BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00013632
         (2071 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_019230135.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   698   0.0  
XP_009601650.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   691   0.0  
XP_009785134.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   690   0.0  
XP_006350582.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   681   0.0  
XP_015070568.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   680   0.0  
XP_016564454.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   675   0.0  
XP_004234179.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   671   0.0  
CDP05091.1 unnamed protein product [Coffea canephora]                 666   0.0  
XP_011084487.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   654   0.0  
XP_015070569.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   650   0.0  
XP_002268709.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   645   0.0  
XP_004234180.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   642   0.0  
XP_012858574.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   642   0.0  
XP_007219010.1 hypothetical protein PRUPE_ppa004259mg [Prunus pe...   629   0.0  
XP_010266467.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   627   0.0  
XP_019415367.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   622   0.0  
XP_018505629.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   622   0.0  
XP_004308009.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   620   0.0  
XP_018503184.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   620   0.0  
XP_009368680.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   619   0.0  

>XP_019230135.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Nicotiana attenuata]
            OIT06417.1 rna polymerase sigma factor sige,
            chloroplasticmitochondrial [Nicotiana attenuata]
          Length = 518

 Score =  698 bits (1802), Expect = 0.0
 Identities = 364/518 (70%), Positives = 421/518 (81%), Gaps = 5/518 (0%)
 Frame = +1

Query: 244  MGVVTVSSSATRTRLGLNSIFSTDTTPLKRMSVVSFKTDKPKNASLIVTQESLSLPRDNS 423
            MGVVTVSSSA+R+ LGL++ FS    PLKR  VVSFK DK K  +L+  +ES+SLP + S
Sbjct: 1    MGVVTVSSSASRSPLGLSTRFSAHLCPLKRPVVVSFKKDKTKKTTLVAPKESISLPIETS 60

Query: 424  KGNKKKLRQAKKKPERVQATTID-EVAPTTIELDYSEAAAKLESIYKRCHESSSCDTLVK 600
            K N+K+ R+  K+ ERV A +ID E +P+T+ELDYSEAAAKLESIYKR  E+ S DT  K
Sbjct: 61   KENEKRSRRVSKRTERVHAVSIDIEASPSTLELDYSEAAAKLESIYKRSLETDSSDTEAK 120

Query: 601  DCE-AKRGRDSRKRPV---EAVKDITDSVVRSRKNKAKRLSLDKRISLRTXXXXXXXXXX 768
            D +  KR + +RKR V   EA K I D+VV++R+ K+KRL+LD+RI+L            
Sbjct: 121  DHQIVKRRQRTRKRIVGDEEAKKGIADNVVKNRRKKSKRLNLDQRIALLKNKEGELVASS 180

Query: 769  QKIRSREDEEVEKIHRLLREYANSSDIVSLDWKKMKIPPVLPSSEHVWLFKLMQPMKEIL 948
            Q  + +ED E EKI +L+REY+ ++D+ SLDWKKMKIPPVLPSSEH WLFKLMQPMK IL
Sbjct: 181  QNRKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAIL 240

Query: 949  EVKKNLKNDLGREPTDGESAQAFNVHLFELKKNMEVGQAARNKLIKHNLRLVLFVMNKYF 1128
            +VK+NL+NDLGREPTD E A+A N+   EL+KN+EVG+AARNKLIKHNLRLVLFV+NKYF
Sbjct: 241  QVKENLQNDLGREPTDAEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVINKYF 300

Query: 1129 QDFVQGPKFQDLCQAGVKGLITAIDRFEPNRRLRLSTYGLFWIRHAIIRSMTVSSFTKVP 1308
            QDF  GPKFQDLCQAGVKGLITA+DRFEPNR+ RLSTYGLFWIRHAIIRSMT SSFTKVP
Sbjct: 301  QDFANGPKFQDLCQAGVKGLITAVDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVP 360

Query: 1309 FGLESVRVEIQKAKLELLFELQRLPTEIEIIERVRISPERYNEVMNASKSAVSLNARHSI 1488
            FGLES+RVEIQKAKL+LLFELQR+PT+ EIIERVR+SPERY+EVM  SK   SL+ARH  
Sbjct: 361  FGLESIRVEIQKAKLQLLFELQRMPTDEEIIERVRLSPERYHEVMKVSKPVFSLHARHMT 420

Query: 1489 TQEEFINGITDVDGVEGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLG 1668
            TQEEFINGITDVDGV+GDKRRQPA             KPKESLVIRQRYGLDGKGDRTLG
Sbjct: 421  TQEEFINGITDVDGVDGDKRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLG 480

Query: 1669 EIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRQYVF 1782
            EIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRQY+F
Sbjct: 481  EIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRQYIF 518


>XP_009601650.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Nicotiana tomentosiformis]
            XP_016512797.1 PREDICTED: RNA polymerase sigma factor
            sigE, chloroplastic/mitochondrial-like [Nicotiana
            tabacum]
          Length = 519

 Score =  691 bits (1784), Expect = 0.0
 Identities = 361/519 (69%), Positives = 420/519 (80%), Gaps = 6/519 (1%)
 Frame = +1

Query: 244  MGVVTVSSSATRTRLGLNSIFSTDTTPLKRMSVVSFKTDKPKNASLIVTQESLSLPRDNS 423
            MGVVTVSSSA+R+ LGL++ FS    PLKR  VVSFK DK K  +L+  +ES+SLP + S
Sbjct: 1    MGVVTVSSSASRSPLGLSTSFSAHLCPLKRPVVVSFKKDKTKKTTLVAPKESISLPIETS 60

Query: 424  KGNKKKLRQAKKKPERVQATTID-EVAPTTIELDYSEAAAKLESIYKRCHESSSCDTLVK 600
            K N+K+ R+  K+ ERV A +ID E +P+T+ELDYSEAAAKLESIYKR  E+ S DT  K
Sbjct: 61   KENEKRSRRVSKRTERVHAVSIDIEASPSTLELDYSEAAAKLESIYKRSLETDSSDTEAK 120

Query: 601  DCE-AKRGRDSRKRPVE----AVKDITDSVVRSRKNKAKRLSLDKRISLRTXXXXXXXXX 765
            D +  KR + +RKR +E    A K I D+VV++R+ K+KRL+LD+RI+L           
Sbjct: 121  DHQIVKRRQRTRKRIIEGNEEAKKGIADNVVKNRRKKSKRLNLDQRIALLKNKEGELVAS 180

Query: 766  XQKIRSREDEEVEKIHRLLREYANSSDIVSLDWKKMKIPPVLPSSEHVWLFKLMQPMKEI 945
             QK   +ED E EKI +L+REY+ ++D+ SLDWKKMKIPPVLPSSEH WLFKLMQPMK I
Sbjct: 181  SQKRELKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAI 240

Query: 946  LEVKKNLKNDLGREPTDGESAQAFNVHLFELKKNMEVGQAARNKLIKHNLRLVLFVMNKY 1125
            L+VK+NL+NDLGREPTD E A+A N+   EL+KN+EVG+AARNKLIKHNLRLVLFV+NKY
Sbjct: 241  LQVKENLQNDLGREPTDAEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVINKY 300

Query: 1126 FQDFVQGPKFQDLCQAGVKGLITAIDRFEPNRRLRLSTYGLFWIRHAIIRSMTVSSFTKV 1305
            FQDF  GPKFQDLCQAGVKGLITAIDRFEPNR+ RLSTYGLFWIRHAIIRSMT SSFTKV
Sbjct: 301  FQDFANGPKFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKV 360

Query: 1306 PFGLESVRVEIQKAKLELLFELQRLPTEIEIIERVRISPERYNEVMNASKSAVSLNARHS 1485
            PFGLES+RVEIQKAKL+LLFELQR+PT+ EIIERVR+SPERY+EVM  SK   SL+ARH 
Sbjct: 361  PFGLESIRVEIQKAKLQLLFELQRMPTDEEIIERVRLSPERYHEVMKVSKPVFSLHARHM 420

Query: 1486 ITQEEFINGITDVDGVEGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTL 1665
             TQEEFINGITDVDGV+G KR+QPA             KPKESLVIRQRYGLDGKG+RTL
Sbjct: 421  TTQEEFINGITDVDGVDGVKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTL 480

Query: 1666 GEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRQYVF 1782
            GEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLR+Y+F
Sbjct: 481  GEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYIF 519


>XP_009785134.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Nicotiana sylvestris]
            XP_016473301.1 PREDICTED: RNA polymerase sigma factor
            sigE, chloroplastic/mitochondrial-like [Nicotiana
            tabacum]
          Length = 519

 Score =  690 bits (1780), Expect = 0.0
 Identities = 361/519 (69%), Positives = 418/519 (80%), Gaps = 6/519 (1%)
 Frame = +1

Query: 244  MGVVTVSSSATRTRLGLNSIFSTDTTPLKRMSVVSFKTDKPKNASLIVTQESLSLPRDNS 423
            MGVVTVSSSA+R+ LGL++ FS    PLKR  VVSFK DK K  +L+  +ES+SLP + S
Sbjct: 1    MGVVTVSSSASRSPLGLSTRFSAHLCPLKRPVVVSFKKDKTKKTTLVAPKESISLPIETS 60

Query: 424  KGNKKKLRQAKKKPERVQATTID-EVAPTTIELDYSEAAAKLESIYKRCHESSSCDTLVK 600
            K N+K+ R+  K+ ERV A +ID E + + +ELDYSEAAAKLESIYKR  E+ S DT  K
Sbjct: 61   KENEKRSRRVSKRTERVHAVSIDIEASTSPLELDYSEAAAKLESIYKRSLETDSSDTEAK 120

Query: 601  DCE-AKRGRDSRKRPVEA----VKDITDSVVRSRKNKAKRLSLDKRISLRTXXXXXXXXX 765
            D +  KR + +RKR VE      K I D+VV++R+ K+KRL+LD+RI+L           
Sbjct: 121  DHQIVKRRQRTRKRIVEGDEETKKGIADNVVKNRRKKSKRLNLDQRIALLKNKEGELVAS 180

Query: 766  XQKIRSREDEEVEKIHRLLREYANSSDIVSLDWKKMKIPPVLPSSEHVWLFKLMQPMKEI 945
             QK   +ED E EKI +L+REY+ ++D+ SLDWKKMKIPPVLPSSEH WLFKLMQPMK I
Sbjct: 181  SQKRELKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAI 240

Query: 946  LEVKKNLKNDLGREPTDGESAQAFNVHLFELKKNMEVGQAARNKLIKHNLRLVLFVMNKY 1125
            L+VK+NL+NDLGREPTD E+A+A N+   EL+KN+EVG+AARNKLIKHNLRLVLFV+NKY
Sbjct: 241  LQVKENLQNDLGREPTDAEAAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVINKY 300

Query: 1126 FQDFVQGPKFQDLCQAGVKGLITAIDRFEPNRRLRLSTYGLFWIRHAIIRSMTVSSFTKV 1305
            FQDF  GPKFQDLCQAGVKGLITAIDRFEPNR+ RLSTYGLFWIRHAIIRSMT SSFTKV
Sbjct: 301  FQDFANGPKFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKV 360

Query: 1306 PFGLESVRVEIQKAKLELLFELQRLPTEIEIIERVRISPERYNEVMNASKSAVSLNARHS 1485
            PFGLES+RVEIQKAKL+LLFELQR+PT+ EIIERVR+SPERY+EVM  SK   SL+ARH 
Sbjct: 361  PFGLESIRVEIQKAKLQLLFELQRMPTDEEIIERVRLSPERYHEVMKVSKPVFSLHARHM 420

Query: 1486 ITQEEFINGITDVDGVEGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTL 1665
             TQEE INGITDVDGV+GDKRRQPA             KPKESLVIRQRYGLDGKGDRTL
Sbjct: 421  TTQEELINGITDVDGVDGDKRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 480

Query: 1666 GEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRQYVF 1782
            GEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLR+Y+F
Sbjct: 481  GEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYIF 519


>XP_006350582.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Solanum tuberosum]
          Length = 516

 Score =  681 bits (1758), Expect = 0.0
 Identities = 356/517 (68%), Positives = 418/517 (80%), Gaps = 4/517 (0%)
 Frame = +1

Query: 244  MGVVTVSSSATRTRLGLNSIFSTDTTPLKRMSVVSFKTDKPKNASLIVTQESLSLPRDNS 423
            MGVVTVSSSA+R+ LGL+S FST   PLKR  +VSFK DK KN +LI  +ES+SL  + S
Sbjct: 1    MGVVTVSSSASRSPLGLSSRFSTRLCPLKRPVIVSFKKDKTKNTTLIAPKESISLSIETS 60

Query: 424  KGNKKKLRQAKKKPERVQATTIDEVAPTTIELDYSEAAAKLESIYKRCHESSSCDTLVKD 603
            K N+K+ R+  K+ ERV A  I E +P+T+ELDYSEAAAKLESIYKR  E++S +T V+D
Sbjct: 61   KENEKRSRRVSKRSERVHAVAI-EASPSTLELDYSEAAAKLESIYKRSLETASSNTEVQD 119

Query: 604  CEAKRGRDSRKRPVE----AVKDITDSVVRSRKNKAKRLSLDKRISLRTXXXXXXXXXXQ 771
               KR   +RKR VE    A K++ D+VV++R+  +KRL+LD+RI+L            +
Sbjct: 120  HLVKRRPRTRKRIVEGDEEAKKEVADNVVKNRRKTSKRLNLDQRIALLKNKEGEMVASSE 179

Query: 772  KIRSREDEEVEKIHRLLREYANSSDIVSLDWKKMKIPPVLPSSEHVWLFKLMQPMKEILE 951
            + + +ED E EKI +L+REY+ ++D+ SLDWKKMKIPPVLPSSEHVWLFKLMQPMK IL+
Sbjct: 180  RRKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHVWLFKLMQPMKAILQ 239

Query: 952  VKKNLKNDLGREPTDGESAQAFNVHLFELKKNMEVGQAARNKLIKHNLRLVLFVMNKYFQ 1131
            VK+NL+NDLGREPTDGE A+A N+   EL+K +EVG+AARNKLIKHNLRLVLFVMNKYFQ
Sbjct: 240  VKENLQNDLGREPTDGEVAEATNMDASELRKKLEVGRAARNKLIKHNLRLVLFVMNKYFQ 299

Query: 1132 DFVQGPKFQDLCQAGVKGLITAIDRFEPNRRLRLSTYGLFWIRHAIIRSMTVSSFTKVPF 1311
            DF  G +FQDLCQAGVKGLITAIDRFEPNR+ RLSTYGLFWIRHAIIRSMT SSFTKVPF
Sbjct: 300  DFANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPF 359

Query: 1312 GLESVRVEIQKAKLELLFELQRLPTEIEIIERVRISPERYNEVMNASKSAVSLNARHSIT 1491
            GLES+RVEIQKAKLELLFELQR+PT+ EII RV +SPERY+EVM  SK   SL+AR+  T
Sbjct: 360  GLESIRVEIQKAKLELLFELQRIPTDEEIIRRVGLSPERYHEVMKVSKPVSSLHARNKTT 419

Query: 1492 QEEFINGITDVDGVEGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGE 1671
            QEE INGITDVDGV+GDKR+QPA             KPKESLVIRQRYGLDGKGDRTLGE
Sbjct: 420  QEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 479

Query: 1672 IAGNLNISREMVRKHEVKALMKLKHPTRVDYLRQYVF 1782
            IAGNLNISREMVRKHEVKALMKLKHPTRVDY+R+Y+F
Sbjct: 480  IAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYIF 516


>XP_015070568.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial isoform X1 [Solanum
            pennellii]
          Length = 516

 Score =  680 bits (1755), Expect = 0.0
 Identities = 355/517 (68%), Positives = 416/517 (80%), Gaps = 4/517 (0%)
 Frame = +1

Query: 244  MGVVTVSSSATRTRLGLNSIFSTDTTPLKRMSVVSFKTDKPKNASLIVTQESLSLPRDNS 423
            MGVVTVSSSA+R+ LGL+S FS    PLKR  +VSFK DK KN +L+  +ES+SLP + S
Sbjct: 1    MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDKTKNTTLVSPKESISLPIETS 60

Query: 424  KGNKKKLRQAKKKPERVQATTIDEVAPTTIELDYSEAAAKLESIYKRCHESSSCDTLVKD 603
            K N+K+ R+  K+ ERV A TI E  P+T+ELDYSEAAAKLESIYKR  E++S +T VKD
Sbjct: 61   KENEKRSRRVTKRTERVHAVTI-EAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKD 119

Query: 604  CEAKRGRDSRKRPVE----AVKDITDSVVRSRKNKAKRLSLDKRISLRTXXXXXXXXXXQ 771
               KR   +RKR VE    A K++ D+VV++R+ K+KRL+LD+RI+L            +
Sbjct: 120  HLVKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLASSE 179

Query: 772  KIRSREDEEVEKIHRLLREYANSSDIVSLDWKKMKIPPVLPSSEHVWLFKLMQPMKEILE 951
            + + +ED E EKI +L+REY+ ++D+ SLDWKKMKIPPVLPSSEH WLFKLMQPMK IL+
Sbjct: 180  RRKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQ 239

Query: 952  VKKNLKNDLGREPTDGESAQAFNVHLFELKKNMEVGQAARNKLIKHNLRLVLFVMNKYFQ 1131
            VK+NL+NDLGREPTDGE A+A N+   EL+K +E G+AARNKLIKHNLRLVLFVMNKYFQ
Sbjct: 240  VKENLQNDLGREPTDGEVAEATNIDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKYFQ 299

Query: 1132 DFVQGPKFQDLCQAGVKGLITAIDRFEPNRRLRLSTYGLFWIRHAIIRSMTVSSFTKVPF 1311
            DF    +FQDLCQAGVKGLITAIDRFEPNR+ RLSTYGLFWIRHAIIRSMT SSFTKVPF
Sbjct: 300  DFANASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPF 359

Query: 1312 GLESVRVEIQKAKLELLFELQRLPTEIEIIERVRISPERYNEVMNASKSAVSLNARHSIT 1491
            GLES+RVEIQKAKLELLFELQR+PT+ EII+RV  SPERY+EVM  SK   SL+AR+  T
Sbjct: 360  GLESIRVEIQKAKLELLFELQRIPTDDEIIKRVGFSPERYHEVMKVSKPIFSLHARNKTT 419

Query: 1492 QEEFINGITDVDGVEGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGE 1671
            QEE INGITDVDGV+GDKR+QPA             KPKESLVIRQRYGLDGKGDRTLGE
Sbjct: 420  QEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 479

Query: 1672 IAGNLNISREMVRKHEVKALMKLKHPTRVDYLRQYVF 1782
            IAGNLNISREMVRKHEVKALMKLKHPTRVDY+R+Y+F
Sbjct: 480  IAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYIF 516


>XP_016564454.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Capsicum annuum]
          Length = 516

 Score =  675 bits (1741), Expect = 0.0
 Identities = 351/517 (67%), Positives = 417/517 (80%), Gaps = 4/517 (0%)
 Frame = +1

Query: 244  MGVVTVSSSATRTRLGLNSIFSTDTTPLKRMSVVSFKTDKPKNASLIVTQESLSLPRDNS 423
            MGVVTVSSSA+R+ LGL++ F+    PLKR  +VSFK DK KN +L+  +ES+SLP + S
Sbjct: 1    MGVVTVSSSASRSPLGLSTRFAARLCPLKRPVIVSFKKDKTKNTTLVAPKESISLPIETS 60

Query: 424  KGNKKKLRQAKKKPERVQATTIDEVAPTTIELDYSEAAAKLESIYKRCHESSSCDTLVKD 603
            K N+K+ R+  K+PERV A ++ E  P+T ELDYSEAAAKLESIYKR  E++S +T VKD
Sbjct: 61   KENEKRSRRVSKRPERVHAVSM-EAFPSTSELDYSEAAAKLESIYKRSLETASSNTEVKD 119

Query: 604  CEAKRGRDSRKRPVE----AVKDITDSVVRSRKNKAKRLSLDKRISLRTXXXXXXXXXXQ 771
               KR   +RKR VE    A +++ ++VV++R+ K+KRL+LD+RI+L            +
Sbjct: 120  RLVKRRPRTRKRIVEGDEEAKREVANNVVKNRRKKSKRLNLDQRIALLKNKDGEMVTSSE 179

Query: 772  KIRSREDEEVEKIHRLLREYANSSDIVSLDWKKMKIPPVLPSSEHVWLFKLMQPMKEILE 951
            + + +ED E EKI +L+REY+ ++D+ SLDWKKMKIPPVLPSSEH WLFKLMQPMK +L+
Sbjct: 180  RRKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAVLQ 239

Query: 952  VKKNLKNDLGREPTDGESAQAFNVHLFELKKNMEVGQAARNKLIKHNLRLVLFVMNKYFQ 1131
            VK+NL++DLGREPTDGE A A ++   EL+K +EVG+AARNKLIKHNLRLVLFVMNKYFQ
Sbjct: 240  VKENLQSDLGREPTDGEVADATSMDASELRKKLEVGRAARNKLIKHNLRLVLFVMNKYFQ 299

Query: 1132 DFVQGPKFQDLCQAGVKGLITAIDRFEPNRRLRLSTYGLFWIRHAIIRSMTVSSFTKVPF 1311
            DF  G +FQDLCQAGVKGLITAIDRFEPNR+ RLSTYGLFWIRHAIIRSMT SSFTKVPF
Sbjct: 300  DFANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPF 359

Query: 1312 GLESVRVEIQKAKLELLFELQRLPTEIEIIERVRISPERYNEVMNASKSAVSLNARHSIT 1491
            GLES+RVEIQKAKLELLFELQR+PTE EIIE V +SPERY+EVM  SK   SL+AR+  T
Sbjct: 360  GLESIRVEIQKAKLELLFELQRVPTEEEIIETVGLSPERYHEVMKVSKPVSSLHARNMTT 419

Query: 1492 QEEFINGITDVDGVEGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGE 1671
            QEE INGITDVDGV+GDKR+QPA             KPKESLVIRQRYGLDGKGDRTLGE
Sbjct: 420  QEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 479

Query: 1672 IAGNLNISREMVRKHEVKALMKLKHPTRVDYLRQYVF 1782
            IAGNLNISREMVRKHEVKALMKLKHPTRVDYLR+Y+F
Sbjct: 480  IAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYIF 516


>XP_004234179.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial isoform X1 [Solanum
            lycopersicum]
          Length = 516

 Score =  671 bits (1732), Expect = 0.0
 Identities = 352/517 (68%), Positives = 412/517 (79%), Gaps = 4/517 (0%)
 Frame = +1

Query: 244  MGVVTVSSSATRTRLGLNSIFSTDTTPLKRMSVVSFKTDKPKNASLIVTQESLSLPRDNS 423
            MGVVTVSSSA+R+ LGL+S FS    PLKR  +VSFK D  KN +L+  +ES+S P + S
Sbjct: 1    MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETS 60

Query: 424  KGNKKKLRQAKKKPERVQATTIDEVAPTTIELDYSEAAAKLESIYKRCHESSSCDTLVKD 603
            K N+K+ R+  K+ ERV A TI E  P+T+ELDYSEAAAKLESIYKR  E++S +T VKD
Sbjct: 61   KENEKRSRRVSKRTERVHAVTI-EAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKD 119

Query: 604  CEAKRGRDSRKRPVE----AVKDITDSVVRSRKNKAKRLSLDKRISLRTXXXXXXXXXXQ 771
               KR   +RKR VE    A K++ D+VV++R+ K+KRL+LD+RI+L            +
Sbjct: 120  HLVKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLASSE 179

Query: 772  KIRSREDEEVEKIHRLLREYANSSDIVSLDWKKMKIPPVLPSSEHVWLFKLMQPMKEILE 951
            + +  ED E EKI +L+REY+ ++D+ SLDWKKMKIPPVLPSSEH WLFKLMQPMK IL+
Sbjct: 180  RRKLNEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQ 239

Query: 952  VKKNLKNDLGREPTDGESAQAFNVHLFELKKNMEVGQAARNKLIKHNLRLVLFVMNKYFQ 1131
            VK+NL+NDLGREPTDGE A+A N+   EL+K +E G+AARNKLIKHNLRLVLFVMNKYFQ
Sbjct: 240  VKENLQNDLGREPTDGEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKYFQ 299

Query: 1132 DFVQGPKFQDLCQAGVKGLITAIDRFEPNRRLRLSTYGLFWIRHAIIRSMTVSSFTKVPF 1311
            DF    +FQDLCQAGVKGLITAIDRFEPNR+ RLSTYGLFWIRHAIIR MT SSFTKVPF
Sbjct: 300  DFANASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRYMTTSSFTKVPF 359

Query: 1312 GLESVRVEIQKAKLELLFELQRLPTEIEIIERVRISPERYNEVMNASKSAVSLNARHSIT 1491
            GLES+RVEIQKAKLELLFELQR+PT+ EII+RV  SPERY+EVM  SK   SL+AR+  T
Sbjct: 360  GLESIRVEIQKAKLELLFELQRIPTDDEIIKRVGFSPERYHEVMKVSKPIFSLHARNKTT 419

Query: 1492 QEEFINGITDVDGVEGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGE 1671
            QEE INGITDVDGV+GDKR+QPA             KPKESLVIRQRYGLDGKGDRTLGE
Sbjct: 420  QEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 479

Query: 1672 IAGNLNISREMVRKHEVKALMKLKHPTRVDYLRQYVF 1782
            IAGNLNISREMVRKHEVKALMKLKHPTRVDY+R+Y+F
Sbjct: 480  IAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYIF 516


>CDP05091.1 unnamed protein product [Coffea canephora]
          Length = 530

 Score =  666 bits (1719), Expect = 0.0
 Identities = 355/530 (66%), Positives = 410/530 (77%), Gaps = 17/530 (3%)
 Frame = +1

Query: 244  MGVVTVSSSATRTRLGLNSIFSTDTTPLKRMSVVSFKTDKPKNASLIVTQESLSLPRDNS 423
            MGVVTVSSSA R+ LGLN+  +T  +  +R S+V FK  K KNA+L+  +ESLSLP + S
Sbjct: 1    MGVVTVSSSAARSPLGLNAKLATRISQPRRPSLVPFKNGKTKNAALVAPRESLSLPVEGS 60

Query: 424  KGNKKKLRQAKKKPERVQATTIDEVAPTTIELDYSEAAAKLESIYKRCHESSSCDTLVKD 603
              N+K+L++  K+PERV+A +  E A +T+ELDY+EAAAKLE+IYK    +   D  V D
Sbjct: 61   NVNEKRLKRVVKRPERVKAVSALEAASSTLELDYNEAAAKLENIYKLSPATKVSDMEVND 120

Query: 604  CEAKRGRDSRKRP----VEAVKDITDSVVRSRKNKAKRLSLDKRISLRTXXXXXXXXXXQ 771
               KR +  RKR     VEA K    +VVRS + K+KRLSLDKR++LR           Q
Sbjct: 121  LGMKRDQQRRKRMKEANVEAEKGTNYTVVRSPRKKSKRLSLDKRVTLRKKRDSEAISSSQ 180

Query: 772  KIRSRE-------------DEEVEKIHRLLREYANSSDIVSLDWKKMKIPPVLPSSEHVW 912
            K +S E             D+E EKI+RLLREY+ S+D  SLDWKKMKIPPVLPSSEH W
Sbjct: 181  KRKSSEGDEDEEINRKSSEDDEDEKINRLLREYSGSTDFTSLDWKKMKIPPVLPSSEHSW 240

Query: 913  LFKLMQPMKEILEVKKNLKNDLGREPTDGESAQAFNVHLFELKKNMEVGQAARNKLIKHN 1092
            LFKLMQPMK I++VK+NL NDLGREPTDGE A+A N+ +  L+K+++VGQAARNKLIKHN
Sbjct: 241  LFKLMQPMKAIIQVKENLPNDLGREPTDGELAEATNLDVLHLRKDIKVGQAARNKLIKHN 300

Query: 1093 LRLVLFVMNKYFQDFVQGPKFQDLCQAGVKGLITAIDRFEPNRRLRLSTYGLFWIRHAII 1272
            LRLVLFVMNKYFQDF  GPKFQDLCQAGVKGLITAIDRFEP R+ RLSTYGLFWIRHAII
Sbjct: 301  LRLVLFVMNKYFQDFTNGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAII 360

Query: 1273 RSMTVSSFTKVPFGLESVRVEIQKAKLELLFELQRLPTEIEIIERVRISPERYNEVMNAS 1452
            RSMT+SS TKV FGL+SVR+EIQ+AKLELLFELQR+PTE EIIERV ISPERY+EVM  S
Sbjct: 361  RSMTLSSLTKVSFGLDSVRIEIQRAKLELLFELQRMPTEDEIIERVGISPERYHEVMRVS 420

Query: 1453 KSAVSLNARHSITQEEFINGITDVDGVEGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQR 1632
               +SL+ARHS TQEEFINGITDVDGVEG+KRRQPA             KPKESLVIRQR
Sbjct: 421  NPILSLHARHSATQEEFINGITDVDGVEGEKRRQPALLRLALDDVLDSLKPKESLVIRQR 480

Query: 1633 YGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRQYVF 1782
            YGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHP RVDYLR+YV+
Sbjct: 481  YGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYVY 530


>XP_011084487.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Sesamum indicum]
          Length = 518

 Score =  654 bits (1686), Expect = 0.0
 Identities = 344/517 (66%), Positives = 406/517 (78%), Gaps = 4/517 (0%)
 Frame = +1

Query: 244  MGVVTVSSSATRTRLGLNSIFSTDTTPLKRMSVVSFKTDKPKNASLIVTQESLSLPRDNS 423
            MGVVTVSSSA RT LGL++ + T  +  +R  ++SFK DK KN +LI  +ES++LP +  
Sbjct: 1    MGVVTVSSSAARTPLGLDARYLTRVSLCRRQVILSFKNDKNKNIALIAPRESVALPLEAK 60

Query: 424  KGNKKKLRQAKKKPERVQATTIDEVAPTTIELDYSEAAAKLESIYKRCHESSSCDTLVKD 603
            K  +K+ R+ KK  ERV A + DE +P+TI+LDY+EAAAKLE IYKR   ++     VKD
Sbjct: 61   KEKEKRSRKVKKLVERVSAVSTDEASPSTIDLDYNEAAAKLEYIYKRSPATTVSLEEVKD 120

Query: 604  CEAKRGRDSRKRP---VEAVKDITDSVVRSRKNKAKRLSLDKRISLRTXXXXXXXXXX-Q 771
               KR R  RKR     EA K   D VVRS++ K +RL+L+KRI+L+T           Q
Sbjct: 121  QRVKRRRPLRKRTGEAEEAEKKTADDVVRSKRKKERRLTLEKRIALKTNKEVDFLASSSQ 180

Query: 772  KIRSREDEEVEKIHRLLREYANSSDIVSLDWKKMKIPPVLPSSEHVWLFKLMQPMKEILE 951
            K + R+++E EKI RL+R+Y+ S+D+VSLDWKKMKIPPVLPSSEH WLFKLMQPMK IL+
Sbjct: 181  KRKQRKNDEDEKIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQ 240

Query: 952  VKKNLKNDLGREPTDGESAQAFNVHLFELKKNMEVGQAARNKLIKHNLRLVLFVMNKYFQ 1131
            VK+NL+NDLGRE TD E A+A   +  +L+K +EVG+AARNKLIKHNLRLVLFVMNKYFQ
Sbjct: 241  VKENLQNDLGREVTDDELAEATKTNAVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQ 300

Query: 1132 DFVQGPKFQDLCQAGVKGLITAIDRFEPNRRLRLSTYGLFWIRHAIIRSMTVSSFTKVPF 1311
            DF  GP+FQDLCQAGVKGLITAIDRFEP R+ RLSTY LFWIRHAIIRSMT+SSFTKV F
Sbjct: 301  DFSNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYSLFWIRHAIIRSMTLSSFTKVSF 360

Query: 1312 GLESVRVEIQKAKLELLFELQRLPTEIEIIERVRISPERYNEVMNASKSAVSLNARHSIT 1491
            GLESVRVEIQKAKLELLFELQRLP++ EI+ RV ISPERY+EVM  SK   SL+ARH++T
Sbjct: 361  GLESVRVEIQKAKLELLFELQRLPSDEEIVNRVGISPERYHEVMRVSKPISSLHARHAVT 420

Query: 1492 QEEFINGITDVDGVEGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGE 1671
            QEEFINGI+DVD VEGDKRRQPA             KPKESLVIRQRYGLDGKGDRTLGE
Sbjct: 421  QEEFINGISDVDDVEGDKRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 480

Query: 1672 IAGNLNISREMVRKHEVKALMKLKHPTRVDYLRQYVF 1782
            IAGNLNISREMVRKHEVKALMKLKHP R+DYLR+Y++
Sbjct: 481  IAGNLNISREMVRKHEVKALMKLKHPARIDYLRRYIY 517


>XP_015070569.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial isoform X2 [Solanum
            pennellii]
          Length = 487

 Score =  650 bits (1678), Expect = 0.0
 Identities = 346/517 (66%), Positives = 401/517 (77%), Gaps = 4/517 (0%)
 Frame = +1

Query: 244  MGVVTVSSSATRTRLGLNSIFSTDTTPLKRMSVVSFKTDKPKNASLIVTQESLSLPRDNS 423
            MGVVTVSSSA+R+ LGL+S FS    PLKR  +VSFK DK KN +L+  +ES+SLP + S
Sbjct: 1    MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDKTKNTTLVSPKESISLPIETS 60

Query: 424  KGNKKKLRQAKKKPERVQATTIDEVAPTTIELDYSEAAAKLESIYKRCHESSSCDTLVKD 603
            K N+K+ R+  K+ ERV A TI E  P+T+ELDYSEAAAKLESIYKR  E++S +T VKD
Sbjct: 61   KENEKRSRRVTKRTERVHAVTI-EAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKD 119

Query: 604  CEAKRGRDSRKRPVE----AVKDITDSVVRSRKNKAKRLSLDKRISLRTXXXXXXXXXXQ 771
               KR   +RKR VE    A K++ D+VV++R+ K+KRL+LD+RI+L             
Sbjct: 120  HLVKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIAL------------- 166

Query: 772  KIRSREDEEVEKIHRLLREYANSSDIVSLDWKKMKIPPVLPSSEHVWLFKLMQPMKEILE 951
                            L+    ++D+ SLDWKKMKIPPVLPSSEH WLFKLMQPMK IL+
Sbjct: 167  ----------------LKNKEGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQ 210

Query: 952  VKKNLKNDLGREPTDGESAQAFNVHLFELKKNMEVGQAARNKLIKHNLRLVLFVMNKYFQ 1131
            VK+NL+NDLGREPTDGE A+A N+   EL+K +E G+AARNKLIKHNLRLVLFVMNKYFQ
Sbjct: 211  VKENLQNDLGREPTDGEVAEATNIDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKYFQ 270

Query: 1132 DFVQGPKFQDLCQAGVKGLITAIDRFEPNRRLRLSTYGLFWIRHAIIRSMTVSSFTKVPF 1311
            DF    +FQDLCQAGVKGLITAIDRFEPNR+ RLSTYGLFWIRHAIIRSMT SSFTKVPF
Sbjct: 271  DFANASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPF 330

Query: 1312 GLESVRVEIQKAKLELLFELQRLPTEIEIIERVRISPERYNEVMNASKSAVSLNARHSIT 1491
            GLES+RVEIQKAKLELLFELQR+PT+ EII+RV  SPERY+EVM  SK   SL+AR+  T
Sbjct: 331  GLESIRVEIQKAKLELLFELQRIPTDDEIIKRVGFSPERYHEVMKVSKPIFSLHARNKTT 390

Query: 1492 QEEFINGITDVDGVEGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGE 1671
            QEE INGITDVDGV+GDKR+QPA             KPKESLVIRQRYGLDGKGDRTLGE
Sbjct: 391  QEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 450

Query: 1672 IAGNLNISREMVRKHEVKALMKLKHPTRVDYLRQYVF 1782
            IAGNLNISREMVRKHEVKALMKLKHPTRVDY+R+Y+F
Sbjct: 451  IAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYIF 487


>XP_002268709.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Vitis vinifera] CBI22546.3
            unnamed protein product, partial [Vitis vinifera]
          Length = 518

 Score =  645 bits (1663), Expect = 0.0
 Identities = 340/519 (65%), Positives = 406/519 (78%), Gaps = 6/519 (1%)
 Frame = +1

Query: 244  MGVVTVSSSAT--RTRLGLNSIFSTDTTPLKRMSVVSFKTDKPKNASLIVTQESLSLPRD 417
            MGVVTVSSSA+  RT  GLN+ FS   TPL+R  V++FK DK KN +L+   E + LP +
Sbjct: 1    MGVVTVSSSASASRTPFGLNAKFSNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIE 60

Query: 418  NSKGNKKKLRQAKKKPERVQATTIDEVAPTTIELDYSEAAAKLESIYKRCHESSSCDTLV 597
             SK +KK+LR+A K  +RV+A + DEV+P ++ELDY+EAAAKLE+IYK    +   +   
Sbjct: 61   TSKDHKKRLRRASKPSKRVKAVSTDEVSPCSVELDYNEAAAKLENIYKLSPATDVSEAED 120

Query: 598  KDCEAKRGRDSRKRPV----EAVKDITDSVVRSRKNKAKRLSLDKRISLRTXXXXXXXXX 765
             +   +RGR  RKR      +A K+++D+VVR    K KRLSL+KRI+L           
Sbjct: 121  LERVVRRGRQRRKRVTLADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEKAVAS 180

Query: 766  XQKIRSREDEEVEKIHRLLREYANSSDIVSLDWKKMKIPPVLPSSEHVWLFKLMQPMKEI 945
             QK R  ++E+ E I  L+REY+ S+D+VSLDWKKMKIPPVLP SEH WLFKLMQPMK +
Sbjct: 181  IQKKRDSKNED-ENIDVLVREYSASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMKGL 239

Query: 946  LEVKKNLKNDLGREPTDGESAQAFNVHLFELKKNMEVGQAARNKLIKHNLRLVLFVMNKY 1125
            LEVK NL+ DLGREPTDGE A+A ++   +++++MEVGQAARNKLIKHNLRLVLFV+NKY
Sbjct: 240  LEVKDNLQKDLGREPTDGELAEAMSMSAVQVRRHMEVGQAARNKLIKHNLRLVLFVINKY 299

Query: 1126 FQDFVQGPKFQDLCQAGVKGLITAIDRFEPNRRLRLSTYGLFWIRHAIIRSMTVSSFTKV 1305
            FQ+F  GPKFQDLCQAGVKGLITAIDRFEP R  RLSTYGLFWIRHAI+RSMT+SSFT+V
Sbjct: 300  FQEFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIMRSMTLSSFTRV 359

Query: 1306 PFGLESVRVEIQKAKLELLFELQRLPTEIEIIERVRISPERYNEVMNASKSAVSLNARHS 1485
             FGLESVRVEIQ+AKLELLF+LQRLPTE EIIE+V ISPERY+EVM ASKS +SL+ARH+
Sbjct: 360  SFGLESVRVEIQRAKLELLFKLQRLPTEEEIIEKVGISPERYHEVMRASKSVLSLHARHA 419

Query: 1486 ITQEEFINGITDVDGVEGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTL 1665
             TQEE+INGITDV+GV GD+ RQ A             KPKESLV+RQRYGLDGKGDRTL
Sbjct: 420  TTQEEYINGITDVEGVGGDRGRQLALLRLALDDVLDSLKPKESLVMRQRYGLDGKGDRTL 479

Query: 1666 GEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRQYVF 1782
            GEIAGNL+ISREMVRKHEVKALMKLKHP RVDYLRQY+F
Sbjct: 480  GEIAGNLSISREMVRKHEVKALMKLKHPARVDYLRQYIF 518


>XP_004234180.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial isoform X2 [Solanum
            lycopersicum]
          Length = 487

 Score =  642 bits (1657), Expect = 0.0
 Identities = 343/517 (66%), Positives = 398/517 (76%), Gaps = 4/517 (0%)
 Frame = +1

Query: 244  MGVVTVSSSATRTRLGLNSIFSTDTTPLKRMSVVSFKTDKPKNASLIVTQESLSLPRDNS 423
            MGVVTVSSSA+R+ LGL+S FS    PLKR  +VSFK D  KN +L+  +ES+S P + S
Sbjct: 1    MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETS 60

Query: 424  KGNKKKLRQAKKKPERVQATTIDEVAPTTIELDYSEAAAKLESIYKRCHESSSCDTLVKD 603
            K N+K+ R+  K+ ERV A TI E  P+T+ELDYSEAAAKLESIYKR  E++S +T VKD
Sbjct: 61   KENEKRSRRVSKRTERVHAVTI-EAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKD 119

Query: 604  CEAKRGRDSRKRPVE----AVKDITDSVVRSRKNKAKRLSLDKRISLRTXXXXXXXXXXQ 771
               KR   +RKR VE    A K++ D+VV++R+ K+KRL+LD+RI+L             
Sbjct: 120  HLVKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIAL------------- 166

Query: 772  KIRSREDEEVEKIHRLLREYANSSDIVSLDWKKMKIPPVLPSSEHVWLFKLMQPMKEILE 951
                            L+    ++D+ SLDWKKMKIPPVLPSSEH WLFKLMQPMK IL+
Sbjct: 167  ----------------LKNKEGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQ 210

Query: 952  VKKNLKNDLGREPTDGESAQAFNVHLFELKKNMEVGQAARNKLIKHNLRLVLFVMNKYFQ 1131
            VK+NL+NDLGREPTDGE A+A N+   EL+K +E G+AARNKLIKHNLRLVLFVMNKYFQ
Sbjct: 211  VKENLQNDLGREPTDGEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKYFQ 270

Query: 1132 DFVQGPKFQDLCQAGVKGLITAIDRFEPNRRLRLSTYGLFWIRHAIIRSMTVSSFTKVPF 1311
            DF    +FQDLCQAGVKGLITAIDRFEPNR+ RLSTYGLFWIRHAIIR MT SSFTKVPF
Sbjct: 271  DFANASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRYMTTSSFTKVPF 330

Query: 1312 GLESVRVEIQKAKLELLFELQRLPTEIEIIERVRISPERYNEVMNASKSAVSLNARHSIT 1491
            GLES+RVEIQKAKLELLFELQR+PT+ EII+RV  SPERY+EVM  SK   SL+AR+  T
Sbjct: 331  GLESIRVEIQKAKLELLFELQRIPTDDEIIKRVGFSPERYHEVMKVSKPIFSLHARNKTT 390

Query: 1492 QEEFINGITDVDGVEGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGE 1671
            QEE INGITDVDGV+GDKR+QPA             KPKESLVIRQRYGLDGKGDRTLGE
Sbjct: 391  QEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 450

Query: 1672 IAGNLNISREMVRKHEVKALMKLKHPTRVDYLRQYVF 1782
            IAGNLNISREMVRKHEVKALMKLKHPTRVDY+R+Y+F
Sbjct: 451  IAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYIF 487


>XP_012858574.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Erythranthe guttata]
            EYU19623.1 hypothetical protein MIMGU_mgv1a020453mg
            [Erythranthe guttata]
          Length = 515

 Score =  642 bits (1655), Expect = 0.0
 Identities = 336/515 (65%), Positives = 407/515 (79%), Gaps = 2/515 (0%)
 Frame = +1

Query: 244  MGVVTVSSSATRTRLGLNSIFSTDTTPLKRMSVVSFKTDKPKNASLIVTQESLSLPRDNS 423
            MGVVTVS+SA+RT LGLN  + T  + L+R  V +FK DK K   LI  +ES +LP + +
Sbjct: 1    MGVVTVSTSASRTSLGLNERYLTRVSILRRPVVFAFKNDKIKKIVLISPRESAALPLEAT 60

Query: 424  KGNKKKLRQAKKKPERVQATTIDEVAPTTIELDYSEAAAKLESIYKRCHESSSCDTLVKD 603
            K N+K+LR+ KK+ ERV A + DE  P+TI+LDY+EAAAKLE I+K+          VKD
Sbjct: 61   KDNEKRLRKVKKRAERVNAVSTDEAPPSTIDLDYNEAAAKLEYIFKQSPTVEISVDEVKD 120

Query: 604  CEAKRGRDSRKRP--VEAVKDITDSVVRSRKNKAKRLSLDKRISLRTXXXXXXXXXXQKI 777
               KR R  RKR    +  + I D+VVRSR++K +RL+L+KRI+LRT          Q+ 
Sbjct: 121  VRVKR-RQPRKRTEYADEAEKIADNVVRSRRSKDRRLNLEKRIALRTKKEDESTAIFQRR 179

Query: 778  RSREDEEVEKIHRLLREYANSSDIVSLDWKKMKIPPVLPSSEHVWLFKLMQPMKEILEVK 957
            ++ +++E EKI RL+R+Y+ SSD+VSLDWKKMKIPPVLPS+EHVWLFKLMQP+K IL+VK
Sbjct: 180  KTGKNDEDEKIDRLVRDYSASSDLVSLDWKKMKIPPVLPSAEHVWLFKLMQPVKAILDVK 239

Query: 958  KNLKNDLGREPTDGESAQAFNVHLFELKKNMEVGQAARNKLIKHNLRLVLFVMNKYFQDF 1137
            + ++N+LGREPTD + A A N+   +L+K +E+G+AARNKLIKHNLRLVLFVMNKYFQDF
Sbjct: 240  ETIENNLGREPTDEKLATAINMDTVQLRKQLEIGRAARNKLIKHNLRLVLFVMNKYFQDF 299

Query: 1138 VQGPKFQDLCQAGVKGLITAIDRFEPNRRLRLSTYGLFWIRHAIIRSMTVSSFTKVPFGL 1317
              G +FQDLCQAG KGLITAIDRFEP R+LRLSTYGLFWIRH+IIRSMT+SSFTKV FGL
Sbjct: 300  SNGSRFQDLCQAGAKGLITAIDRFEPKRKLRLSTYGLFWIRHSIIRSMTLSSFTKVSFGL 359

Query: 1318 ESVRVEIQKAKLELLFELQRLPTEIEIIERVRISPERYNEVMNASKSAVSLNARHSITQE 1497
            ESVRVEI+KAKLEL+FEL+RLPT+ EI+ RV IS ERY+EVM  SK  +SL+ARHS+TQE
Sbjct: 360  ESVRVEIRKAKLELMFELKRLPTDEEIVGRVGISQERYHEVMRVSKPIISLHARHSVTQE 419

Query: 1498 EFINGITDVDGVEGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIA 1677
            EFINGITDVDGVEGD+R+QPA             KPKE+LVIRQRYGLDGKGDRTLGEIA
Sbjct: 420  EFINGITDVDGVEGDRRKQPALLRLALDDVLDSLKPKENLVIRQRYGLDGKGDRTLGEIA 479

Query: 1678 GNLNISREMVRKHEVKALMKLKHPTRVDYLRQYVF 1782
            GNLNISREMVRK+EVKALMKLKH  RVDYLR+YVF
Sbjct: 480  GNLNISREMVRKYEVKALMKLKHRARVDYLRRYVF 514


>XP_007219010.1 hypothetical protein PRUPE_ppa004259mg [Prunus persica] ONI25507.1
            hypothetical protein PRUPE_2G307500 [Prunus persica]
          Length = 519

 Score =  629 bits (1623), Expect = 0.0
 Identities = 329/519 (63%), Positives = 405/519 (78%), Gaps = 7/519 (1%)
 Frame = +1

Query: 244  MGVVTVSSSATRTRLGLNSIFSTDTTPLKRMSVVSFKTDKPKNASLIVTQESLSLPRDNS 423
            MGVVTVSSSA+RT LGL++  +   + L++  +V+FKTD+    +L+  QE + LP +  
Sbjct: 1    MGVVTVSSSASRTPLGLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETR 60

Query: 424  KGNKKKLRQAKKKPERVQATTIDEVAPTTIELDYSEAAAKLESIYKRCHESSSCDTLVKD 603
            K ++K+L +A+K  + V++ T D  +P T+E+DY+EAAAKLE++YKR  E+ + ++ V+D
Sbjct: 61   KKHQKRLGKARKLAKSVKSATTDVASPCTLEVDYNEAAAKLENLYKRSPETEA-NSDVED 119

Query: 604  CEA--KRGRDSRKRPVEAVKD-----ITDSVVRSRKNKAKRLSLDKRISLRTXXXXXXXX 762
             +   +RGR  RK+  E+  D      +++VVR+R  KAKRLSL+KR++L+         
Sbjct: 120  VDGLMRRGRKRRKKTSESDADKDENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVIS 179

Query: 763  XXQKIRSREDEEVEKIHRLLREYANSSDIVSLDWKKMKIPPVLPSSEHVWLFKLMQPMKE 942
               + R     E EKI  L+REY+ S+D+VSLDWKKMKIPPVL SSEH WLFKLMQPMK 
Sbjct: 180  SIVRKRKSRKNENEKIEELVREYSTSTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKG 239

Query: 943  ILEVKKNLKNDLGREPTDGESAQAFNVHLFELKKNMEVGQAARNKLIKHNLRLVLFVMNK 1122
            +LEVK+NL+ DLGREPT+GE A+A N+ + ++KK++EVG+AAR+KLIKHNLRLVLFVMNK
Sbjct: 240  LLEVKENLQKDLGREPTNGELAEATNMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVMNK 299

Query: 1123 YFQDFVQGPKFQDLCQAGVKGLITAIDRFEPNRRLRLSTYGLFWIRHAIIRSMTVSSFTK 1302
            YFQDF  GPKFQDLCQAGVKGLITAIDRFEP R  RLSTYGLFWIRHAIIRSMT+SSFT+
Sbjct: 300  YFQDFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTR 359

Query: 1303 VPFGLESVRVEIQKAKLELLFELQRLPTEIEIIERVRISPERYNEVMNASKSAVSLNARH 1482
            V FGLESVR EIQKAKL +LF L+R+PTE EIIE+V ISPERY+EVM ASK   SL++RH
Sbjct: 360  VSFGLESVRAEIQKAKLGMLFALKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLHSRH 419

Query: 1483 SITQEEFINGITDVDGVEGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRT 1662
            + TQEEFINGITDVDGVEGD R++PA             KPKESLVIRQRYGLDGKGDRT
Sbjct: 420  TTTQEEFINGITDVDGVEGDNRQKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRT 479

Query: 1663 LGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRQYV 1779
            LGEIAGNLNISREMVRKHEVKALMKLKHP RVDYLR+YV
Sbjct: 480  LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYV 518


>XP_010266467.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Nelumbo nucifera]
          Length = 514

 Score =  627 bits (1618), Expect = 0.0
 Identities = 332/518 (64%), Positives = 403/518 (77%), Gaps = 5/518 (0%)
 Frame = +1

Query: 244  MGVVTVSSSATRTRLGLNSIFSTDTTPLKRMSVVSFKTDKPKNASLIVTQESLSLPRDNS 423
            MGVVTVSSS+++T LGL+S FS   T LKR  +++FKTDK K+ +L+   E + LP D  
Sbjct: 1    MGVVTVSSSSSQTPLGLSSRFSVHQTQLKRPLILAFKTDKAKDRALVTHHEPIPLPMDTP 60

Query: 424  KGNKKKLRQAKKKPERVQATTIDEVAPTTIELDYSEAAAKLESIYKRCHESSSCDTLVKD 603
            K N+K+LR+A K  +RV+    DE +  TIE+DY++ AAKLESIYK    +   D    D
Sbjct: 61   KENQKRLRRATKPSKRVKVVCSDEASSCTIEMDYNDVAAKLESIYKLSPPTDVSDVDDTD 120

Query: 604  CEAKRGRDSRKRPVEAV----KDITDSVVRSRKNKAKRLSLDKRISLRTXXXXXXXXXXQ 771
               +R R +RK+  EA     K+ +D+V+R+  NK KRLSLD+RI+LR            
Sbjct: 121  RVGRRRRRTRKKLGEADRKTGKESSDNVIRNH-NKNKRLSLDRRIALRRKKEEGAVQLSG 179

Query: 772  -KIRSREDEEVEKIHRLLREYANSSDIVSLDWKKMKIPPVLPSSEHVWLFKLMQPMKEIL 948
             K  S+ED +V+K   L+ EY+ S+D+ SLDWKKMKIPPVLPSSEH WLFKLMQPM  + 
Sbjct: 180  VKEGSKEDGDVDK---LVGEYSVSTDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMNALF 236

Query: 949  EVKKNLKNDLGREPTDGESAQAFNVHLFELKKNMEVGQAARNKLIKHNLRLVLFVMNKYF 1128
            ++K+NL  DLGREPTDGE A + N+ +F++++ +EVG+AARN+LIKHNLRLVLFV+NKYF
Sbjct: 237  QMKENLHRDLGREPTDGELADSTNMSVFQVRRCIEVGRAARNRLIKHNLRLVLFVINKYF 296

Query: 1129 QDFVQGPKFQDLCQAGVKGLITAIDRFEPNRRLRLSTYGLFWIRHAIIRSMTVSSFTKVP 1308
            Q+F  GPKFQDLCQAGVKGLITAIDRFEP RR RLSTYGLFWIRHAI+RSMT+SSFT+V 
Sbjct: 297  QEFANGPKFQDLCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIMRSMTLSSFTRVS 356

Query: 1309 FGLESVRVEIQKAKLELLFELQRLPTEIEIIERVRISPERYNEVMNASKSAVSLNARHSI 1488
            FGLESVRVEIQ+AKLEL+FEL+RLPTE EII++V ISPERY+EV+ ASK   SL++RH+I
Sbjct: 357  FGLESVRVEIQRAKLELMFELERLPTEEEIIKKVGISPERYHEVIKASKPVFSLHSRHAI 416

Query: 1489 TQEEFINGITDVDGVEGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLG 1668
            TQEEFINGITD++GV GDKRRQPA             KPKESLVIRQRYGLDGKGDRTLG
Sbjct: 417  TQEEFINGITDIEGVGGDKRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLG 476

Query: 1669 EIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRQYVF 1782
            EIAGNLNISREMVRKHEVKALMKLKHPTRVDYLR+Y+F
Sbjct: 477  EIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYIF 514


>XP_019415367.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Lupinus angustifolius]
            XP_019415368.1 PREDICTED: RNA polymerase sigma factor
            sigE, chloroplastic/mitochondrial [Lupinus angustifolius]
            OIV97973.1 hypothetical protein TanjilG_14073 [Lupinus
            angustifolius]
          Length = 514

 Score =  622 bits (1604), Expect = 0.0
 Identities = 330/517 (63%), Positives = 394/517 (76%), Gaps = 5/517 (0%)
 Frame = +1

Query: 244  MGVVTVSSSATRTRLGLNSIFSTDTTPLKRMSVVSFKTDKPKNASLIVTQESLSLPRDNS 423
            MGVVTVSSSA RT L LN+ FS+  +P KR  +V+FK DKP + +L+ TQE   +P +++
Sbjct: 1    MGVVTVSSSAARTPLRLNTKFSSQWSPSKRPLIVAFKGDKPNDTALVATQEKHRMPIESA 60

Query: 424  KGNKKKLRQAKKKPERVQATTIDEVAPTTIELDYSEAAAKLESIYKRCHESSSCDTLVKD 603
            K  KK++ +  K  +RV+A   +E++P+++++DY+EAA  LE+IYK    S  CD    D
Sbjct: 61   KTQKKRIGKVGKTSKRVRAVCAEEISPSSLDVDYNEAAVLLENIYKLSPASDICDEEFID 120

Query: 604  CEAKRGRDSRKRPVEAVKD---ITDSVVRSRKNKAKRLSLDKRISLRTXXXXXXXXXXQK 774
             + KR     K+     K+    +D VVR++K K KRLSLDKRI+L+           +K
Sbjct: 121  SKIKRALWRGKKGCYEDKEEELSSDRVVRNQKRKVKRLSLDKRIALKNKKDEEVIPSQKK 180

Query: 775  --IRSREDEEVEKIHRLLREYANSSDIVSLDWKKMKIPPVLPSSEHVWLFKLMQPMKEIL 948
              ++SR    +EKI  L+REY+ S+D+VSLDWKKM+IPPVLPSSEH WLFKLMQPMK +L
Sbjct: 181  RIVKSR----IEKIEELVREYSGSTDLVSLDWKKMRIPPVLPSSEHTWLFKLMQPMKVLL 236

Query: 949  EVKKNLKNDLGREPTDGESAQAFNVHLFELKKNMEVGQAARNKLIKHNLRLVLFVMNKYF 1128
             VK+ L  +LGREPTD E A A N+ L  +KK +E G+AARNKLIKHNLRLVLFV+NKYF
Sbjct: 237  PVKEGLLKELGREPTDVELADATNMSLVRVKKAIEAGRAARNKLIKHNLRLVLFVINKYF 296

Query: 1129 QDFVQGPKFQDLCQAGVKGLITAIDRFEPNRRLRLSTYGLFWIRHAIIRSMTVSSFTKVP 1308
             DF  GPKFQDLCQAGVKGLITAIDRFEPNR+ RLSTYGLFWIRHAIIRSMT+SSFT+VP
Sbjct: 297  PDFASGPKFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTLSSFTRVP 356

Query: 1309 FGLESVRVEIQKAKLELLFELQRLPTEIEIIERVRISPERYNEVMNASKSAVSLNARHSI 1488
            FGLESVR EIQKAKL L FELQR PTE EI +RV+ISPERY++V  ASKS +SLN+RHS+
Sbjct: 357  FGLESVRSEIQKAKLLLTFELQRPPTEEEIQKRVQISPERYHDVKKASKSVLSLNSRHSV 416

Query: 1489 TQEEFINGITDVDGVEGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLG 1668
            TQEEFINGITD DGV  DKRRQPA             KPKESLVIRQR+GLDGKGDRTLG
Sbjct: 417  TQEEFINGITDDDGVNSDKRRQPAILRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLG 476

Query: 1669 EIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRQYV 1779
            EIAGNLNISREMVRKHEVKALMKLKHPTR+DYLR YV
Sbjct: 477  EIAGNLNISREMVRKHEVKALMKLKHPTRLDYLRPYV 513


>XP_018505629.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X1 [Pyrus x
            bretschneideri]
          Length = 544

 Score =  622 bits (1603), Expect = 0.0
 Identities = 327/521 (62%), Positives = 402/521 (77%), Gaps = 8/521 (1%)
 Frame = +1

Query: 241  GMGVVTVSSSATRTRLGLNSIFSTDTTPLKRMSVVSFKTDKPKNASLIVTQESLSLPRDN 420
            GMGVVTVS+SA RT LGL++  ++  +P ++  +V+FKTD+    +L+  Q  + LP + 
Sbjct: 25   GMGVVTVSTSAARTPLGLSTKSTSQRSPFRKPWIVAFKTDESNKTALVAPQGKIPLPIET 84

Query: 421  SKGNKKKLRQAKKKPERVQATTIDEVAP-TTIELDYSEAAAKLESIYKRCHESSSCDTLV 597
             K ++K++ +A+K  + V++T  D  AP TT+E+DY+EAAAKLE++YKR  E  + D  V
Sbjct: 85   RKKHQKRIGKARKLAKSVKSTATDVAAPCTTLEVDYNEAAAKLENLYKRSPEIEA-DVDV 143

Query: 598  KDCEA--KRGRDSRKRPVEA-----VKDITDSVVRSRKNKAKRLSLDKRISLRTXXXXXX 756
            +D +   +RGR  RK+  E+      K  +D VVRS+  KAKRL+LDKR++L+       
Sbjct: 144  EDADGLLRRGRKRRKKTSESDHEKEEKRTSDIVVRSKTKKAKRLNLDKRVALKWNKDEKV 203

Query: 757  XXXXQKIRSREDEEVEKIHRLLREYANSSDIVSLDWKKMKIPPVLPSSEHVWLFKLMQPM 936
                QK R  +  E EKI  L+REY+ S+D+VSLDWKKMKIPPVL SSEH WLFKLMQPM
Sbjct: 204  VSSVQK-RKDQKNETEKIEELVREYSASTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPM 262

Query: 937  KEILEVKKNLKNDLGREPTDGESAQAFNVHLFELKKNMEVGQAARNKLIKHNLRLVLFVM 1116
            K + EV++ L+ DLG EPT+GE A+A N+ + ++KK+ EVG+AARNKLIKHNLRLVLFV+
Sbjct: 263  KGLHEVREQLQKDLGTEPTNGELAEATNMSVVQVKKHFEVGRAARNKLIKHNLRLVLFVI 322

Query: 1117 NKYFQDFVQGPKFQDLCQAGVKGLITAIDRFEPNRRLRLSTYGLFWIRHAIIRSMTVSSF 1296
            NKYFQDF  GPKFQDLCQAGV+GLITAIDRFEP R  RLSTYGLFWIRHAIIRSMTVSSF
Sbjct: 323  NKYFQDFANGPKFQDLCQAGVRGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTVSSF 382

Query: 1297 TKVPFGLESVRVEIQKAKLELLFELQRLPTEIEIIERVRISPERYNEVMNASKSAVSLNA 1476
            T+V FGLESVR EIQKAKLE++F L+R+PT+ EIIE+V ISPERY+EVM ASK   SL++
Sbjct: 383  TRVSFGLESVRAEIQKAKLEMMFSLKRMPTDEEIIEKVGISPERYHEVMRASKPVSSLHS 442

Query: 1477 RHSITQEEFINGITDVDGVEGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGD 1656
            RH+ TQEE+INGITDVDGVEGD RR+PA             KPKESLVIRQRYGLDGKGD
Sbjct: 443  RHATTQEEYINGITDVDGVEGDNRRKPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGD 502

Query: 1657 RTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRQYV 1779
            RTLGEIAGNLNISREMVRKHEVKALMKLKHP RVDYLR+Y+
Sbjct: 503  RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 543


>XP_004308009.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Fragaria vesca subsp. vesca]
          Length = 520

 Score =  620 bits (1598), Expect = 0.0
 Identities = 328/519 (63%), Positives = 396/519 (76%), Gaps = 7/519 (1%)
 Frame = +1

Query: 244  MGVVTVSSSATRTRLGLNS-IFSTDTTPLKRMSVVSFKTDKPKNASLIVTQESLSLPRDN 420
            MGVVTVSSS +RT LGL++ + S+  + L++  +V+F+TDK    +L+  QE + LP + 
Sbjct: 1    MGVVTVSSSVSRTPLGLSTNLVSSQRSTLRKPLIVAFRTDKSDKKALVAPQEKVPLPIET 60

Query: 421  SKGNKKKLRQAKKKPERVQATTIDEVAPTTIELDYSEAAAKLESIYKRCHESSSCDTL-V 597
             K  +K+L +A+K P+ V+A  I+E     +ELDY+EAAAKLE++YKR  E+ + D   V
Sbjct: 61   GKKVQKRLGKARKLPKSVKAALIEEAPTCDLELDYNEAAAKLENLYKRSPETEASDVENV 120

Query: 598  KDCEAKRGRDSRKRPVEAVKDIT-----DSVVRSRKNKAKRLSLDKRISLRTXXXXXXXX 762
                 KRGR  RK+  E    +      D VVRS   KAKRLSLDKR++L+         
Sbjct: 121  DGLMIKRGRKRRKKISEVDDKVEKRTSDDIVVRSVTKKAKRLSLDKRVALKWNKDEKVAA 180

Query: 763  XXQKIRSREDEEVEKIHRLLREYANSSDIVSLDWKKMKIPPVLPSSEHVWLFKLMQPMKE 942
               + R  +  E E +  L+REY+ S+D+VSLDWKKM+IPPVL SSEH WLFKLMQPMK 
Sbjct: 181  SVVRKRKDKRSENEMMEELVREYSASTDLVSLDWKKMRIPPVLSSSEHTWLFKLMQPMKG 240

Query: 943  ILEVKKNLKNDLGREPTDGESAQAFNVHLFELKKNMEVGQAARNKLIKHNLRLVLFVMNK 1122
            +LEVK+ L+ DLGREP  GE A+A N+ + ++K+++EVG+AARNKLIKHNLRLVLFV+NK
Sbjct: 241  LLEVKEILQKDLGREPNKGELAEATNMTVVQVKRHLEVGRAARNKLIKHNLRLVLFVINK 300

Query: 1123 YFQDFVQGPKFQDLCQAGVKGLITAIDRFEPNRRLRLSTYGLFWIRHAIIRSMTVSSFTK 1302
            YFQDF  GPKFQDLCQAGVKGLITAIDRFEP RR RLSTYGLFWIRHAIIRSMT+SSFT+
Sbjct: 301  YFQDFANGPKFQDLCQAGVKGLITAIDRFEPQRRFRLSTYGLFWIRHAIIRSMTLSSFTR 360

Query: 1303 VPFGLESVRVEIQKAKLELLFELQRLPTEIEIIERVRISPERYNEVMNASKSAVSLNARH 1482
            V FGLESVR EIQKAKLE+L +L+R+PTE EIIE+V ISPERY+EVM ASK   SLN+RH
Sbjct: 361  VSFGLESVRAEIQKAKLEMLVQLKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLNSRH 420

Query: 1483 SITQEEFINGITDVDGVEGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRT 1662
            S+TQEEFINGITDVDGV+GD RR+PA             KPKESLVIRQRYGLDGKGDRT
Sbjct: 421  SVTQEEFINGITDVDGVDGDNRRKPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGDRT 480

Query: 1663 LGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRQYV 1779
            LGEIAGNLNISREMVRKHEVKALMKLKHP RVDYLR+Y+
Sbjct: 481  LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 519


>XP_018503184.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X1 [Pyrus x
            bretschneideri]
          Length = 544

 Score =  620 bits (1600), Expect = 0.0
 Identities = 327/521 (62%), Positives = 402/521 (77%), Gaps = 8/521 (1%)
 Frame = +1

Query: 241  GMGVVTVSSSATRTRLGLNSIFSTDTTPLKRMSVVSFKTDKPKNASLIVTQESLSLPRDN 420
            GMGVVTVS+SA RT LGL++  ++  +P ++  +V+FKTD+    +L+  Q ++ LP + 
Sbjct: 25   GMGVVTVSTSAARTPLGLSTKSTSQRSPFRKPWIVAFKTDESNKTALVAPQGNIPLPIET 84

Query: 421  SKGNKKKLRQAKKKPERVQATTIDEVAP-TTIELDYSEAAAKLESIYKRCHESSSCDTLV 597
             K  +K++ +A+K  + V++T  D  AP TT+E+DY+EAAAKLE++YKR  E  + D  V
Sbjct: 85   RKKLQKRIGKARKLAKSVKSTATDVAAPCTTLEVDYNEAAAKLENLYKRSPEIEA-DVDV 143

Query: 598  KDCEA--KRGRDSRKRPVEA-----VKDITDSVVRSRKNKAKRLSLDKRISLRTXXXXXX 756
            +D +   +RGR  RK+  E+      K  +D VVRS+  KAKRL+LDKR++L+       
Sbjct: 144  EDADGLLRRGRKRRKKTSESDHEKEEKRTSDIVVRSKTKKAKRLNLDKRVALKWNKDEKV 203

Query: 757  XXXXQKIRSREDEEVEKIHRLLREYANSSDIVSLDWKKMKIPPVLPSSEHVWLFKLMQPM 936
                QK R  +  E EKI  L+REY+ S+D+VSLDWKKMKIPPVL SSEH WLFKLMQPM
Sbjct: 204  VSSVQK-RKDQKNETEKIEELVREYSASTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPM 262

Query: 937  KEILEVKKNLKNDLGREPTDGESAQAFNVHLFELKKNMEVGQAARNKLIKHNLRLVLFVM 1116
            K + EV++ L+ DLG EPT+GE A+A N+ + ++KK+ EVG+AARNKLIKHNLRLVLFV+
Sbjct: 263  KGLHEVREQLQKDLGTEPTNGELAEATNMSVVQVKKHFEVGRAARNKLIKHNLRLVLFVI 322

Query: 1117 NKYFQDFVQGPKFQDLCQAGVKGLITAIDRFEPNRRLRLSTYGLFWIRHAIIRSMTVSSF 1296
            NKYFQDF  GPKFQDLCQAGV+GLITAIDRFEP R  RLSTYGLFWIRHAIIRSMTVSSF
Sbjct: 323  NKYFQDFANGPKFQDLCQAGVRGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTVSSF 382

Query: 1297 TKVPFGLESVRVEIQKAKLELLFELQRLPTEIEIIERVRISPERYNEVMNASKSAVSLNA 1476
            T+V FGLESVR EIQKAKLE++F L+R+PT+ EIIE+V ISPERY+EVM ASK   SL++
Sbjct: 383  TRVSFGLESVRAEIQKAKLEMIFSLKRMPTDEEIIEKVGISPERYHEVMRASKPVSSLHS 442

Query: 1477 RHSITQEEFINGITDVDGVEGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGD 1656
            RH+ TQEE+INGITDVDGVEGD RR+PA             KPKESLVIRQRYGLDGKGD
Sbjct: 443  RHATTQEEYINGITDVDGVEGDNRRKPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGD 502

Query: 1657 RTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRQYV 1779
            RTLGEIAGNLNISREMVRKHEVKALMKLKHP RVDYLR+Y+
Sbjct: 503  RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 543


>XP_009368680.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Pyrus x
            bretschneideri]
          Length = 519

 Score =  619 bits (1597), Expect = 0.0
 Identities = 326/520 (62%), Positives = 401/520 (77%), Gaps = 8/520 (1%)
 Frame = +1

Query: 244  MGVVTVSSSATRTRLGLNSIFSTDTTPLKRMSVVSFKTDKPKNASLIVTQESLSLPRDNS 423
            MGVVTVS+SA RT LGL++  ++  +P ++  +V+FKTD+    +L+  Q  + LP +  
Sbjct: 1    MGVVTVSTSAARTPLGLSTKSTSQRSPFRKPWIVAFKTDESNKTALVAPQGKIPLPIETR 60

Query: 424  KGNKKKLRQAKKKPERVQATTIDEVAP-TTIELDYSEAAAKLESIYKRCHESSSCDTLVK 600
            K ++K++ +A+K  + V++T  D  AP TT+E+DY+EAAAKLE++YKR  E  + D  V+
Sbjct: 61   KKHQKRIGKARKLAKSVKSTATDVAAPCTTLEVDYNEAAAKLENLYKRSPEIEA-DVDVE 119

Query: 601  DCEA--KRGRDSRKRPVEA-----VKDITDSVVRSRKNKAKRLSLDKRISLRTXXXXXXX 759
            D +   +RGR  RK+  E+      K  +D VVRS+  KAKRL+LDKR++L+        
Sbjct: 120  DADGLLRRGRKRRKKTSESDHEKEEKRTSDIVVRSKTKKAKRLNLDKRVALKWNKDEKVV 179

Query: 760  XXXQKIRSREDEEVEKIHRLLREYANSSDIVSLDWKKMKIPPVLPSSEHVWLFKLMQPMK 939
               QK R  +  E EKI  L+REY+ S+D+VSLDWKKMKIPPVL SSEH WLFKLMQPMK
Sbjct: 180  SSVQK-RKDQKNETEKIEELVREYSASTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMK 238

Query: 940  EILEVKKNLKNDLGREPTDGESAQAFNVHLFELKKNMEVGQAARNKLIKHNLRLVLFVMN 1119
             + EV++ L+ DLG EPT+GE A+A N+ + ++KK+ EVG+AARNKLIKHNLRLVLFV+N
Sbjct: 239  GLHEVREQLQKDLGTEPTNGELAEATNMSVVQVKKHFEVGRAARNKLIKHNLRLVLFVIN 298

Query: 1120 KYFQDFVQGPKFQDLCQAGVKGLITAIDRFEPNRRLRLSTYGLFWIRHAIIRSMTVSSFT 1299
            KYFQDF  GPKFQDLCQAGV+GLITAIDRFEP R  RLSTYGLFWIRHAIIRSMTVSSFT
Sbjct: 299  KYFQDFANGPKFQDLCQAGVRGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTVSSFT 358

Query: 1300 KVPFGLESVRVEIQKAKLELLFELQRLPTEIEIIERVRISPERYNEVMNASKSAVSLNAR 1479
            +V FGLESVR EIQKAKLE++F L+R+PT+ EIIE+V ISPERY+EVM ASK   SL++R
Sbjct: 359  RVSFGLESVRAEIQKAKLEMMFSLKRMPTDEEIIEKVGISPERYHEVMRASKPVSSLHSR 418

Query: 1480 HSITQEEFINGITDVDGVEGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDR 1659
            H+ TQEE+INGITDVDGVEGD RR+PA             KPKESLVIRQRYGLDGKGDR
Sbjct: 419  HATTQEEYINGITDVDGVEGDNRRKPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGDR 478

Query: 1660 TLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRQYV 1779
            TLGEIAGNLNISREMVRKHEVKALMKLKHP RVDYLR+Y+
Sbjct: 479  TLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 518