BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00012360
         (1313 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 cop...   149   4e-35
OAE27396.1 hypothetical protein AXG93_2015s1240 [Marchantia poly...   128   2e-29
KYP62382.1 Retrovirus-related Pol polyprotein from transposon TN...   124   2e-28
OAE21436.1 hypothetical protein AXG93_3506s1100 [Marchantia poly...   119   4e-28
KYP69992.1 Retrovirus-related Pol polyprotein from transposon TN...   121   1e-27
KYP37021.1 Retrovirus-related Pol polyprotein from transposon TN...   122   2e-27
KYP36635.1 Retrovirus-related Pol polyprotein from transposon TN...   122   2e-27
XP_018467847.1 PREDICTED: uncharacterized protein LOC108839596 [...   121   6e-27
OAE30777.1 hypothetical protein AXG93_4876s1180 [Marchantia poly...   121   6e-27
KYP47565.1 Retrovirus-related Pol polyprotein from transposon TN...   116   7e-27
OAE29791.1 hypothetical protein AXG93_1513s1170 [Marchantia poly...   115   5e-26
OAE31581.1 hypothetical protein AXG93_3415s1410 [Marchantia poly...   119   2e-25
KYP64816.1 Retrovirus-related Pol polyprotein from transposon TN...   113   4e-25
KYP53379.1 Retrovirus-related Pol polyprotein from transposon TN...   112   2e-24
EOY09126.1 Uncharacterized protein TCM_024518 [Theobroma cacao]       111   3e-24
KYP38863.1 Retrovirus-related Pol polyprotein from transposon TN...   113   5e-24
XP_008351909.1 PREDICTED: transcription initiation factor TFIID ...   114   5e-24
EOY22705.1 Transducin/WD40 repeat-like superfamily protein [Theo...   113   4e-23
KHN13665.1 Retrovirus-related Pol polyprotein from transposon TN...   106   6e-22
KYP50610.1 Retrovirus-related Pol polyprotein from transposon TN...   101   3e-21

>ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 copia LTR rider
           [Solanum lycopersicum]
          Length = 1307

 Score =  149 bits (375), Expect = 4e-35
 Identities = 72/106 (67%), Positives = 87/106 (82%)
 Frame = -2

Query: 319 LEVDKFNGRNSFGLWQIKVRALLKREGIWSPLMKNPPTPVPENWDSLEEKAHSTLLLSLE 140
           +++DKF GRNSF LWQIK+RALLK++G W+PL K+    V      LEEKAHST++L L 
Sbjct: 6   VKIDKFTGRNSFSLWQIKMRALLKQQGFWAPLSKDKNAVVTPEMAILEEKAHSTIMLCLA 65

Query: 139 DEIITEVSEQETAAGLWAKLESLYMTRSLTNKLLLKQRLFSLRMQE 2
           D++ITEVS++ETAAGLW KLESLYMT+SLTNKLLLKQRLF LRM E
Sbjct: 66  DDVITEVSDEETAAGLWLKLESLYMTKSLTNKLLLKQRLFGLRMAE 111



 Score =  140 bits (353), Expect = 3e-32
 Identities = 65/70 (92%), Positives = 67/70 (95%)
 Frame = -2

Query: 1312 DSLSAICLTKDQVHHDRTKHIDVRYHFLRGEKRIKVNKVGTADNPADMFTKPVPQSKFQH 1133
            DSLSAICL KDQVHH+RTKHIDVRYHFLR EKRIKV KVGTADNPADMFTKPVPQSKFQH
Sbjct: 1238 DSLSAICLAKDQVHHERTKHIDVRYHFLRSEKRIKVKKVGTADNPADMFTKPVPQSKFQH 1297

Query: 1132 CLDLLNIQSC 1103
            CLDLLNI+SC
Sbjct: 1298 CLDLLNIRSC 1307


>OAE27396.1 hypothetical protein AXG93_2015s1240 [Marchantia polymorpha subsp.
            polymorpha]
          Length = 396

 Score =  128 bits (321), Expect = 2e-29
 Identities = 58/68 (85%), Positives = 64/68 (94%)
 Frame = -2

Query: 1312 DSLSAICLTKDQVHHDRTKHIDVRYHFLRGEKRIKVNKVGTADNPADMFTKPVPQSKFQH 1133
            DSLSAICLTKD VHH++TKHIDVRYHFLR EKRI+V KVGTAD+P DMFTKPVP+SKFQH
Sbjct: 327  DSLSAICLTKDHVHHEKTKHIDVRYHFLRNEKRIQVKKVGTADSPVDMFTKPVPESKFQH 386

Query: 1132 CLDLLNIQ 1109
            CLDLLNI+
Sbjct: 387  CLDLLNIR 394


>KYP62382.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 316

 Score =  124 bits (310), Expect = 2e-28
 Identities = 55/67 (82%), Positives = 61/67 (91%)
 Frame = -2

Query: 1312 DSLSAICLTKDQVHHDRTKHIDVRYHFLRGEKRIKVNKVGTADNPADMFTKPVPQSKFQH 1133
            DSLSAICLTKDQVHHDRTKHIDVRYHF+R E+RIKV+K+ T  NPADMFTKPVP+ KF H
Sbjct: 246  DSLSAICLTKDQVHHDRTKHIDVRYHFIRSERRIKVHKISTLHNPADMFTKPVPKRKFDH 305

Query: 1132 CLDLLNI 1112
            CLDLLN+
Sbjct: 306  CLDLLNV 312


>OAE21436.1 hypothetical protein AXG93_3506s1100 [Marchantia polymorpha subsp.
            polymorpha]
          Length = 178

 Score =  119 bits (297), Expect = 4e-28
 Identities = 55/69 (79%), Positives = 61/69 (88%)
 Frame = -2

Query: 1312 DSLSAICLTKDQVHHDRTKHIDVRYHFLRGEKRIKVNKVGTADNPADMFTKPVPQSKFQH 1133
            DSLSAICLTKDQVH++R KHIDVRYHFLR + RIKV KV T DNPADMFTKP P++KFQH
Sbjct: 109  DSLSAICLTKDQVHYERMKHIDVRYHFLRNKSRIKVKKVRTVDNPADMFTKPDPKNKFQH 168

Query: 1132 CLDLLNIQS 1106
            CL+LLNI S
Sbjct: 169  CLELLNIMS 177


>KYP69992.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 307

 Score =  121 bits (303), Expect = 1e-27
 Identities = 61/119 (51%), Positives = 83/119 (69%), Gaps = 13/119 (10%)
 Frame = -2

Query: 319 LEVDKFNGRNSFGLWQIKVRALLKREGIWSPL------------MKNPPTPVP-ENWDSL 179
           ++++KFNG+NSF LW+IK+ ALLK + +W PL            + N  T +  E+    
Sbjct: 5   IKIEKFNGKNSFNLWRIKMHALLKEQRVWGPLATTSVKKESKTELSNKSTSIKKEDLAEQ 64

Query: 178 EEKAHSTLLLSLEDEIITEVSEQETAAGLWAKLESLYMTRSLTNKLLLKQRLFSLRMQE 2
           EEKAHS +LLSL +E++ EV++QETA GLW KLE LYMT+S+ NKLLLK+RLF L M+E
Sbjct: 65  EEKAHSLILLSLSNEVLYEVADQETACGLWLKLEKLYMTKSICNKLLLKRRLFGLHMKE 123


>KYP37021.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 352

 Score =  122 bits (305), Expect = 2e-27
 Identities = 62/119 (52%), Positives = 84/119 (70%), Gaps = 13/119 (10%)
 Frame = -2

Query: 319 LEVDKFNGRNSFGLWQIKVRALLKREGIWSPL----MKNPPTPVPENWDSL--------- 179
           + ++KFNG+NSF LW+IK+RALLK + +W+PL    +K      P+   S          
Sbjct: 7   IRIEKFNGKNSFNLWRIKMRALLKEQRVWAPLATTSVKQEVLSEPKEKASASKIEELAEQ 66

Query: 178 EEKAHSTLLLSLEDEIITEVSEQETAAGLWAKLESLYMTRSLTNKLLLKQRLFSLRMQE 2
           EEKAHS +LLSL DE++ EV+++ETA+GLW KLE LYMT+S+ NKLLLK+RLF L M+E
Sbjct: 67  EEKAHSLILLSLSDEVLYEVADEETASGLWCKLEKLYMTKSICNKLLLKRRLFGLHMKE 125


>KYP36635.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 364

 Score =  122 bits (305), Expect = 2e-27
 Identities = 62/119 (52%), Positives = 84/119 (70%), Gaps = 13/119 (10%)
 Frame = -2

Query: 319 LEVDKFNGRNSFGLWQIKVRALLKREGIWSPL----MKNPPTPVPENWDSL--------- 179
           + ++KFNG+NSF LW+IK+RALLK + +W+PL    +K      P+   S          
Sbjct: 7   IRIEKFNGKNSFNLWRIKMRALLKEQRVWAPLATTSVKQEVLSEPKEKASASKIEELAEQ 66

Query: 178 EEKAHSTLLLSLEDEIITEVSEQETAAGLWAKLESLYMTRSLTNKLLLKQRLFSLRMQE 2
           EEKAHS +LLSL DE++ EV+++ETA+GLW KLE LYMT+S+ NKLLLK+RLF L M+E
Sbjct: 67  EEKAHSLILLSLSDEVLYEVADEETASGLWCKLEKLYMTKSICNKLLLKRRLFGLHMKE 125


>XP_018467847.1 PREDICTED: uncharacterized protein LOC108839596 [Raphanus sativus]
          Length = 408

 Score =  121 bits (304), Expect = 6e-27
 Identities = 58/70 (82%), Positives = 61/70 (87%)
 Frame = -2

Query: 1312 DSLSAICLTKDQVHHDRTKHIDVRYHFLRGEKRIKVNKVGTADNPADMFTKPVPQSKFQH 1133
            DSLSAI L KDQVHH+RTKHIDVRY FLR EKRI+V KVGT DNPADMFTK VP SKF+H
Sbjct: 339  DSLSAIYLAKDQVHHERTKHIDVRYRFLREEKRIEVKKVGTPDNPADMFTKVVPHSKFKH 398

Query: 1132 CLDLLNIQSC 1103
            CLDLLNI SC
Sbjct: 399  CLDLLNISSC 408


>OAE30777.1 hypothetical protein AXG93_4876s1180 [Marchantia polymorpha subsp.
            polymorpha]
          Length = 394

 Score =  121 bits (303), Expect = 6e-27
 Identities = 57/69 (82%), Positives = 62/69 (89%)
 Frame = -2

Query: 1312 DSLSAICLTKDQVHHDRTKHIDVRYHFLRGEKRIKVNKVGTADNPADMFTKPVPQSKFQH 1133
            DSLSAI LTKDQVHH+RTKHIDVRYHFLR E RIKV KVGT DN ADMFTKPVP++KF+H
Sbjct: 325  DSLSAIGLTKDQVHHERTKHIDVRYHFLRNESRIKVKKVGTTDNCADMFTKPVPKNKFEH 384

Query: 1132 CLDLLNIQS 1106
            CL+LLNI S
Sbjct: 385  CLELLNIMS 393


>KYP47565.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 207

 Score =  116 bits (291), Expect = 7e-27
 Identities = 52/67 (77%), Positives = 59/67 (88%)
 Frame = -2

Query: 1312 DSLSAICLTKDQVHHDRTKHIDVRYHFLRGEKRIKVNKVGTADNPADMFTKPVPQSKFQH 1133
            DSLSAICL KDQVHH+RTKHIDVRYHF++ EKRIKV K+ +  NPAD FTKPVP+SKF H
Sbjct: 137  DSLSAICLAKDQVHHERTKHIDVRYHFIQTEKRIKVQKIDSKHNPADTFTKPVPKSKFMH 196

Query: 1132 CLDLLNI 1112
            CLDLLN+
Sbjct: 197  CLDLLNV 203


>OAE29791.1 hypothetical protein AXG93_1513s1170 [Marchantia polymorpha subsp.
            polymorpha]
          Length = 266

 Score =  115 bits (289), Expect = 5e-26
 Identities = 54/69 (78%), Positives = 60/69 (86%)
 Frame = -2

Query: 1312 DSLSAICLTKDQVHHDRTKHIDVRYHFLRGEKRIKVNKVGTADNPADMFTKPVPQSKFQH 1133
            DSLSAICLTK Q HH+RTKHIDV+YHFLR + RIKV KV TADN ADMFTKPVP++KFQ 
Sbjct: 198  DSLSAICLTKYQAHHERTKHIDVKYHFLRNDSRIKVKKVKTADNTADMFTKPVPKNKFQQ 257

Query: 1132 CLDLLNIQS 1106
            CL+LLNI S
Sbjct: 258  CLELLNIMS 266


>OAE31581.1 hypothetical protein AXG93_3415s1410 [Marchantia polymorpha subsp.
            polymorpha]
          Length = 627

 Score =  119 bits (298), Expect = 2e-25
 Identities = 54/68 (79%), Positives = 61/68 (89%)
 Frame = -2

Query: 1312 DSLSAICLTKDQVHHDRTKHIDVRYHFLRGEKRIKVNKVGTADNPADMFTKPVPQSKFQH 1133
            DSLSAICLTKDQ HH++TKHIDV+YHFL  EKRI+V KVG ADNPA MFT PVP+SKF+H
Sbjct: 558  DSLSAICLTKDQFHHEKTKHIDVKYHFLSNEKRIQVKKVGIADNPAYMFTNPVPESKFEH 617

Query: 1132 CLDLLNIQ 1109
            CLDLLNI+
Sbjct: 618  CLDLLNIR 625


>KYP64816.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 252

 Score =  113 bits (282), Expect = 4e-25
 Identities = 55/108 (50%), Positives = 79/108 (73%), Gaps = 3/108 (2%)
 Frame = -2

Query: 316 EVDKFNGRNSFGLWQIKVRALLKREGIWSPLM---KNPPTPVPENWDSLEEKAHSTLLLS 146
           EV+KF G+N FGLW++K+RALL  +G+   L    K     V E    ++EKAHS ++LS
Sbjct: 7   EVEKFTGQNDFGLWRLKMRALLVHQGLVDALAGEAKAENATVDEERKKMQEKAHSAIILS 66

Query: 145 LEDEIITEVSEQETAAGLWAKLESLYMTRSLTNKLLLKQRLFSLRMQE 2
           L D+++ +VS+++TAAG+W+KLESLYMT+SL N+L LKQ L+S +M E
Sbjct: 67  LGDKVLRQVSKEKTAAGIWSKLESLYMTKSLVNRLYLKQSLYSFKMNE 114


>KYP53379.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 307

 Score =  112 bits (280), Expect = 2e-24
 Identities = 55/108 (50%), Positives = 78/108 (72%), Gaps = 3/108 (2%)
 Frame = -2

Query: 316 EVDKFNGRNSFGLWQIKVRALLKREGIWSPLM---KNPPTPVPENWDSLEEKAHSTLLLS 146
           EV+KF G+N FGLW++K+RALL  +G+   L    K     V E    ++EKAHS ++LS
Sbjct: 7   EVEKFTGQNDFGLWRLKMRALLVHQGLVDALAGEAKAENATVDEERKKMQEKAHSAIILS 66

Query: 145 LEDEIITEVSEQETAAGLWAKLESLYMTRSLTNKLLLKQRLFSLRMQE 2
           L D+++ +VS+++TAAG+W+KLESLYMT+SL N+L LKQ L+S  M E
Sbjct: 67  LGDKVLRQVSKEKTAAGIWSKLESLYMTKSLVNRLYLKQSLYSFNMNE 114


>EOY09126.1 Uncharacterized protein TCM_024518 [Theobroma cacao]
          Length = 277

 Score =  111 bits (277), Expect = 3e-24
 Identities = 53/108 (49%), Positives = 78/108 (72%), Gaps = 3/108 (2%)
 Frame = -2

Query: 316 EVDKFNGRNSFGLWQIKVRALLKREGIWSPLMKNPPTPV---PENWDSLEEKAHSTLLLS 146
           E++KFNGRN F LW++K+ ALL ++G+   L      P        D L EKAHS +LL+
Sbjct: 9   EIEKFNGRNDFSLWRVKMCALLVQQGLLKALKGKEHLPSNLSDSEKDDLMEKAHSAILLT 68

Query: 145 LEDEIITEVSEQETAAGLWAKLESLYMTRSLTNKLLLKQRLFSLRMQE 2
           L DE++ EV+++E+AA +W KLES+Y+T+SLTN+L +KQRL++L+M E
Sbjct: 69  LSDEVLREVTDEESAAAMWFKLESIYITKSLTNRLYMKQRLYTLKMSE 116


>KYP38863.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 390

 Score =  113 bits (282), Expect = 5e-24
 Identities = 52/67 (77%), Positives = 58/67 (86%)
 Frame = -2

Query: 1312 DSLSAICLTKDQVHHDRTKHIDVRYHFLRGEKRIKVNKVGTADNPADMFTKPVPQSKFQH 1133
            DSLSAICL KDQVHH+RTKHIDVRYHF+  E+RIKV K+ T  NPADMFTK VP+SKF H
Sbjct: 320  DSLSAICLAKDQVHHERTKHIDVRYHFIISERRIKVQKIDTLHNPADMFTKFVPKSKFFH 379

Query: 1132 CLDLLNI 1112
            CLDLLN+
Sbjct: 380  CLDLLNV 386


>XP_008351909.1 PREDICTED: transcription initiation factor TFIID subunit 2-like
           [Malus domestica]
          Length = 454

 Score =  114 bits (284), Expect = 5e-24
 Identities = 54/110 (49%), Positives = 81/110 (73%), Gaps = 5/110 (4%)
 Frame = -2

Query: 316 EVDKFNGRNSFGLWQIKVRALLKREGIWSPLMKNPPTPVPENWDSLEE-----KAHSTLL 152
           +++KFNGRN F LW++K+RA+L ++G+   L       +P++W + E+     +AHS ++
Sbjct: 6   DIEKFNGRNDFSLWRVKMRAVLVQQGLLKALQG--VEALPQDWSAEEKEDALNRAHSAIM 63

Query: 151 LSLEDEIITEVSEQETAAGLWAKLESLYMTRSLTNKLLLKQRLFSLRMQE 2
           LSL DE++ E+  + TAAGLW KLES+YMT+SLTN+L LKQRL++LRM E
Sbjct: 64  LSLSDEVLREMENETTAAGLWLKLESIYMTKSLTNRLYLKQRLYTLRMTE 113


>EOY22705.1 Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
          Length = 1029

 Score =  113 bits (282), Expect = 4e-23
 Identities = 54/108 (50%), Positives = 79/108 (73%), Gaps = 3/108 (2%)
 Frame = -2

Query: 316 EVDKFNGRNSFGLWQIKVRALLKREGIWSPLMKNPPTPV---PENWDSLEEKAHSTLLLS 146
           E++KFNGRN F LW++K+RALL ++G+   L      P        D L +KAHS +LL+
Sbjct: 131 EIEKFNGRNDFSLWRVKMRALLVQQGLLKALKGKEHLPSNLSDGEKDDLMKKAHSVILLA 190

Query: 145 LEDEIITEVSEQETAAGLWAKLESLYMTRSLTNKLLLKQRLFSLRMQE 2
           L DE++ EV+++E+AA +W KLES+YMT+SLTN+L +KQRL++L+M E
Sbjct: 191 LSDEVLREVTDEESAAAVWFKLESIYMTKSLTNRLYMKQRLYTLKMSE 238


>KHN13665.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 337

 Score =  106 bits (264), Expect = 6e-22
 Identities = 56/108 (51%), Positives = 77/108 (71%), Gaps = 3/108 (2%)
 Frame = -2

Query: 316 EVDKFNGRNSFGLWQIKVRALLKREGIWSPLM---KNPPTPVPENWDSLEEKAHSTLLLS 146
           +V+KF G N F L +IK++ALL  +G+   L    K P T   +    L  KAHST++LS
Sbjct: 6   DVEKFTGENDFSLRRIKMQALLVHQGLDDALQGASKLPSTLSDKEKKDLLSKAHSTIILS 65

Query: 145 LEDEIITEVSEQETAAGLWAKLESLYMTRSLTNKLLLKQRLFSLRMQE 2
           L DE++ EV+E+++AAG+W KLESLYMT+SLTNKL LK+RL  L+M+E
Sbjct: 66  LGDEVLREVAEEKSAAGIWLKLESLYMTKSLTNKLYLKKRLHQLKMEE 113


>KYP50610.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 210

 Score =  101 bits (251), Expect = 3e-21
 Identities = 51/106 (48%), Positives = 71/106 (66%), Gaps = 13/106 (12%)
 Frame = -2

Query: 319 LEVDKFNGRNSFGLWQIKVRALLKREGIWSPLM-----KNPPTPVPENWDSL-------- 179
           ++++KFNG+NSF LW+IK+RALLK + +W PL      K   T + +   S+        
Sbjct: 5   IKIEKFNGKNSFNLWRIKMRALLKEQRVWGPLATTSVKKERKTELSDKSTSIKKEDHAEQ 64

Query: 178 EEKAHSTLLLSLEDEIITEVSEQETAAGLWAKLESLYMTRSLTNKL 41
           EEKAHS +LLSL DE++ EV++QETA GLW KLE LYMT+ +  K+
Sbjct: 65  EEKAHSLILLSLSDEVLYEVADQETACGLWLKLEKLYMTKDIDVKI 110