSSTHLNKACDVCHRAKQTRNSFPLS 439

Query: 209 DRRASTAFDLLHCDLWGPNKLPASNGAVYFL 301
             +    F+L++CDLWGP + P+  GA YFL
Sbjct: 440 INKTLRIFELIYCDLWGPYRTPSHTGARYFL 470


>XP_010420948.1 PREDICTED: uncharacterized protein LOC104706448 [Camelina sativa]
          Length = 770

 Score = 97.1 bits (240), Expect = 2e-21
 Identities = 44/100 (44%), Positives = 65/100 (65%)
 Frame = +2

Query: 2   YYLRIPAVCAVTVSGVSEFELWHRRLGHPSDRILKLVPAIRSSSSRKQLDHACTVCPQAK 181
           ++ R+    AVT       ELWH+R+GHPS ++L ++P I +S S   L+  C VC  AK
Sbjct: 334 HFRRMELAAAVTTQDTENLELWHKRMGHPSAKVLGVLPCISNSVSVINLNKDCDVCFCAK 393

Query: 182 QCRDSFPISDRRASTAFDLLHCDLWGPNKLPASNGAVYFL 301
           + R+SFP+S  + ST F+L+H  LWGP ++P+ +GA YFL
Sbjct: 394 KTRESFPLSMNKTSTIFELIHIVLWGPYRVPSHSGARYFL 433