BLASTX nr result
ID: Lithospermum23_contig00011964
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00011964
(721 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017216463.1 PREDICTED: RNA polymerase II transcription factor... 92 6e-21
XP_016568145.1 PREDICTED: RNA polymerase II transcription factor... 92 9e-21
XP_012439566.1 PREDICTED: general transcription factor IIH subun... 92 1e-20
XP_015083768.1 PREDICTED: uncharacterized protein LOC107027108 [... 91 2e-20
XP_006477302.1 PREDICTED: general transcription factor IIH subun... 91 3e-20
CDP09870.1 unnamed protein product [Coffea canephora] 90 5e-20
XP_016449213.1 PREDICTED: RNA polymerase II transcription factor... 90 7e-20
XP_009800833.1 PREDICTED: uncharacterized protein LOC104246667 [... 90 7e-20
XP_006363721.1 PREDICTED: uncharacterized protein LOC102604697 [... 89 9e-20
XP_002266482.1 PREDICTED: RNA polymerase II transcription factor... 89 1e-19
XP_015584007.1 PREDICTED: general transcription factor IIH subun... 89 2e-19
XP_010277378.1 PREDICTED: RNA polymerase II transcription factor... 89 2e-19
KZV54434.1 general transcription factor IIH subunit 5-like [Dorc... 88 3e-19
XP_017241130.1 PREDICTED: RNA polymerase II transcription factor... 88 4e-19
XP_015869009.1 PREDICTED: RNA polymerase II transcription factor... 88 4e-19
XP_010055551.1 PREDICTED: RNA polymerase II transcription factor... 87 5e-19
XP_006368720.1 hypothetical protein POPTR_0001s08090g [Populus t... 87 5e-19
XP_011081099.1 PREDICTED: uncharacterized protein LOC105164192 [... 87 5e-19
XP_009589305.1 PREDICTED: RNA polymerase II transcription factor... 87 7e-19
XP_010277379.1 PREDICTED: RNA polymerase II transcription factor... 86 1e-18
>XP_017216463.1 PREDICTED: RNA polymerase II transcription factor B subunit 5
[Daucus carota subsp. sativus]
Length = 70
Score = 92.4 bits (228), Expect = 6e-21
Identities = 41/55 (74%), Positives = 49/55 (89%)
Frame = +3
Query: 555 KGLFVSCDGPMAQFIINLNATLPHNQKFIIHVLDSTHLFIKPDMAGTIRTAISEF 719
KGL++SCD PMAQFIIN+NA LPH+QKFI+HVLD THLF++ DMAG+IR ISEF
Sbjct: 6 KGLYISCDIPMAQFIINMNAALPHSQKFILHVLDDTHLFVRSDMAGSIRDKISEF 60
>XP_016568145.1 PREDICTED: RNA polymerase II transcription factor B subunit 5
[Capsicum annuum] XP_016568148.1 PREDICTED: RNA
polymerase II transcription factor B subunit 5 [Capsicum
annuum]
Length = 70
Score = 92.0 bits (227), Expect = 9e-21
Identities = 42/55 (76%), Positives = 51/55 (92%)
Frame = +3
Query: 555 KGLFVSCDGPMAQFIINLNATLPHNQKFIIHVLDSTHLFIKPDMAGTIRTAISEF 719
KGL+VSCD PMAQFIIN+NA+LP +QKFIIHVLD+THLF++ DMAG IR+AI+EF
Sbjct: 6 KGLYVSCDIPMAQFIINMNASLPQSQKFIIHVLDNTHLFVRSDMAGMIRSAIAEF 60
>XP_012439566.1 PREDICTED: general transcription factor IIH subunit 5 [Gossypium
raimondii] XP_012439567.1 PREDICTED: general
transcription factor IIH subunit 5 [Gossypium raimondii]
XP_012439568.1 PREDICTED: general transcription factor
IIH subunit 5 [Gossypium raimondii] XP_016724586.1
PREDICTED: RNA polymerase II transcription factor B
subunit 5-like [Gossypium hirsutum] XP_016724587.1
PREDICTED: RNA polymerase II transcription factor B
subunit 5-like [Gossypium hirsutum] XP_016736969.1
PREDICTED: RNA polymerase II transcription factor B
subunit 5-like [Gossypium hirsutum] XP_016736970.1
PREDICTED: RNA polymerase II transcription factor B
subunit 5-like [Gossypium hirsutum] XP_017635340.1
PREDICTED: RNA polymerase II transcription factor B
subunit 5 [Gossypium arboreum] XP_017635341.1 PREDICTED:
RNA polymerase II transcription factor B subunit 5
[Gossypium arboreum] XP_017635342.1 PREDICTED: RNA
polymerase II transcription factor B subunit 5
[Gossypium arboreum] KHG20853.1 General transcription
factor IIH subunit 5 [Gossypium arboreum] KJB51911.1
hypothetical protein B456_008G240500 [Gossypium
raimondii] KJB51912.1 hypothetical protein
B456_008G240500 [Gossypium raimondii]
Length = 70
Score = 91.7 bits (226), Expect = 1e-20
Identities = 43/55 (78%), Positives = 49/55 (89%)
Frame = +3
Query: 555 KGLFVSCDGPMAQFIINLNATLPHNQKFIIHVLDSTHLFIKPDMAGTIRTAISEF 719
KGLFVSCD PMAQFI+NLNA+LP KFIIHVLDSTH F++PD+AG IR+AISEF
Sbjct: 6 KGLFVSCDIPMAQFIVNLNASLPAAHKFIIHVLDSTHFFVQPDVAGMIRSAISEF 60
>XP_015083768.1 PREDICTED: uncharacterized protein LOC107027108 [Solanum pennellii]
Length = 70
Score = 90.9 bits (224), Expect = 2e-20
Identities = 41/55 (74%), Positives = 51/55 (92%)
Frame = +3
Query: 555 KGLFVSCDGPMAQFIINLNATLPHNQKFIIHVLDSTHLFIKPDMAGTIRTAISEF 719
KGL++SCD PMAQFIIN+NA+LP +QKFIIHVLD+THLF++ DMAG IR+AIS+F
Sbjct: 6 KGLYLSCDIPMAQFIINMNASLPQSQKFIIHVLDNTHLFVRSDMAGMIRSAISDF 60
>XP_006477302.1 PREDICTED: general transcription factor IIH subunit 5 [Citrus
sinensis] XP_006477303.1 PREDICTED: general
transcription factor IIH subunit 5 [Citrus sinensis]
XP_006477304.1 PREDICTED: general transcription factor
IIH subunit 5 [Citrus sinensis] KDO63733.1 hypothetical
protein CISIN_1g0351902mg [Citrus sinensis] KDO63734.1
hypothetical protein CISIN_1g0351902mg [Citrus sinensis]
KDO63735.1 hypothetical protein CISIN_1g0351902mg
[Citrus sinensis]
Length = 70
Score = 90.5 bits (223), Expect = 3e-20
Identities = 40/55 (72%), Positives = 51/55 (92%)
Frame = +3
Query: 555 KGLFVSCDGPMAQFIINLNATLPHNQKFIIHVLDSTHLFIKPDMAGTIRTAISEF 719
KGLF+SCD PMAQFIIN+NA++P +QKFIIH+LDSTHLF++P+MA IR+AI+EF
Sbjct: 6 KGLFISCDIPMAQFIINMNASMPQSQKFIIHILDSTHLFVQPNMAEMIRSAIAEF 60
>CDP09870.1 unnamed protein product [Coffea canephora]
Length = 70
Score = 90.1 bits (222), Expect = 5e-20
Identities = 41/55 (74%), Positives = 49/55 (89%)
Frame = +3
Query: 555 KGLFVSCDGPMAQFIINLNATLPHNQKFIIHVLDSTHLFIKPDMAGTIRTAISEF 719
KGL +SCD PMAQFIIN+NA LP +QKFIIHVLDSTHLF++ D+AG IR+AI+EF
Sbjct: 6 KGLMISCDVPMAQFIINMNAALPQSQKFIIHVLDSTHLFVRSDVAGMIRSAIAEF 60
>XP_016449213.1 PREDICTED: RNA polymerase II transcription factor B subunit 5-like
[Nicotiana tabacum]
Length = 70
Score = 89.7 bits (221), Expect = 7e-20
Identities = 40/55 (72%), Positives = 50/55 (90%)
Frame = +3
Query: 555 KGLFVSCDGPMAQFIINLNATLPHNQKFIIHVLDSTHLFIKPDMAGTIRTAISEF 719
KGLF+SCD PMAQFIIN+NA LP +QKFI+HVLD+THLF++ D+AG IR+AI+EF
Sbjct: 6 KGLFISCDVPMAQFIINVNAALPQSQKFILHVLDNTHLFVQSDVAGMIRSAIAEF 60
>XP_009800833.1 PREDICTED: uncharacterized protein LOC104246667 [Nicotiana
sylvestris]
Length = 70
Score = 89.7 bits (221), Expect = 7e-20
Identities = 40/55 (72%), Positives = 50/55 (90%)
Frame = +3
Query: 555 KGLFVSCDGPMAQFIINLNATLPHNQKFIIHVLDSTHLFIKPDMAGTIRTAISEF 719
KGLF+SCD PMAQFIIN+NA LP +QKFI+HVLD+THLF++ D+AG IR+AI+EF
Sbjct: 6 KGLFISCDVPMAQFIINVNAALPQSQKFILHVLDNTHLFVQSDVAGMIRSAIAEF 60
>XP_006363721.1 PREDICTED: uncharacterized protein LOC102604697 [Solanum tuberosum]
Length = 70
Score = 89.4 bits (220), Expect = 9e-20
Identities = 40/55 (72%), Positives = 50/55 (90%)
Frame = +3
Query: 555 KGLFVSCDGPMAQFIINLNATLPHNQKFIIHVLDSTHLFIKPDMAGTIRTAISEF 719
KGL++SCD PM QFIIN+NA+LP +QKFIIHVLD+THLF++ DMAG IR+AIS+F
Sbjct: 6 KGLYLSCDIPMTQFIINMNASLPQSQKFIIHVLDNTHLFVRSDMAGMIRSAISDF 60
>XP_002266482.1 PREDICTED: RNA polymerase II transcription factor B subunit 5
[Vitis vinifera] XP_010661766.1 PREDICTED: RNA
polymerase II transcription factor B subunit 5 [Vitis
vinifera] XP_019081172.1 PREDICTED: RNA polymerase II
transcription factor B subunit 5 [Vitis vinifera]
CBI34818.3 unnamed protein product, partial [Vitis
vinifera]
Length = 70
Score = 89.0 bits (219), Expect = 1e-19
Identities = 41/55 (74%), Positives = 50/55 (90%)
Frame = +3
Query: 555 KGLFVSCDGPMAQFIINLNATLPHNQKFIIHVLDSTHLFIKPDMAGTIRTAISEF 719
KGLF+SCD PMAQFIIN+NA++P +QKFIIHVLDSTHLF++P +A IR+AISEF
Sbjct: 6 KGLFISCDIPMAQFIINMNASMPASQKFIIHVLDSTHLFVQPHVAEMIRSAISEF 60
>XP_015584007.1 PREDICTED: general transcription factor IIH subunit 5 [Ricinus
communis]
Length = 70
Score = 88.6 bits (218), Expect = 2e-19
Identities = 41/55 (74%), Positives = 49/55 (89%)
Frame = +3
Query: 555 KGLFVSCDGPMAQFIINLNATLPHNQKFIIHVLDSTHLFIKPDMAGTIRTAISEF 719
KGLF+SCD PMAQFIIN+NATLP +QKFIIHVLD THLF++P +A IR+AI+EF
Sbjct: 6 KGLFISCDIPMAQFIINMNATLPTSQKFIIHVLDGTHLFVQPHVAEMIRSAIAEF 60
>XP_010277378.1 PREDICTED: RNA polymerase II transcription factor B subunit 5
isoform X1 [Nelumbo nucifera]
Length = 101
Score = 89.4 bits (220), Expect = 2e-19
Identities = 44/63 (69%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Frame = +3
Query: 534 WNIMVQQ-KGLFVSCDGPMAQFIINLNATLPHNQKFIIHVLDSTHLFIKPDMAGTIRTAI 710
W IMV KG+F+SCD PMAQFIINLNAT P + KFIIHVLDSTHLF++P++ IR+AI
Sbjct: 29 WIIMVNATKGIFISCDIPMAQFIINLNATQPASSKFIIHVLDSTHLFVQPNVTEMIRSAI 88
Query: 711 SEF 719
SEF
Sbjct: 89 SEF 91
>KZV54434.1 general transcription factor IIH subunit 5-like [Dorcoceras
hygrometricum]
Length = 70
Score = 88.2 bits (217), Expect = 3e-19
Identities = 39/55 (70%), Positives = 50/55 (90%)
Frame = +3
Query: 555 KGLFVSCDGPMAQFIINLNATLPHNQKFIIHVLDSTHLFIKPDMAGTIRTAISEF 719
KGL+++CD PMAQFIIN+NA+LP +QKFIIHVLD+THLF++ DMAG IR+AI+ F
Sbjct: 6 KGLYITCDIPMAQFIINMNASLPQSQKFIIHVLDNTHLFVRSDMAGMIRSAIATF 60
>XP_017241130.1 PREDICTED: RNA polymerase II transcription factor B subunit 5-like
[Daucus carota subsp. sativus]
Length = 70
Score = 87.8 bits (216), Expect = 4e-19
Identities = 40/55 (72%), Positives = 47/55 (85%)
Frame = +3
Query: 555 KGLFVSCDGPMAQFIINLNATLPHNQKFIIHVLDSTHLFIKPDMAGTIRTAISEF 719
KGL++SCD PMAQFIIN+NATLP QKFI+HVLD T LF++ DMAG+IR ISEF
Sbjct: 6 KGLYISCDIPMAQFIINMNATLPQTQKFILHVLDDTRLFVRSDMAGSIRDKISEF 60
>XP_015869009.1 PREDICTED: RNA polymerase II transcription factor B subunit 5
[Ziziphus jujuba] XP_015869010.1 PREDICTED: RNA
polymerase II transcription factor B subunit 5 [Ziziphus
jujuba]
Length = 70
Score = 87.8 bits (216), Expect = 4e-19
Identities = 39/55 (70%), Positives = 49/55 (89%)
Frame = +3
Query: 555 KGLFVSCDGPMAQFIINLNATLPHNQKFIIHVLDSTHLFIKPDMAGTIRTAISEF 719
KGLF+SCD PMAQFIINLN+TLP +QKFIIH+LDSTH+F++P A IR+A+S+F
Sbjct: 6 KGLFISCDVPMAQFIINLNSTLPASQKFIIHILDSTHMFVQPHAAEMIRSAVSDF 60
>XP_010055551.1 PREDICTED: RNA polymerase II transcription factor B subunit 5
[Eucalyptus grandis] XP_010055552.1 PREDICTED: RNA
polymerase II transcription factor B subunit 5
[Eucalyptus grandis] XP_010055553.1 PREDICTED: RNA
polymerase II transcription factor B subunit 5
[Eucalyptus grandis] XP_018729880.1 PREDICTED: RNA
polymerase II transcription factor B subunit 5
[Eucalyptus grandis] KCW72036.1 hypothetical protein
EUGRSUZ_E00483 [Eucalyptus grandis]
Length = 70
Score = 87.4 bits (215), Expect = 5e-19
Identities = 40/55 (72%), Positives = 48/55 (87%)
Frame = +3
Query: 555 KGLFVSCDGPMAQFIINLNATLPHNQKFIIHVLDSTHLFIKPDMAGTIRTAISEF 719
KGLF+SCD PMAQFIIN NA+LP +QKFIIHVLD+THLF++P MA +R AI+EF
Sbjct: 6 KGLFISCDIPMAQFIINFNASLPASQKFIIHVLDNTHLFVQPHMADMLRNAIAEF 60
>XP_006368720.1 hypothetical protein POPTR_0001s08090g [Populus trichocarpa]
XP_006368721.1 hypothetical protein POPTR_0001s08090g
[Populus trichocarpa] XP_006368722.1 hypothetical
protein POPTR_0001s08090g [Populus trichocarpa]
ERP65289.1 hypothetical protein POPTR_0001s08090g
[Populus trichocarpa] ERP65290.1 hypothetical protein
POPTR_0001s08090g [Populus trichocarpa] ERP65291.1
hypothetical protein POPTR_0001s08090g [Populus
trichocarpa]
Length = 70
Score = 87.4 bits (215), Expect = 5e-19
Identities = 39/55 (70%), Positives = 50/55 (90%)
Frame = +3
Query: 555 KGLFVSCDGPMAQFIINLNATLPHNQKFIIHVLDSTHLFIKPDMAGTIRTAISEF 719
KGLF+SCD PMAQFIINLNA+LP +QKFIIH+LDSTH+F++P ++ IR+AIS+F
Sbjct: 6 KGLFISCDIPMAQFIINLNASLPASQKFIIHILDSTHMFVQPHVSDMIRSAISDF 60
>XP_011081099.1 PREDICTED: uncharacterized protein LOC105164192 [Sesamum indicum]
Length = 71
Score = 87.4 bits (215), Expect = 5e-19
Identities = 38/55 (69%), Positives = 50/55 (90%)
Frame = +3
Query: 555 KGLFVSCDGPMAQFIINLNATLPHNQKFIIHVLDSTHLFIKPDMAGTIRTAISEF 719
KGL++SCD PMAQFIIN+NA+LP +QKFIIHVLD+TH+F++ D+AG IR+AI+ F
Sbjct: 7 KGLYISCDVPMAQFIINMNASLPQSQKFIIHVLDNTHIFVRSDVAGMIRSAIATF 61
>XP_009589305.1 PREDICTED: RNA polymerase II transcription factor B subunit 5-like
[Nicotiana tomentosiformis] XP_009589306.1 PREDICTED:
RNA polymerase II transcription factor B subunit 5-like
[Nicotiana tomentosiformis] XP_009784135.1 PREDICTED:
general transcription factor IIH subunit 5-like
[Nicotiana sylvestris] XP_009784136.1 PREDICTED: general
transcription factor IIH subunit 5-like [Nicotiana
sylvestris] XP_009784137.1 PREDICTED: general
transcription factor IIH subunit 5-like [Nicotiana
sylvestris] XP_009784139.1 PREDICTED: general
transcription factor IIH subunit 5-like [Nicotiana
sylvestris] XP_009784140.1 PREDICTED: general
transcription factor IIH subunit 5-like [Nicotiana
sylvestris] XP_016501747.1 PREDICTED: RNA polymerase II
transcription factor B subunit 5-like [Nicotiana
tabacum] XP_016501748.1 PREDICTED: RNA polymerase II
transcription factor B subunit 5-like [Nicotiana
tabacum] XP_016433107.1 PREDICTED: RNA polymerase II
transcription factor B subunit 5-like [Nicotiana
tabacum] XP_016433108.1 PREDICTED: RNA polymerase II
transcription factor B subunit 5-like [Nicotiana
tabacum] XP_016433109.1 PREDICTED: RNA polymerase II
transcription factor B subunit 5-like [Nicotiana
tabacum] XP_016433110.1 PREDICTED: RNA polymerase II
transcription factor B subunit 5-like [Nicotiana
tabacum] XP_018623064.1 PREDICTED: RNA polymerase II
transcription factor B subunit 5-like [Nicotiana
tomentosiformis] XP_018623065.1 PREDICTED: RNA
polymerase II transcription factor B subunit 5-like
[Nicotiana tomentosiformis] XP_019247740.1 PREDICTED:
RNA polymerase II transcription factor B subunit 5-like
[Nicotiana attenuata] XP_019247741.1 PREDICTED: RNA
polymerase II transcription factor B subunit 5-like
[Nicotiana attenuata] XP_019247742.1 PREDICTED: RNA
polymerase II transcription factor B subunit 5-like
[Nicotiana attenuata] OIT02429.1 rna polymerase ii
transcription factor b subunit 5 [Nicotiana attenuata]
Length = 70
Score = 87.0 bits (214), Expect = 7e-19
Identities = 39/55 (70%), Positives = 49/55 (89%)
Frame = +3
Query: 555 KGLFVSCDGPMAQFIINLNATLPHNQKFIIHVLDSTHLFIKPDMAGTIRTAISEF 719
KGL++SCD PMAQFIIN+NA LP +QKFII VLD+THLF++ D+AG IR+AI+EF
Sbjct: 6 KGLYISCDVPMAQFIINMNAALPQSQKFIIQVLDNTHLFVRSDVAGMIRSAIAEF 60
>XP_010277379.1 PREDICTED: RNA polymerase II transcription factor B subunit 5
isoform X2 [Nelumbo nucifera]
Length = 70
Score = 86.3 bits (212), Expect = 1e-18
Identities = 40/55 (72%), Positives = 48/55 (87%)
Frame = +3
Query: 555 KGLFVSCDGPMAQFIINLNATLPHNQKFIIHVLDSTHLFIKPDMAGTIRTAISEF 719
KG+F+SCD PMAQFIINLNAT P + KFIIHVLDSTHLF++P++ IR+AISEF
Sbjct: 6 KGIFISCDIPMAQFIINLNATQPASSKFIIHVLDSTHLFVQPNVTEMIRSAISEF 60