BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00014060
         (4170 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_011085577.1 PREDICTED: DNA-directed RNA polymerase 2, chlorop...  1413   0.0  
CDP02357.1 unnamed protein product [Coffea canephora]                1396   0.0  
NP_001289520.1 DNA-directed RNA polymerase 2, chloroplastic/mito...  1387   0.0  
XP_009619460.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro...  1386   0.0  
XP_015063457.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro...  1383   0.0  
BAB78464.1 T7 bacteriophage-type single subunit RNA polymerase [...  1383   0.0  
NP_001311818.1 DNA-directed RNA polymerase 2B, chloroplastic/mit...  1383   0.0  
XP_019234815.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro...  1382   0.0  
XP_015063458.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro...  1382   0.0  
XP_004232127.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA ...  1381   0.0  
XP_016445194.1 PREDICTED: DNA-directed RNA polymerase 2, chlorop...  1380   0.0  
XP_006338320.1 PREDICTED: DNA-directed RNA polymerase 2, chlorop...  1378   0.0  
XP_017975629.1 PREDICTED: DNA-directed RNA polymerase 2, chlorop...  1377   0.0  
XP_017975628.1 PREDICTED: DNA-directed RNA polymerase 2, chlorop...  1372   0.0  
XP_010660553.1 PREDICTED: DNA-directed RNA polymerase 2, chlorop...  1369   0.0  
XP_019185406.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro...  1357   0.0  
XP_012835044.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro...  1357   0.0  
XP_010257888.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro...  1353   0.0  
XP_015880486.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro...  1350   0.0  
XP_007214918.1 hypothetical protein PRUPE_ppa000719mg [Prunus pe...  1349   0.0  

>XP_011085577.1 PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Sesamum indicum]
          Length = 1032

 Score = 1413 bits (3657), Expect = 0.0
 Identities = 725/1027 (70%), Positives = 821/1027 (79%), Gaps = 3/1027 (0%)
 Frame = +3

Query: 429  NPT*KILVMWRNIAIQVXXXXXXXXXXXXNKKVTSYSVFSRYCSFLGLSHDSIFSDSFMS 608
            NP     VMWRNI  QV             K   +    SR CSFLG + +S F D F  
Sbjct: 29   NPYRDCRVMWRNIVKQVSSRTPL-------KLCRNSESLSRTCSFLGSAQESAFPDKFKF 81

Query: 609  RPRNYCSFVSNDVFPEMGFRKDWIFCSKNRVLRRKNIYCLKHNVNTYGVCHTSNASVAEE 788
            RP    +      FPE+GF+K   F S++      + +  ++ +N  G+C  S ASVAE 
Sbjct: 82   RPLFELNSRPTFCFPELGFQKLGDFSSRDEF----SPFPARNQINWNGLCFKSYASVAEA 137

Query: 789  VEGVSNSDVEEMAXXXXXXXXXXXXXXXXXQELLKELRDQEKRSAAKRRRQFRISSGMGY 968
            V  VS +D+ E                   QELL E+R +E+R    R RQ R   GMG 
Sbjct: 138  V-AVSQTDLVE-------ENSVNVSVADEVQELLNEVRKEERRQYWTRWRQRRSVRGMGN 189

Query: 969  KKYKALRRRQVKIETEAWEQAANESKELLQDMCRHKLAPNLPYMKSLFLGWFEPLQAKIA 1148
            ++YKALRRRQVKIETEAW QAA E +ELL DMC  KLAPNLPYMKSLFLGWFEPL+ KIA
Sbjct: 190  ERYKALRRRQVKIETEAWGQAAKEYRELLNDMCEQKLAPNLPYMKSLFLGWFEPLRNKIA 249

Query: 1149 EEQDFCLRGKSKATHAKYFNLLPADKMAVITMHKLMALLMTGTDDHHGDAKVVHAACSIG 1328
            EEQ+F  +GKSKA +AKYF+LLPAD MAVITMHKLM LLMTG +  HG A+VV AAC IG
Sbjct: 250  EEQEFIRKGKSKAAYAKYFDLLPADMMAVITMHKLMGLLMTGGE--HGCARVVQAACIIG 307

Query: 1329 DAIEQEVRIHNFLEQTKKKNNKFQDGTMMEDGKSSGNAQEHEQQKKAVSGLMKKNKLGAV 1508
            DAIEQEVRI  FLE+TKKK  K Q  T  E  +  GN QE E+  + V+ L+KK KL AV
Sbjct: 308  DAIEQEVRIQYFLEKTKKK--KVQKNTEKEGEEFDGNNQEQEKLHQRVTMLIKKQKLQAV 365

Query: 1509 NQILKRQDDAKPWGTEAKAKVGSHLIELLLQTAYIQR-ADEIRDGSPDIRPAFVHTFKTA 1685
             Q++ RQ + +PWG +AKAKVGSHLIEL+LQTAYIQ  A++  +G PDIRPAFVHT +T 
Sbjct: 366  RQLVNRQIEYQPWGQDAKAKVGSHLIELILQTAYIQPPANQSTEGPPDIRPAFVHTMRTV 425

Query: 1686 V--SKFASRRYGVIHCDPQILKGLEKTARHMVILYMPMLIPPVKWTGYDKGAHIVLPSYI 1859
               +K +S+RYGVI CDP + KGLE+TARHMVI YMPML+PPVKWTGYDKGA++ LPSY+
Sbjct: 426  TKETKTSSKRYGVIQCDPLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYLYLPSYV 485

Query: 1860 MRTHGARQQRDVVRRTPRKQLQPVFEALDTIGSTKWRVNKRVLNIIDRIWASGGRLADLV 2039
            MRTHGARQQR+ V+R P +QL+PVFEALDT+GST+WRVNKRVL+IIDRIWASGG L DLV
Sbjct: 486  MRTHGARQQRESVKRAPTEQLKPVFEALDTLGSTRWRVNKRVLSIIDRIWASGGCLGDLV 545

Query: 2040 DREDIPLPEEPDTDDEALLXXXXXXXXXXXXENRERYSQRCDIELKLAVARKIKDEEGFY 2219
            DR DIPLPE PDT+DEALL            EN ER+S RCD ELKLAVARK+K+EEGF+
Sbjct: 546  DRSDIPLPERPDTEDEALLKKWKWKVKSIKKENSERHSIRCDTELKLAVARKMKEEEGFF 605

Query: 2220 YPHNLDFRGRAYPLHPHLNHLGSDVCRGILEFAEGRPLGESGLQWLKIHLANLYANGVDK 2399
            YPHNLDFRGRAYP+HPHLNHLGSD+CRGILEF+EGRPLG+SGL+WLKIHLANL+ANGVDK
Sbjct: 606  YPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLRWLKIHLANLFANGVDK 665

Query: 2400 LSSEGRITFTESHLDEIFDSADKPLEGQRWWLNAEDPFQCLAVCINLTEALRSTSPETTI 2579
            LS EGR+ FTE+HLD+I DSAD+PLEG+RWWLNAEDPFQCLA CINL EALRS SPETTI
Sbjct: 666  LSHEGRLAFTENHLDDIIDSADRPLEGKRWWLNAEDPFQCLAACINLAEALRSPSPETTI 725

Query: 2580 SHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAREKPADVYSGIASRVLEIMKRDANKD 2759
            SHIP+HQDGSCNGLQHYAALGRDKLGAAAVNLVA EKPADVYSGIA+RVL+IMK DA KD
Sbjct: 726  SHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLKIMKDDAQKD 785

Query: 2760 PAIFPDAMRARVLINQIDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDVIADDVELFG 2939
            PA+FPDA+RAR+LINQ+DRKLVKQTVMTSVYGVTYIGARDQIKRRLKER  IADD ELFG
Sbjct: 786  PAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDAELFG 845

Query: 2940 AACYAAKTTLTALGEMFEAARCIMKWLRECAKIIASENEPVCWTTPLGLPVVQPYRQTGR 3119
            AACYAAK TLTALG+MFEAAR IM WL ECAKIIASENEPVCWTTPLGLPVVQPYR+ GR
Sbjct: 846  AACYAAKITLTALGQMFEAARSIMTWLGECAKIIASENEPVCWTTPLGLPVVQPYRKVGR 905

Query: 3120 QLIKTSLQVLTLRRETDKVMVKKQITAFPPNFVHSLDSTHMMMTAMACKKAGLNFAGVHD 3299
             LIKTSLQVLTL+RE++KVMVK+Q TAFPPNFVHSLD +HMMMTA+ACKKAGLNFAGVHD
Sbjct: 906  HLIKTSLQVLTLQRESEKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGVHD 965

Query: 3300 SYWTHACDVDELNRILREKFVELYEMPVLENLLEGFQKSLPSLYFPPLPDRGDFDLKDVL 3479
            SYWTHACDVDE+NRILREKFVELYE P+LENLLEGFQ+S PSL FPPLPDRGDFDLK+VL
Sbjct: 966  SYWTHACDVDEMNRILREKFVELYEAPILENLLEGFQQSFPSLTFPPLPDRGDFDLKEVL 1025

Query: 3480 TSPYFFN 3500
             SPYFFN
Sbjct: 1026 QSPYFFN 1032


>CDP02357.1 unnamed protein product [Coffea canephora]
          Length = 1040

 Score = 1396 bits (3613), Expect = 0.0
 Identities = 710/1021 (69%), Positives = 816/1021 (79%), Gaps = 4/1021 (0%)
 Frame = +3

Query: 450  VMWRNIAIQVXXXXXXXXXXXXNKKVTSYSVFSRYCSFLGLSHDSIFSDSFMSRPRNYCS 629
            VMW+NIA  V               + +     R  SFLG S DSIF + F     ++ +
Sbjct: 38   VMWKNIAKLVSSRTLRTQEFG---SIFNPHSLPRTYSFLGFSQDSIFPEKFKFSTLDF-N 93

Query: 630  FVSNDVFPEMGFRKDWIFCSKNRVLRRKNIYCLKHNVNTYGVCHTSNASVAEEVEGVSNS 809
              S + F E GFRK   F +++  L R ++   ++ ++  G+   S AS+AE +  VS++
Sbjct: 94   PCSGNGFLEQGFRKVGEFSTRDEFLARPSLNFARNQISINGLSQKSYASLAEAI-AVSST 152

Query: 810  DVEEMAXXXXXXXXXXXXXXXXXQELLKELRDQEKRSAAKR-RRQFRISSGMGYKKYKAL 986
            DVEE                    ELL E++ +++R  + R R+  R   GMG KKY AL
Sbjct: 153  DVEE---------DTSVVAADEVHELLSEMKKEDRRQMSFRWRKHHRAVYGMGSKKYHAL 203

Query: 987  RRRQVKIETEAWEQAANESKELLQDMCRHKLAPNLPYMKSLFLGWFEPLQAKIAEEQDFC 1166
            +RRQVKIETEAWEQAANE KELL DMC HKLAPNLPYMKSLFLGWFEPL +KIAEEQ+ C
Sbjct: 204  KRRQVKIETEAWEQAANEYKELLNDMCEHKLAPNLPYMKSLFLGWFEPLCSKIAEEQELC 263

Query: 1167 LRGKSKATHAKYFNLLPADKMAVITMHKLMALLMTGTDDHHGDAKVVHAACSIGDAIEQE 1346
               KSKA +AKYF+ LPAD M+VITMHKLM LLMTG +  HG A+VV AAC IGDAIEQE
Sbjct: 264  RLRKSKAAYAKYFHQLPADMMSVITMHKLMGLLMTGGE--HGSARVVPAACLIGDAIEQE 321

Query: 1347 VRIHNFLEQTKKKNNKFQDGTMMEDGKSSGNAQEHEQQKKAVSGLMKKNKLGAVNQILKR 1526
            +RIH FLE+TKKK  K  +   ME   ++   QE E+ ++ V+ LMKK KL  V QI+K 
Sbjct: 322  IRIHKFLEKTKKK--KVNEEMKMEGDMTTSVIQEQEKLRRTVTNLMKKQKLHVVQQIVKG 379

Query: 1527 QDDAKPWGTEAKAKVGSHLIELLLQTAYIQR-ADEIRDGSPDIRPAFVHTFKTAVS--KF 1697
            QDD+KPW TE KAKVGS LIELLLQTAYIQ  AD++ D  PDIRPAF+HTF+T  +  K 
Sbjct: 380  QDDSKPWSTEVKAKVGSRLIELLLQTAYIQSPADQLADCPPDIRPAFIHTFRTVTNNTKS 439

Query: 1698 ASRRYGVIHCDPQILKGLEKTARHMVILYMPMLIPPVKWTGYDKGAHIVLPSYIMRTHGA 1877
             SRRYG+I CDP +LKGLE+TARHMVI YMPML+PPVKWTGYDKG H+ LPSY+MRTHGA
Sbjct: 440  PSRRYGIIQCDPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLFLPSYVMRTHGA 499

Query: 1878 RQQRDVVRRTPRKQLQPVFEALDTIGSTKWRVNKRVLNIIDRIWASGGRLADLVDREDIP 2057
            RQQR+ V+R P  QL+PV+EALDT+G+TKWRVNKRVL+++DRIWASGGRL +LVDR DI 
Sbjct: 500  RQQREAVKRAPINQLRPVYEALDTLGNTKWRVNKRVLSVVDRIWASGGRLGNLVDRNDIA 559

Query: 2058 LPEEPDTDDEALLXXXXXXXXXXXXENRERYSQRCDIELKLAVARKIKDEEGFYYPHNLD 2237
            LPEEP+T+DEA+L            EN ER+SQRCDIELKLAVAR++KDE GF+YPHNLD
Sbjct: 560  LPEEPETEDEAILRKWKWKVKSIKKENSERHSQRCDIELKLAVARRMKDEGGFFYPHNLD 619

Query: 2238 FRGRAYPLHPHLNHLGSDVCRGILEFAEGRPLGESGLQWLKIHLANLYANGVDKLSSEGR 2417
            FRGRAYP+HPHLNHLGSDVCRG+LEFAEGRPLG+SGL WLKIHLANL+ANGVDKLS E R
Sbjct: 620  FRGRAYPMHPHLNHLGSDVCRGMLEFAEGRPLGKSGLHWLKIHLANLFANGVDKLSHEAR 679

Query: 2418 ITFTESHLDEIFDSADKPLEGQRWWLNAEDPFQCLAVCINLTEALRSTSPETTISHIPIH 2597
            I FTE+HL++IFDSAD+PLEG+RWWLNAEDPFQCLAVCINL+EALRS SPETTISHIP+H
Sbjct: 680  IAFTENHLEDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLSEALRSQSPETTISHIPVH 739

Query: 2598 QDGSCNGLQHYAALGRDKLGAAAVNLVAREKPADVYSGIASRVLEIMKRDANKDPAIFPD 2777
            QDGSCNGLQHYAALGRDKLGA+AVNLVA EKPADVYSGIA+RVL+IMKRDA KDPA+FPD
Sbjct: 740  QDGSCNGLQHYAALGRDKLGASAVNLVAGEKPADVYSGIAARVLDIMKRDAQKDPAVFPD 799

Query: 2778 AMRARVLINQIDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDVIADDVELFGAACYAA 2957
            A+RARVL+NQ+DRKLVKQTVMTSVYGVTYIGARDQIKRRLKER  IADD ELFGAACYAA
Sbjct: 800  ALRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDAELFGAACYAA 859

Query: 2958 KTTLTALGEMFEAARCIMKWLRECAKIIASENEPVCWTTPLGLPVVQPYRQTGRQLIKTS 3137
            K TLTAL EMFEAAR IM WL ECAK+IASEN+ V W TPLGLPVVQPYRQ GR LIKTS
Sbjct: 860  KVTLTALEEMFEAARSIMSWLGECAKVIASENQTVRWMTPLGLPVVQPYRQLGRHLIKTS 919

Query: 3138 LQVLTLRRETDKVMVKKQITAFPPNFVHSLDSTHMMMTAMACKKAGLNFAGVHDSYWTHA 3317
            LQVLTL+RET+KVMVK+Q TAFPPNFVHSLD +HMMMTA+AC+KAGLNFAGVHDSYWTHA
Sbjct: 920  LQVLTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLNFAGVHDSYWTHA 979

Query: 3318 CDVDELNRILREKFVELYEMPVLENLLEGFQKSLPSLYFPPLPDRGDFDLKDVLTSPYFF 3497
            CDVDE+NRILREKFVELYE P+LENLLE FQK+ PSL FP LP+RGDFDLKDVL S YFF
Sbjct: 980  CDVDEMNRILREKFVELYETPILENLLEDFQKTFPSLSFPALPERGDFDLKDVLDSTYFF 1039

Query: 3498 N 3500
            N
Sbjct: 1040 N 1040


>NP_001289520.1 DNA-directed RNA polymerase 2, chloroplastic/mitochondrial [Nicotiana
            sylvestris] Q8VWF8.2 RecName: Full=DNA-directed RNA
            polymerase 2, chloroplastic/mitochondrial; AltName:
            Full=NsRpoT-B; AltName: Full=T7 bacteriophage-type single
            subunit RNA polymerase 2; Flags: Precursor CAC82575.2
            phage-type RNA polymerase [Nicotiana sylvestris]
          Length = 1020

 Score = 1387 bits (3589), Expect = 0.0
 Identities = 714/1028 (69%), Positives = 821/1028 (79%), Gaps = 4/1028 (0%)
 Frame = +3

Query: 429  NPT*KILVMWRNIAIQVXXXXXXXXXXXXNKKVTSYSVFSRYCSFLGLSHDSIFSDSFMS 608
            NP     +MWRNI  Q+              +   +S  +R  SFLG   DSIF D+   
Sbjct: 27   NPYHNSPIMWRNIIKQLSSR---------TPQKLLFSSKNRTYSFLGFGQDSIFKDNTKF 77

Query: 609  RPRNYCSFVSNDVFPEMGFRKDWIFCSKNRVLRRKNIYCLKHNVNTYGVCHTSNASVAEE 788
            R     S  SN V   MGF+    +   +  L R  I   K+ VN    C  S ASVAE 
Sbjct: 78   RSLIPIS-CSNIV---MGFQNLGEYLPGDEFLSRPLI---KNQVNNNFCCRKSYASVAEA 130

Query: 789  VEGVSNSDVEEMAXXXXXXXXXXXXXXXXXQELLKELRDQEKRSAAKRRRQFR-ISSGMG 965
            V  VS++D EE                    ELL EL+ +EK+  A RRR+ R ++SGMG
Sbjct: 131  V-AVSSTDAEE-----------DVSVVDEVHELLTELKKEEKKQFAFRRRKQRMLTSGMG 178

Query: 966  YKKYKALRRRQVKIETEAWEQAANESKELLQDMCRHKLAPNLPYMKSLFLGWFEPLQAKI 1145
            ++KY+ L+RRQVK+ETEAWEQAA E KELL DMC  KLAPNLPY+KSLFLGWFEPL+ KI
Sbjct: 179  HRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKI 238

Query: 1146 AEEQDFCLRGKSKATHAKYFNLLPADKMAVITMHKLMALLMTGTDDHHGDAKVVHAACSI 1325
            AEEQ+ C +GKSKA +AKYF  LPAD MAVITMHKLM LLMTG D  HG A+VV AA  I
Sbjct: 239  AEEQELCSQGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGD--HGTARVVQAALVI 296

Query: 1326 GDAIEQEVRIHNFLEQTKKKNNKFQDGTMMEDGKSSGNAQEHEQQKKAVSGLMKKNKLGA 1505
            GDAIEQEVRIHNFLE+TKK+  K +     EDG+     QE E+ +K V+ LMKK KL A
Sbjct: 297  GDAIEQEVRIHNFLEKTKKQ--KAEKDKQKEDGEHV--TQEQEKLRKKVTNLMKKQKLRA 352

Query: 1506 VNQILKRQDDAKPWGTEAKAKVGSHLIELLLQTAYIQR-ADEIRDGSPDIRPAFVHTFKT 1682
            V QI++RQDD+KPWG +A+AKVGS LI+LLLQTAYIQ  A+++    PDIRPAFVH+ +T
Sbjct: 353  VGQIVRRQDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDIRPAFVHSVRT 412

Query: 1683 AV--SKFASRRYGVIHCDPQILKGLEKTARHMVILYMPMLIPPVKWTGYDKGAHIVLPSY 1856
                +K ASRRYG+I CD  + KGLE+TARHMVI YMPML+PPVKWTGYDKG H+ LPSY
Sbjct: 413  VAKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSY 472

Query: 1857 IMRTHGARQQRDVVRRTPRKQLQPVFEALDTIGSTKWRVNKRVLNIIDRIWASGGRLADL 2036
            +MRTHGARQQR+ V+R  R QLQPVFEALDT+G+TKWR+NKRVL+++DRIWA GGRLADL
Sbjct: 473  VMRTHGARQQREAVKRASRNQLQPVFEALDTLGNTKWRINKRVLSVVDRIWAGGGRLADL 532

Query: 2037 VDREDIPLPEEPDTDDEALLXXXXXXXXXXXXENRERYSQRCDIELKLAVARKIKDEEGF 2216
            VDR+D PLPEEPDT+DEAL             ENRER+SQRCDIELKLAVARK+KDEE F
Sbjct: 533  VDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEESF 592

Query: 2217 YYPHNLDFRGRAYPLHPHLNHLGSDVCRGILEFAEGRPLGESGLQWLKIHLANLYANGVD 2396
            +YPHN+DFRGRAYP+HPHLNHLGSD+CRG+LEFAEGRPLGESGL+WLKIHLANL+A GV+
Sbjct: 593  FYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAEGRPLGESGLRWLKIHLANLFAGGVE 652

Query: 2397 KLSSEGRITFTESHLDEIFDSADKPLEGQRWWLNAEDPFQCLAVCINLTEALRSTSPETT 2576
            KLS EGRI FTE+H+D+IFDS+DKPLEG+RWWLNAEDPFQCLAVCINL+EA+RS+SPET+
Sbjct: 653  KLSLEGRIGFTENHMDDIFDSSDKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETS 712

Query: 2577 ISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAREKPADVYSGIASRVLEIMKRDANK 2756
            +SHIP+HQDGSCNGLQHYAALGRDKLGAAAVNLVA EKPADVYSGIA+RVL+IMKRDA +
Sbjct: 713  VSHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQR 772

Query: 2757 DPAIFPDAMRARVLINQIDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDVIADDVELF 2936
            DPA FPDA+RARVL+NQ+DRKLVKQTVMTSVYGVTYIGARDQIKRRLKER  IADD ELF
Sbjct: 773  DPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELF 832

Query: 2937 GAACYAAKTTLTALGEMFEAARCIMKWLRECAKIIASENEPVCWTTPLGLPVVQPYRQTG 3116
            GAACYAAK TLTALGEMFEAAR IM WL ECAKIIASENEPV WTTPLGLPVVQPYR+ G
Sbjct: 833  GAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIG 892

Query: 3117 RQLIKTSLQVLTLRRETDKVMVKKQITAFPPNFVHSLDSTHMMMTAMACKKAGLNFAGVH 3296
            R LIKTSLQ+LTL+RET+KVMVK+Q TAFPPNF+HSLD +HMMMTA+AC++AGLNFAGVH
Sbjct: 893  RHLIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVH 952

Query: 3297 DSYWTHACDVDELNRILREKFVELYEMPVLENLLEGFQKSLPSLYFPPLPDRGDFDLKDV 3476
            DSYWTHACDVD+LNRILREKFVELYE P+LE LLE FQ S P+L FPPLP+RGDFD++DV
Sbjct: 953  DSYWTHACDVDKLNRILREKFVELYEAPILEKLLESFQTSYPTLLFPPLPERGDFDMRDV 1012

Query: 3477 LTSPYFFN 3500
            L SPYFFN
Sbjct: 1013 LESPYFFN 1020


>XP_009619460.1 PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial [Nicotiana tomentosiformis]
          Length = 1021

 Score = 1386 bits (3588), Expect = 0.0
 Identities = 715/1022 (69%), Positives = 819/1022 (80%), Gaps = 5/1022 (0%)
 Frame = +3

Query: 450  VMWRNIAIQVXXXXXXXXXXXXNKKVTSYSVFSRYCSFLGLSHDSIFSDSFMSRPRNYCS 629
            +MWRNI  Q+              +   +S  +R  SFLG   DS+F D+   R     S
Sbjct: 34   IMWRNIIKQLSSR---------TPQKLLFSSKNRTYSFLGFGQDSVFKDNTKFRSLIPIS 84

Query: 630  FVSNDVFPEMGFRKDWIFCSKNRVLRRKNIYCLKHNVNTYGVC-HTSNASVAEEVEGVSN 806
              SN V   MGF+    +   +  L R     LK  VN+   C   S ASVAE V  VS+
Sbjct: 85   -CSNIV---MGFQNLGEYLPGDEFLSRP---LLKSQVNSNDFCCRKSYASVAEAV-AVSS 136

Query: 807  SDVEEMAXXXXXXXXXXXXXXXXXQELLKELRDQEKRSAAKRRRQFR-ISSGMGYKKYKA 983
            +D EE                   QELL EL+ +EK+  A RRR+ R ++SGMG++KY+ 
Sbjct: 137  TDAEE-----------DVSVVDEVQELLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQT 185

Query: 984  LRRRQVKIETEAWEQAANESKELLQDMCRHKLAPNLPYMKSLFLGWFEPLQAKIAEEQDF 1163
            L+RRQVK+ETEAWEQAA E KELL DMC  KLAPNLPY+KSLFLGWFEPL+ KIAEEQ+ 
Sbjct: 186  LKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQEL 245

Query: 1164 CLRGKSKATHAKYFNLLPADKMAVITMHKLMALLMTGTDDHHGDAKVVHAACSIGDAIEQ 1343
            C +GKSKA +AKY   LPAD MAVITMHKLM LLMTG D  HG A+VV AA  IGDAIEQ
Sbjct: 246  CSQGKSKAAYAKYLYQLPADMMAVITMHKLMGLLMTGGD--HGTARVVQAALVIGDAIEQ 303

Query: 1344 EVRIHNFLEQTKKKNNKFQDGTMMEDGKSSGNAQEHEQQKKAVSGLMKKNKLGAVNQILK 1523
            EVRIHNFLE+TKK+  K +     EDG+     QE E+ +K V+ LMKK KL AV QI++
Sbjct: 304  EVRIHNFLEKTKKQ--KAEKDKQKEDGEHV--TQEQEKLRKKVTNLMKKQKLRAVGQIVR 359

Query: 1524 RQDDAKPWGTEAKAKVGSHLIELLLQTAYIQR-ADEIRDGSPDIRPAFVHTFKTAV--SK 1694
            RQDD+KPWG +AKAKVGS LIELLLQTAYIQ  A+++    PDIRPAF+H+ +T    +K
Sbjct: 360  RQDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDPPDIRPAFLHSVRTVAKETK 419

Query: 1695 FASRRYGVIHCDPQILKGLEKTARHMVILYMPMLIPPVKWTGYDKGAHIVLPSYIMRTHG 1874
             ASRRYG+I CD  + KGLE+TARHMVI YMPML+PPVKWTGYDKG H+ LPSY+MRTHG
Sbjct: 420  SASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHG 479

Query: 1875 ARQQRDVVRRTPRKQLQPVFEALDTIGSTKWRVNKRVLNIIDRIWASGGRLADLVDREDI 2054
            ARQQR+ V+R  R QLQPVFEALDT+GSTKWR+NKRVL+++DRIWA GGRLADLVDR+D 
Sbjct: 480  ARQQREAVKRASRNQLQPVFEALDTLGSTKWRINKRVLSVVDRIWAGGGRLADLVDRDDA 539

Query: 2055 PLPEEPDTDDEALLXXXXXXXXXXXXENRERYSQRCDIELKLAVARKIKDEEGFYYPHNL 2234
            PLPEEPDT+DEAL             ENRER+SQRCDIELKLAVARK+KDEEGF+YPHN+
Sbjct: 540  PLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEEGFFYPHNV 599

Query: 2235 DFRGRAYPLHPHLNHLGSDVCRGILEFAEGRPLGESGLQWLKIHLANLYANGVDKLSSEG 2414
            DFRGRAYP+HPHLNHLGSD+CRG+LEFAEGRPLGESGL+WLKIHLANL+A GV+KLS EG
Sbjct: 600  DFRGRAYPMHPHLNHLGSDICRGVLEFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEG 659

Query: 2415 RITFTESHLDEIFDSADKPLEGQRWWLNAEDPFQCLAVCINLTEALRSTSPETTISHIPI 2594
            RI FTE+H+D+IFDSADKPLEG+RWWLNAEDPFQCLAVCINL+EA+RS+SPET+ISHIP+
Sbjct: 660  RIAFTENHMDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSISHIPV 719

Query: 2595 HQDGSCNGLQHYAALGRDKLGAAAVNLVAREKPADVYSGIASRVLEIMKRDANKDPAIFP 2774
            HQDGSCNGLQHYAALGRD+LGAAAVNLVA EKPADVYSGIA+RVL+IMKRDA +DPA FP
Sbjct: 720  HQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFP 779

Query: 2775 DAMRARVLINQIDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDVIADDVELFGAACYA 2954
            DA+RAR L+NQ+DRKLVKQTVMTSVYGVTYIGARDQIKRRLKER  IADD ELFGAACYA
Sbjct: 780  DAVRARALVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYA 839

Query: 2955 AKTTLTALGEMFEAARCIMKWLRECAKIIASENEPVCWTTPLGLPVVQPYRQTGRQLIKT 3134
            AK TLTALGEMFEAAR IM WL ECAKIIASENEPV WTTPLGLPVVQPYR+ GR LIKT
Sbjct: 840  AKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKT 899

Query: 3135 SLQVLTLRRETDKVMVKKQITAFPPNFVHSLDSTHMMMTAMACKKAGLNFAGVHDSYWTH 3314
            SLQ+LTL+RET+KVMVK+Q TAFPPNF+HSLD +HMMMTA+AC++AGLNFAGVHDSYWTH
Sbjct: 900  SLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTH 959

Query: 3315 ACDVDELNRILREKFVELYEMPVLENLLEGFQKSLPSLYFPPLPDRGDFDLKDVLTSPYF 3494
            ACDVD+LNRILREKFVELYE P+LE LLE FQ S P+L FPPLP+RGDFDL+DVL SPYF
Sbjct: 960  ACDVDKLNRILREKFVELYETPILEKLLESFQTSYPTLLFPPLPERGDFDLRDVLESPYF 1019

Query: 3495 FN 3500
            FN
Sbjct: 1020 FN 1021


>XP_015063457.1 PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial isoform X1 [Solanum
            pennellii]
          Length = 1020

 Score = 1383 bits (3580), Expect = 0.0
 Identities = 705/1036 (68%), Positives = 824/1036 (79%), Gaps = 8/1036 (0%)
 Frame = +3

Query: 417  EIPQNPT*KILVMWRNIAIQVXXXXXXXXXXXXNKKVTSYSVFSRYCSFLGLSHDSIFSD 596
            ++  NP     +MWRNI  Q              +K+   S    Y S+LG   DS+F D
Sbjct: 17   DLETNPYHNSPIMWRNIVKQFSTRTP--------QKILLTSKNHAY-SYLGFGLDSVFKD 67

Query: 597  SFMSRPRNYCSFV----SNDVFPEMGFRKDWIFCSKNRVLRRKNIYCLKHNVNTYGVCHT 764
              + R     SF+    SN  F EMGF+    F   +  LRR  +  +K  V+   +C  
Sbjct: 68   KRILR-----SFIPVSCSNSGFLEMGFQNLGEFLPGDEFLRRPLLCAMKSQVSNNDICRK 122

Query: 765  SNASVAEEVEGVSNSDVEEMAXXXXXXXXXXXXXXXXXQELLKELRDQEKRSAAKRRRQF 944
            + ASVAE V  VS++D EE                   QELL EL+ +EK+    RRR+ 
Sbjct: 123  NYASVAEAV-AVSSTDAEE-----------DVSVVGEVQELLTELKKEEKKQFTFRRRKQ 170

Query: 945  R-ISSGMGYKKYKALRRRQVKIETEAWEQAANESKELLQDMCRHKLAPNLPYMKSLFLGW 1121
            R ++SG+  +KY AL RRQV+IET+AWEQAA E +ELL DMC  KLAPNLPY+KSLFLGW
Sbjct: 171  RMLTSGIDRRKYPALMRRQVQIETQAWEQAAKEYRELLFDMCEQKLAPNLPYVKSLFLGW 230

Query: 1122 FEPLQAKIAEEQDFCLRGKSKATHAKYFNLLPADKMAVITMHKLMALLMTGTDDHHGDAK 1301
            FEPL+ KIA+EQ+ C++GKSKA ++KYF+LLPAD MAVITMHKLM LLMTG +  HG+ +
Sbjct: 231  FEPLRNKIAQEQELCIQGKSKAAYSKYFHLLPADMMAVITMHKLMGLLMTGGE--HGNVR 288

Query: 1302 VVHAACSIGDAIEQEVRIHNFLEQTKKKNNKFQDGTMMEDGKSSGNAQEHEQQKKAVSGL 1481
            VV AA +IGDAIEQEVRIH FLE+T+K  +K +    ++DG+ +    E ++  K V+ L
Sbjct: 289  VVQAALAIGDAIEQEVRIHKFLEKTEK--HKAEKDRNIKDGEHA--TLEQKKLHKKVTSL 344

Query: 1482 MKKNKLGAVNQILKRQDDAKPWGTEAKAKVGSHLIELLLQTAYIQR-ADEIRDGSPDIRP 1658
            MKK KL AVNQI++ QDD+KPWG +AKAKVGS LIE LLQTAYIQ  AD++    PDIRP
Sbjct: 345  MKKQKLRAVNQIVRSQDDSKPWGQDAKAKVGSRLIEFLLQTAYIQSPADQLAVDPPDIRP 404

Query: 1659 AFVHTFKTAV--SKFASRRYGVIHCDPQILKGLEKTARHMVILYMPMLIPPVKWTGYDKG 1832
            AF+H+ +T    +K ASRRYGVI CD  + KGLE+TARHMVI YMPML+PPVKWTGYDKG
Sbjct: 405  AFIHSTRTLAKETKSASRRYGVIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKG 464

Query: 1833 AHIVLPSYIMRTHGARQQRDVVRRTPRKQLQPVFEALDTIGSTKWRVNKRVLNIIDRIWA 2012
             H+ LPSY+MRTHGARQQR+ V+R  R QLQPVFEALDT+GSTKWR+NKRVL+++DRIWA
Sbjct: 465  GHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGSTKWRINKRVLSVVDRIWA 524

Query: 2013 SGGRLADLVDREDIPLPEEPDTDDEALLXXXXXXXXXXXXENRERYSQRCDIELKLAVAR 2192
             GGRLADLVDR+D+PLPEEPDT+DEA+             ENRER+SQRCDIELKLAVA 
Sbjct: 525  GGGRLADLVDRDDVPLPEEPDTEDEAVCTKWRWKVKSVKKENRERHSQRCDIELKLAVAH 584

Query: 2193 KIKDEEGFYYPHNLDFRGRAYPLHPHLNHLGSDVCRGILEFAEGRPLGESGLQWLKIHLA 2372
            ++KDEEGF+YPHN+DFRGRAYP+HPHLNHLGSD+CRG+LEFA GRPLGESGL+WLKIHLA
Sbjct: 585  RMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAAGRPLGESGLRWLKIHLA 644

Query: 2373 NLYANGVDKLSSEGRITFTESHLDEIFDSADKPLEGQRWWLNAEDPFQCLAVCINLTEAL 2552
            NL+A GVDKLS +GRI FTESHLD+IFDSADKPLEG+RWWLNAEDPFQCLAVCINL+EA+
Sbjct: 645  NLFAGGVDKLSLDGRIAFTESHLDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAV 704

Query: 2553 RSTSPETTISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAREKPADVYSGIASRVLE 2732
            RS+SPET ISH+P+HQDGSCNGLQHYAALGRDKLGAAAVNLVA EKPADVYSGIA+RVL+
Sbjct: 705  RSSSPETVISHVPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLD 764

Query: 2733 IMKRDANKDPAIFPDAMRARVLINQIDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDV 2912
            IM RDA +DPA FPDA+RARVL+NQ+DRKLVKQTVMTSVYGVTYIGARDQIKRRLKER  
Sbjct: 765  IMNRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGA 824

Query: 2913 IADDVELFGAACYAAKTTLTALGEMFEAARCIMKWLRECAKIIASENEPVCWTTPLGLPV 3092
            IADD ELFGAACYAAK TLTALGEMFEAAR IM WL ECAKIIASENEPV WTTPLGLPV
Sbjct: 825  IADDTELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPV 884

Query: 3093 VQPYRQTGRQLIKTSLQVLTLRRETDKVMVKKQITAFPPNFVHSLDSTHMMMTAMACKKA 3272
            VQPYR+ GR  IKTSLQ+LTL+RET+KVMVK+Q TAFPPNF+HSLD +HMMMTA+AC++A
Sbjct: 885  VQPYRKIGRHFIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRA 944

Query: 3273 GLNFAGVHDSYWTHACDVDELNRILREKFVELYEMPVLENLLEGFQKSLPSLYFPPLPDR 3452
            GLNFAGVHDSYWTHACDVD+LNRILREKFVELYE P+LE LLEGFQ S P+L FPPLP+R
Sbjct: 945  GLNFAGVHDSYWTHACDVDKLNRILREKFVELYETPILEKLLEGFQVSYPTLSFPPLPER 1004

Query: 3453 GDFDLKDVLTSPYFFN 3500
            GDFDL+DV+ SPYFFN
Sbjct: 1005 GDFDLRDVIESPYFFN 1020


>BAB78464.1 T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
            sylvestris] BAB78465.1 T7 bacteriophage-type single
            subunit RNA polymerase [Nicotiana sylvestris]
          Length = 1020

 Score = 1383 bits (3580), Expect = 0.0
 Identities = 712/1028 (69%), Positives = 820/1028 (79%), Gaps = 4/1028 (0%)
 Frame = +3

Query: 429  NPT*KILVMWRNIAIQVXXXXXXXXXXXXNKKVTSYSVFSRYCSFLGLSHDSIFSDSFMS 608
            NP     +MWRNI  Q+              +   +S  +R  SFLG   DSIF D+   
Sbjct: 27   NPYHNSPIMWRNIIKQLSSR---------TPQKLLFSSKNRTYSFLGFGQDSIFKDNTKF 77

Query: 609  RPRNYCSFVSNDVFPEMGFRKDWIFCSKNRVLRRKNIYCLKHNVNTYGVCHTSNASVAEE 788
            R     S  SN V   MGF+    +   +  L R  I   K+ VN    C  S ASVAE 
Sbjct: 78   RSLIPIS-CSNIV---MGFQNLGEYLPGDEFLSRPLI---KNQVNNNFCCRKSYASVAEA 130

Query: 789  VEGVSNSDVEEMAXXXXXXXXXXXXXXXXXQELLKELRDQEKRSAAKRRRQFR-ISSGMG 965
            V  VS++D EE                    ELL EL+ +EK+  A RRR+ R ++SGMG
Sbjct: 131  V-AVSSTDAEE-----------DVSVVDEVHELLTELKKEEKKQFAFRRRKQRMLTSGMG 178

Query: 966  YKKYKALRRRQVKIETEAWEQAANESKELLQDMCRHKLAPNLPYMKSLFLGWFEPLQAKI 1145
            ++KY+ L+RRQVK+ETEAWEQAA E KELL DMC  KLAPNLPY+KSLFLGWFEPL+ KI
Sbjct: 179  HRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKI 238

Query: 1146 AEEQDFCLRGKSKATHAKYFNLLPADKMAVITMHKLMALLMTGTDDHHGDAKVVHAACSI 1325
            AEEQ+ C +GKSKA +AKYF  LPAD MAVITMHKLM LLMTG D  HG A+VV AA  I
Sbjct: 239  AEEQELCSQGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGD--HGTARVVQAALVI 296

Query: 1326 GDAIEQEVRIHNFLEQTKKKNNKFQDGTMMEDGKSSGNAQEHEQQKKAVSGLMKKNKLGA 1505
            GDAIEQEVRIHNFLE+TKK+  K +     EDG+     QE E+ +K V+ LMKK KL A
Sbjct: 297  GDAIEQEVRIHNFLEKTKKQ--KAEKDKQKEDGEHV--TQEQEKLRKKVTNLMKKQKLRA 352

Query: 1506 VNQILKRQDDAKPWGTEAKAKVGSHLIELLLQTAYIQR-ADEIRDGSPDIRPAFVHTFKT 1682
            V QI++RQDD+KPWG +A+AKVGS LI+LLLQTAYIQ  A+++    PDI PAFVH+ +T
Sbjct: 353  VGQIVRRQDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDIPPAFVHSVRT 412

Query: 1683 AV--SKFASRRYGVIHCDPQILKGLEKTARHMVILYMPMLIPPVKWTGYDKGAHIVLPSY 1856
                +K ASRRYG+I CD  + KGLE+TARHMVI YMPML+PPVKWTGYDKG H+ LPSY
Sbjct: 413  VAKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSY 472

Query: 1857 IMRTHGARQQRDVVRRTPRKQLQPVFEALDTIGSTKWRVNKRVLNIIDRIWASGGRLADL 2036
            +MRTHGARQQR+ V+R  R QLQPVFEALDT+G+TKWR+NKRVL+++DRIWA GGRLADL
Sbjct: 473  VMRTHGARQQREAVKRASRNQLQPVFEALDTLGNTKWRINKRVLSVVDRIWAGGGRLADL 532

Query: 2037 VDREDIPLPEEPDTDDEALLXXXXXXXXXXXXENRERYSQRCDIELKLAVARKIKDEEGF 2216
            VDR+D PLPEEPDT+DEALL            ENRER+SQRCDIELKLAVARK+KDEE F
Sbjct: 533  VDRDDAPLPEEPDTEDEALLPKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEESF 592

Query: 2217 YYPHNLDFRGRAYPLHPHLNHLGSDVCRGILEFAEGRPLGESGLQWLKIHLANLYANGVD 2396
            +YPHN+DFRGRAYP+HPHLNHLGSD+CRG+LEFAEGRPLGESGL+WLKIHLANL+A GV+
Sbjct: 593  FYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAEGRPLGESGLRWLKIHLANLFAGGVE 652

Query: 2397 KLSSEGRITFTESHLDEIFDSADKPLEGQRWWLNAEDPFQCLAVCINLTEALRSTSPETT 2576
            KLS EGRI FTE+H+D+IFDS+DKPLEG+RWWLNAEDPFQCLAVCINL+EA+RS+SPET+
Sbjct: 653  KLSLEGRIGFTENHMDDIFDSSDKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETS 712

Query: 2577 ISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAREKPADVYSGIASRVLEIMKRDANK 2756
            +SHIP+HQDGSCNGLQHYAALGRDKLGAAAVNLVA EKPA+ YSGIA+RVL+IMKRDA +
Sbjct: 713  VSHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPAEAYSGIAARVLDIMKRDAQR 772

Query: 2757 DPAIFPDAMRARVLINQIDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDVIADDVELF 2936
            DPA FPDA+RARVL+NQ+DRKLVKQTVMTSVYGVTYIGARDQIKRRLKER  IADD ELF
Sbjct: 773  DPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELF 832

Query: 2937 GAACYAAKTTLTALGEMFEAARCIMKWLRECAKIIASENEPVCWTTPLGLPVVQPYRQTG 3116
            GAACYAAK TLTALGEMFEAAR IM WL ECAKIIASENEPV WTTPLGLPVVQPYR+ G
Sbjct: 833  GAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIG 892

Query: 3117 RQLIKTSLQVLTLRRETDKVMVKKQITAFPPNFVHSLDSTHMMMTAMACKKAGLNFAGVH 3296
            R LIKTSLQ+LTL+RET+KVMVK+Q TAFPPNF+HSLD +HMMMTA+AC++AGLNFAGVH
Sbjct: 893  RHLIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVH 952

Query: 3297 DSYWTHACDVDELNRILREKFVELYEMPVLENLLEGFQKSLPSLYFPPLPDRGDFDLKDV 3476
            DSYWTHACDVD+LNRILREKFVELYE P+LE LLE FQ S P+L FPPLP+RGDFD++DV
Sbjct: 953  DSYWTHACDVDKLNRILREKFVELYEAPILEKLLESFQTSYPTLLFPPLPERGDFDMRDV 1012

Query: 3477 LTSPYFFN 3500
            L SPYFFN
Sbjct: 1013 LESPYFFN 1020


>NP_001311818.1 DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial
            [Nicotiana tabacum] Q8L6J3.2 RecName: Full=DNA-directed
            RNA polymerase 2B, chloroplastic/mitochondrial; AltName:
            Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 2B; Flags: Precursor
            CAC95020.1 mitochondrial and chloroplast RNA polymerase
            [Nicotiana tabacum]
          Length = 1021

 Score = 1383 bits (3580), Expect = 0.0
 Identities = 714/1022 (69%), Positives = 819/1022 (80%), Gaps = 5/1022 (0%)
 Frame = +3

Query: 450  VMWRNIAIQVXXXXXXXXXXXXNKKVTSYSVFSRYCSFLGLSHDSIFSDSFMSRPRNYCS 629
            +MWRNI  Q+              +   +S  +R  SFLG   DS+F D+   R     S
Sbjct: 34   IMWRNIIKQLSSR---------TPQKLLFSSKNRTYSFLGFGQDSVFKDNTKFRSLIPIS 84

Query: 630  FVSNDVFPEMGFRKDWIFCSKNRVLRRKNIYCLKHNVNTYGVC-HTSNASVAEEVEGVSN 806
              SN V   MGF+    +   +  L R     LK+ VN+   C   S ASVAE V  VS+
Sbjct: 85   -CSNIV---MGFQNLGEYLPGDEFLSRP---LLKNQVNSNDFCCRKSYASVAEAV-AVSS 136

Query: 807  SDVEEMAXXXXXXXXXXXXXXXXXQELLKELRDQEKRSAAKRRRQFR-ISSGMGYKKYKA 983
            +D EE                   QELL EL+ +EK+  A RRR+ R ++SGMG++KY+ 
Sbjct: 137  TDAEE-----------DVSVVDEVQELLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQT 185

Query: 984  LRRRQVKIETEAWEQAANESKELLQDMCRHKLAPNLPYMKSLFLGWFEPLQAKIAEEQDF 1163
            L+RRQVK+ETEAWEQAA E KELL DMC  KLAPNLPY+KSLFLGWFEPL+ KIAEEQ+ 
Sbjct: 186  LKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQEL 245

Query: 1164 CLRGKSKATHAKYFNLLPADKMAVITMHKLMALLMTGTDDHHGDAKVVHAACSIGDAIEQ 1343
            C +GKSKA +AKY   LPAD MAVITMHKLM LLMTG D  HG A+VV AA  IGDAIEQ
Sbjct: 246  CSQGKSKAAYAKYLYQLPADMMAVITMHKLMGLLMTGGD--HGTARVVQAALVIGDAIEQ 303

Query: 1344 EVRIHNFLEQTKKKNNKFQDGTMMEDGKSSGNAQEHEQQKKAVSGLMKKNKLGAVNQILK 1523
            EVRIHNFLE+TKK+  K +     EDG+     QE E+ +K V+ LMKK KL AV QI++
Sbjct: 304  EVRIHNFLEKTKKQ--KAEKDKQKEDGEHV--TQEQEKLRKKVTNLMKKQKLRAVGQIVR 359

Query: 1524 RQDDAKPWGTEAKAKVGSHLIELLLQTAYIQR-ADEIRDGSPDIRPAFVHTFKTAV--SK 1694
            RQDD+KPWG +AKAKVGS LIELLLQTAYIQ  A+++    PDIRPAF+H+ +T    +K
Sbjct: 360  RQDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDPPDIRPAFLHSVRTVAKETK 419

Query: 1695 FASRRYGVIHCDPQILKGLEKTARHMVILYMPMLIPPVKWTGYDKGAHIVLPSYIMRTHG 1874
             ASRRYG+I CD  + KGLE+TARHMVI YMPML+PPVKWTGYDKG H+ LPSY+MRTHG
Sbjct: 420  SASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHG 479

Query: 1875 ARQQRDVVRRTPRKQLQPVFEALDTIGSTKWRVNKRVLNIIDRIWASGGRLADLVDREDI 2054
            ARQQR+ V+R  R QLQPVFEALDT+GSTKWR+NKRVL++IDRIWA GGRLADLVDR+D 
Sbjct: 480  ARQQREAVKRASRNQLQPVFEALDTLGSTKWRINKRVLSVIDRIWAGGGRLADLVDRDDA 539

Query: 2055 PLPEEPDTDDEALLXXXXXXXXXXXXENRERYSQRCDIELKLAVARKIKDEEGFYYPHNL 2234
            PLPEEPDT+DEAL             ENRER+SQRCDIELKLAVARK+KDEEGF+YPHN+
Sbjct: 540  PLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEEGFFYPHNV 599

Query: 2235 DFRGRAYPLHPHLNHLGSDVCRGILEFAEGRPLGESGLQWLKIHLANLYANGVDKLSSEG 2414
            DFRGRAYP+HPHLNHLGSD+CRG+L FAEGRPLGESGL+WLKIHLANL+A GV+KLS EG
Sbjct: 600  DFRGRAYPMHPHLNHLGSDICRGVLVFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEG 659

Query: 2415 RITFTESHLDEIFDSADKPLEGQRWWLNAEDPFQCLAVCINLTEALRSTSPETTISHIPI 2594
            RI FTE+H+D+IFDSADKPLEG+RWWLNAEDPFQCLAVCINL+EA+RS+SPET+ISHIP+
Sbjct: 660  RIAFTENHMDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSISHIPV 719

Query: 2595 HQDGSCNGLQHYAALGRDKLGAAAVNLVAREKPADVYSGIASRVLEIMKRDANKDPAIFP 2774
            HQDGSCNGLQHYAALGRD+LGAAAVNLVA EKPADVYSGIA+RVL+IMKRDA +DPA FP
Sbjct: 720  HQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFP 779

Query: 2775 DAMRARVLINQIDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDVIADDVELFGAACYA 2954
            DA+RAR L+NQ+DRKLVKQTVMTSVYGVTYIGARDQIKRRLKER  IADD ELFGAACYA
Sbjct: 780  DAVRARALVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYA 839

Query: 2955 AKTTLTALGEMFEAARCIMKWLRECAKIIASENEPVCWTTPLGLPVVQPYRQTGRQLIKT 3134
            AK TLTALGEMFEAAR IM WL ECAKIIASENEPV WTTPLGLPVVQPYR+ GR LIKT
Sbjct: 840  AKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKT 899

Query: 3135 SLQVLTLRRETDKVMVKKQITAFPPNFVHSLDSTHMMMTAMACKKAGLNFAGVHDSYWTH 3314
            SLQ+LTL++ET+KVMVK+Q TAFPPNF+HSLD +HMMMTA+AC++AGLNFAGVHDSYWTH
Sbjct: 900  SLQILTLQQETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTH 959

Query: 3315 ACDVDELNRILREKFVELYEMPVLENLLEGFQKSLPSLYFPPLPDRGDFDLKDVLTSPYF 3494
            ACDVD+LNRILREKFVELYE P+LE LLE FQ S P+L FPPLP+RGDFDL+DVL SPYF
Sbjct: 960  ACDVDKLNRILREKFVELYETPILEKLLESFQTSYPTLLFPPLPERGDFDLRDVLESPYF 1019

Query: 3495 FN 3500
            FN
Sbjct: 1020 FN 1021


>XP_019234815.1 PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial [Nicotiana attenuata]
            OIT26485.1 dna-directed rna polymerase 2b,
            chloroplasticmitochondrial [Nicotiana attenuata]
          Length = 1024

 Score = 1382 bits (3576), Expect = 0.0
 Identities = 716/1034 (69%), Positives = 821/1034 (79%), Gaps = 10/1034 (0%)
 Frame = +3

Query: 429  NPT*KILVMWRNIAIQVXXXXXXXXXXXXNKKVTSYSVFSRYCSFLGLSHDSIFSDS--F 602
            NP     +MWRNI  Q+              +   +S  +R  SFLG   DSIF D+  F
Sbjct: 27   NPYHNSPIMWRNIIKQLSSR---------TPQKLLFSSKNRTYSFLGFRQDSIFKDNTKF 77

Query: 603  MSRPRNYCSFVSNDVFPEMGFRKDWIFCSKNRVLRRKNIYCLKHNVNTYGVCH----TSN 770
             S     CS +      EMGF+        +  L R  I   K+ VN    C+     S 
Sbjct: 78   RSLIPISCSNI------EMGFQNLGENLPGDEFLSRPLI---KNQVNNNDFCYFCFRKSY 128

Query: 771  ASVAEEVEGVSNSDVEEMAXXXXXXXXXXXXXXXXXQELLKELRDQEKRSAA-KRRRQFR 947
            ASVAE V  VS++D EE                   QELL EL+ +EK+  A +RR+Q  
Sbjct: 129  ASVAEAV-AVSSTDAEE-----------DVPVVDEVQELLTELKKEEKKQFAFRRRKQKM 176

Query: 948  ISSGMGYKKYKALRRRQVKIETEAWEQAANESKELLQDMCRHKLAPNLPYMKSLFLGWFE 1127
            ++SGMG++KY+AL+RRQVK+ETEAWEQAA E KELL DMC  KLAPNLPY+KSLFLGWFE
Sbjct: 177  LTSGMGHRKYQALKRRQVKVETEAWEQAAKEYKELLFDMCEKKLAPNLPYVKSLFLGWFE 236

Query: 1128 PLQAKIAEEQDFCLRGKSKATHAKYFNLLPADKMAVITMHKLMALLMTGTDDHHGDAKVV 1307
            PL+ KIAEEQ+ C +GKSKA +AKYF  LPAD MAVITMHKLM LLMTG D  HG A+VV
Sbjct: 237  PLRDKIAEEQELCSQGKSKAGYAKYFYQLPADMMAVITMHKLMGLLMTGGD--HGTARVV 294

Query: 1308 HAACSIGDAIEQEVRIHNFLEQTKKKNNKFQDGTMMEDGKSSGNAQEHEQQKKAVSGLMK 1487
             AA  IGDAIEQEVRIHNFLE+TKK+  K +     EDG+     QE E+ +K V+ LMK
Sbjct: 295  QAALVIGDAIEQEVRIHNFLEKTKKQ--KAEKDRQKEDGEHV--TQEQEKLRKKVTNLMK 350

Query: 1488 KNKLGAVNQILKRQDDAKPWGTEAKAKVGSHLIELLLQTAYIQR-ADEIRDGSPDIRPAF 1664
            K KL AV QI++RQDD+KPWG +AKAKVGS LIELLLQTAYIQ  A+++    PDIRPAF
Sbjct: 351  KQKLRAVGQIVRRQDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDPPDIRPAF 410

Query: 1665 VHTFKTAV--SKFASRRYGVIHCDPQILKGLEKTARHMVILYMPMLIPPVKWTGYDKGAH 1838
            +H+ +T    +K ASRRYG+I CD  + KGLE+TARHMVI YMPML+PPVKWTGYDKG H
Sbjct: 411  LHSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGH 470

Query: 1839 IVLPSYIMRTHGARQQRDVVRRTPRKQLQPVFEALDTIGSTKWRVNKRVLNIIDRIWASG 2018
            + LPSY+MRTHGARQQR+ V+R  R QLQPVFEALDT+GSTKWR+NKRVL+++DRIWA G
Sbjct: 471  LYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGSTKWRINKRVLSVVDRIWAGG 530

Query: 2019 GRLADLVDREDIPLPEEPDTDDEALLXXXXXXXXXXXXENRERYSQRCDIELKLAVARKI 2198
            GRLADLVDR+D  LPEEPDT+DEAL             ENRER+SQRCDIELKLAVARK+
Sbjct: 531  GRLADLVDRDDSLLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARKM 590

Query: 2199 KDEEGFYYPHNLDFRGRAYPLHPHLNHLGSDVCRGILEFAEGRPLGESGLQWLKIHLANL 2378
            KDEEGF+YPHN+DFRGRAYP+HPHLNHLGSD+CRG+LEFA GRPLGESGL+WLKIHLANL
Sbjct: 591  KDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAVGRPLGESGLRWLKIHLANL 650

Query: 2379 YANGVDKLSSEGRITFTESHLDEIFDSADKPLEGQRWWLNAEDPFQCLAVCINLTEALRS 2558
            +A GV+KLS EGRI FTE+H+D+IFDSADKPLEG+RWWLNAEDPFQCLAVCINL+E +RS
Sbjct: 651  FAGGVEKLSHEGRIAFTENHMDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEVVRS 710

Query: 2559 TSPETTISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAREKPADVYSGIASRVLEIM 2738
            +SPET+ISHIP+HQDGSCNGLQHYAALGRDKLGAAAVNLVA EKPADVYSGIA+RVL+IM
Sbjct: 711  SSPETSISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIM 770

Query: 2739 KRDANKDPAIFPDAMRARVLINQIDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDVIA 2918
            KRDA +DPA FPDA+RAR L+NQ+DRKLVKQTVMTSVYGVTYIGARDQIKRRLKER  IA
Sbjct: 771  KRDAQRDPAEFPDAVRARALVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIA 830

Query: 2919 DDVELFGAACYAAKTTLTALGEMFEAARCIMKWLRECAKIIASENEPVCWTTPLGLPVVQ 3098
            DD ELFGAACYAAK TLTALGEMFEAAR IM WL ECAKIIASENEPV WTTPLGLPVVQ
Sbjct: 831  DDSELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQ 890

Query: 3099 PYRQTGRQLIKTSLQVLTLRRETDKVMVKKQITAFPPNFVHSLDSTHMMMTAMACKKAGL 3278
            PYR+ GR LIKTSLQ+LTL+RET+KVMVK+Q TAFPPNF+HSLD +HMMMTA+AC++AGL
Sbjct: 891  PYRKIGRHLIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGL 950

Query: 3279 NFAGVHDSYWTHACDVDELNRILREKFVELYEMPVLENLLEGFQKSLPSLYFPPLPDRGD 3458
            NFAGVHDSYWTHACDVD+LNRILREKFVELY+ P+LE LLE FQ S P+L FPPLP+RGD
Sbjct: 951  NFAGVHDSYWTHACDVDKLNRILREKFVELYDTPILEKLLESFQTSYPTLLFPPLPERGD 1010

Query: 3459 FDLKDVLTSPYFFN 3500
            FDL+DVL SPYFFN
Sbjct: 1011 FDLRDVLESPYFFN 1024


>XP_015063458.1 PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial isoform X2 [Solanum
            pennellii]
          Length = 1019

 Score = 1382 bits (3576), Expect = 0.0
 Identities = 704/1035 (68%), Positives = 823/1035 (79%), Gaps = 7/1035 (0%)
 Frame = +3

Query: 417  EIPQNPT*KILVMWRNIAIQVXXXXXXXXXXXXNKKVTSYSVFSRYCSFLGLSHDSIFSD 596
            ++  NP     +MWRNI  Q              +K+   S    Y S+LG   DS+F D
Sbjct: 17   DLETNPYHNSPIMWRNIVKQFSTRTP--------QKILLTSKNHAY-SYLGFGLDSVFKD 67

Query: 597  SFMSRPRNYCSFV----SNDVFPEMGFRKDWIFCSKNRVLRRKNIYCLKHNVNTYGVCHT 764
              + R     SF+    SN  F EMGF+    F   +  LRR  +  +K  V+   +C  
Sbjct: 68   KRILR-----SFIPVSCSNSGFLEMGFQNLGEFLPGDEFLRRPLLCAMKSQVSNNDICRK 122

Query: 765  SNASVAEEVEGVSNSDVEEMAXXXXXXXXXXXXXXXXXQELLKELRDQEKRSAAKRRRQF 944
            + ASVAE V  VS++D EE                   QELL EL+ +EK+    RRR+ 
Sbjct: 123  NYASVAEAV-AVSSTDAEE-----------DVSVVGEVQELLTELKKEEKKQFTFRRRKQ 170

Query: 945  R-ISSGMGYKKYKALRRRQVKIETEAWEQAANESKELLQDMCRHKLAPNLPYMKSLFLGW 1121
            R ++SG+  +KY AL RRQV+IET+AWEQAA E +ELL DMC  KLAPNLPY+KSLFLGW
Sbjct: 171  RMLTSGIDRRKYPALMRRQVQIETQAWEQAAKEYRELLFDMCEQKLAPNLPYVKSLFLGW 230

Query: 1122 FEPLQAKIAEEQDFCLRGKSKATHAKYFNLLPADKMAVITMHKLMALLMTGTDDHHGDAK 1301
            FEPL+ KIA+EQ+ C++GKSKA ++KYF+LLPAD MAVITMHKLM LLMTG +  HG+ +
Sbjct: 231  FEPLRNKIAQEQELCIQGKSKAAYSKYFHLLPADMMAVITMHKLMGLLMTGGE--HGNVR 288

Query: 1302 VVHAACSIGDAIEQEVRIHNFLEQTKKKNNKFQDGTMMEDGKSSGNAQEHEQQKKAVSGL 1481
            VV AA +IGDAIEQEVRIH FLE+T+K  +K +    ++DG+ +    E ++  K V+ L
Sbjct: 289  VVQAALAIGDAIEQEVRIHKFLEKTEK--HKAEKDRNIKDGEHA--TLEQKKLHKKVTSL 344

Query: 1482 MKKNKLGAVNQILKRQDDAKPWGTEAKAKVGSHLIELLLQTAYIQR-ADEIRDGSPDIRP 1658
            MKK KL AVNQI++ QDD+KPWG +AKAKVGS LIE LLQTAYIQ  AD++    PDIRP
Sbjct: 345  MKKQKLRAVNQIVRSQDDSKPWGQDAKAKVGSRLIEFLLQTAYIQSPADQLAVDPPDIRP 404

Query: 1659 AFVHTFKTAVSKF-ASRRYGVIHCDPQILKGLEKTARHMVILYMPMLIPPVKWTGYDKGA 1835
            AF+H+ +T   +  ASRRYGVI CD  + KGLE+TARHMVI YMPML+PPVKWTGYDKG 
Sbjct: 405  AFIHSTRTLAKETNASRRYGVIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGG 464

Query: 1836 HIVLPSYIMRTHGARQQRDVVRRTPRKQLQPVFEALDTIGSTKWRVNKRVLNIIDRIWAS 2015
            H+ LPSY+MRTHGARQQR+ V+R  R QLQPVFEALDT+GSTKWR+NKRVL+++DRIWA 
Sbjct: 465  HLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGSTKWRINKRVLSVVDRIWAG 524

Query: 2016 GGRLADLVDREDIPLPEEPDTDDEALLXXXXXXXXXXXXENRERYSQRCDIELKLAVARK 2195
            GGRLADLVDR+D+PLPEEPDT+DEA+             ENRER+SQRCDIELKLAVA +
Sbjct: 525  GGRLADLVDRDDVPLPEEPDTEDEAVCTKWRWKVKSVKKENRERHSQRCDIELKLAVAHR 584

Query: 2196 IKDEEGFYYPHNLDFRGRAYPLHPHLNHLGSDVCRGILEFAEGRPLGESGLQWLKIHLAN 2375
            +KDEEGF+YPHN+DFRGRAYP+HPHLNHLGSD+CRG+LEFA GRPLGESGL+WLKIHLAN
Sbjct: 585  MKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAAGRPLGESGLRWLKIHLAN 644

Query: 2376 LYANGVDKLSSEGRITFTESHLDEIFDSADKPLEGQRWWLNAEDPFQCLAVCINLTEALR 2555
            L+A GVDKLS +GRI FTESHLD+IFDSADKPLEG+RWWLNAEDPFQCLAVCINL+EA+R
Sbjct: 645  LFAGGVDKLSLDGRIAFTESHLDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVR 704

Query: 2556 STSPETTISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAREKPADVYSGIASRVLEI 2735
            S+SPET ISH+P+HQDGSCNGLQHYAALGRDKLGAAAVNLVA EKPADVYSGIA+RVL+I
Sbjct: 705  SSSPETVISHVPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDI 764

Query: 2736 MKRDANKDPAIFPDAMRARVLINQIDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDVI 2915
            M RDA +DPA FPDA+RARVL+NQ+DRKLVKQTVMTSVYGVTYIGARDQIKRRLKER  I
Sbjct: 765  MNRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAI 824

Query: 2916 ADDVELFGAACYAAKTTLTALGEMFEAARCIMKWLRECAKIIASENEPVCWTTPLGLPVV 3095
            ADD ELFGAACYAAK TLTALGEMFEAAR IM WL ECAKIIASENEPV WTTPLGLPVV
Sbjct: 825  ADDTELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVV 884

Query: 3096 QPYRQTGRQLIKTSLQVLTLRRETDKVMVKKQITAFPPNFVHSLDSTHMMMTAMACKKAG 3275
            QPYR+ GR  IKTSLQ+LTL+RET+KVMVK+Q TAFPPNF+HSLD +HMMMTA+AC++AG
Sbjct: 885  QPYRKIGRHFIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAG 944

Query: 3276 LNFAGVHDSYWTHACDVDELNRILREKFVELYEMPVLENLLEGFQKSLPSLYFPPLPDRG 3455
            LNFAGVHDSYWTHACDVD+LNRILREKFVELYE P+LE LLEGFQ S P+L FPPLP+RG
Sbjct: 945  LNFAGVHDSYWTHACDVDKLNRILREKFVELYETPILEKLLEGFQVSYPTLSFPPLPERG 1004

Query: 3456 DFDLKDVLTSPYFFN 3500
            DFDL+DV+ SPYFFN
Sbjct: 1005 DFDLRDVIESPYFFN 1019


>XP_004232127.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial [Solanum lycopersicum]
          Length = 1022

 Score = 1381 bits (3575), Expect = 0.0
 Identities = 706/1036 (68%), Positives = 822/1036 (79%), Gaps = 8/1036 (0%)
 Frame = +3

Query: 417  EIPQNPT*KILVMWRNIAIQVXXXXXXXXXXXXNKKVTSYSVFSRYCSFLGLSHDSIFSD 596
            ++  NP     +MWRNI  Q              +K+   S    Y S+LG    S+F D
Sbjct: 19   DLETNPYHISPIMWRNIVKQFSTRTP--------QKILLTSKNHAY-SYLGFGLHSVFKD 69

Query: 597  SFMSRPRNYCSFV----SNDVFPEMGFRKDWIFCSKNRVLRRKNIYCLKHNVNTYGVCHT 764
                  R   SF+    SN  F EMGF+    F   +  LRR  +  +K  V+   +C  
Sbjct: 70   K-----RTLRSFIPVSCSNSGFLEMGFQNLGEFLPGDEFLRRPLLCAMKSQVSNNDICRK 124

Query: 765  SNASVAEEVEGVSNSDVEEMAXXXXXXXXXXXXXXXXXQELLKELRDQEKRSAAKRRRQF 944
            + ASVAE V  VS++D EE                   QELL EL+ +EK+    RRR+ 
Sbjct: 125  NYASVAEAV-AVSSTDAEE-----------DVSVVGEVQELLTELKKEEKKQFTFRRRKQ 172

Query: 945  R-ISSGMGYKKYKALRRRQVKIETEAWEQAANESKELLQDMCRHKLAPNLPYMKSLFLGW 1121
            R ++SG+  +KY AL RRQVKIET+AWEQAA E +ELL DMC  KLAPNLPY+KSLFLGW
Sbjct: 173  RMLTSGIDRRKYPALMRRQVKIETQAWEQAAKEYRELLFDMCEQKLAPNLPYVKSLFLGW 232

Query: 1122 FEPLQAKIAEEQDFCLRGKSKATHAKYFNLLPADKMAVITMHKLMALLMTGTDDHHGDAK 1301
            FEPL+ KIA+EQ+ C++GKSKA ++KYF+LLPAD MAVITMHKLM LLMTG +  HG+ +
Sbjct: 233  FEPLRDKIAQEQELCIQGKSKAAYSKYFHLLPADMMAVITMHKLMGLLMTGGE--HGNVR 290

Query: 1302 VVHAACSIGDAIEQEVRIHNFLEQTKKKNNKFQDGTMMEDGKSSGNAQEHEQQKKAVSGL 1481
            VV AA +IGDAIEQEVRIH FLE+T+K  +K +    MEDG+ +    E ++  K V+ L
Sbjct: 291  VVQAALTIGDAIEQEVRIHKFLEKTEK--HKAEKDRNMEDGEHA--TLEQKKLHKKVTSL 346

Query: 1482 MKKNKLGAVNQILKRQDDAKPWGTEAKAKVGSHLIELLLQTAYIQR-ADEIRDGSPDIRP 1658
            MKK KL AVNQI++ QDD+KPWG +AKAKVGS LIE LLQTAYIQ  AD++    PDIRP
Sbjct: 347  MKKQKLRAVNQIVRSQDDSKPWGQDAKAKVGSRLIEFLLQTAYIQSPADQLAVDPPDIRP 406

Query: 1659 AFVHTFKTAV--SKFASRRYGVIHCDPQILKGLEKTARHMVILYMPMLIPPVKWTGYDKG 1832
            AF+H+ +T    +K ASRRYGVI CD  + KGLE+TARHMVI YMPML+PPVKWTGYDKG
Sbjct: 407  AFIHSTRTLAKETKSASRRYGVIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKG 466

Query: 1833 AHIVLPSYIMRTHGARQQRDVVRRTPRKQLQPVFEALDTIGSTKWRVNKRVLNIIDRIWA 2012
             H+ LPSY+MRTHGARQQR+ V+RT R QLQPVFEALDT+GSTKWR+NKRVL+++DRIWA
Sbjct: 467  GHLYLPSYVMRTHGARQQREAVKRTSRNQLQPVFEALDTLGSTKWRINKRVLSVVDRIWA 526

Query: 2013 SGGRLADLVDREDIPLPEEPDTDDEALLXXXXXXXXXXXXENRERYSQRCDIELKLAVAR 2192
             GGRLADLVDR+D+PLPEEPDT+DEA+             ENRER+SQRCDIELKLAVA 
Sbjct: 527  GGGRLADLVDRDDVPLPEEPDTEDEAVCTKWRWKVKSVKKENRERHSQRCDIELKLAVAH 586

Query: 2193 KIKDEEGFYYPHNLDFRGRAYPLHPHLNHLGSDVCRGILEFAEGRPLGESGLQWLKIHLA 2372
            ++KDEEGF+YPHN+DFRGRAYP+HPHLNHLGSD+CRG+LEFA GRPLG+SGL+WLKIHLA
Sbjct: 587  RMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAAGRPLGKSGLRWLKIHLA 646

Query: 2373 NLYANGVDKLSSEGRITFTESHLDEIFDSADKPLEGQRWWLNAEDPFQCLAVCINLTEAL 2552
            NL+A GVDKLS +GRI FTESHLD+IFDSADKPLEG+ WWLNAEDPFQCLAVCINL+EA+
Sbjct: 647  NLFAGGVDKLSLDGRIAFTESHLDDIFDSADKPLEGRCWWLNAEDPFQCLAVCINLSEAV 706

Query: 2553 RSTSPETTISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAREKPADVYSGIASRVLE 2732
            RS+SPET ISH+P+HQDGSCNGLQHYAALGRDKLGAAAVNLVA EKPADVYSGIA+RVL+
Sbjct: 707  RSSSPETVISHVPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLD 766

Query: 2733 IMKRDANKDPAIFPDAMRARVLINQIDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDV 2912
            IM RDA +DPA FPDA+RARVL+NQ+DRKLVKQTVMTSVYGVTYIGARDQIKRRLKER  
Sbjct: 767  IMNRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGA 826

Query: 2913 IADDVELFGAACYAAKTTLTALGEMFEAARCIMKWLRECAKIIASENEPVCWTTPLGLPV 3092
            IADD ELFGAACYAAK TLTALGEMFEAAR IM WL ECAKIIASENEPV WTTPLGLPV
Sbjct: 827  IADDTELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPV 886

Query: 3093 VQPYRQTGRQLIKTSLQVLTLRRETDKVMVKKQITAFPPNFVHSLDSTHMMMTAMACKKA 3272
            VQPYR+ GR  IKTSLQ+LTL+RET+KVMVK+Q TAFPPNF+HSLD +HMMMTA+AC++A
Sbjct: 887  VQPYRKIGRHFIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRA 946

Query: 3273 GLNFAGVHDSYWTHACDVDELNRILREKFVELYEMPVLENLLEGFQKSLPSLYFPPLPDR 3452
            GLNFAGVHDSYWTHACDVD+LNRILREKFVELYE P+LE LLEGFQ S P+L FPPLP+R
Sbjct: 947  GLNFAGVHDSYWTHACDVDKLNRILREKFVELYETPILEKLLEGFQVSYPTLSFPPLPER 1006

Query: 3453 GDFDLKDVLTSPYFFN 3500
            GDFDL+DV+ SPYFFN
Sbjct: 1007 GDFDLRDVIESPYFFN 1022


>XP_016445194.1 PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Nicotiana tabacum]
          Length = 1020

 Score = 1380 bits (3573), Expect = 0.0
 Identities = 712/1028 (69%), Positives = 819/1028 (79%), Gaps = 4/1028 (0%)
 Frame = +3

Query: 429  NPT*KILVMWRNIAIQVXXXXXXXXXXXXNKKVTSYSVFSRYCSFLGLSHDSIFSDSFMS 608
            NP     +MWRNI  Q+              +   +S  +R  SFLG   DS+F D+   
Sbjct: 27   NPYHNSPIMWRNIIKQLSSR---------TPQKLLFSSKNRTYSFLGFGQDSVFKDNTKF 77

Query: 609  RPRNYCSFVSNDVFPEMGFRKDWIFCSKNRVLRRKNIYCLKHNVNTYGVCHTSNASVAEE 788
            R     S  SN V   MGF+    +   +  L R  I   K+ VN       S ASVAE 
Sbjct: 78   RSLIPIS-CSNIV---MGFQNLGEYLPGDEFLSRPLI---KNQVNNNFCWRKSYASVAEA 130

Query: 789  VEGVSNSDVEEMAXXXXXXXXXXXXXXXXXQELLKELRDQEKRSAAKRRRQFR-ISSGMG 965
            V  VS++D EE                    ELL EL+ +EK+  A RRR+ R ++SGMG
Sbjct: 131  V-AVSSTDAEE-----------DVSVVDEVHELLTELKKEEKKQFAFRRRKQRMLTSGMG 178

Query: 966  YKKYKALRRRQVKIETEAWEQAANESKELLQDMCRHKLAPNLPYMKSLFLGWFEPLQAKI 1145
            ++KY+ L+RRQVK+ETEAWEQAA E KELL DMC  KLAPNLPY+KSLFLGWFEPL+ KI
Sbjct: 179  HRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKI 238

Query: 1146 AEEQDFCLRGKSKATHAKYFNLLPADKMAVITMHKLMALLMTGTDDHHGDAKVVHAACSI 1325
            AEEQ+ C +GKSKA +AKYF  LPAD MAVITMHKLM LLMTG D  HG A+VV AA  I
Sbjct: 239  AEEQELCSQGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGD--HGTARVVQAALVI 296

Query: 1326 GDAIEQEVRIHNFLEQTKKKNNKFQDGTMMEDGKSSGNAQEHEQQKKAVSGLMKKNKLGA 1505
            GDAIEQEVRIHNFLE+TKK+  K +     EDG+     QE E+ +K V+ LMKK KL A
Sbjct: 297  GDAIEQEVRIHNFLEKTKKQ--KAEKDKQKEDGEHV--TQEQEKLRKKVTNLMKKQKLRA 352

Query: 1506 VNQILKRQDDAKPWGTEAKAKVGSHLIELLLQTAYIQR-ADEIRDGSPDIRPAFVHTFKT 1682
            V QI++RQDD+KPWG +A+AKVGS LI+LLLQTAYIQ  A+++    PDIRPAFVH+ +T
Sbjct: 353  VGQIVRRQDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDIRPAFVHSVRT 412

Query: 1683 AV--SKFASRRYGVIHCDPQILKGLEKTARHMVILYMPMLIPPVKWTGYDKGAHIVLPSY 1856
                +K ASRRYG+I CD  + KGLE+TARHMVI YMPML+PPVKWTGYDKG H+ LPSY
Sbjct: 413  VAKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSY 472

Query: 1857 IMRTHGARQQRDVVRRTPRKQLQPVFEALDTIGSTKWRVNKRVLNIIDRIWASGGRLADL 2036
            +MRTHGARQQR+ V+R  R QLQPVFEALDT+G+TKWR+NKRVL+++DRIWA GGRLADL
Sbjct: 473  VMRTHGARQQREAVKRASRNQLQPVFEALDTLGNTKWRINKRVLSVVDRIWAGGGRLADL 532

Query: 2037 VDREDIPLPEEPDTDDEALLXXXXXXXXXXXXENRERYSQRCDIELKLAVARKIKDEEGF 2216
            VDR+D PLPEEPDT+DEAL             ENRER+SQRCDIELKLAVARK+KDEE F
Sbjct: 533  VDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEESF 592

Query: 2217 YYPHNLDFRGRAYPLHPHLNHLGSDVCRGILEFAEGRPLGESGLQWLKIHLANLYANGVD 2396
            +YPHN+DFRGRAYP+HPHLNHLGSD+CRG+LEFAEGRPLG SGL+WLKIHLANL+A GV+
Sbjct: 593  FYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAEGRPLGVSGLRWLKIHLANLFAGGVE 652

Query: 2397 KLSSEGRITFTESHLDEIFDSADKPLEGQRWWLNAEDPFQCLAVCINLTEALRSTSPETT 2576
            KLS EGRI FTE+H+D+IFDSADKPLEG+RWWLNAEDPFQCLAVCINL+EA+RS+SPET+
Sbjct: 653  KLSLEGRIGFTENHMDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETS 712

Query: 2577 ISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAREKPADVYSGIASRVLEIMKRDANK 2756
            +SHIP+HQDGSCNGLQHYAALGRDKLGAAAVNLVA EKPADVYSGIA+RVL+IMKRDA +
Sbjct: 713  VSHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQR 772

Query: 2757 DPAIFPDAMRARVLINQIDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDVIADDVELF 2936
            DPA FPDA+RARVL+NQ+DRKLVKQTVMTSVYGVTYIGARDQIKRRLKER  IADD ELF
Sbjct: 773  DPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELF 832

Query: 2937 GAACYAAKTTLTALGEMFEAARCIMKWLRECAKIIASENEPVCWTTPLGLPVVQPYRQTG 3116
            GAACYAAK TLTALGEMFEAAR IM WL ECAKIIASENEPV WTTPLGLPVVQPYR+ G
Sbjct: 833  GAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIG 892

Query: 3117 RQLIKTSLQVLTLRRETDKVMVKKQITAFPPNFVHSLDSTHMMMTAMACKKAGLNFAGVH 3296
            R LIKTSLQ+LTL+RET+KVMVK+Q TAFPPNF+HSLD +HMMMTA+AC++AGLNFAGVH
Sbjct: 893  RHLIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVH 952

Query: 3297 DSYWTHACDVDELNRILREKFVELYEMPVLENLLEGFQKSLPSLYFPPLPDRGDFDLKDV 3476
            DSYWTHACDVD+LNRILREKFVELYE P+LE LLE FQ S P+L FPPLP+RGDFD++DV
Sbjct: 953  DSYWTHACDVDKLNRILREKFVELYEAPILEKLLESFQTSYPTLLFPPLPERGDFDMRDV 1012

Query: 3477 LTSPYFFN 3500
            L SPYFFN
Sbjct: 1013 LESPYFFN 1020


>XP_006338320.1 PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Solanum tuberosum]
          Length = 1019

 Score = 1378 bits (3566), Expect = 0.0
 Identities = 708/1032 (68%), Positives = 819/1032 (79%), Gaps = 8/1032 (0%)
 Frame = +3

Query: 429  NPT*KILVMWRNIAIQVXXXXXXXXXXXXNKKVTSYSVFSRYCSFLGLSHDSIFSDSFMS 608
            NP     +MWRNI  Q              +K+   S    Y SFLG   DS+F D  + 
Sbjct: 23   NPYQNSPIMWRNIVKQFSSRTP--------QKILLTSKNRTY-SFLGFGQDSVFKDKRIL 73

Query: 609  RPRNYCSFV----SNDVFPEMGFRKDWIFCSKNRVLRRKNIYCLKHNVNTYGVCHTSNAS 776
            R     SF+    SN  F EMGF+    F   +  LRR  +  +K  V+   +C  S AS
Sbjct: 74   R-----SFIPVSCSNSGFLEMGFQNLGEF---DEFLRRPLLCAMKSQVSNNDICRKSYAS 125

Query: 777  VAEEVEGVSNSDVEEMAXXXXXXXXXXXXXXXXXQELLKELRDQEKRSAAKRRRQFRI-S 953
            VAE V  VS++D EE                   QELL EL+ +EK+    RRR  R+ +
Sbjct: 126  VAEAV-AVSSTDAEE-----------DVSVVGEVQELLTELKKEEKKQFTFRRRNQRLLT 173

Query: 954  SGMGYKKYKALRRRQVKIETEAWEQAANESKELLQDMCRHKLAPNLPYMKSLFLGWFEPL 1133
            SG+  +KY AL+RRQVKIET+AWE AA E +ELL DMC  KLAPNLPY+KSLFLGWFEPL
Sbjct: 174  SGIDRRKYPALKRRQVKIETQAWELAAKEYRELLFDMCEQKLAPNLPYVKSLFLGWFEPL 233

Query: 1134 QAKIAEEQDFCLRGKSKATHAKYFNLLPADKMAVITMHKLMALLMTGTDDHHGDAKVVHA 1313
            + KIA+EQ+ C++GKSKA ++KYF+LLPAD MAVITMHKLM LLMTG +  HG+A+VV A
Sbjct: 234  RDKIAQEQELCIQGKSKAAYSKYFHLLPADMMAVITMHKLMGLLMTGGE--HGNARVVQA 291

Query: 1314 ACSIGDAIEQEVRIHNFLEQTKKKNNKFQDGTMMEDGKSSGNAQEHEQQKKAVSGLMKKN 1493
            A +IGDAIEQEVRIH FLE+T+K  +K +    MEDG+ +    E ++  K V+ LMKK 
Sbjct: 292  ALTIGDAIEQEVRIHKFLEKTEK--HKAEKDRKMEDGEHA--TLEQKKLHKKVTSLMKKQ 347

Query: 1494 KLGAVNQILKRQDDAKPWGTEAKAKVGSHLIELLLQTAYIQR-ADEIRDGSPDIRPAFVH 1670
            KL AVNQI++ QDD+KPWG +AKAKVGS LIE LLQTAYIQ  AD++    PDIRPAF+H
Sbjct: 348  KLRAVNQIVRSQDDSKPWGQDAKAKVGSRLIEFLLQTAYIQSPADQLAVDPPDIRPAFIH 407

Query: 1671 TFKTAV--SKFASRRYGVIHCDPQILKGLEKTARHMVILYMPMLIPPVKWTGYDKGAHIV 1844
            + +T    +K ASRRYGVI CD  + KGLE+TARHMVI YMPML+PPVKWTGYDKG H+ 
Sbjct: 408  STRTVAKETKSASRRYGVIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLY 467

Query: 1845 LPSYIMRTHGARQQRDVVRRTPRKQLQPVFEALDTIGSTKWRVNKRVLNIIDRIWASGGR 2024
            LPSY+MRTHGARQQR+ V+R  R QL+PVFEALDT+GSTKWR+NKRVL+++DRIWA GGR
Sbjct: 468  LPSYVMRTHGARQQREAVKRASRNQLRPVFEALDTLGSTKWRINKRVLSVVDRIWAGGGR 527

Query: 2025 LADLVDREDIPLPEEPDTDDEALLXXXXXXXXXXXXENRERYSQRCDIELKLAVARKIKD 2204
            LADLVDR+D PLPEEPDT+DEA+             ENRER+SQRCDIELKLAVA ++KD
Sbjct: 528  LADLVDRDDAPLPEEPDTEDEAVCTKWRWKVKSVKKENRERHSQRCDIELKLAVAHRMKD 587

Query: 2205 EEGFYYPHNLDFRGRAYPLHPHLNHLGSDVCRGILEFAEGRPLGESGLQWLKIHLANLYA 2384
            EEGF+YPHN+DFRGRAYP+HPHLNHLGSD+CRG+LEFA GRPLGESGL+WLKIHLANL+A
Sbjct: 588  EEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAAGRPLGESGLRWLKIHLANLFA 647

Query: 2385 NGVDKLSSEGRITFTESHLDEIFDSADKPLEGQRWWLNAEDPFQCLAVCINLTEALRSTS 2564
             GVDKLS +GRI FTESHLD+IFDSADKPLEG+RWWLNAEDPFQCLAVCINL+EA+RS+S
Sbjct: 648  GGVDKLSLDGRIAFTESHLDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSS 707

Query: 2565 PETTISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAREKPADVYSGIASRVLEIMKR 2744
            PET ISHIP+HQDGSCNGLQHYAALGRDKLGAAAVNLVA EKPADVYSGIA+RVL+IM R
Sbjct: 708  PETVISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMNR 767

Query: 2745 DANKDPAIFPDAMRARVLINQIDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDVIADD 2924
            DA +DPA FPDA+RARVL+NQ+DRKLVKQTVMTSVYGVTYIGARDQIKRRLKER  IADD
Sbjct: 768  DAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADD 827

Query: 2925 VELFGAACYAAKTTLTALGEMFEAARCIMKWLRECAKIIASENEPVCWTTPLGLPVVQPY 3104
             ELFGAA YAAK TLTALGEMFEAAR IM WL ECAKIIASENEPV WTTPLGLPVVQPY
Sbjct: 828  SELFGAASYAAKVTLTALGEMFEAARSIMTWLAECAKIIASENEPVRWTTPLGLPVVQPY 887

Query: 3105 RQTGRQLIKTSLQVLTLRRETDKVMVKKQITAFPPNFVHSLDSTHMMMTAMACKKAGLNF 3284
            R+ GR  IKTSLQ+LTL+RET+KVMVK+Q TAFPPNF+HSLD +HMMMTA+AC++AGLNF
Sbjct: 888  RKIGRHFIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNF 947

Query: 3285 AGVHDSYWTHACDVDELNRILREKFVELYEMPVLENLLEGFQKSLPSLYFPPLPDRGDFD 3464
            AGVHDSYWTHACDVD+LNRILREKFVELYE P+LE LLE FQ S P+L FPPLP+RGDFD
Sbjct: 948  AGVHDSYWTHACDVDKLNRILREKFVELYETPILEKLLESFQVSYPTLSFPPLPERGDFD 1007

Query: 3465 LKDVLTSPYFFN 3500
            L+DV+ SPYFFN
Sbjct: 1008 LRDVIESPYFFN 1019


>XP_017975629.1 PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            isoform X2 [Theobroma cacao]
          Length = 1032

 Score = 1377 bits (3564), Expect = 0.0
 Identities = 696/1031 (67%), Positives = 818/1031 (79%), Gaps = 6/1031 (0%)
 Frame = +3

Query: 426  QNPT*KILVMWRNIAIQVXXXXXXXXXXXXNKKVTSYSVFSRYCSFLGLSHDSIFSDSFM 605
            QNP    +VMWRNIA               +++  S+  F+R  SFLG S DSIF +   
Sbjct: 33   QNPPKISIVMWRNIAKHAI-----------SRRTHSFQCFARTYSFLGTSQDSIFHEKSK 81

Query: 606  SRPRNYCSFVSNDVFPEMGFRKDWIFCSKNRVLRRKNIYCLKHNVNTYGVCHTSNASVAE 785
             R   + SF SN  F +MG R+     +    + +++    ++ +   G+C     SVAE
Sbjct: 82   FRGLKFGSFCSNSRFLDMGGRRIGEVLTNVEYIGKQSFGFPRNEIGCSGLCPRGYVSVAE 141

Query: 786  EVEGVSNSDVEEMAXXXXXXXXXXXXXXXXXQELLKELRDQEKRSAAKRRRQFRI-SSGM 962
                VS++DVEE                   +ELL E++ +++R    RRR+ +I   GM
Sbjct: 142  ---AVSSTDVEE-----------DVSVVEEIKELLDEMKKEQRRETGNRRRRCQIIERGM 187

Query: 963  GYKKYKALRRRQVKIETEAWEQAANESKELLQDMCRHKLAPNLPYMKSLFLGWFEPLQAK 1142
            G  KY+ LRRRQVKIETEAWEQAA E +ELL DMC HKLAPNLPY+KSLFLGWFEPL+  
Sbjct: 188  GESKYRFLRRRQVKIETEAWEQAAKEYRELLMDMCEHKLAPNLPYIKSLFLGWFEPLRDA 247

Query: 1143 IAEEQDFCLRGKSKATHAKYFNLLPADKMAVITMHKLMALLMTGTDDHHGDAKVVHAACS 1322
            I +EQ+    GK +A +A Y + LPAD  AVITMHKLM LLMTG +  HG A+VV AAC 
Sbjct: 248  IIKEQELYRLGKLRAGYAGYLDQLPADMTAVITMHKLMGLLMTGGE--HGCARVVQAACL 305

Query: 1323 IGDAIEQEVRIHNFLEQTKKK--NNKFQDGTMMEDGKSSGNAQEHEQQKKAVSGLMKKNK 1496
            IGDAIEQEVRIH FLE+TKKK  + K +D    E  K +   +E E+ +K V+ L+KK K
Sbjct: 306  IGDAIEQEVRIHKFLEKTKKKRVDKKNED----EGDKPNAEIKEQEKLRKKVTDLIKKQK 361

Query: 1497 LGAVNQILKRQDDAKPWGTEAKAKVGSHLIELLLQTAYIQR-ADEIRDGSPDIRPAFVHT 1673
            L AV QI+K QDD KPWG +AKAKVGSHLIELL+QTAYIQ  AD++ D  PD+RPAFVH+
Sbjct: 362  LPAVRQIVKGQDDTKPWGQDAKAKVGSHLIELLMQTAYIQPPADQLADCPPDVRPAFVHS 421

Query: 1674 FKTAV--SKFASRRYGVIHCDPQILKGLEKTARHMVILYMPMLIPPVKWTGYDKGAHIVL 1847
             +T V  +K   RRYGVI C+P + KGLE+TARHMVI YMPML+PPVKWTGYD+GA++ +
Sbjct: 422  LRTVVKENKKTGRRYGVIECNPLVRKGLERTARHMVIPYMPMLVPPVKWTGYDRGAYLFI 481

Query: 1848 PSYIMRTHGARQQRDVVRRTPRKQLQPVFEALDTIGSTKWRVNKRVLNIIDRIWASGGRL 2027
            PSYIMRTHG +QQR+ V+RTPRKQL+PVFEALDT+G TKWRVNKRVLN++DRIW SGGRL
Sbjct: 482  PSYIMRTHGVKQQREAVKRTPRKQLEPVFEALDTLGCTKWRVNKRVLNVVDRIWTSGGRL 541

Query: 2028 ADLVDREDIPLPEEPDTDDEALLXXXXXXXXXXXXENRERYSQRCDIELKLAVARKIKDE 2207
            ADLVDR+D+PLPE+PD++DEA+L            ENRER+S RCD+ELKLAVARK+KDE
Sbjct: 542  ADLVDRKDVPLPEKPDSEDEAVLRKWKWKVRSVKKENRERHSLRCDVELKLAVARKMKDE 601

Query: 2208 EGFYYPHNLDFRGRAYPLHPHLNHLGSDVCRGILEFAEGRPLGESGLQWLKIHLANLYAN 2387
            EGFYYPHNLDFRGRAYP+HP+LNHLGSD+CRGILEF EGRPLG+SGL+WLKIHLANLYA 
Sbjct: 602  EGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLRWLKIHLANLYAG 661

Query: 2388 GVDKLSSEGRITFTESHLDEIFDSADKPLEGQRWWLNAEDPFQCLAVCINLTEALRSTSP 2567
            GVDKLS EGR+ FTE+HLD+IFDSAD+PLEG+RWWL AEDPFQCLAVCINL EALRS+SP
Sbjct: 662  GVDKLSHEGRLAFTENHLDDIFDSADRPLEGKRWWLKAEDPFQCLAVCINLAEALRSSSP 721

Query: 2568 ETTISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAREKPADVYSGIASRVLEIMKRD 2747
            ET +SHIP+HQDGSCNGLQHYAALGRDKLGAA+VNLVA EKPADVYSGIA+RVL+I++RD
Sbjct: 722  ETFVSHIPVHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIAARVLDIIRRD 781

Query: 2748 ANKDPAIFPDAMRARVLINQIDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDVIADDV 2927
            A KDPA+FPDA+ A+VL+NQ+DRKLVKQTVMTSVYGVTYIGARDQIKRRLKER VI DD 
Sbjct: 782  AQKDPAVFPDALHAKVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVITDDK 841

Query: 2928 ELFGAACYAAKTTLTALGEMFEAARCIMKWLRECAKIIASENEPVCWTTPLGLPVVQPYR 3107
            E+FGA+CYAAKTTLTALGEMF+AAR IM WL ECAKIIASEN+PV WTTPLGLPVVQPYR
Sbjct: 842  EIFGASCYAAKTTLTALGEMFQAARAIMNWLGECAKIIASENQPVRWTTPLGLPVVQPYR 901

Query: 3108 QTGRQLIKTSLQVLTLRRETDKVMVKKQITAFPPNFVHSLDSTHMMMTAMACKKAGLNFA 3287
              GR LIKTSLQVLTL+RET+KVMVK+Q TAFPPNFVHSLD +HMMMTA+ACKKAGL FA
Sbjct: 902  VLGRHLIKTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLTFA 961

Query: 3288 GVHDSYWTHACDVDELNRILREKFVELYEMPVLENLLEGFQKSLPSLYFPPLPDRGDFDL 3467
            GVHDSYWTHA DVD++NRILRE FVELYE+P+LENLLE FQ+S P+L FPPLP+RGDFDL
Sbjct: 962  GVHDSYWTHASDVDKMNRILRENFVELYEVPILENLLESFQQSFPTLCFPPLPERGDFDL 1021

Query: 3468 KDVLTSPYFFN 3500
            +DVL SPYFFN
Sbjct: 1022 RDVLESPYFFN 1032


>XP_017975628.1 PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            isoform X1 [Theobroma cacao]
          Length = 1033

 Score = 1372 bits (3552), Expect = 0.0
 Identities = 696/1032 (67%), Positives = 818/1032 (79%), Gaps = 7/1032 (0%)
 Frame = +3

Query: 426  QNPT*KILVMWRNIAIQVXXXXXXXXXXXXNKKVTSYSVFSRYCSFLGLSHDSIFSDSFM 605
            QNP    +VMWRNIA               +++  S+  F+R  SFLG S DSIF +   
Sbjct: 33   QNPPKISIVMWRNIAKHAI-----------SRRTHSFQCFARTYSFLGTSQDSIFHEKSK 81

Query: 606  SRPRNYCSFVSNDVFPEMGFRKDWIFCSKNRVLRRKNIYCLKHNVNTYGVCHTSNASVAE 785
             R   + SF SN  F +MG R+     +    + +++    ++ +   G+C     SVAE
Sbjct: 82   FRGLKFGSFCSNSRFLDMGGRRIGEVLTNVEYIGKQSFGFPRNEIGCSGLCPRGYVSVAE 141

Query: 786  EVEGVSNSDVEEMAXXXXXXXXXXXXXXXXXQELLKELRDQEKRSAAKRRRQFRI-SSGM 962
                VS++DVEE                   +ELL E++ +++R    RRR+ +I   GM
Sbjct: 142  ---AVSSTDVEE-----------DVSVVEEIKELLDEMKKEQRRETGNRRRRCQIIERGM 187

Query: 963  GYKKYKALRRRQVKIETEAWEQAANESKELLQDMCRHKLAPNLPYMKSLFLGWFEPLQAK 1142
            G  KY+ LRRRQVKIETEAWEQAA E +ELL DMC HKLAPNLPY+KSLFLGWFEPL+  
Sbjct: 188  GESKYRFLRRRQVKIETEAWEQAAKEYRELLMDMCEHKLAPNLPYIKSLFLGWFEPLRDA 247

Query: 1143 IAEEQDFCLRGKSKATHAKYFNLLPADKMAVITMHKLMALLMTGTDDHHGDAKVVHAACS 1322
            I +EQ+    GK +A +A Y + LPAD  AVITMHKLM LLMTG +  HG A+VV AAC 
Sbjct: 248  IIKEQELYRLGKLRAGYAGYLDQLPADMTAVITMHKLMGLLMTGGE--HGCARVVQAACL 305

Query: 1323 IGDAIEQEVRIHNFLEQTKKK--NNKFQDGTMMEDGKSSGNAQEHEQQKKAVSGLMKKNK 1496
            IGDAIEQEVRIH FLE+TKKK  + K +D    E  K +   +E E+ +K V+ L+KK K
Sbjct: 306  IGDAIEQEVRIHKFLEKTKKKRVDKKNED----EGDKPNAEIKEQEKLRKKVTDLIKKQK 361

Query: 1497 LGAVNQILKRQDDAKPWGTEAKAKVGSHLIELLLQTAYIQR-ADEIRDGSPDIRPAFVHT 1673
            L AV QI+K QDD KPWG +AKAKVGSHLIELL+QTAYIQ  AD++ D  PD+RPAFVH+
Sbjct: 362  LPAVRQIVKGQDDTKPWGQDAKAKVGSHLIELLMQTAYIQPPADQLADCPPDVRPAFVHS 421

Query: 1674 FKTAV--SKFASRRYGVIHCDPQILKGLEKTARHMVILYMPMLIPPVKWTGYDKGAHIVL 1847
             +T V  +K   RRYGVI C+P + KGLE+TARHMVI YMPML+PPVKWTGYD+GA++ +
Sbjct: 422  LRTVVKENKKTGRRYGVIECNPLVRKGLERTARHMVIPYMPMLVPPVKWTGYDRGAYLFI 481

Query: 1848 PSYIMRTHGARQQRDVVRRTPRKQLQPVFEALDTIGSTKWRVNKRVLNIIDRIWASGGRL 2027
            PSYIMRTHG +QQR+ V+RTPRKQL+PVFEALDT+G TKWRVNKRVLN++DRIW SGGRL
Sbjct: 482  PSYIMRTHGVKQQREAVKRTPRKQLEPVFEALDTLGCTKWRVNKRVLNVVDRIWTSGGRL 541

Query: 2028 ADLVDREDIPLPEEPDTDDEALLXXXXXXXXXXXXENRERYSQRCDIELKLA-VARKIKD 2204
            ADLVDR+D+PLPE+PD++DEA+L            ENRER+S RCD+ELKLA VARK+KD
Sbjct: 542  ADLVDRKDVPLPEKPDSEDEAVLRKWKWKVRSVKKENRERHSLRCDVELKLAQVARKMKD 601

Query: 2205 EEGFYYPHNLDFRGRAYPLHPHLNHLGSDVCRGILEFAEGRPLGESGLQWLKIHLANLYA 2384
            EEGFYYPHNLDFRGRAYP+HP+LNHLGSD+CRGILEF EGRPLG+SGL+WLKIHLANLYA
Sbjct: 602  EEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLRWLKIHLANLYA 661

Query: 2385 NGVDKLSSEGRITFTESHLDEIFDSADKPLEGQRWWLNAEDPFQCLAVCINLTEALRSTS 2564
             GVDKLS EGR+ FTE+HLD+IFDSAD+PLEG+RWWL AEDPFQCLAVCINL EALRS+S
Sbjct: 662  GGVDKLSHEGRLAFTENHLDDIFDSADRPLEGKRWWLKAEDPFQCLAVCINLAEALRSSS 721

Query: 2565 PETTISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAREKPADVYSGIASRVLEIMKR 2744
            PET +SHIP+HQDGSCNGLQHYAALGRDKLGAA+VNLVA EKPADVYSGIA+RVL+I++R
Sbjct: 722  PETFVSHIPVHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIAARVLDIIRR 781

Query: 2745 DANKDPAIFPDAMRARVLINQIDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDVIADD 2924
            DA KDPA+FPDA+ A+VL+NQ+DRKLVKQTVMTSVYGVTYIGARDQIKRRLKER VI DD
Sbjct: 782  DAQKDPAVFPDALHAKVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVITDD 841

Query: 2925 VELFGAACYAAKTTLTALGEMFEAARCIMKWLRECAKIIASENEPVCWTTPLGLPVVQPY 3104
             E+FGA+CYAAKTTLTALGEMF+AAR IM WL ECAKIIASEN+PV WTTPLGLPVVQPY
Sbjct: 842  KEIFGASCYAAKTTLTALGEMFQAARAIMNWLGECAKIIASENQPVRWTTPLGLPVVQPY 901

Query: 3105 RQTGRQLIKTSLQVLTLRRETDKVMVKKQITAFPPNFVHSLDSTHMMMTAMACKKAGLNF 3284
            R  GR LIKTSLQVLTL+RET+KVMVK+Q TAFPPNFVHSLD +HMMMTA+ACKKAGL F
Sbjct: 902  RVLGRHLIKTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLTF 961

Query: 3285 AGVHDSYWTHACDVDELNRILREKFVELYEMPVLENLLEGFQKSLPSLYFPPLPDRGDFD 3464
            AGVHDSYWTHA DVD++NRILRE FVELYE+P+LENLLE FQ+S P+L FPPLP+RGDFD
Sbjct: 962  AGVHDSYWTHASDVDKMNRILRENFVELYEVPILENLLESFQQSFPTLCFPPLPERGDFD 1021

Query: 3465 LKDVLTSPYFFN 3500
            L+DVL SPYFFN
Sbjct: 1022 LRDVLESPYFFN 1033


>XP_010660553.1 PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera] CBI16911.3 unnamed protein product,
            partial [Vitis vinifera]
          Length = 1035

 Score = 1369 bits (3544), Expect = 0.0
 Identities = 699/1029 (67%), Positives = 809/1029 (78%), Gaps = 5/1029 (0%)
 Frame = +3

Query: 429  NPT*KILVMWRNIAIQVXXXXXXXXXXXXNKKVTSYSVFSRYCSFLGLSHDSIFSDSFMS 608
            NP  K  VMWRNIA +             ++ +      SR  SFLG S D IF +  M 
Sbjct: 32   NPLKKPTVMWRNIAKRAIPRAPRKCVYLDSQPL------SRRYSFLGFSQDLIFPE-IMK 84

Query: 609  RPRNYCSFVSNDVFPEMGFRKDWIFCSKNRVLRRKNIYCLKHNVNTYGVCHTSNASVAEE 788
                  S  S+  F EMGFR+     S+   + R +  CL++ +   G C  S ASVAE 
Sbjct: 85   FGTFEPSSCSSSGFSEMGFRRIGEISSREDAVGRPSFGCLRNQMGFSGFCPKSYASVAE- 143

Query: 789  VEGVSNSDVEEMAXXXXXXXXXXXXXXXXXQELLKELRDQEKRSAA-KRRRQFRISSGMG 965
               VS++DVEE                   QELL E++ +EKR    KRR + ++  GM 
Sbjct: 144  --AVSSTDVEE-----------DVSASDEIQELLGEMKKEEKRQVNFKRREKLKMERGME 190

Query: 966  YKKYKALRRRQVKIETEAWEQAANESKELLQDMCRHKLAPNLPYMKSLFLGWFEPLQAKI 1145
              +Y  LRRRQVKIETEAWE AA E KELL DMC  KLAPNLPYMKSLFLGWFEPL+  I
Sbjct: 191  QGRYLRLRRRQVKIETEAWELAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAI 250

Query: 1146 AEEQDFCLRGKSKATHAKYFNLLPADKMAVITMHKLMALLMTGTDDHHGDAKVVHAACSI 1325
             +EQ+ C  GK+KA +A YF+ LPAD M+VITMHKL+ LLMTG +  HG  +VV AAC I
Sbjct: 251  VKEQELCRLGKNKAAYAPYFDQLPADMMSVITMHKLVGLLMTGGE--HGSTRVVQAACVI 308

Query: 1326 GDAIEQEVRIHNFLEQTKKKNNKFQDGTMMEDGKSSGNAQEHEQQKKAVSGLMKKNKLGA 1505
            GDAIEQEVRIHNFLE+TK+K  K      +E G       E E+ +K V+ LMKK KL A
Sbjct: 309  GDAIEQEVRIHNFLEKTKRK--KVGKDKNVEGGGFDPVIHEQEKLRKKVTNLMKKQKLHA 366

Query: 1506 VNQILKRQDDAKPWGTEAKAKVGSHLIELLLQTAYIQRA--DEIRDGSPDIRPAFVHTFK 1679
              QI+K  D++KPWG EAKAKVGS LIELL+QTAYIQ    +++ D  PDIRPAFVHTFK
Sbjct: 367  ARQIVKGHDNSKPWGPEAKAKVGSRLIELLMQTAYIQPPVDNQLADTPPDIRPAFVHTFK 426

Query: 1680 TAV--SKFASRRYGVIHCDPQILKGLEKTARHMVILYMPMLIPPVKWTGYDKGAHIVLPS 1853
            T +  +K   RR+GVI CDP + KGLE+TARHMVI Y+PML+PP+KWTGYDKGAH+ LPS
Sbjct: 427  TVMREAKKIGRRFGVIECDPLVKKGLERTARHMVIPYVPMLVPPLKWTGYDKGAHLFLPS 486

Query: 1854 YIMRTHGARQQRDVVRRTPRKQLQPVFEALDTIGSTKWRVNKRVLNIIDRIWASGGRLAD 2033
            Y+MRTHGARQQR+ V+R PR QL+PVFEAL+T+G+TKWR+NKR+ +++DRIWA GG LAD
Sbjct: 487  YVMRTHGARQQREAVKRAPRNQLEPVFEALNTLGNTKWRINKRLFDVVDRIWAGGGCLAD 546

Query: 2034 LVDREDIPLPEEPDTDDEALLXXXXXXXXXXXXENRERYSQRCDIELKLAVARKIKDEEG 2213
            LVDR D+PLPE+PDT+DEA L             N ER+SQRCDIELKLAVARK+KDE+G
Sbjct: 547  LVDRNDVPLPEKPDTEDEAQLRKWKWKVKSVKKANSERHSQRCDIELKLAVARKMKDEDG 606

Query: 2214 FYYPHNLDFRGRAYPLHPHLNHLGSDVCRGILEFAEGRPLGESGLQWLKIHLANLYANGV 2393
            F+YPHNLDFRGRAYP+HP+LNHLGSD+CRGILEFAEGRPLG SGL WLKIHLANL+A GV
Sbjct: 607  FFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGSSGLHWLKIHLANLFAGGV 666

Query: 2394 DKLSSEGRITFTESHLDEIFDSADKPLEGQRWWLNAEDPFQCLAVCINLTEALRSTSPET 2573
            DKLS EGRITFTE+HLD+IFDSAD+PLEG+RWWLNAEDPFQ LA CINL+EALRS+SPET
Sbjct: 667  DKLSHEGRITFTENHLDDIFDSADRPLEGKRWWLNAEDPFQFLAACINLSEALRSSSPET 726

Query: 2574 TISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAREKPADVYSGIASRVLEIMKRDAN 2753
            TISHIP+HQDGSCNGLQHYAALGRD+LGA AVNLVA EKPADVYSGIA+RVL+IMKRDA 
Sbjct: 727  TISHIPVHQDGSCNGLQHYAALGRDQLGATAVNLVAGEKPADVYSGIAARVLDIMKRDAE 786

Query: 2754 KDPAIFPDAMRARVLINQIDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDVIADDVEL 2933
            KDPAIFPDA+RAR+LINQ+DRKLVKQTVMTSVYGVTYIGARDQIKRRLKER+ IADDVEL
Sbjct: 787  KDPAIFPDALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNAIADDVEL 846

Query: 2934 FGAACYAAKTTLTALGEMFEAARCIMKWLRECAKIIASENEPVCWTTPLGLPVVQPYRQT 3113
            FGAACYAAK TLTALGEMF+AAR IM WL +CAKIIASEN+PV WTTPLGLPVVQPYR+ 
Sbjct: 847  FGAACYAAKITLTALGEMFQAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKL 906

Query: 3114 GRQLIKTSLQVLTLRRETDKVMVKKQITAFPPNFVHSLDSTHMMMTAMACKKAGLNFAGV 3293
            GR LIKTSLQVLTL+RET+ +MVK+Q TAFPPNFVHSLD +HMMMTA+ACKKAGLNFAGV
Sbjct: 907  GRHLIKTSLQVLTLQRETETIMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGV 966

Query: 3294 HDSYWTHACDVDELNRILREKFVELYEMPVLENLLEGFQKSLPSLYFPPLPDRGDFDLKD 3473
            HDSYWTHACDVDE+NR+LREKFV+LYE P+LENLLE FQ+S P+L FPPLP+RGDFDL++
Sbjct: 967  HDSYWTHACDVDEMNRLLREKFVQLYETPILENLLESFQQSFPALEFPPLPERGDFDLRE 1026

Query: 3474 VLTSPYFFN 3500
            VL SPYFFN
Sbjct: 1027 VLESPYFFN 1035


>XP_019185406.1 PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Ipomoea nil]
          Length = 1034

 Score = 1357 bits (3513), Expect = 0.0
 Identities = 691/1020 (67%), Positives = 800/1020 (78%), Gaps = 4/1020 (0%)
 Frame = +3

Query: 453  MWRNIAIQVXXXXXXXXXXXXNKKVTSYSVFSRYCSFLGLSHDSIFSDSFMSRPRNYCSF 632
            MWRNIA Q+            N K    S ++R  SFL     S F +  +         
Sbjct: 35   MWRNIAKQISSKALQKHNLSLNPK----SRYNRTSSFLSFPQGSNFPEKLVQFSPFDPVP 90

Query: 633  VSNDVFPEMGFRKDWIFCSKNRVLRRKNIYCLKHNVNTYGVCHTSNASVAEEVEGVSNSD 812
             SN+   E GFRK   F  ++  L R  ++ L  +    G    S ASVAE VE +S+  
Sbjct: 91   CSNNGSTEFGFRKFGEFLPRDEFLSRPVLHSLMSSGYISGFSWKSYASVAEAVEVLSSEA 150

Query: 813  VEEMAXXXXXXXXXXXXXXXXXQELLKELRDQEKRSA-AKRRRQFRISSGMGYKKYKALR 989
             E ++                 +ELL E+R +E++    + R++ R+S GMG  KY+AL+
Sbjct: 151  EENVSVTDEV------------EELLTEMRREERKQFYCEWRKRQRVSRGMGRWKYQALK 198

Query: 990  RRQVKIETEAWEQAANESKELLQDMCRHKLAPNLPYMKSLFLGWFEPLQAKIAEEQDFCL 1169
            RRQ+KIETEAWE+AA E KELL+DMC  KLAPNLPYMKSLFLGWFEPL  KIAEE +  L
Sbjct: 199  RRQIKIETEAWEKAAKEYKELLEDMCAQKLAPNLPYMKSLFLGWFEPLHNKIAEEHELYL 258

Query: 1170 RGKSKATHAKYFNLLPADKMAVITMHKLMALLMTGTDDHHGDAKVVHAACSIGDAIEQEV 1349
             GK+KAT+ KYF+ LPAD MAVITMHKLM LLM G +   G  KVVH AC+IGDAIEQEV
Sbjct: 259  AGKTKATYFKYFSQLPADMMAVITMHKLMGLLMAGGE--FGAGKVVHIACAIGDAIEQEV 316

Query: 1350 RIHNFLEQTKKKNNKFQDGTMMEDGKSSGNAQEHEQQKKAVSGLMKKNKLGAVNQILKRQ 1529
            RI+  LE+T++  +K      ME     G  +  E+ KK V+ L+KK  L AV +I+  Q
Sbjct: 317  RIYKILEKTRQ--SKINKDAKMEGEDHEGVTEGKEKLKKKVANLIKKQNLRAVRRIVGGQ 374

Query: 1530 DDAKPWGTEAKAKVGSHLIELLLQTAYIQR-ADEIRDGSPDIRPAFVHTFKTAVS--KFA 1700
            D  KPWG +AKAKVGSHLIEL+LQTAYIQ  AD+  DG PD+RPAF+HTF+T  +  K  
Sbjct: 375  DAFKPWGQDAKAKVGSHLIELVLQTAYIQPPADQFADGPPDVRPAFIHTFRTVTNQAKGG 434

Query: 1701 SRRYGVIHCDPQILKGLEKTARHMVILYMPMLIPPVKWTGYDKGAHIVLPSYIMRTHGAR 1880
            SRRYGVI CDP +LKGLEKTARHMVI YMPML+PP+KW GYDKGAH+ LPSYIMRTHGAR
Sbjct: 435  SRRYGVIQCDPLVLKGLEKTARHMVIPYMPMLVPPIKWKGYDKGAHLYLPSYIMRTHGAR 494

Query: 1881 QQRDVVRRTPRKQLQPVFEALDTIGSTKWRVNKRVLNIIDRIWASGGRLADLVDREDIPL 2060
            QQR+ V+R PRKQL+PVFEALDT+GST+WR+NKRVL+++DRIWASGGRLADLVDR+DIPL
Sbjct: 495  QQREAVKRAPRKQLEPVFEALDTLGSTRWRINKRVLSVVDRIWASGGRLADLVDRDDIPL 554

Query: 2061 PEEPDTDDEALLXXXXXXXXXXXXENRERYSQRCDIELKLAVARKIKDEEGFYYPHNLDF 2240
            PEEPDT+DE +L            ENRER+SQRCDIELKLAVA  +KDEEGF+YPHNLDF
Sbjct: 555  PEEPDTEDETVLKKWKWKVKAVKKENRERHSQRCDIELKLAVAHNMKDEEGFFYPHNLDF 614

Query: 2241 RGRAYPLHPHLNHLGSDVCRGILEFAEGRPLGESGLQWLKIHLANLYANGVDKLSSEGRI 2420
            RGRAYP+HPHLNHLGSD+CRGILEFAEGRPLG+SGL WLKIHLANLYA GV+KLS EGR+
Sbjct: 615  RGRAYPMHPHLNHLGSDICRGILEFAEGRPLGKSGLCWLKIHLANLYAAGVEKLSLEGRL 674

Query: 2421 TFTESHLDEIFDSADKPLEGQRWWLNAEDPFQCLAVCINLTEALRSTSPETTISHIPIHQ 2600
             FTE+HLD+IFDSAD+PLEG+RWWL AEDPFQ LAVCINL+EALRS+SPE TISH+P+HQ
Sbjct: 675  AFTENHLDDIFDSADRPLEGKRWWLKAEDPFQLLAVCINLSEALRSSSPEMTISHVPVHQ 734

Query: 2601 DGSCNGLQHYAALGRDKLGAAAVNLVAREKPADVYSGIASRVLEIMKRDANKDPAIFPDA 2780
            DGSCNGLQHYAALGRDKLGA +VNLVA EKPADVYSGIA+RVL+IMKRDA +DPA FPDA
Sbjct: 735  DGSCNGLQHYAALGRDKLGAVSVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDA 794

Query: 2781 MRARVLINQIDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDVIADDVELFGAACYAAK 2960
            +RARVL++Q+DRKLVKQTVMTSVYGVTYIGARDQIKRRLKER  I DD ELFGAACY AK
Sbjct: 795  LRARVLVDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIDDDSELFGAACYGAK 854

Query: 2961 TTLTALGEMFEAARCIMKWLRECAKIIASENEPVCWTTPLGLPVVQPYRQTGRQLIKTSL 3140
             TLTALGEMF+AAR IM WL ECAK+IASEN PV WTTPLGLPVVQPYR+ GR L+KTSL
Sbjct: 855  VTLTALGEMFQAARSIMSWLGECAKVIASENHPVRWTTPLGLPVVQPYRKIGRHLVKTSL 914

Query: 3141 QVLTLRRETDKVMVKKQITAFPPNFVHSLDSTHMMMTAMACKKAGLNFAGVHDSYWTHAC 3320
            QVLTL+RET+KVMVK+Q TAFPPNFVHSLD +HMMMTA+ACK+AGL FAGVHDSYWTHAC
Sbjct: 915  QVLTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLRFAGVHDSYWTHAC 974

Query: 3321 DVDELNRILREKFVELYEMPVLENLLEGFQKSLPSLYFPPLPDRGDFDLKDVLTSPYFFN 3500
            DVDE+NRILR+KFVELYE P+LENLLE F++S P L FPPLP+RGDFDLKDVL S YFFN
Sbjct: 975  DVDEMNRILRDKFVELYEKPILENLLESFEQSFPMLSFPPLPERGDFDLKDVLESTYFFN 1034


>XP_012835044.1 PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial [Erythranthe guttata]
            EYU39350.1 hypothetical protein MIMGU_mgv1a000681mg
            [Erythranthe guttata]
          Length = 1021

 Score = 1357 bits (3512), Expect = 0.0
 Identities = 695/1035 (67%), Positives = 811/1035 (78%), Gaps = 9/1035 (0%)
 Frame = +3

Query: 423  PQNPT*KILVMWRNIAIQVXXXXXXXXXXXXNKKVTSYSVFSRYCS---FLGLSHDSIFS 593
            P++ +    VMW++IA                K+++S ++ +R  +   FL  + DS+F 
Sbjct: 24   PRSSSNSSTVMWKSIA----------------KRISSKTLLNRCPNSRRFLAFAQDSVFP 67

Query: 594  DSFMSRPRNYCSFVSNDVFPEMGFRKDWIFCSKNRVLRRKNIYCLKHNVNTYGVCHTSNA 773
            D F  R   + +  S+         +  +F S+N++             N  G+   S A
Sbjct: 68   DKFKLRKPLFDNSRSDSNIYTSTHDEFMMFSSRNQM-------------NVTGLSFKSYA 114

Query: 774  SVAEEVEGV-SNSDVEE--MAXXXXXXXXXXXXXXXXXQELLKELRDQEKRSAAKRRRQF 944
            +VAE VE   S++D E+   +                 QELL E+R +EKR   + RR  
Sbjct: 115  TVAEAVEVAGSHTDFEDDNNSNSNNNNINNSNNVDDEFQELLNEVRKEEKRQWRQNRRS- 173

Query: 945  RISSGMGYKKYKALRRRQVKIETEAWEQAANESKELLQDMCRHKLAPNLPYMKSLFLGWF 1124
                GMG +K+KALRRRQVKIETEAWEQAA E +ELL DMC  KLAPNLPYMKSLFLGWF
Sbjct: 174  --GKGMGNEKFKALRRRQVKIETEAWEQAAKEYRELLNDMCEQKLAPNLPYMKSLFLGWF 231

Query: 1125 EPLQAKIAEEQDFCLRGKSKATHAKYFNLLPADKMAVITMHKLMALLMTGTDDHHGDAKV 1304
            EPL+ KI EEQ+F  +GKSKA++A YF+LLPAD MAVITMHKLMALLMTG    HG A+V
Sbjct: 232  EPLRNKIEEEQEFIRKGKSKASYANYFDLLPADMMAVITMHKLMALLMTG---EHGCARV 288

Query: 1305 VHAACSIGDAIEQEVRIHNFLEQTKKKNNKFQDGTMMEDGKSSGNAQEHEQQKKAVSGLM 1484
            V AAC IGDAIEQEVRIH FLE+TKKK  K       E  K   N QE  + ++ V+ LM
Sbjct: 289  VAAACVIGDAIEQEVRIHYFLEKTKKK--KVTKDAETEGDKPDENIQEQAKLREKVTNLM 346

Query: 1485 KKNKLGAVNQILKRQDDAKPWGTEAKAKVGSHLIELLLQTAYIQR-ADEIRDGSPDIRPA 1661
            KK KL AV QI+ RQ +++ WG +AKAKVGS LIEL++QTAYIQ  A +  +G PDI+PA
Sbjct: 347  KKQKLRAVRQIVNRQIESQAWGQDAKAKVGSRLIELIIQTAYIQPPASQSAEGPPDIKPA 406

Query: 1662 FVHTFKTAVS--KFASRRYGVIHCDPQILKGLEKTARHMVILYMPMLIPPVKWTGYDKGA 1835
            F+HTFKT     K  SRRYGVI CDP + KGLE+TARHMVI YMPML+PPVKWTGYDKGA
Sbjct: 407  FLHTFKTVAKEIKSNSRRYGVIQCDPLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGA 466

Query: 1836 HIVLPSYIMRTHGARQQRDVVRRTPRKQLQPVFEALDTIGSTKWRVNKRVLNIIDRIWAS 2015
            ++ LPSY+MRTHGARQQRD V+R PR+QL+PVFEALDT+GSTKWRVNKRVL+IIDRIWAS
Sbjct: 467  YLYLPSYVMRTHGARQQRDTVKRAPREQLKPVFEALDTLGSTKWRVNKRVLSIIDRIWAS 526

Query: 2016 GGRLADLVDREDIPLPEEPDTDDEALLXXXXXXXXXXXXENRERYSQRCDIELKLAVARK 2195
            GGRL DLVDR+DI LPE+PDT+DE+LL            EN ER+SQRCD ELKLAVARK
Sbjct: 527  GGRLGDLVDRDDILLPEQPDTEDESLLQKWKWKVKSIKKENSERHSQRCDTELKLAVARK 586

Query: 2196 IKDEEGFYYPHNLDFRGRAYPLHPHLNHLGSDVCRGILEFAEGRPLGESGLQWLKIHLAN 2375
            +K+EEGF+YPHN+DFRGRAYP+HPHLNHLGSD+CRGILEF+EG+PLG+SGL+WLKIH+AN
Sbjct: 587  MKEEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGILEFSEGKPLGKSGLRWLKIHVAN 646

Query: 2376 LYANGVDKLSSEGRITFTESHLDEIFDSADKPLEGQRWWLNAEDPFQCLAVCINLTEALR 2555
            L+ANGVDKLS EGRI F E+HLD++FDSAD+PLEG+RWWLNAEDPFQCLA CINL EALR
Sbjct: 647  LFANGVDKLSHEGRICFIENHLDDVFDSADRPLEGKRWWLNAEDPFQCLAACINLVEALR 706

Query: 2556 STSPETTISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAREKPADVYSGIASRVLEI 2735
            + SPETTISHIP+HQDGSCNGLQHYAALGRDKLGAAAVNLVA EKPADVYSGIA+RVL+I
Sbjct: 707  NPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDI 766

Query: 2736 MKRDANKDPAIFPDAMRARVLINQIDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDVI 2915
            MK DA KDP++ PDA+ AR+LINQ+DRKLVKQTVMTSVYGVTYIGARDQIKRRLKERD  
Sbjct: 767  MKEDAQKDPSVCPDALHARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDAF 826

Query: 2916 ADDVELFGAACYAAKTTLTALGEMFEAARCIMKWLRECAKIIASENEPVCWTTPLGLPVV 3095
             D+ ++FGAACYAAK TLTALG+MFEAAR IM WL +CAKIIASENEPV WTTPLGLPVV
Sbjct: 827  GDETQIFGAACYAAKITLTALGQMFEAARSIMNWLGDCAKIIASENEPVRWTTPLGLPVV 886

Query: 3096 QPYRQTGRQLIKTSLQVLTLRRETDKVMVKKQITAFPPNFVHSLDSTHMMMTAMACKKAG 3275
            QPYR+ GR LIKTSLQVLTL+RETDKVMVK+Q TAFPPNFVHSLD +HMMMTA+AC+  G
Sbjct: 887  QPYRKVGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACRNGG 946

Query: 3276 LNFAGVHDSYWTHACDVDELNRILREKFVELYEMPVLENLLEGFQKSLPSLYFPPLPDRG 3455
            L FAGVHDSYWTHACDVDE++RILREKFVELYE P+LENLLEGFQ+S P+L FPPLPDRG
Sbjct: 947  LTFAGVHDSYWTHACDVDEMSRILREKFVELYEAPILENLLEGFQQSFPTLTFPPLPDRG 1006

Query: 3456 DFDLKDVLTSPYFFN 3500
            DFDL+DVL SPYFFN
Sbjct: 1007 DFDLRDVLESPYFFN 1021


>XP_010257888.1 PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Nelumbo nucifera]
          Length = 1031

 Score = 1353 bits (3501), Expect = 0.0
 Identities = 688/1030 (66%), Positives = 808/1030 (78%), Gaps = 4/1030 (0%)
 Frame = +3

Query: 423  PQNPT*KILVMWRNIAIQVXXXXXXXXXXXXNKKVTSYSVFSRYCSFLGLSHDSIFSDSF 602
            P N +     MWR+IA +              +     S   R   F+G S DSI +D+ 
Sbjct: 30   PPNSSRISTAMWRHIARRASLTKV--------RLSRDSSSILRTFGFMGFSQDSILNDT- 80

Query: 603  MSRPRNYCSFVSNDVFPEMGFRKDWIFCSKNRVLRRKNIYCLKHNVNTYGVCHTSNASVA 782
             +RP    S +S   F E  F ++    SK   L R  + C ++ ++   + +      A
Sbjct: 81   -TRPFELKSSMSFR-FSERSFLRNGELPSKEDELGRPILGCFRNPISPPRLSNHPKG-YA 137

Query: 783  EEVEGVSNSDVEEMAXXXXXXXXXXXXXXXXXQELLKELRDQEKRSAAKR-RRQFRISSG 959
               E V + D EE                   QELL+E+  +EK+    R ++Q ++  G
Sbjct: 138  SVAEAVCSMDAEE-----------DLSAIDEIQELLEEMGKEEKKELELRDQKQIKLVGG 186

Query: 960  MGYKKYKALRRRQVKIETEAWEQAANESKELLQDMCRHKLAPNLPYMKSLFLGWFEPLQA 1139
            MG  KY  LRRRQVKIETEAWEQAA E +ELL DMC  KLAPNLPYMKSLFLGWFEPL+ 
Sbjct: 187  MGQGKYLLLRRRQVKIETEAWEQAAKEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRD 246

Query: 1140 KIAEEQDFCLRGKSKATHAKYFNLLPADKMAVITMHKLMALLMTGTDDHHGDAKVVHAAC 1319
             I  EQ+ C +GK++  +A YF+ LPA+ M+VITMHKLM LLMTG +  HG  +VV AAC
Sbjct: 247  CIVAEQELCRKGKNRTAYAPYFDQLPAEMMSVITMHKLMGLLMTGGE--HGSCRVVQAAC 304

Query: 1320 SIGDAIEQEVRIHNFLEQTKKKNNKFQDGTMMEDGKSSGNAQEHEQQKKAVSGLMKKNKL 1499
             IG+AIE EVRIH FLE+T+KK +K +     + G+S    +E ++ +K V+ LMKK KL
Sbjct: 305  QIGEAIENEVRIHKFLEKTRKKTDKDKKA---DGGESDPVIKEQQRLRKKVTDLMKKQKL 361

Query: 1500 GAVNQILKRQDDAKPWGTEAKAKVGSHLIELLLQTAYIQR-ADEIRDGSPDIRPAFVHTF 1676
              V QI+K QDD+KPWG +A+AKVGS LIELL+QTAYIQ   D++ DG PDIRPAF H+ 
Sbjct: 362  QQVRQIVKGQDDSKPWGQDAQAKVGSRLIELLMQTAYIQPPVDQLADGPPDIRPAFRHSL 421

Query: 1677 KTAVSKF--ASRRYGVIHCDPQILKGLEKTARHMVILYMPMLIPPVKWTGYDKGAHIVLP 1850
            KT   +    SRRYGVI CDP + KGLE+TARHMVI YMPML+PPV WTGYDKGA++ LP
Sbjct: 422  KTVTKEAQKTSRRYGVIECDPLVRKGLERTARHMVIPYMPMLVPPVNWTGYDKGAYLFLP 481

Query: 1851 SYIMRTHGARQQRDVVRRTPRKQLQPVFEALDTIGSTKWRVNKRVLNIIDRIWASGGRLA 2030
            SY+MRTHGARQQR+ V+R PRKQL+PVFEALDT+G+TKWRVNKRVL+++DRIWASGGRLA
Sbjct: 482  SYVMRTHGARQQREAVKRAPRKQLEPVFEALDTLGNTKWRVNKRVLSVVDRIWASGGRLA 541

Query: 2031 DLVDREDIPLPEEPDTDDEALLXXXXXXXXXXXXENRERYSQRCDIELKLAVARKIKDEE 2210
            DLVDRED+P+PEEPDT+DEA +            EN ER+SQRCDIELKLAVAR++KDE+
Sbjct: 542  DLVDREDVPIPEEPDTEDEAEIKKWKWKVKAAKKENSERHSQRCDIELKLAVARRMKDED 601

Query: 2211 GFYYPHNLDFRGRAYPLHPHLNHLGSDVCRGILEFAEGRPLGESGLQWLKIHLANLYANG 2390
            GF+YPHNLDFRGRAYP+HP+LNHLGSD+CRGILEFAEGRPLG+SGLQWLKIHLANLYA G
Sbjct: 602  GFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLQWLKIHLANLYAGG 661

Query: 2391 VDKLSSEGRITFTESHLDEIFDSADKPLEGQRWWLNAEDPFQCLAVCINLTEALRSTSPE 2570
            VDKLS EGRI FTE+HLD+IFDSAD+PLEG+RWWLNAEDPFQCLA CINL+EALRS+SPE
Sbjct: 662  VDKLSYEGRIAFTENHLDDIFDSADRPLEGRRWWLNAEDPFQCLAACINLSEALRSSSPE 721

Query: 2571 TTISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAREKPADVYSGIASRVLEIMKRDA 2750
            TTISH+P+HQDGSCNGLQHYAALGRDKLGAAAVNLVA EKPADVYSGIA+RVL+IM+RDA
Sbjct: 722  TTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRRDA 781

Query: 2751 NKDPAIFPDAMRARVLINQIDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDVIADDVE 2930
             KDP   P+AM AR+LINQ+DRKLVKQTVMTSVYGVTYIGARDQIKRRLKER+VIADD E
Sbjct: 782  EKDPETHPNAMHARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNVIADDSE 841

Query: 2931 LFGAACYAAKTTLTALGEMFEAARCIMKWLRECAKIIASENEPVCWTTPLGLPVVQPYRQ 3110
            LFGA+CYAAKTTLTALGEMFEAAR IM WL +CAKIIASEN+PV WTTPLGLPVVQPYR+
Sbjct: 842  LFGASCYAAKTTLTALGEMFEAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRK 901

Query: 3111 TGRQLIKTSLQVLTLRRETDKVMVKKQITAFPPNFVHSLDSTHMMMTAMACKKAGLNFAG 3290
             GR LIKTSLQVLTL+RETDKVMVK+Q TAFPPNFVHSLD +HMMMTA+AC+KAGLNFAG
Sbjct: 902  LGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLNFAG 961

Query: 3291 VHDSYWTHACDVDELNRILREKFVELYEMPVLENLLEGFQKSLPSLYFPPLPDRGDFDLK 3470
            VHDSYWTHACD+DE+N+ILREKFVELYE P+LENLLE FQ+S P+L FPPLP+RGDFDL+
Sbjct: 962  VHDSYWTHACDIDEMNKILREKFVELYEKPILENLLESFQQSFPTLNFPPLPERGDFDLR 1021

Query: 3471 DVLTSPYFFN 3500
            +VL SPYFFN
Sbjct: 1022 EVLDSPYFFN 1031


>XP_015880486.1 PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial [Ziziphus jujuba]
            XP_015880487.1 PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial [Ziziphus jujuba]
          Length = 1028

 Score = 1350 bits (3493), Expect = 0.0
 Identities = 697/1022 (68%), Positives = 801/1022 (78%), Gaps = 5/1022 (0%)
 Frame = +3

Query: 450  VMWRNIAIQVXXXXXXXXXXXXNKKVTSYSVFSRYCSFLGLSHDSIFSDSFMSRPRNYCS 629
            +MWRN A Q               +  S+S FSR CSFLG +  S   +    RP    S
Sbjct: 39   LMWRNFARQAFSRNLRF-------RPDSHS-FSRACSFLGKTEHS---EKLKFRPFELSS 87

Query: 630  FVSNDVFPEMGFRKDWIFCSKNRVLRRKNIYCLKHNV-NTYGVCHTSNASVAEEVEGVSN 806
              S+  F E GF ++    S +  + R     +++ V    G+C    ASVAE    VS+
Sbjct: 88   -CSSYGFSETGFCRNGEISSHDDPVSRLGYGFVRNQVAGNIGICPKGYASVAE---AVSS 143

Query: 807  SDVEEMAXXXXXXXXXXXXXXXXXQELLKELRDQEKRSAAKRRRQF-RISSGMGYKKYKA 983
            ++VE+                   QELL+++  +EK+     RR   ++  GMG KKY+ 
Sbjct: 144  TEVED-----------DISAGEEIQELLQQMNKEEKKEILNMRRNHQKMVRGMGEKKYQV 192

Query: 984  LRRRQVKIETEAWEQAANESKELLQDMCRHKLAPNLPYMKSLFLGWFEPLQAKIAEEQDF 1163
            LRRRQVKIETEAWEQA  E KELL DMC  KLAPNLPYMKSLFLGWFEPL+  IA+EQ+ 
Sbjct: 193  LRRRQVKIETEAWEQALKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRNAIAKEQEL 252

Query: 1164 CLRGKSKATHAKYFNLLPADKMAVITMHKLMALLMTGTDDHHGDAKVVHAACSIGDAIEQ 1343
            C +GK+K  +A YF+ LPA+ MAVITMHKLM LLMTG +  HG A+VV AAC IGDAIEQ
Sbjct: 253  CRQGKNKPAYAPYFDQLPAEMMAVITMHKLMGLLMTGGE--HGTARVVPAACIIGDAIEQ 310

Query: 1344 EVRIHNFLEQTKKKNNKFQDGTMMEDGKSSGNAQEHEQQKKAVSGLMKKNKLGAVNQILK 1523
            EVRI  FLE+T+KK      G   ED        + ++ KK V+ LMKK KL AV QI+K
Sbjct: 311  EVRIQRFLEKTRKKKL----GKDKEDEGYEDTMIKEQKLKKKVTDLMKKQKLRAVRQIVK 366

Query: 1524 RQDDAKPWGTEAKAKVGSHLIELLLQTAYIQR-ADEIRDGSPDIRPAFVHTFKTAV--SK 1694
            RQDD K WG +A+AKVGS LIELL +TA+IQ  AD+  DG PD+RPAF+HTF+T V  +K
Sbjct: 367  RQDDLKSWGQDARAKVGSRLIELLTETAHIQPPADQSADGPPDVRPAFLHTFRTVVKNAK 426

Query: 1695 FASRRYGVIHCDPQILKGLEKTARHMVILYMPMLIPPVKWTGYDKGAHIVLPSYIMRTHG 1874
               RRYGVI CDP +LKGL++TARHMVI YMPML+PPV WTGYDKG H+ LPSY+MRTHG
Sbjct: 427  NTGRRYGVIECDPLVLKGLDRTARHMVIPYMPMLVPPVNWTGYDKGGHLYLPSYVMRTHG 486

Query: 1875 ARQQRDVVRRTPRKQLQPVFEALDTIGSTKWRVNKRVLNIIDRIWASGGRLADLVDREDI 2054
            ARQQR+ V+R PR+QL+PVFEALD +G+TKWR+NKR+L+I+DRIW S GRLADLVDR+D+
Sbjct: 487  ARQQREAVKRAPREQLEPVFEALDALGNTKWRINKRILSIVDRIWVSSGRLADLVDRDDV 546

Query: 2055 PLPEEPDTDDEALLXXXXXXXXXXXXENRERYSQRCDIELKLAVARKIKDEEGFYYPHNL 2234
            PLPE PDT+DE LL            ENRER+SQRCD ELKLAVARK+KDEEGFYYPHNL
Sbjct: 547  PLPEMPDTEDETLLKKWKWKVKNVKKENRERHSQRCDTELKLAVARKMKDEEGFYYPHNL 606

Query: 2235 DFRGRAYPLHPHLNHLGSDVCRGILEFAEGRPLGESGLQWLKIHLANLYANGVDKLSSEG 2414
            DFRGRAYP+HP+LNHLGSD+CRGILEFAEGRPLG+SGL+WLKIHLANLYA GVDKLS EG
Sbjct: 607  DFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSLEG 666

Query: 2415 RITFTESHLDEIFDSADKPLEGQRWWLNAEDPFQCLAVCINLTEALRSTSPETTISHIPI 2594
            RI FTE+HLDEIFDSAD PLEG+RWWLNAEDPFQCLAVCINLTEALRS+SPET ISHIP+
Sbjct: 667  RIAFTENHLDEIFDSADSPLEGKRWWLNAEDPFQCLAVCINLTEALRSSSPETFISHIPV 726

Query: 2595 HQDGSCNGLQHYAALGRDKLGAAAVNLVAREKPADVYSGIASRVLEIMKRDANKDPAIFP 2774
            HQDGSCNGLQHYAALGRDK GAAAVNLVA EKPADVYSGIA+ VL+IMKRDA +DPAIFP
Sbjct: 727  HQDGSCNGLQHYAALGRDKSGAAAVNLVAGEKPADVYSGIAASVLKIMKRDAERDPAIFP 786

Query: 2775 DAMRARVLINQIDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDVIADDVELFGAACYA 2954
            DA+RA+VLINQ+DRKLVKQTVMTSVYGVTYIGARDQIKRRLKER  I DD ELFG ACYA
Sbjct: 787  DALRAKVLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGGITDDSELFGCACYA 846

Query: 2955 AKTTLTALGEMFEAARCIMKWLRECAKIIASENEPVCWTTPLGLPVVQPYRQTGRQLIKT 3134
            AKTTLTALG+MFEAAR IM WL +CAKIIASEN+PV WTTPLGLPVVQPYR+ GR LIKT
Sbjct: 847  AKTTLTALGQMFEAARNIMNWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKT 906

Query: 3135 SLQVLTLRRETDKVMVKKQITAFPPNFVHSLDSTHMMMTAMACKKAGLNFAGVHDSYWTH 3314
            SLQVLTL+RET+KVMVK+Q TAFPPNFVHSLD +HMMMTA+ACKKAGLNFAGVHDSYWTH
Sbjct: 907  SLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTH 966

Query: 3315 ACDVDELNRILREKFVELYEMPVLENLLEGFQKSLPSLYFPPLPDRGDFDLKDVLTSPYF 3494
            ACDVD +N ILREKFVELYE P+LENLLE FQ+S P+L FP LP+RG+FDLK+VL SPYF
Sbjct: 967  ACDVDLMNTILREKFVELYETPILENLLESFQQSFPTLTFPSLPERGNFDLKEVLESPYF 1026

Query: 3495 FN 3500
            FN
Sbjct: 1027 FN 1028


>XP_007214918.1 hypothetical protein PRUPE_ppa000719mg [Prunus persica] ONI18904.1
            hypothetical protein PRUPE_3G247300 [Prunus persica]
          Length = 1024

 Score = 1349 bits (3492), Expect = 0.0
 Identities = 689/1030 (66%), Positives = 804/1030 (78%), Gaps = 5/1030 (0%)
 Frame = +3

Query: 426  QNPT*KILVMWRNIAIQVXXXXXXXXXXXXNKKVTSYSVFSRYCSFLGLSHDSIFSDSFM 605
            +NP+     +WRN A Q                + S S FSR  S LG+  +S+F  +F 
Sbjct: 27   KNPSMISTTVWRNFAKQAISRKQRFH-------INSQS-FSRAYSLLGICQESVFPGNFK 78

Query: 606  SRPRNYCSFVSNDVFPEMGFRKDWIFCSKNRVLRRKNIYCLKHNVNTYGVCHTSNASVAE 785
                + CS +    F E+GFR      S    + + + + +++ +   G C    ASVAE
Sbjct: 79   PFELSSCSSLR---FSEVGFRGKGAISSPEDCMCKPSFWSVRNPIWFNGFCPKGYASVAE 135

Query: 786  EVEGVSNSDVEEMAXXXXXXXXXXXXXXXXXQELLKELRDQEKRSAA-KRRRQFRISSGM 962
                VS++DVEE                   QELL+++  +EKR A  K+R +   + GM
Sbjct: 136  ---AVSSTDVEEEVSVVDEV-----------QELLQQMSIEEKREAQYKQRTRQNRARGM 181

Query: 963  GYKKYKALRRRQVKIETEAWEQAANESKELLQDMCRHKLAPNLPYMKSLFLGWFEPLQAK 1142
            G  KY  L+RRQ+KIETEAWE+AA E +EL+ DMC  KLAPNLPYMKSLFLGWFEPL+  
Sbjct: 182  GQGKYHMLKRRQIKIETEAWERAAKEYRELMMDMCEQKLAPNLPYMKSLFLGWFEPLRNA 241

Query: 1143 IAEEQDFCLRGKSKATHAKYFNLLPADKMAVITMHKLMALLMTGTDDHHGDAKVVHAACS 1322
            I +EQD C +GK+K  +A Y + LPAD M+VITMHKLM LLMTG +  HG  +VV AAC+
Sbjct: 242  IDKEQDLCRKGKNKTAYAPYIDQLPADMMSVITMHKLMGLLMTGGE--HGTCRVVAAACT 299

Query: 1323 IGDAIEQEVRIHNFLEQTKKKN-NKFQDGTMMEDGKSSGNAQEHEQQKKAVSGLMKKNKL 1499
            IG+AIEQEVRIH FLE T+KK  +K Q     E+G+S    +E E+  K V+ LMKK KL
Sbjct: 300  IGEAIEQEVRIHKFLEMTRKKKVDKDQ-----ENGESDAAKKEREKLNKKVTNLMKKQKL 354

Query: 1500 GAVNQILKRQDDAKPWGTEAKAKVGSHLIELLLQTAYIQR-ADEIRDGSPDIRPAFVHTF 1676
             AV  I+ + D +K W  EA+AKVGS LIELL QTA+IQ  AD++ DG PDIRPAFVHTF
Sbjct: 355  KAVRGIVSKHDASKSWSLEARAKVGSRLIELLTQTAFIQPPADQLADGPPDIRPAFVHTF 414

Query: 1677 KTAV--SKFASRRYGVIHCDPQILKGLEKTARHMVILYMPMLIPPVKWTGYDKGAHIVLP 1850
            +T    +K ASRRYGVI CDP +LKGLEKTARHMVI YMPML+PP+ WTGYDKG +  LP
Sbjct: 415  RTVAKDAKNASRRYGVIECDPLVLKGLEKTARHMVIPYMPMLVPPLNWTGYDKGGYFFLP 474

Query: 1851 SYIMRTHGARQQRDVVRRTPRKQLQPVFEALDTIGSTKWRVNKRVLNIIDRIWASGGRLA 2030
            SY+MR HGARQQR+ ++RTPR+QL+PVF+ALD +G+T+WRVNKRVL+++DRIWASGG LA
Sbjct: 475  SYVMRIHGARQQREAIKRTPREQLEPVFKALDALGNTRWRVNKRVLSVVDRIWASGGHLA 534

Query: 2031 DLVDREDIPLPEEPDTDDEALLXXXXXXXXXXXXENRERYSQRCDIELKLAVARKIKDEE 2210
            DLVDR D+PLPEEPDT+DE LL            EN ER+SQRCD ELKLAVARK+KDEE
Sbjct: 535  DLVDRNDVPLPEEPDTEDETLLKKWKWKVKSVKKENMERHSQRCDTELKLAVARKMKDEE 594

Query: 2211 GFYYPHNLDFRGRAYPLHPHLNHLGSDVCRGILEFAEGRPLGESGLQWLKIHLANLYANG 2390
            GFYYPHNLDFRGRAYP+HP+LNHLGSDVCRGILEF EGRPLG+SGL WLKIHLANLYA G
Sbjct: 595  GFYYPHNLDFRGRAYPMHPYLNHLGSDVCRGILEFQEGRPLGKSGLSWLKIHLANLYAGG 654

Query: 2391 VDKLSSEGRITFTESHLDEIFDSADKPLEGQRWWLNAEDPFQCLAVCINLTEALRSTSPE 2570
            VDKLS EGRI FTE+HLD+IFDS DKPLEG+RWWL AEDPFQCLAVCINL EALRS+SPE
Sbjct: 655  VDKLSLEGRIAFTENHLDDIFDSVDKPLEGRRWWLKAEDPFQCLAVCINLAEALRSSSPE 714

Query: 2571 TTISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAREKPADVYSGIASRVLEIMKRDA 2750
            T ISHIP+HQDGSCNGLQHYAALGRDKLGAA+VNLV  EKPADVYSGIA RVLEIM+RDA
Sbjct: 715  TFISHIPVHQDGSCNGLQHYAALGRDKLGAASVNLVTGEKPADVYSGIAVRVLEIMRRDA 774

Query: 2751 NKDPAIFPDAMRARVLINQIDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDVIADDVE 2930
             KDP +FP+A+RA++LINQ+DRKLVKQTVMTSVYGVTYIGARDQIKRRLKER  I+DD E
Sbjct: 775  QKDPVVFPEALRAKLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGSISDDAE 834

Query: 2931 LFGAACYAAKTTLTALGEMFEAARCIMKWLRECAKIIASENEPVCWTTPLGLPVVQPYRQ 3110
            +FG ACYAAK TLTALGEMFEAAR IM WL ECAKIIASEN+PV WTTPLGLPVVQPYR+
Sbjct: 835  IFGCACYAAKITLTALGEMFEAARGIMSWLGECAKIIASENQPVRWTTPLGLPVVQPYRK 894

Query: 3111 TGRQLIKTSLQVLTLRRETDKVMVKKQITAFPPNFVHSLDSTHMMMTAMACKKAGLNFAG 3290
             GR LIKTSLQVLTL+RET+KVMVK+Q TAFPPNFVHSLDS+HMMMTA+ACKKAGL+FAG
Sbjct: 895  FGRHLIKTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDSSHMMMTAIACKKAGLSFAG 954

Query: 3291 VHDSYWTHACDVDELNRILREKFVELYEMPVLENLLEGFQKSLPSLYFPPLPDRGDFDLK 3470
            VHDSYWTHACDVDE+N+ILREKFV+LYE P+LENLLE FQ+S P+L FPPLP+RGDFDL+
Sbjct: 955  VHDSYWTHACDVDEMNKILREKFVQLYETPILENLLESFQQSFPALTFPPLPERGDFDLR 1014

Query: 3471 DVLTSPYFFN 3500
            DVL SPYFFN
Sbjct: 1015 DVLESPYFFN 1024