BLASTX nr result

ID: Lithospermum23_contig00012391 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00012391
         (414 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KDP23617.1 hypothetical protein JCGZ_23450 [Jatropha curcas]           58   2e-07
XP_012089200.1 PREDICTED: pre-rRNA-processing protein TSR2 homol...    58   2e-07
XP_006471770.1 PREDICTED: pre-rRNA-processing protein TSR2 homol...    54   4e-06
XP_006433074.1 hypothetical protein CICLE_v10002511mg [Citrus cl...    54   4e-06

>KDP23617.1 hypothetical protein JCGZ_23450 [Jatropha curcas]
          Length = 202

 Score = 57.8 bits (138), Expect = 2e-07
 Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
 Frame = +1

Query: 1   EECLEGNYNSILSLKEADPPRRVPTYIQQ-XXXXXXXXXXEIMSNDDLSAMVVEAPATGS 177
           EECLEGNYNSI +L++A P      +++Q           +  S DD S M+V+AP   S
Sbjct: 107 EECLEGNYNSIENLRQAGPVTGAHQHVRQAVDDDEDEDSDDDDSMDDKSNMMVDAPKLQS 166

Query: 178 RHSQLNV-IDSP-----PADDGWTVVGGSK 249
           + +QLN+ +D P       +DGWTVV   K
Sbjct: 167 KSNQLNMQVDEPNSQQAQGEDGWTVVSSRK 196


>XP_012089200.1 PREDICTED: pre-rRNA-processing protein TSR2 homolog [Jatropha
           curcas]
          Length = 203

 Score = 57.8 bits (138), Expect = 2e-07
 Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
 Frame = +1

Query: 1   EECLEGNYNSILSLKEADPPRRVPTYIQQ-XXXXXXXXXXEIMSNDDLSAMVVEAPATGS 177
           EECLEGNYNSI +L++A P      +++Q           +  S DD S M+V+AP   S
Sbjct: 107 EECLEGNYNSIENLRQAGPVTGAHQHVRQAVDDDEDEDSDDDDSMDDKSNMMVDAPKLQS 166

Query: 178 RHSQLNV-IDSP-----PADDGWTVVGGSK 249
           + +QLN+ +D P       +DGWTVV   K
Sbjct: 167 KSNQLNMQVDEPNSQQAQGEDGWTVVSSRK 196


>XP_006471770.1 PREDICTED: pre-rRNA-processing protein TSR2 homolog isoform X2
           [Citrus sinensis]
          Length = 191

 Score = 53.9 bits (128), Expect = 4e-06
 Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
 Frame = +1

Query: 1   EECLEGNYNSILSLKEADPPRRVPTYIQQXXXXXXXXXXEIMSNDDLSAMVVEAPATGSR 180
           EECLEGNY SI+ L+E  P     ++I+Q              +DD S M+V+   + S+
Sbjct: 97  EECLEGNYESIIKLRETRPQAVAGSHIRQSVNGDNDDDDSTDDDDDSSNMMVDTAESNSQ 156

Query: 181 HSQLNVIDS-------PPADDGWTVVGGSK 249
            + +NV  S         A+DGWTVV   +
Sbjct: 157 SNSVNVQASEVRPSVAAEAEDGWTVVSSKR 186


>XP_006433074.1 hypothetical protein CICLE_v10002511mg [Citrus clementina]
           XP_006471769.1 PREDICTED: pre-rRNA-processing protein
           TSR2 homolog isoform X1 [Citrus sinensis] ESR46314.1
           hypothetical protein CICLE_v10002511mg [Citrus
           clementina]
          Length = 205

 Score = 53.9 bits (128), Expect = 4e-06
 Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
 Frame = +1

Query: 1   EECLEGNYNSILSLKEADPPRRVPTYIQQXXXXXXXXXXEIMSNDDLSAMVVEAPATGSR 180
           EECLEGNY SI+ L+E  P     ++I+Q              +DD S M+V+   + S+
Sbjct: 111 EECLEGNYESIIKLRETRPQAVAGSHIRQSVNGDNDDDDSTDDDDDSSNMMVDTAESNSQ 170

Query: 181 HSQLNVIDS-------PPADDGWTVVGGSK 249
            + +NV  S         A+DGWTVV   +
Sbjct: 171 SNSVNVQASEVRPSVAAEAEDGWTVVSSKR 200


Top