BLASTX nr result

ID: Lithospermum23_contig00013317 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00013317
         (245 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006401948.1 hypothetical protein EUTSA_v10015055mg [Eutrema s...    70   9e-14
EEF27698.1 conserved hypothetical protein [Ricinus communis]           72   2e-13
YP_009242008.1 NADH dehydrogenase subunit 4 (mitochondrion) [Ory...    57   4e-09
YP_009242020.1 NADH dehydrogenase subunit 4 (mitochondrion) [Ory...    55   1e-08
CDY67690.1 BnaUnng02370D [Brassica napus]                              54   1e-06

>XP_006401948.1 hypothetical protein EUTSA_v10015055mg [Eutrema salsugineum]
           ESQ43401.1 hypothetical protein EUTSA_v10015055mg
           [Eutrema salsugineum]
          Length = 114

 Score = 70.1 bits (170), Expect = 9e-14
 Identities = 32/38 (84%), Positives = 34/38 (89%)
 Frame = +1

Query: 130 AGHSKKGGHTEQVQEIGPTPLS*KQGPLREVKPRTYGS 243
           +GHS KGGHTEQV+EIGP PL  KQGPLREVKPRTYGS
Sbjct: 52  SGHSTKGGHTEQVREIGPAPLYKKQGPLREVKPRTYGS 89


>EEF27698.1 conserved hypothetical protein [Ricinus communis]
          Length = 261

 Score = 72.0 bits (175), Expect = 2e-13
 Identities = 30/35 (85%), Positives = 32/35 (91%)
 Frame = -3

Query: 186 SGANFLYLLSVPPFLRVPRPVYWAVCWPTKHLPVL 82
           SGANF YLLSVPPF RVPRPV+WAVCWPTKHLP +
Sbjct: 99  SGANFSYLLSVPPFRRVPRPVHWAVCWPTKHLPAV 133


>YP_009242008.1 NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
            AMQ23370.1 NADH dehydrogenase subunit 4 (mitochondrion)
            [Oryza minuta]
          Length = 2992

 Score = 56.6 bits (135), Expect(2) = 4e-09
 Identities = 31/65 (47%), Positives = 41/65 (63%)
 Frame = +3

Query: 6    DRFENAAFA*HSGALKKRTSFIRSSQEPASAW*ANKQPSKPGGALEERGAH*ASTRNWPH 185
            +++E A     SG L+ R+   R  +  ASA    +QP +PGGAL+ERGAH AST+NWP 
Sbjct: 2259 EQYERAQQREQSG-LRARSPLGRRQELRASACLVGQQPCQPGGALDERGAHSASTKNWPR 2317

Query: 186  SAFLK 200
             AF K
Sbjct: 2318 GAFKK 2322



 Score = 31.2 bits (69), Expect(2) = 4e-09
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +2

Query: 197  KSKDHYGRSNQGP 235
            KSKDHYGRSN GP
Sbjct: 2323 KSKDHYGRSNHGP 2335


>YP_009242020.1 NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
            AMQ23374.1 NADH dehydrogenase subunit 4 (mitochondrion)
            [Oryza minuta]
          Length = 2992

 Score = 55.5 bits (132), Expect(2) = 1e-08
 Identities = 31/65 (47%), Positives = 40/65 (61%)
 Frame = +3

Query: 6    DRFENAAFA*HSGALKKRTSFIRSSQEPASAW*ANKQPSKPGGALEERGAH*ASTRNWPH 185
            ++ E A     SG L+ R+   R  +  ASA    +QP +PGGAL+ERGAH AST+NWP 
Sbjct: 2259 EQLERAQQREQSG-LRARSPLGRRQELRASACLVGQQPCQPGGALDERGAHSASTKNWPR 2317

Query: 186  SAFLK 200
             AF K
Sbjct: 2318 GAFKK 2322



 Score = 31.2 bits (69), Expect(2) = 1e-08
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +2

Query: 197  KSKDHYGRSNQGP 235
            KSKDHYGRSN GP
Sbjct: 2323 KSKDHYGRSNHGP 2335


>CDY67690.1 BnaUnng02370D [Brassica napus]
          Length = 354

 Score = 53.9 bits (128), Expect = 1e-06
 Identities = 25/31 (80%), Positives = 26/31 (83%)
 Frame = +1

Query: 133 GHSKKGGHTEQVQEIGPTPLS*KQGPLREVK 225
           GHS KGGHTEQV+EIGP PL  KQGPLRE K
Sbjct: 16  GHSTKGGHTEQVREIGPAPLYKKQGPLREGK 46


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