BLASTX nr result
ID: Lithospermum23_contig00011956
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00011956
(3960 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CDP02357.1 unnamed protein product [Coffea canephora] 1447 0.0
NP_001289520.1 DNA-directed RNA polymerase 2, chloroplastic/mito... 1434 0.0
BAB78464.1 T7 bacteriophage-type single subunit RNA polymerase [... 1431 0.0
XP_016445194.1 PREDICTED: DNA-directed RNA polymerase 2, chlorop... 1430 0.0
XP_009619460.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro... 1430 0.0
NP_001311818.1 DNA-directed RNA polymerase 2B, chloroplastic/mit... 1428 0.0
XP_019234815.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro... 1423 0.0
XP_015063457.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro... 1410 0.0
XP_004232127.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA ... 1409 0.0
XP_006338320.1 PREDICTED: DNA-directed RNA polymerase 2, chlorop... 1405 0.0
XP_015063458.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro... 1405 0.0
XP_011085577.1 PREDICTED: DNA-directed RNA polymerase 2, chlorop... 1402 0.0
XP_019185406.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro... 1399 0.0
XP_010660553.1 PREDICTED: DNA-directed RNA polymerase 2, chlorop... 1397 0.0
XP_017975629.1 PREDICTED: DNA-directed RNA polymerase 2, chlorop... 1392 0.0
XP_018816698.1 PREDICTED: DNA-directed RNA polymerase 2, chlorop... 1390 0.0
XP_017975628.1 PREDICTED: DNA-directed RNA polymerase 2, chlorop... 1387 0.0
XP_012835044.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro... 1382 0.0
XP_007214918.1 hypothetical protein PRUPE_ppa000719mg [Prunus pe... 1375 0.0
KZV25000.1 DNA-directed RNA polymerase 2, chloroplastic/mitochon... 1371 0.0
>CDP02357.1 unnamed protein product [Coffea canephora]
Length = 1040
Score = 1447 bits (3745), Expect = 0.0
Identities = 730/1039 (70%), Positives = 837/1039 (80%), Gaps = 3/1039 (0%)
Frame = -1
Query: 3675 HPLDKPLKNLSKPPQNSPIMWRNIAKQVSSRTLSSKLFCLNNKINYLSSFYSSKRFSGLS 3496
+P+ KP L KPP+ S +MW+NIAK VSSRTL ++ F + L YS F G S
Sbjct: 20 NPVYKPRIFLLKPPEISTVMWKNIAKLVSSRTLRTQEFGSIFNPHSLPRTYS---FLGFS 76
Query: 3495 QDLIFIHSFKCRPQDF--CSYVLDSEYPKKGLRNFCQFSSNDEFFSRPKLYNLKNDIKNY 3322
QD IF FK DF CS + + ++G R +FS+ DEF +RP L +N I
Sbjct: 77 QDSIFPEKFKFSTLDFNPCS---GNGFLEQGFRKVGEFSTRDEFLARPSLNFARNQISIN 133
Query: 3321 GLCPKRYASVAEAVEVSNTDVDEVGVLHXXXXXXXXXXXXXXELLKELRSQERRQSSAKR 3142
GL K YAS+AEA+ VS+TDV+E ELL E++ ++RRQ S +
Sbjct: 134 GLSQKSYASLAEAIAVSSTDVEE--------DTSVVAADEVHELLSEMKKEDRRQMSFRW 185
Query: 3141 RRQFRIACGMSHKKYRTLKRRQVKIETEAWEQAANEYTELLQDMCRHKLAPNLPYMKSLF 2962
R+ R GM KKY LKRRQVKIETEAWEQAANEY ELL DMC HKLAPNLPYMKSLF
Sbjct: 186 RKHHRAVYGMGSKKYHALKRRQVKIETEAWEQAANEYKELLNDMCEHKLAPNLPYMKSLF 245
Query: 2961 LGWFEPLRDRIVQEQDSFMQGETKTTCAMYFNLLPAEKMAVITMHKLTSLLMSGTDHHYG 2782
LGWFEPL +I +EQ+ ++K A YF+ LPA+ M+VITMHKL LLM+G +H G
Sbjct: 246 LGWFEPLCSKIAEEQELCRLRKSKAAYAKYFHQLPADMMSVITMHKLMGLLMTGGEH--G 303
Query: 2781 NTRFVNAACLIGDAIEQEVRIHNLLEQTXXXXXXKADGIILEEDQSSEDAQDKEKLKRTV 2602
+ R V AACLIGDAIEQE+RIH LE+T + + +E D ++ Q++EKL+RTV
Sbjct: 304 SARVVPAACLIGDAIEQEIRIHKFLEKTKKKKVN--EEMKMEGDMTTSVIQEQEKLRRTV 361
Query: 2601 TNLMKKQKLRAVNQILKRRDDSKPWGAEAKAKVGSRLIELLLQTAYIQQ-ADQTHDGSPD 2425
TNLMKKQKL V QI+K +DDSKPW E KAKVGSRLIELLLQTAYIQ ADQ D PD
Sbjct: 362 TNLMKKQKLHVVQQIVKGQDDSKPWSTEVKAKVGSRLIELLLQTAYIQSPADQLADCPPD 421
Query: 2424 IRPAFVHTVKTLIKESKFASRRYGVIQCDPQILKGLEKTARHMVIPYMPMLIPPFKWTGY 2245
IRPAF+HT +T+ +K SRRYG+IQCDP +LKGLE+TARHMVIPYMPML+PP KWTGY
Sbjct: 422 IRPAFIHTFRTVTNNTKSPSRRYGIIQCDPLVLKGLERTARHMVIPYMPMLVPPVKWTGY 481
Query: 2244 EEGAHIFLPSYVMRTHGSRQQRDVIRRTPRKQLEMVFEALDTLGSTKWRINKRVLNIIDR 2065
++G H+FLPSYVMRTHG+RQQR+ ++R P QL V+EALDTLG+TKWR+NKRVL+++DR
Sbjct: 482 DKGGHLFLPSYVMRTHGARQQREAVKRAPINQLRPVYEALDTLGNTKWRVNKRVLSVVDR 541
Query: 2064 IWASGGRLADLVDREDIPLPEEPDTDDENQLKKWRWKVNSVKKENSERYSQRCDIELKLA 1885
IWASGGRL +LVDR DI LPEEP+T+DE L+KW+WKV S+KKENSER+SQRCDIELKLA
Sbjct: 542 IWASGGRLGNLVDRNDIALPEEPETEDEAILRKWKWKVKSIKKENSERHSQRCDIELKLA 601
Query: 1884 VARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDVCRGILEFAEGHRLGTSGLRWLKI 1705
VAR+MKDE GF+YPHNLDFRGRAYPMHPHLNHLGSDVCRG+LEFAEG LG SGL WLKI
Sbjct: 602 VARRMKDEGGFFYPHNLDFRGRAYPMHPHLNHLGSDVCRGMLEFAEGRPLGKSGLHWLKI 661
Query: 1704 HLANLYANGVDKLSSEGRIAFTESHLDEIFDSTDRPLEGQRWWLNAEDPFQCLAVCFNLT 1525
HLANL+ANGVDKLS E RIAFTE+HL++IFDS DRPLEG+RWWLNAEDPFQCLAVC NL+
Sbjct: 662 HLANLFANGVDKLSHEARIAFTENHLEDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLS 721
Query: 1524 EALRSPSPETTISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIATR 1345
EALRS SPETTISHIP+HQDGSCNGLQHYAALGRDKLGA+AVNLVAGEKPADVYSGIA R
Sbjct: 722 EALRSQSPETTISHIPVHQDGSCNGLQHYAALGRDKLGASAVNLVAGEKPADVYSGIAAR 781
Query: 1344 VLEIMKRDAQKDPAVFPDALRARVLINHVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE 1165
VL+IMKRDAQKDPAVFPDALRARVL+N VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE
Sbjct: 782 VLDIMKRDAQKDPAVFPDALRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE 841
Query: 1164 RDAIADESELFGASCYAAKITLTALGEMFEAARDIMNWLGECAKIIASENEPVRWTTPLG 985
R AIAD++ELFGA+CYAAK+TLTAL EMFEAAR IM+WLGECAK+IASEN+ VRW TPLG
Sbjct: 842 RGAIADDAELFGAACYAAKVTLTALEEMFEAARSIMSWLGECAKVIASENQTVRWMTPLG 901
Query: 984 LPVVQPYRQIARSLVRTSLQILTLTRETDKVMVKRQRTAFPPNFVHSLDGCHMMMTALAC 805
LPVVQPYRQ+ R L++TSLQ+LTL RET+KVMVKRQRTAFPPNFVHSLDG HMMMTA+AC
Sbjct: 902 LPVVQPYRQLGRHLIKTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVAC 961
Query: 804 KKAGMNFAGVHDSYWTHACDVDELNRILREKFVELYETPVLENLLEGFQKXXXXXXXXXX 625
+KAG+NFAGVHDSYWTHACDVDE+NRILREKFVELYETP+LENLLE FQK
Sbjct: 962 RKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEDFQKTFPSLSFPAL 1021
Query: 624 PERGDFDLNDVLTSTYFFN 568
PERGDFDL DVL STYFFN
Sbjct: 1022 PERGDFDLKDVLDSTYFFN 1040
>NP_001289520.1 DNA-directed RNA polymerase 2, chloroplastic/mitochondrial [Nicotiana
sylvestris] Q8VWF8.2 RecName: Full=DNA-directed RNA
polymerase 2, chloroplastic/mitochondrial; AltName:
Full=NsRpoT-B; AltName: Full=T7 bacteriophage-type single
subunit RNA polymerase 2; Flags: Precursor CAC82575.2
phage-type RNA polymerase [Nicotiana sylvestris]
Length = 1020
Score = 1434 bits (3713), Expect = 0.0
Identities = 729/1055 (69%), Positives = 840/1055 (79%), Gaps = 8/1055 (0%)
Frame = -1
Query: 3708 INFSLKIEPFVHPLDKPLKNLSKPPQNSPIMWRNIAKQVSSRTLSSKLFCLNNKINYLSS 3529
I+ ++K+ F DKP P NSPIMWRNI KQ+SSRT LF N+
Sbjct: 8 ISLTIKLNQFT---DKPTGLDINPYHNSPIMWRNIIKQLSSRTPQKLLFSSKNRT----- 59
Query: 3528 FYSSKRFSGLSQDLIFIHSFKCRP--QDFCSYVLDSEYPKKGLRNFCQFSSNDEFFSRPK 3355
YS F G QD IF + K R CS ++ G +N ++ DEF SRP
Sbjct: 60 -YS---FLGFGQDSIFKDNTKFRSLIPISCSNIV------MGFQNLGEYLPGDEFLSRPL 109
Query: 3354 LYNLKNDIKNYGLCPKRYASVAEAVEVSNTDVDE-VGVLHXXXXXXXXXXXXXXELLKEL 3178
+ KN + N C K YASVAEAV VS+TD +E V V+ LL EL
Sbjct: 110 I---KNQVNNNFCCRKSYASVAEAVAVSSTDAEEDVSVVDEVHE-----------LLTEL 155
Query: 3177 RSQERRQSSAKRRRQFRIACGMSHKKYRTLKRRQVKIETEAWEQAANEYTELLQDMCRHK 2998
+ +E++Q + +RR+Q + GM H+KY+TLKRRQVK+ETEAWEQAA EY ELL DMC K
Sbjct: 156 KKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQK 215
Query: 2997 LAPNLPYMKSLFLGWFEPLRDRIVQEQDSFMQGETKTTCAMYFNLLPAEKMAVITMHKLT 2818
LAPNLPY+KSLFLGWFEPLRD+I +EQ+ QG++K A YF LPA+ MAVITMHKL
Sbjct: 216 LAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYFYQLPADMMAVITMHKLM 275
Query: 2817 SLLMSGTDHHYGNTRFVNAACLIGDAIEQEVRIHNLLEQTXXXXXXKADGIILEEDQSSE 2638
LLM+G DH G R V AA +IGDAIEQEVRIHN LE+T E+D+ E
Sbjct: 276 GLLMTGGDH--GTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKA--------EKDKQKE 325
Query: 2637 DA----QDKEKLKRTVTNLMKKQKLRAVNQILKRRDDSKPWGAEAKAKVGSRLIELLLQT 2470
D Q++EKL++ VTNLMKKQKLRAV QI++R+DDSKPWG +A+AKVGSRLI+LLLQT
Sbjct: 326 DGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDARAKVGSRLIDLLLQT 385
Query: 2469 AYIQQ-ADQTHDGSPDIRPAFVHTVKTLIKESKFASRRYGVIQCDPQILKGLEKTARHMV 2293
AYIQ A+Q PDIRPAFVH+V+T+ KE+K ASRRYG+IQCD + KGLE+TARHMV
Sbjct: 386 AYIQPPANQLAVDPPDIRPAFVHSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHMV 445
Query: 2292 IPYMPMLIPPFKWTGYEEGAHIFLPSYVMRTHGSRQQRDVIRRTPRKQLEMVFEALDTLG 2113
IPYMPML+PP KWTGY++G H++LPSYVMRTHG+RQQR+ ++R R QL+ VFEALDTLG
Sbjct: 446 IPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLG 505
Query: 2112 STKWRINKRVLNIIDRIWASGGRLADLVDREDIPLPEEPDTDDENQLKKWRWKVNSVKKE 1933
+TKWRINKRVL+++DRIWA GGRLADLVDR+D PLPEEPDT+DE KWRWKV SVKKE
Sbjct: 506 NTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKE 565
Query: 1932 NSERYSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDVCRGILEF 1753
N ER+SQRCDIELKLAVARKMKDEE F+YPHN+DFRGRAYPMHPHLNHLGSD+CRG+LEF
Sbjct: 566 NRERHSQRCDIELKLAVARKMKDEESFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEF 625
Query: 1752 AEGHRLGTSGLRWLKIHLANLYANGVDKLSSEGRIAFTESHLDEIFDSTDRPLEGQRWWL 1573
AEG LG SGLRWLKIHLANL+A GV+KLS EGRI FTE+H+D+IFDS+D+PLEG+RWWL
Sbjct: 626 AEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIGFTENHMDDIFDSSDKPLEGRRWWL 685
Query: 1572 NAEDPFQCLAVCFNLTEALRSPSPETTISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNL 1393
NAEDPFQCLAVC NL+EA+RS SPET++SHIP+HQDGSCNGLQHYAALGRDKLGAAAVNL
Sbjct: 686 NAEDPFQCLAVCINLSEAVRSSSPETSVSHIPVHQDGSCNGLQHYAALGRDKLGAAAVNL 745
Query: 1392 VAGEKPADVYSGIATRVLEIMKRDAQKDPAVFPDALRARVLINHVDRKLVKQTVMTSVYG 1213
VAGEKPADVYSGIA RVL+IMKRDAQ+DPA FPDA+RARVL+N VDRKLVKQTVMTSVYG
Sbjct: 746 VAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYG 805
Query: 1212 VTYIGARDQIKRRLKERDAIADESELFGASCYAAKITLTALGEMFEAARDIMNWLGECAK 1033
VTYIGARDQIKRRLKER AIAD+SELFGA+CYAAK+TLTALGEMFEAAR IM WLGECAK
Sbjct: 806 VTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAK 865
Query: 1032 IIASENEPVRWTTPLGLPVVQPYRQIARSLVRTSLQILTLTRETDKVMVKRQRTAFPPNF 853
IIASENEPVRWTTPLGLPVVQPYR+I R L++TSLQILTL RET+KVMVKRQRTAFPPNF
Sbjct: 866 IIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQRETEKVMVKRQRTAFPPNF 925
Query: 852 VHSLDGCHMMMTALACKKAGMNFAGVHDSYWTHACDVDELNRILREKFVELYETPVLENL 673
+HSLDG HMMMTA+AC++AG+NFAGVHDSYWTHACDVD+LNRILREKFVELYE P+LE L
Sbjct: 926 IHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYEAPILEKL 985
Query: 672 LEGFQKXXXXXXXXXXPERGDFDLNDVLTSTYFFN 568
LE FQ PERGDFD+ DVL S YFFN
Sbjct: 986 LESFQTSYPTLLFPPLPERGDFDMRDVLESPYFFN 1020
>BAB78464.1 T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris] BAB78465.1 T7 bacteriophage-type single
subunit RNA polymerase [Nicotiana sylvestris]
Length = 1020
Score = 1431 bits (3704), Expect = 0.0
Identities = 727/1055 (68%), Positives = 839/1055 (79%), Gaps = 8/1055 (0%)
Frame = -1
Query: 3708 INFSLKIEPFVHPLDKPLKNLSKPPQNSPIMWRNIAKQVSSRTLSSKLFCLNNKINYLSS 3529
I+ ++K+ F DKP P NSPIMWRNI KQ+SSRT LF N+
Sbjct: 8 ISLTIKLNQFT---DKPTGLDINPYHNSPIMWRNIIKQLSSRTPQKLLFSSKNRT----- 59
Query: 3528 FYSSKRFSGLSQDLIFIHSFKCRP--QDFCSYVLDSEYPKKGLRNFCQFSSNDEFFSRPK 3355
YS F G QD IF + K R CS ++ G +N ++ DEF SRP
Sbjct: 60 -YS---FLGFGQDSIFKDNTKFRSLIPISCSNIV------MGFQNLGEYLPGDEFLSRPL 109
Query: 3354 LYNLKNDIKNYGLCPKRYASVAEAVEVSNTDVDE-VGVLHXXXXXXXXXXXXXXELLKEL 3178
+ KN + N C K YASVAEAV VS+TD +E V V+ LL EL
Sbjct: 110 I---KNQVNNNFCCRKSYASVAEAVAVSSTDAEEDVSVVDEVHE-----------LLTEL 155
Query: 3177 RSQERRQSSAKRRRQFRIACGMSHKKYRTLKRRQVKIETEAWEQAANEYTELLQDMCRHK 2998
+ +E++Q + +RR+Q + GM H+KY+TLKRRQVK+ETEAWEQAA EY ELL DMC K
Sbjct: 156 KKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQK 215
Query: 2997 LAPNLPYMKSLFLGWFEPLRDRIVQEQDSFMQGETKTTCAMYFNLLPAEKMAVITMHKLT 2818
LAPNLPY+KSLFLGWFEPLRD+I +EQ+ QG++K A YF LPA+ MAVITMHKL
Sbjct: 216 LAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYFYQLPADMMAVITMHKLM 275
Query: 2817 SLLMSGTDHHYGNTRFVNAACLIGDAIEQEVRIHNLLEQTXXXXXXKADGIILEEDQSSE 2638
LLM+G DH G R V AA +IGDAIEQEVRIHN LE+T E+D+ E
Sbjct: 276 GLLMTGGDH--GTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKA--------EKDKQKE 325
Query: 2637 DA----QDKEKLKRTVTNLMKKQKLRAVNQILKRRDDSKPWGAEAKAKVGSRLIELLLQT 2470
D Q++EKL++ VTNLMKKQKLRAV QI++R+DDSKPWG +A+AKVGSRLI+LLLQT
Sbjct: 326 DGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDARAKVGSRLIDLLLQT 385
Query: 2469 AYIQQ-ADQTHDGSPDIRPAFVHTVKTLIKESKFASRRYGVIQCDPQILKGLEKTARHMV 2293
AYIQ A+Q PDI PAFVH+V+T+ KE+K ASRRYG+IQCD + KGLE+TARHMV
Sbjct: 386 AYIQPPANQLAVDPPDIPPAFVHSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHMV 445
Query: 2292 IPYMPMLIPPFKWTGYEEGAHIFLPSYVMRTHGSRQQRDVIRRTPRKQLEMVFEALDTLG 2113
IPYMPML+PP KWTGY++G H++LPSYVMRTHG+RQQR+ ++R R QL+ VFEALDTLG
Sbjct: 446 IPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLG 505
Query: 2112 STKWRINKRVLNIIDRIWASGGRLADLVDREDIPLPEEPDTDDENQLKKWRWKVNSVKKE 1933
+TKWRINKRVL+++DRIWA GGRLADLVDR+D PLPEEPDT+DE L KWRWKV SVKKE
Sbjct: 506 NTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALLPKWRWKVKSVKKE 565
Query: 1932 NSERYSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDVCRGILEF 1753
N ER+SQRCDIELKLAVARKMKDEE F+YPHN+DFRGRAYPMHPHLNHLGSD+CRG+LEF
Sbjct: 566 NRERHSQRCDIELKLAVARKMKDEESFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEF 625
Query: 1752 AEGHRLGTSGLRWLKIHLANLYANGVDKLSSEGRIAFTESHLDEIFDSTDRPLEGQRWWL 1573
AEG LG SGLRWLKIHLANL+A GV+KLS EGRI FTE+H+D+IFDS+D+PLEG+RWWL
Sbjct: 626 AEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIGFTENHMDDIFDSSDKPLEGRRWWL 685
Query: 1572 NAEDPFQCLAVCFNLTEALRSPSPETTISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNL 1393
NAEDPFQCLAVC NL+EA+RS SPET++SHIP+HQDGSCNGLQHYAALGRDKLGAAAVNL
Sbjct: 686 NAEDPFQCLAVCINLSEAVRSSSPETSVSHIPVHQDGSCNGLQHYAALGRDKLGAAAVNL 745
Query: 1392 VAGEKPADVYSGIATRVLEIMKRDAQKDPAVFPDALRARVLINHVDRKLVKQTVMTSVYG 1213
VAGEKPA+ YSGIA RVL+IMKRDAQ+DPA FPDA+RARVL+N VDRKLVKQTVMTSVYG
Sbjct: 746 VAGEKPAEAYSGIAARVLDIMKRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYG 805
Query: 1212 VTYIGARDQIKRRLKERDAIADESELFGASCYAAKITLTALGEMFEAARDIMNWLGECAK 1033
VTYIGARDQIKRRLKER AIAD+SELFGA+CYAAK+TLTALGEMFEAAR IM WLGECAK
Sbjct: 806 VTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAK 865
Query: 1032 IIASENEPVRWTTPLGLPVVQPYRQIARSLVRTSLQILTLTRETDKVMVKRQRTAFPPNF 853
IIASENEPVRWTTPLGLPVVQPYR+I R L++TSLQILTL RET+KVMVKRQRTAFPPNF
Sbjct: 866 IIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQRETEKVMVKRQRTAFPPNF 925
Query: 852 VHSLDGCHMMMTALACKKAGMNFAGVHDSYWTHACDVDELNRILREKFVELYETPVLENL 673
+HSLDG HMMMTA+AC++AG+NFAGVHDSYWTHACDVD+LNRILREKFVELYE P+LE L
Sbjct: 926 IHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYEAPILEKL 985
Query: 672 LEGFQKXXXXXXXXXXPERGDFDLNDVLTSTYFFN 568
LE FQ PERGDFD+ DVL S YFFN
Sbjct: 986 LESFQTSYPTLLFPPLPERGDFDMRDVLESPYFFN 1020
>XP_016445194.1 PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
[Nicotiana tabacum]
Length = 1020
Score = 1430 bits (3701), Expect = 0.0
Identities = 727/1055 (68%), Positives = 838/1055 (79%), Gaps = 8/1055 (0%)
Frame = -1
Query: 3708 INFSLKIEPFVHPLDKPLKNLSKPPQNSPIMWRNIAKQVSSRTLSSKLFCLNNKINYLSS 3529
I+ ++K+ F DKP P NSPIMWRNI KQ+SSRT LF N+
Sbjct: 8 ISLTIKLNQFT---DKPTGLDINPYHNSPIMWRNIIKQLSSRTPQKLLFSSKNRT----- 59
Query: 3528 FYSSKRFSGLSQDLIFIHSFKCRP--QDFCSYVLDSEYPKKGLRNFCQFSSNDEFFSRPK 3355
YS F G QD +F + K R CS ++ G +N ++ DEF SRP
Sbjct: 60 -YS---FLGFGQDSVFKDNTKFRSLIPISCSNIV------MGFQNLGEYLPGDEFLSRPL 109
Query: 3354 LYNLKNDIKNYGLCPKRYASVAEAVEVSNTDVDE-VGVLHXXXXXXXXXXXXXXELLKEL 3178
+ KN + N K YASVAEAV VS+TD +E V V+ LL EL
Sbjct: 110 I---KNQVNNNFCWRKSYASVAEAVAVSSTDAEEDVSVVDEVHE-----------LLTEL 155
Query: 3177 RSQERRQSSAKRRRQFRIACGMSHKKYRTLKRRQVKIETEAWEQAANEYTELLQDMCRHK 2998
+ +E++Q + +RR+Q + GM H+KY+TLKRRQVK+ETEAWEQAA EY ELL DMC K
Sbjct: 156 KKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQK 215
Query: 2997 LAPNLPYMKSLFLGWFEPLRDRIVQEQDSFMQGETKTTCAMYFNLLPAEKMAVITMHKLT 2818
LAPNLPY+KSLFLGWFEPLRD+I +EQ+ QG++K A YF LPA+ MAVITMHKL
Sbjct: 216 LAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYFYQLPADMMAVITMHKLM 275
Query: 2817 SLLMSGTDHHYGNTRFVNAACLIGDAIEQEVRIHNLLEQTXXXXXXKADGIILEEDQSSE 2638
LLM+G DH G R V AA +IGDAIEQEVRIHN LE+T E+D+ E
Sbjct: 276 GLLMTGGDH--GTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKA--------EKDKQKE 325
Query: 2637 DA----QDKEKLKRTVTNLMKKQKLRAVNQILKRRDDSKPWGAEAKAKVGSRLIELLLQT 2470
D Q++EKL++ VTNLMKKQKLRAV QI++R+DDSKPWG +A+AKVGSRLI+LLLQT
Sbjct: 326 DGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDARAKVGSRLIDLLLQT 385
Query: 2469 AYIQQ-ADQTHDGSPDIRPAFVHTVKTLIKESKFASRRYGVIQCDPQILKGLEKTARHMV 2293
AYIQ A+Q PDIRPAFVH+V+T+ KE+K ASRRYG+IQCD + KGLE+TARHMV
Sbjct: 386 AYIQPPANQLAVDPPDIRPAFVHSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHMV 445
Query: 2292 IPYMPMLIPPFKWTGYEEGAHIFLPSYVMRTHGSRQQRDVIRRTPRKQLEMVFEALDTLG 2113
IPYMPML+PP KWTGY++G H++LPSYVMRTHG+RQQR+ ++R R QL+ VFEALDTLG
Sbjct: 446 IPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLG 505
Query: 2112 STKWRINKRVLNIIDRIWASGGRLADLVDREDIPLPEEPDTDDENQLKKWRWKVNSVKKE 1933
+TKWRINKRVL+++DRIWA GGRLADLVDR+D PLPEEPDT+DE KWRWKV SVKKE
Sbjct: 506 NTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKE 565
Query: 1932 NSERYSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDVCRGILEF 1753
N ER+SQRCDIELKLAVARKMKDEE F+YPHN+DFRGRAYPMHPHLNHLGSD+CRG+LEF
Sbjct: 566 NRERHSQRCDIELKLAVARKMKDEESFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEF 625
Query: 1752 AEGHRLGTSGLRWLKIHLANLYANGVDKLSSEGRIAFTESHLDEIFDSTDRPLEGQRWWL 1573
AEG LG SGLRWLKIHLANL+A GV+KLS EGRI FTE+H+D+IFDS D+PLEG+RWWL
Sbjct: 626 AEGRPLGVSGLRWLKIHLANLFAGGVEKLSLEGRIGFTENHMDDIFDSADKPLEGRRWWL 685
Query: 1572 NAEDPFQCLAVCFNLTEALRSPSPETTISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNL 1393
NAEDPFQCLAVC NL+EA+RS SPET++SHIP+HQDGSCNGLQHYAALGRDKLGAAAVNL
Sbjct: 686 NAEDPFQCLAVCINLSEAVRSSSPETSVSHIPVHQDGSCNGLQHYAALGRDKLGAAAVNL 745
Query: 1392 VAGEKPADVYSGIATRVLEIMKRDAQKDPAVFPDALRARVLINHVDRKLVKQTVMTSVYG 1213
VAGEKPADVYSGIA RVL+IMKRDAQ+DPA FPDA+RARVL+N VDRKLVKQTVMTSVYG
Sbjct: 746 VAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYG 805
Query: 1212 VTYIGARDQIKRRLKERDAIADESELFGASCYAAKITLTALGEMFEAARDIMNWLGECAK 1033
VTYIGARDQIKRRLKER AIAD+SELFGA+CYAAK+TLTALGEMFEAAR IM WLGECAK
Sbjct: 806 VTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAK 865
Query: 1032 IIASENEPVRWTTPLGLPVVQPYRQIARSLVRTSLQILTLTRETDKVMVKRQRTAFPPNF 853
IIASENEPVRWTTPLGLPVVQPYR+I R L++TSLQILTL RET+KVMVKRQRTAFPPNF
Sbjct: 866 IIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQRETEKVMVKRQRTAFPPNF 925
Query: 852 VHSLDGCHMMMTALACKKAGMNFAGVHDSYWTHACDVDELNRILREKFVELYETPVLENL 673
+HSLDG HMMMTA+AC++AG+NFAGVHDSYWTHACDVD+LNRILREKFVELYE P+LE L
Sbjct: 926 IHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYEAPILEKL 985
Query: 672 LEGFQKXXXXXXXXXXPERGDFDLNDVLTSTYFFN 568
LE FQ PERGDFD+ DVL S YFFN
Sbjct: 986 LESFQTSYPTLLFPPLPERGDFDMRDVLESPYFFN 1020
>XP_009619460.1 PREDICTED: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial [Nicotiana tomentosiformis]
Length = 1021
Score = 1430 bits (3701), Expect = 0.0
Identities = 731/1055 (69%), Positives = 838/1055 (79%), Gaps = 8/1055 (0%)
Frame = -1
Query: 3708 INFSLKIEPFVHPLDKPLKNLSKPPQNSPIMWRNIAKQVSSRTLSSKLFCLNNKINYLSS 3529
I+ ++K+ F DKP NSPIMWRNI KQ+SSRT LF N+
Sbjct: 8 ISLTIKLNQFT---DKPTGLDINRYHNSPIMWRNIIKQLSSRTPQKLLFSSKNRT----- 59
Query: 3528 FYSSKRFSGLSQDLIFIHSFKCRP--QDFCSYVLDSEYPKKGLRNFCQFSSNDEFFSRPK 3355
YS F G QD +F + K R CS ++ G +N ++ DEF SRP
Sbjct: 60 -YS---FLGFGQDSVFKDNTKFRSLIPISCSNIV------MGFQNLGEYLPGDEFLSRPL 109
Query: 3354 LYNLKNDIKNYGLCPKRYASVAEAVEVSNTDVDE-VGVLHXXXXXXXXXXXXXXELLKEL 3178
L + N N C K YASVAEAV VS+TD +E V V+ LL EL
Sbjct: 110 LKSQVNS--NDFCCRKSYASVAEAVAVSSTDAEEDVSVVDEVQE-----------LLTEL 156
Query: 3177 RSQERRQSSAKRRRQFRIACGMSHKKYRTLKRRQVKIETEAWEQAANEYTELLQDMCRHK 2998
+ +E++Q + +RR+Q + GM H+KY+TLKRRQVK+ETEAWEQAA EY ELL DMC K
Sbjct: 157 KKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQK 216
Query: 2997 LAPNLPYMKSLFLGWFEPLRDRIVQEQDSFMQGETKTTCAMYFNLLPAEKMAVITMHKLT 2818
LAPNLPY+KSLFLGWFEPLRD+I +EQ+ QG++K A Y LPA+ MAVITMHKL
Sbjct: 217 LAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYLYQLPADMMAVITMHKLM 276
Query: 2817 SLLMSGTDHHYGNTRFVNAACLIGDAIEQEVRIHNLLEQTXXXXXXKADGIILEEDQSSE 2638
LLM+G DH G R V AA +IGDAIEQEVRIHN LE+T E+D+ E
Sbjct: 277 GLLMTGGDH--GTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKA--------EKDKQKE 326
Query: 2637 DA----QDKEKLKRTVTNLMKKQKLRAVNQILKRRDDSKPWGAEAKAKVGSRLIELLLQT 2470
D Q++EKL++ VTNLMKKQKLRAV QI++R+DDSKPWG +AKAKVGSRLIELLLQT
Sbjct: 327 DGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDAKAKVGSRLIELLLQT 386
Query: 2469 AYIQQ-ADQTHDGSPDIRPAFVHTVKTLIKESKFASRRYGVIQCDPQILKGLEKTARHMV 2293
AYIQ A+Q PDIRPAF+H+V+T+ KE+K ASRRYG+IQCD + KGLE+TARHMV
Sbjct: 387 AYIQPPANQLAVDPPDIRPAFLHSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHMV 446
Query: 2292 IPYMPMLIPPFKWTGYEEGAHIFLPSYVMRTHGSRQQRDVIRRTPRKQLEMVFEALDTLG 2113
IPYMPML+PP KWTGY++G H++LPSYVMRTHG+RQQR+ ++R R QL+ VFEALDTLG
Sbjct: 447 IPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLG 506
Query: 2112 STKWRINKRVLNIIDRIWASGGRLADLVDREDIPLPEEPDTDDENQLKKWRWKVNSVKKE 1933
STKWRINKRVL+++DRIWA GGRLADLVDR+D PLPEEPDT+DE KWRWKV SVKKE
Sbjct: 507 STKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKE 566
Query: 1932 NSERYSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDVCRGILEF 1753
N ER+SQRCDIELKLAVARKMKDEEGF+YPHN+DFRGRAYPMHPHLNHLGSD+CRG+LEF
Sbjct: 567 NRERHSQRCDIELKLAVARKMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEF 626
Query: 1752 AEGHRLGTSGLRWLKIHLANLYANGVDKLSSEGRIAFTESHLDEIFDSTDRPLEGQRWWL 1573
AEG LG SGLRWLKIHLANL+A GV+KLS EGRIAFTE+H+D+IFDS D+PLEG+RWWL
Sbjct: 627 AEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIAFTENHMDDIFDSADKPLEGRRWWL 686
Query: 1572 NAEDPFQCLAVCFNLTEALRSPSPETTISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNL 1393
NAEDPFQCLAVC NL+EA+RS SPET+ISHIP+HQDGSCNGLQHYAALGRD+LGAAAVNL
Sbjct: 687 NAEDPFQCLAVCINLSEAVRSSSPETSISHIPVHQDGSCNGLQHYAALGRDELGAAAVNL 746
Query: 1392 VAGEKPADVYSGIATRVLEIMKRDAQKDPAVFPDALRARVLINHVDRKLVKQTVMTSVYG 1213
VAGEKPADVYSGIA RVL+IMKRDAQ+DPA FPDA+RAR L+N VDRKLVKQTVMTSVYG
Sbjct: 747 VAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRARALVNQVDRKLVKQTVMTSVYG 806
Query: 1212 VTYIGARDQIKRRLKERDAIADESELFGASCYAAKITLTALGEMFEAARDIMNWLGECAK 1033
VTYIGARDQIKRRLKER AIAD+SELFGA+CYAAK+TLTALGEMFEAAR IM WLGECAK
Sbjct: 807 VTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAK 866
Query: 1032 IIASENEPVRWTTPLGLPVVQPYRQIARSLVRTSLQILTLTRETDKVMVKRQRTAFPPNF 853
IIASENEPVRWTTPLGLPVVQPYR+I R L++TSLQILTL RET+KVMVKRQRTAFPPNF
Sbjct: 867 IIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQRETEKVMVKRQRTAFPPNF 926
Query: 852 VHSLDGCHMMMTALACKKAGMNFAGVHDSYWTHACDVDELNRILREKFVELYETPVLENL 673
+HSLDG HMMMTA+AC++AG+NFAGVHDSYWTHACDVD+LNRILREKFVELYETP+LE L
Sbjct: 927 IHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYETPILEKL 986
Query: 672 LEGFQKXXXXXXXXXXPERGDFDLNDVLTSTYFFN 568
LE FQ PERGDFDL DVL S YFFN
Sbjct: 987 LESFQTSYPTLLFPPLPERGDFDLRDVLESPYFFN 1021
>NP_001311818.1 DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial
[Nicotiana tabacum] Q8L6J3.2 RecName: Full=DNA-directed
RNA polymerase 2B, chloroplastic/mitochondrial; AltName:
Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 2B; Flags: Precursor
CAC95020.1 mitochondrial and chloroplast RNA polymerase
[Nicotiana tabacum]
Length = 1021
Score = 1428 bits (3696), Expect = 0.0
Identities = 731/1055 (69%), Positives = 837/1055 (79%), Gaps = 8/1055 (0%)
Frame = -1
Query: 3708 INFSLKIEPFVHPLDKPLKNLSKPPQNSPIMWRNIAKQVSSRTLSSKLFCLNNKINYLSS 3529
I+ ++K+ F DKP NSPIMWRNI KQ+SSRT LF N+
Sbjct: 8 ISLTIKLNQFT---DKPTGLDINRYHNSPIMWRNIIKQLSSRTPQKLLFSSKNRT----- 59
Query: 3528 FYSSKRFSGLSQDLIFIHSFKCRP--QDFCSYVLDSEYPKKGLRNFCQFSSNDEFFSRPK 3355
YS F G QD +F + K R CS ++ G +N ++ DEF SRP
Sbjct: 60 -YS---FLGFGQDSVFKDNTKFRSLIPISCSNIV------MGFQNLGEYLPGDEFLSRPL 109
Query: 3354 LYNLKNDIKNYGLCPKRYASVAEAVEVSNTDVDE-VGVLHXXXXXXXXXXXXXXELLKEL 3178
L N N N C K YASVAEAV VS+TD +E V V+ LL EL
Sbjct: 110 LKNQVNS--NDFCCRKSYASVAEAVAVSSTDAEEDVSVVDEVQE-----------LLTEL 156
Query: 3177 RSQERRQSSAKRRRQFRIACGMSHKKYRTLKRRQVKIETEAWEQAANEYTELLQDMCRHK 2998
+ +E++Q + +RR+Q + GM H+KY+TLKRRQVK+ETEAWEQAA EY ELL DMC K
Sbjct: 157 KKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQK 216
Query: 2997 LAPNLPYMKSLFLGWFEPLRDRIVQEQDSFMQGETKTTCAMYFNLLPAEKMAVITMHKLT 2818
LAPNLPY+KSLFLGWFEPLRD+I +EQ+ QG++K A Y LPA+ MAVITMHKL
Sbjct: 217 LAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYLYQLPADMMAVITMHKLM 276
Query: 2817 SLLMSGTDHHYGNTRFVNAACLIGDAIEQEVRIHNLLEQTXXXXXXKADGIILEEDQSSE 2638
LLM+G DH G R V AA +IGDAIEQEVRIHN LE+T E+D+ E
Sbjct: 277 GLLMTGGDH--GTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKA--------EKDKQKE 326
Query: 2637 DA----QDKEKLKRTVTNLMKKQKLRAVNQILKRRDDSKPWGAEAKAKVGSRLIELLLQT 2470
D Q++EKL++ VTNLMKKQKLRAV QI++R+DDSKPWG +AKAKVGSRLIELLLQT
Sbjct: 327 DGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDAKAKVGSRLIELLLQT 386
Query: 2469 AYIQQ-ADQTHDGSPDIRPAFVHTVKTLIKESKFASRRYGVIQCDPQILKGLEKTARHMV 2293
AYIQ A+Q PDIRPAF+H+V+T+ KE+K ASRRYG+IQCD + KGLE+TARHMV
Sbjct: 387 AYIQPPANQLAVDPPDIRPAFLHSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHMV 446
Query: 2292 IPYMPMLIPPFKWTGYEEGAHIFLPSYVMRTHGSRQQRDVIRRTPRKQLEMVFEALDTLG 2113
IPYMPML+PP KWTGY++G H++LPSYVMRTHG+RQQR+ ++R R QL+ VFEALDTLG
Sbjct: 447 IPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLG 506
Query: 2112 STKWRINKRVLNIIDRIWASGGRLADLVDREDIPLPEEPDTDDENQLKKWRWKVNSVKKE 1933
STKWRINKRVL++IDRIWA GGRLADLVDR+D PLPEEPDT+DE KWRWKV SVKKE
Sbjct: 507 STKWRINKRVLSVIDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKE 566
Query: 1932 NSERYSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDVCRGILEF 1753
N ER+SQRCDIELKLAVARKMKDEEGF+YPHN+DFRGRAYPMHPHLNHLGSD+CRG+L F
Sbjct: 567 NRERHSQRCDIELKLAVARKMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLVF 626
Query: 1752 AEGHRLGTSGLRWLKIHLANLYANGVDKLSSEGRIAFTESHLDEIFDSTDRPLEGQRWWL 1573
AEG LG SGLRWLKIHLANL+A GV+KLS EGRIAFTE+H+D+IFDS D+PLEG+RWWL
Sbjct: 627 AEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIAFTENHMDDIFDSADKPLEGRRWWL 686
Query: 1572 NAEDPFQCLAVCFNLTEALRSPSPETTISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNL 1393
NAEDPFQCLAVC NL+EA+RS SPET+ISHIP+HQDGSCNGLQHYAALGRD+LGAAAVNL
Sbjct: 687 NAEDPFQCLAVCINLSEAVRSSSPETSISHIPVHQDGSCNGLQHYAALGRDELGAAAVNL 746
Query: 1392 VAGEKPADVYSGIATRVLEIMKRDAQKDPAVFPDALRARVLINHVDRKLVKQTVMTSVYG 1213
VAGEKPADVYSGIA RVL+IMKRDAQ+DPA FPDA+RAR L+N VDRKLVKQTVMTSVYG
Sbjct: 747 VAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRARALVNQVDRKLVKQTVMTSVYG 806
Query: 1212 VTYIGARDQIKRRLKERDAIADESELFGASCYAAKITLTALGEMFEAARDIMNWLGECAK 1033
VTYIGARDQIKRRLKER AIAD+SELFGA+CYAAK+TLTALGEMFEAAR IM WLGECAK
Sbjct: 807 VTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAK 866
Query: 1032 IIASENEPVRWTTPLGLPVVQPYRQIARSLVRTSLQILTLTRETDKVMVKRQRTAFPPNF 853
IIASENEPVRWTTPLGLPVVQPYR+I R L++TSLQILTL +ET+KVMVKRQRTAFPPNF
Sbjct: 867 IIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQQETEKVMVKRQRTAFPPNF 926
Query: 852 VHSLDGCHMMMTALACKKAGMNFAGVHDSYWTHACDVDELNRILREKFVELYETPVLENL 673
+HSLDG HMMMTA+AC++AG+NFAGVHDSYWTHACDVD+LNRILREKFVELYETP+LE L
Sbjct: 927 IHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYETPILEKL 986
Query: 672 LEGFQKXXXXXXXXXXPERGDFDLNDVLTSTYFFN 568
LE FQ PERGDFDL DVL S YFFN
Sbjct: 987 LESFQTSYPTLLFPPLPERGDFDLRDVLESPYFFN 1021
>XP_019234815.1 PREDICTED: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial [Nicotiana attenuata]
OIT26485.1 dna-directed rna polymerase 2b,
chloroplasticmitochondrial [Nicotiana attenuata]
Length = 1024
Score = 1423 bits (3683), Expect = 0.0
Identities = 729/1058 (68%), Positives = 834/1058 (78%), Gaps = 11/1058 (1%)
Frame = -1
Query: 3708 INFSLKIEPFVHPLDKPLKNLSKPPQNSPIMWRNIAKQVSSRTLSSKLFCLNNKINYLSS 3529
I+ ++K+ F DKP P NSPIMWRNI KQ+SSRT LF N+
Sbjct: 8 ISLTIKLNQFT---DKPTGLAINPYHNSPIMWRNIIKQLSSRTPQKLLFSSKNRT----- 59
Query: 3528 FYSSKRFSGLSQDLIFIHSFKCRP--QDFCSYVLDSEYPKKGLRNFCQFSSNDEFFSRPK 3355
YS F G QD IF + K R CS + + G +N + DEF SRP
Sbjct: 60 -YS---FLGFRQDSIFKDNTKFRSLIPISCSNI------EMGFQNLGENLPGDEFLSRPL 109
Query: 3354 LYNLKNDIKNYGLC----PKRYASVAEAVEVSNTDVDEVGVLHXXXXXXXXXXXXXXELL 3187
+ KN + N C K YASVAEAV VS+TD +E ELL
Sbjct: 110 I---KNQVNNNDFCYFCFRKSYASVAEAVAVSSTDAEE----------DVPVVDEVQELL 156
Query: 3186 KELRSQERRQSSAKRRRQFRIACGMSHKKYRTLKRRQVKIETEAWEQAANEYTELLQDMC 3007
EL+ +E++Q + +RR+Q + GM H+KY+ LKRRQVK+ETEAWEQAA EY ELL DMC
Sbjct: 157 TELKKEEKKQFAFRRRKQKMLTSGMGHRKYQALKRRQVKVETEAWEQAAKEYKELLFDMC 216
Query: 3006 RHKLAPNLPYMKSLFLGWFEPLRDRIVQEQDSFMQGETKTTCAMYFNLLPAEKMAVITMH 2827
KLAPNLPY+KSLFLGWFEPLRD+I +EQ+ QG++K A YF LPA+ MAVITMH
Sbjct: 217 EKKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAGYAKYFYQLPADMMAVITMH 276
Query: 2826 KLTSLLMSGTDHHYGNTRFVNAACLIGDAIEQEVRIHNLLEQTXXXXXXKADGIILEEDQ 2647
KL LLM+G DH G R V AA +IGDAIEQEVRIHN LE+T E+D+
Sbjct: 277 KLMGLLMTGGDH--GTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKA--------EKDR 326
Query: 2646 SSEDA----QDKEKLKRTVTNLMKKQKLRAVNQILKRRDDSKPWGAEAKAKVGSRLIELL 2479
ED Q++EKL++ VTNLMKKQKLRAV QI++R+DDSKPWG +AKAKVGSRLIELL
Sbjct: 327 QKEDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDAKAKVGSRLIELL 386
Query: 2478 LQTAYIQQ-ADQTHDGSPDIRPAFVHTVKTLIKESKFASRRYGVIQCDPQILKGLEKTAR 2302
LQTAYIQ A+Q PDIRPAF+H+V+T+ KE+K ASRRYG+IQCD + KGLE+TAR
Sbjct: 387 LQTAYIQPPANQLAVDPPDIRPAFLHSVRTVAKETKSASRRYGIIQCDELVFKGLERTAR 446
Query: 2301 HMVIPYMPMLIPPFKWTGYEEGAHIFLPSYVMRTHGSRQQRDVIRRTPRKQLEMVFEALD 2122
HMVIPYMPML+PP KWTGY++G H++LPSYVMRTHG+RQQR+ ++R R QL+ VFEALD
Sbjct: 447 HMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALD 506
Query: 2121 TLGSTKWRINKRVLNIIDRIWASGGRLADLVDREDIPLPEEPDTDDENQLKKWRWKVNSV 1942
TLGSTKWRINKRVL+++DRIWA GGRLADLVDR+D LPEEPDT+DE KWRWKV SV
Sbjct: 507 TLGSTKWRINKRVLSVVDRIWAGGGRLADLVDRDDSLLPEEPDTEDEALRTKWRWKVKSV 566
Query: 1941 KKENSERYSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDVCRGI 1762
KKEN ER+SQRCDIELKLAVARKMKDEEGF+YPHN+DFRGRAYPMHPHLNHLGSD+CRG+
Sbjct: 567 KKENRERHSQRCDIELKLAVARKMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGV 626
Query: 1761 LEFAEGHRLGTSGLRWLKIHLANLYANGVDKLSSEGRIAFTESHLDEIFDSTDRPLEGQR 1582
LEFA G LG SGLRWLKIHLANL+A GV+KLS EGRIAFTE+H+D+IFDS D+PLEG+R
Sbjct: 627 LEFAVGRPLGESGLRWLKIHLANLFAGGVEKLSHEGRIAFTENHMDDIFDSADKPLEGRR 686
Query: 1581 WWLNAEDPFQCLAVCFNLTEALRSPSPETTISHIPIHQDGSCNGLQHYAALGRDKLGAAA 1402
WWLNAEDPFQCLAVC NL+E +RS SPET+ISHIP+HQDGSCNGLQHYAALGRDKLGAAA
Sbjct: 687 WWLNAEDPFQCLAVCINLSEVVRSSSPETSISHIPVHQDGSCNGLQHYAALGRDKLGAAA 746
Query: 1401 VNLVAGEKPADVYSGIATRVLEIMKRDAQKDPAVFPDALRARVLINHVDRKLVKQTVMTS 1222
VNLVAGEKPADVYSGIA RVL+IMKRDAQ+DPA FPDA+RAR L+N VDRKLVKQTVMTS
Sbjct: 747 VNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRARALVNQVDRKLVKQTVMTS 806
Query: 1221 VYGVTYIGARDQIKRRLKERDAIADESELFGASCYAAKITLTALGEMFEAARDIMNWLGE 1042
VYGVTYIGARDQIKRRLKER AIAD+SELFGA+CYAAK+TLTALGEMFEAAR IM WLGE
Sbjct: 807 VYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTWLGE 866
Query: 1041 CAKIIASENEPVRWTTPLGLPVVQPYRQIARSLVRTSLQILTLTRETDKVMVKRQRTAFP 862
CAKIIASENEPVRWTTPLGLPVVQPYR+I R L++TSLQILTL RET+KVMVKRQRTAFP
Sbjct: 867 CAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQRETEKVMVKRQRTAFP 926
Query: 861 PNFVHSLDGCHMMMTALACKKAGMNFAGVHDSYWTHACDVDELNRILREKFVELYETPVL 682
PNF+HSLDG HMMMTA+AC++AG+NFAGVHDSYWTHACDVD+LNRILREKFVELY+TP+L
Sbjct: 927 PNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYDTPIL 986
Query: 681 ENLLEGFQKXXXXXXXXXXPERGDFDLNDVLTSTYFFN 568
E LLE FQ PERGDFDL DVL S YFFN
Sbjct: 987 EKLLESFQTSYPTLLFPPLPERGDFDLRDVLESPYFFN 1024
>XP_015063457.1 PREDICTED: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial isoform X1 [Solanum
pennellii]
Length = 1020
Score = 1410 bits (3651), Expect = 0.0
Identities = 717/1065 (67%), Positives = 832/1065 (78%), Gaps = 6/1065 (0%)
Frame = -1
Query: 3744 SC*NSPENLMSSINFSLKIEPFVHPLDKPLKNLSKPPQNSPIMWRNIAKQVSSRTLSSKL 3565
SC +P +L N L+ P+ NSPIMWRNI KQ S+RT L
Sbjct: 2 SCTKTPISLTIKFNTDLETNPY---------------HNSPIMWRNIVKQFSTRTPQKIL 46
Query: 3564 FCLNNKINYLSSFYSSKRFSGLSQDLIFIHSFKCRPQDFCSYVLDSEYPKKGLRNFCQFS 3385
N F F +D + SF CS +S + + G +N +F
Sbjct: 47 LTSKNHAYSYLGFGLDSVF----KDKRILRSFI---PVSCS---NSGFLEMGFQNLGEFL 96
Query: 3384 SNDEFFSRPKLYNLKNDIKNYGLCPKRYASVAEAVEVSNTDVDE-VGVLHXXXXXXXXXX 3208
DEF RP L +K+ + N +C K YASVAEAV VS+TD +E V V+
Sbjct: 97 PGDEFLRRPLLCAMKSQVSNNDICRKNYASVAEAVAVSSTDAEEDVSVV----------- 145
Query: 3207 XXXXELLKELRSQERRQSSAKRRRQFRIACGMSHKKYRTLKRRQVKIETEAWEQAANEYT 3028
ELL EL+ +E++Q + +RR+Q + G+ +KY L RRQV+IET+AWEQAA EY
Sbjct: 146 GEVQELLTELKKEEKKQFTFRRRKQRMLTSGIDRRKYPALMRRQVQIETQAWEQAAKEYR 205
Query: 3027 ELLQDMCRHKLAPNLPYMKSLFLGWFEPLRDRIVQEQDSFMQGETKTTCAMYFNLLPAEK 2848
ELL DMC KLAPNLPY+KSLFLGWFEPLR++I QEQ+ +QG++K + YF+LLPA+
Sbjct: 206 ELLFDMCEQKLAPNLPYVKSLFLGWFEPLRNKIAQEQELCIQGKSKAAYSKYFHLLPADM 265
Query: 2847 MAVITMHKLTSLLMSGTDHHYGNTRFVNAACLIGDAIEQEVRIHNLLEQTXXXXXXKADG 2668
MAVITMHKL LLM+G +H GN R V AA IGDAIEQEVRIH LE+T
Sbjct: 266 MAVITMHKLMGLLMTGGEH--GNVRVVQAALAIGDAIEQEVRIHKFLEKTEKHKA----- 318
Query: 2667 IILEEDQSSEDAQ----DKEKLKRTVTNLMKKQKLRAVNQILKRRDDSKPWGAEAKAKVG 2500
E+D++ +D + +++KL + VT+LMKKQKLRAVNQI++ +DDSKPWG +AKAKVG
Sbjct: 319 ---EKDRNIKDGEHATLEQKKLHKKVTSLMKKQKLRAVNQIVRSQDDSKPWGQDAKAKVG 375
Query: 2499 SRLIELLLQTAYIQQ-ADQTHDGSPDIRPAFVHTVKTLIKESKFASRRYGVIQCDPQILK 2323
SRLIE LLQTAYIQ ADQ PDIRPAF+H+ +TL KE+K ASRRYGVIQCD + K
Sbjct: 376 SRLIEFLLQTAYIQSPADQLAVDPPDIRPAFIHSTRTLAKETKSASRRYGVIQCDELVFK 435
Query: 2322 GLEKTARHMVIPYMPMLIPPFKWTGYEEGAHIFLPSYVMRTHGSRQQRDVIRRTPRKQLE 2143
GLE+TARHMVIPYMPML+PP KWTGY++G H++LPSYVMRTHG+RQQR+ ++R R QL+
Sbjct: 436 GLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQ 495
Query: 2142 MVFEALDTLGSTKWRINKRVLNIIDRIWASGGRLADLVDREDIPLPEEPDTDDENQLKKW 1963
VFEALDTLGSTKWRINKRVL+++DRIWA GGRLADLVDR+D+PLPEEPDT+DE KW
Sbjct: 496 PVFEALDTLGSTKWRINKRVLSVVDRIWAGGGRLADLVDRDDVPLPEEPDTEDEAVCTKW 555
Query: 1962 RWKVNSVKKENSERYSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLG 1783
RWKV SVKKEN ER+SQRCDIELKLAVA +MKDEEGF+YPHN+DFRGRAYPMHPHLNHLG
Sbjct: 556 RWKVKSVKKENRERHSQRCDIELKLAVAHRMKDEEGFFYPHNVDFRGRAYPMHPHLNHLG 615
Query: 1782 SDVCRGILEFAEGHRLGTSGLRWLKIHLANLYANGVDKLSSEGRIAFTESHLDEIFDSTD 1603
SD+CRG+LEFA G LG SGLRWLKIHLANL+A GVDKLS +GRIAFTESHLD+IFDS D
Sbjct: 616 SDICRGVLEFAAGRPLGESGLRWLKIHLANLFAGGVDKLSLDGRIAFTESHLDDIFDSAD 675
Query: 1602 RPLEGQRWWLNAEDPFQCLAVCFNLTEALRSPSPETTISHIPIHQDGSCNGLQHYAALGR 1423
+PLEG+RWWLNAEDPFQCLAVC NL+EA+RS SPET ISH+P+HQDGSCNGLQHYAALGR
Sbjct: 676 KPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETVISHVPVHQDGSCNGLQHYAALGR 735
Query: 1422 DKLGAAAVNLVAGEKPADVYSGIATRVLEIMKRDAQKDPAVFPDALRARVLINHVDRKLV 1243
DKLGAAAVNLVAGEKPADVYSGIA RVL+IM RDAQ+DPA FPDA+RARVL+N VDRKLV
Sbjct: 736 DKLGAAAVNLVAGEKPADVYSGIAARVLDIMNRDAQRDPAEFPDAVRARVLVNQVDRKLV 795
Query: 1242 KQTVMTSVYGVTYIGARDQIKRRLKERDAIADESELFGASCYAAKITLTALGEMFEAARD 1063
KQTVMTSVYGVTYIGARDQIKRRLKER AIAD++ELFGA+CYAAK+TLTALGEMFEAAR
Sbjct: 796 KQTVMTSVYGVTYIGARDQIKRRLKERGAIADDTELFGAACYAAKVTLTALGEMFEAARS 855
Query: 1062 IMNWLGECAKIIASENEPVRWTTPLGLPVVQPYRQIARSLVRTSLQILTLTRETDKVMVK 883
IM WLGECAKIIASENEPVRWTTPLGLPVVQPYR+I R ++TSLQILTL RET+KVMVK
Sbjct: 856 IMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHFIKTSLQILTLQRETEKVMVK 915
Query: 882 RQRTAFPPNFVHSLDGCHMMMTALACKKAGMNFAGVHDSYWTHACDVDELNRILREKFVE 703
RQRTAFPPNF+HSLDG HMMMTA+AC++AG+NFAGVHDSYWTHACDVD+LNRILREKFVE
Sbjct: 916 RQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVE 975
Query: 702 LYETPVLENLLEGFQKXXXXXXXXXXPERGDFDLNDVLTSTYFFN 568
LYETP+LE LLEGFQ PERGDFDL DV+ S YFFN
Sbjct: 976 LYETPILEKLLEGFQVSYPTLSFPPLPERGDFDLRDVIESPYFFN 1020
>XP_004232127.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial [Solanum lycopersicum]
Length = 1022
Score = 1409 bits (3647), Expect = 0.0
Identities = 713/1032 (69%), Positives = 822/1032 (79%), Gaps = 6/1032 (0%)
Frame = -1
Query: 3645 SKPPQNSPIMWRNIAKQVSSRTLSSKLFCLNNKINYLSSFYSSKRFSGLSQDLIFIHSFK 3466
+ P SPIMWRNI KQ S+RT L N F F +D + SF
Sbjct: 22 TNPYHISPIMWRNIVKQFSTRTPQKILLTSKNHAYSYLGFGLHSVF----KDKRTLRSFI 77
Query: 3465 CRPQDFCSYVLDSEYPKKGLRNFCQFSSNDEFFSRPKLYNLKNDIKNYGLCPKRYASVAE 3286
CS +S + + G +N +F DEF RP L +K+ + N +C K YASVAE
Sbjct: 78 ---PVSCS---NSGFLEMGFQNLGEFLPGDEFLRRPLLCAMKSQVSNNDICRKNYASVAE 131
Query: 3285 AVEVSNTDVDE-VGVLHXXXXXXXXXXXXXXELLKELRSQERRQSSAKRRRQFRIACGMS 3109
AV VS+TD +E V V+ ELL EL+ +E++Q + +RR+Q + G+
Sbjct: 132 AVAVSSTDAEEDVSVV-----------GEVQELLTELKKEEKKQFTFRRRKQRMLTSGID 180
Query: 3108 HKKYRTLKRRQVKIETEAWEQAANEYTELLQDMCRHKLAPNLPYMKSLFLGWFEPLRDRI 2929
+KY L RRQVKIET+AWEQAA EY ELL DMC KLAPNLPY+KSLFLGWFEPLRD+I
Sbjct: 181 RRKYPALMRRQVKIETQAWEQAAKEYRELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKI 240
Query: 2928 VQEQDSFMQGETKTTCAMYFNLLPAEKMAVITMHKLTSLLMSGTDHHYGNTRFVNAACLI 2749
QEQ+ +QG++K + YF+LLPA+ MAVITMHKL LLM+G +H GN R V AA I
Sbjct: 241 AQEQELCIQGKSKAAYSKYFHLLPADMMAVITMHKLMGLLMTGGEH--GNVRVVQAALTI 298
Query: 2748 GDAIEQEVRIHNLLEQTXXXXXXKADGIILEEDQSSEDAQ----DKEKLKRTVTNLMKKQ 2581
GDAIEQEVRIH LE+T E+D++ ED + +++KL + VT+LMKKQ
Sbjct: 299 GDAIEQEVRIHKFLEKTEKHKA--------EKDRNMEDGEHATLEQKKLHKKVTSLMKKQ 350
Query: 2580 KLRAVNQILKRRDDSKPWGAEAKAKVGSRLIELLLQTAYIQQ-ADQTHDGSPDIRPAFVH 2404
KLRAVNQI++ +DDSKPWG +AKAKVGSRLIE LLQTAYIQ ADQ PDIRPAF+H
Sbjct: 351 KLRAVNQIVRSQDDSKPWGQDAKAKVGSRLIEFLLQTAYIQSPADQLAVDPPDIRPAFIH 410
Query: 2403 TVKTLIKESKFASRRYGVIQCDPQILKGLEKTARHMVIPYMPMLIPPFKWTGYEEGAHIF 2224
+ +TL KE+K ASRRYGVIQCD + KGLE+TARHMVIPYMPML+PP KWTGY++G H++
Sbjct: 411 STRTLAKETKSASRRYGVIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLY 470
Query: 2223 LPSYVMRTHGSRQQRDVIRRTPRKQLEMVFEALDTLGSTKWRINKRVLNIIDRIWASGGR 2044
LPSYVMRTHG+RQQR+ ++RT R QL+ VFEALDTLGSTKWRINKRVL+++DRIWA GGR
Sbjct: 471 LPSYVMRTHGARQQREAVKRTSRNQLQPVFEALDTLGSTKWRINKRVLSVVDRIWAGGGR 530
Query: 2043 LADLVDREDIPLPEEPDTDDENQLKKWRWKVNSVKKENSERYSQRCDIELKLAVARKMKD 1864
LADLVDR+D+PLPEEPDT+DE KWRWKV SVKKEN ER+SQRCDIELKLAVA +MKD
Sbjct: 531 LADLVDRDDVPLPEEPDTEDEAVCTKWRWKVKSVKKENRERHSQRCDIELKLAVAHRMKD 590
Query: 1863 EEGFYYPHNLDFRGRAYPMHPHLNHLGSDVCRGILEFAEGHRLGTSGLRWLKIHLANLYA 1684
EEGF+YPHN+DFRGRAYPMHPHLNHLGSD+CRG+LEFA G LG SGLRWLKIHLANL+A
Sbjct: 591 EEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAAGRPLGKSGLRWLKIHLANLFA 650
Query: 1683 NGVDKLSSEGRIAFTESHLDEIFDSTDRPLEGQRWWLNAEDPFQCLAVCFNLTEALRSPS 1504
GVDKLS +GRIAFTESHLD+IFDS D+PLEG+ WWLNAEDPFQCLAVC NL+EA+RS S
Sbjct: 651 GGVDKLSLDGRIAFTESHLDDIFDSADKPLEGRCWWLNAEDPFQCLAVCINLSEAVRSSS 710
Query: 1503 PETTISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIATRVLEIMKR 1324
PET ISH+P+HQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA RVL+IM R
Sbjct: 711 PETVISHVPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMNR 770
Query: 1323 DAQKDPAVFPDALRARVLINHVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDAIADE 1144
DAQ+DPA FPDA+RARVL+N VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER AIAD+
Sbjct: 771 DAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADD 830
Query: 1143 SELFGASCYAAKITLTALGEMFEAARDIMNWLGECAKIIASENEPVRWTTPLGLPVVQPY 964
+ELFGA+CYAAK+TLTALGEMFEAAR IM WLGECAKIIASENEPVRWTTPLGLPVVQPY
Sbjct: 831 TELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPY 890
Query: 963 RQIARSLVRTSLQILTLTRETDKVMVKRQRTAFPPNFVHSLDGCHMMMTALACKKAGMNF 784
R+I R ++TSLQILTL RET+KVMVKRQRTAFPPNF+HSLDG HMMMTA+AC++AG+NF
Sbjct: 891 RKIGRHFIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNF 950
Query: 783 AGVHDSYWTHACDVDELNRILREKFVELYETPVLENLLEGFQKXXXXXXXXXXPERGDFD 604
AGVHDSYWTHACDVD+LNRILREKFVELYETP+LE LLEGFQ PERGDFD
Sbjct: 951 AGVHDSYWTHACDVDKLNRILREKFVELYETPILEKLLEGFQVSYPTLSFPPLPERGDFD 1010
Query: 603 LNDVLTSTYFFN 568
L DV+ S YFFN
Sbjct: 1011 LRDVIESPYFFN 1022
>XP_006338320.1 PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
[Solanum tuberosum]
Length = 1019
Score = 1405 bits (3638), Expect = 0.0
Identities = 717/1034 (69%), Positives = 820/1034 (79%), Gaps = 8/1034 (0%)
Frame = -1
Query: 3645 SKPPQNSPIMWRNIAKQVSSRTLSSKLFCLNNKINYLSSFYSSKRFSGLSQDLIFIHSFK 3466
+ P QNSPIMWRNI KQ SSRT L N+ YS F G QD +F
Sbjct: 22 TNPYQNSPIMWRNIVKQFSSRTPQKILLTSKNRT------YS---FLGFGQDSVFKDKRI 72
Query: 3465 CRP--QDFCSYVLDSEYPKKGLRNFCQFSSNDEFFSRPKLYNLKNDIKNYGLCPKRYASV 3292
R CS +S + + G +N +F DEF RP L +K+ + N +C K YASV
Sbjct: 73 LRSFIPVSCS---NSGFLEMGFQNLGEF---DEFLRRPLLCAMKSQVSNNDICRKSYASV 126
Query: 3291 AEAVEVSNTDVDE-VGVLHXXXXXXXXXXXXXXELLKELRSQERRQSSAKRRRQFRIACG 3115
AEAV VS+TD +E V V+ ELL EL+ +E++Q + +RR Q + G
Sbjct: 127 AEAVAVSSTDAEEDVSVV-----------GEVQELLTELKKEEKKQFTFRRRNQRLLTSG 175
Query: 3114 MSHKKYRTLKRRQVKIETEAWEQAANEYTELLQDMCRHKLAPNLPYMKSLFLGWFEPLRD 2935
+ +KY LKRRQVKIET+AWE AA EY ELL DMC KLAPNLPY+KSLFLGWFEPLRD
Sbjct: 176 IDRRKYPALKRRQVKIETQAWELAAKEYRELLFDMCEQKLAPNLPYVKSLFLGWFEPLRD 235
Query: 2934 RIVQEQDSFMQGETKTTCAMYFNLLPAEKMAVITMHKLTSLLMSGTDHHYGNTRFVNAAC 2755
+I QEQ+ +QG++K + YF+LLPA+ MAVITMHKL LLM+G +H GN R V AA
Sbjct: 236 KIAQEQELCIQGKSKAAYSKYFHLLPADMMAVITMHKLMGLLMTGGEH--GNARVVQAAL 293
Query: 2754 LIGDAIEQEVRIHNLLEQTXXXXXXKADGIILEEDQSSEDAQ----DKEKLKRTVTNLMK 2587
IGDAIEQEVRIH LE+T E+D+ ED + +++KL + VT+LMK
Sbjct: 294 TIGDAIEQEVRIHKFLEKTEKHKA--------EKDRKMEDGEHATLEQKKLHKKVTSLMK 345
Query: 2586 KQKLRAVNQILKRRDDSKPWGAEAKAKVGSRLIELLLQTAYIQQ-ADQTHDGSPDIRPAF 2410
KQKLRAVNQI++ +DDSKPWG +AKAKVGSRLIE LLQTAYIQ ADQ PDIRPAF
Sbjct: 346 KQKLRAVNQIVRSQDDSKPWGQDAKAKVGSRLIEFLLQTAYIQSPADQLAVDPPDIRPAF 405
Query: 2409 VHTVKTLIKESKFASRRYGVIQCDPQILKGLEKTARHMVIPYMPMLIPPFKWTGYEEGAH 2230
+H+ +T+ KE+K ASRRYGVIQCD + KGLE+TARHMVIPYMPML+PP KWTGY++G H
Sbjct: 406 IHSTRTVAKETKSASRRYGVIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGH 465
Query: 2229 IFLPSYVMRTHGSRQQRDVIRRTPRKQLEMVFEALDTLGSTKWRINKRVLNIIDRIWASG 2050
++LPSYVMRTHG+RQQR+ ++R R QL VFEALDTLGSTKWRINKRVL+++DRIWA G
Sbjct: 466 LYLPSYVMRTHGARQQREAVKRASRNQLRPVFEALDTLGSTKWRINKRVLSVVDRIWAGG 525
Query: 2049 GRLADLVDREDIPLPEEPDTDDENQLKKWRWKVNSVKKENSERYSQRCDIELKLAVARKM 1870
GRLADLVDR+D PLPEEPDT+DE KWRWKV SVKKEN ER+SQRCDIELKLAVA +M
Sbjct: 526 GRLADLVDRDDAPLPEEPDTEDEAVCTKWRWKVKSVKKENRERHSQRCDIELKLAVAHRM 585
Query: 1869 KDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDVCRGILEFAEGHRLGTSGLRWLKIHLANL 1690
KDEEGF+YPHN+DFRGRAYPMHPHLNHLGSD+CRG+LEFA G LG SGLRWLKIHLANL
Sbjct: 586 KDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAAGRPLGESGLRWLKIHLANL 645
Query: 1689 YANGVDKLSSEGRIAFTESHLDEIFDSTDRPLEGQRWWLNAEDPFQCLAVCFNLTEALRS 1510
+A GVDKLS +GRIAFTESHLD+IFDS D+PLEG+RWWLNAEDPFQCLAVC NL+EA+RS
Sbjct: 646 FAGGVDKLSLDGRIAFTESHLDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRS 705
Query: 1509 PSPETTISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIATRVLEIM 1330
SPET ISHIP+HQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA RVL+IM
Sbjct: 706 SSPETVISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIM 765
Query: 1329 KRDAQKDPAVFPDALRARVLINHVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDAIA 1150
RDAQ+DPA FPDA+RARVL+N VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER AIA
Sbjct: 766 NRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIA 825
Query: 1149 DESELFGASCYAAKITLTALGEMFEAARDIMNWLGECAKIIASENEPVRWTTPLGLPVVQ 970
D+SELFGA+ YAAK+TLTALGEMFEAAR IM WL ECAKIIASENEPVRWTTPLGLPVVQ
Sbjct: 826 DDSELFGAASYAAKVTLTALGEMFEAARSIMTWLAECAKIIASENEPVRWTTPLGLPVVQ 885
Query: 969 PYRQIARSLVRTSLQILTLTRETDKVMVKRQRTAFPPNFVHSLDGCHMMMTALACKKAGM 790
PYR+I R ++TSLQILTL RET+KVMVKRQRTAFPPNF+HSLDG HMMMTA+AC++AG+
Sbjct: 886 PYRKIGRHFIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGL 945
Query: 789 NFAGVHDSYWTHACDVDELNRILREKFVELYETPVLENLLEGFQKXXXXXXXXXXPERGD 610
NFAGVHDSYWTHACDVD+LNRILREKFVELYETP+LE LLE FQ PERGD
Sbjct: 946 NFAGVHDSYWTHACDVDKLNRILREKFVELYETPILEKLLESFQVSYPTLSFPPLPERGD 1005
Query: 609 FDLNDVLTSTYFFN 568
FDL DV+ S YFFN
Sbjct: 1006 FDLRDVIESPYFFN 1019
>XP_015063458.1 PREDICTED: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial isoform X2 [Solanum
pennellii]
Length = 1019
Score = 1405 bits (3636), Expect = 0.0
Identities = 716/1065 (67%), Positives = 831/1065 (78%), Gaps = 6/1065 (0%)
Frame = -1
Query: 3744 SC*NSPENLMSSINFSLKIEPFVHPLDKPLKNLSKPPQNSPIMWRNIAKQVSSRTLSSKL 3565
SC +P +L N L+ P+ NSPIMWRNI KQ S+RT L
Sbjct: 2 SCTKTPISLTIKFNTDLETNPY---------------HNSPIMWRNIVKQFSTRTPQKIL 46
Query: 3564 FCLNNKINYLSSFYSSKRFSGLSQDLIFIHSFKCRPQDFCSYVLDSEYPKKGLRNFCQFS 3385
N F F +D + SF CS +S + + G +N +F
Sbjct: 47 LTSKNHAYSYLGFGLDSVF----KDKRILRSFI---PVSCS---NSGFLEMGFQNLGEFL 96
Query: 3384 SNDEFFSRPKLYNLKNDIKNYGLCPKRYASVAEAVEVSNTDVDE-VGVLHXXXXXXXXXX 3208
DEF RP L +K+ + N +C K YASVAEAV VS+TD +E V V+
Sbjct: 97 PGDEFLRRPLLCAMKSQVSNNDICRKNYASVAEAVAVSSTDAEEDVSVV----------- 145
Query: 3207 XXXXELLKELRSQERRQSSAKRRRQFRIACGMSHKKYRTLKRRQVKIETEAWEQAANEYT 3028
ELL EL+ +E++Q + +RR+Q + G+ +KY L RRQV+IET+AWEQAA EY
Sbjct: 146 GEVQELLTELKKEEKKQFTFRRRKQRMLTSGIDRRKYPALMRRQVQIETQAWEQAAKEYR 205
Query: 3027 ELLQDMCRHKLAPNLPYMKSLFLGWFEPLRDRIVQEQDSFMQGETKTTCAMYFNLLPAEK 2848
ELL DMC KLAPNLPY+KSLFLGWFEPLR++I QEQ+ +QG++K + YF+LLPA+
Sbjct: 206 ELLFDMCEQKLAPNLPYVKSLFLGWFEPLRNKIAQEQELCIQGKSKAAYSKYFHLLPADM 265
Query: 2847 MAVITMHKLTSLLMSGTDHHYGNTRFVNAACLIGDAIEQEVRIHNLLEQTXXXXXXKADG 2668
MAVITMHKL LLM+G +H GN R V AA IGDAIEQEVRIH LE+T
Sbjct: 266 MAVITMHKLMGLLMTGGEH--GNVRVVQAALAIGDAIEQEVRIHKFLEKTEKHKA----- 318
Query: 2667 IILEEDQSSEDAQ----DKEKLKRTVTNLMKKQKLRAVNQILKRRDDSKPWGAEAKAKVG 2500
E+D++ +D + +++KL + VT+LMKKQKLRAVNQI++ +DDSKPWG +AKAKVG
Sbjct: 319 ---EKDRNIKDGEHATLEQKKLHKKVTSLMKKQKLRAVNQIVRSQDDSKPWGQDAKAKVG 375
Query: 2499 SRLIELLLQTAYIQQ-ADQTHDGSPDIRPAFVHTVKTLIKESKFASRRYGVIQCDPQILK 2323
SRLIE LLQTAYIQ ADQ PDIRPAF+H+ +TL KE+ ASRRYGVIQCD + K
Sbjct: 376 SRLIEFLLQTAYIQSPADQLAVDPPDIRPAFIHSTRTLAKETN-ASRRYGVIQCDELVFK 434
Query: 2322 GLEKTARHMVIPYMPMLIPPFKWTGYEEGAHIFLPSYVMRTHGSRQQRDVIRRTPRKQLE 2143
GLE+TARHMVIPYMPML+PP KWTGY++G H++LPSYVMRTHG+RQQR+ ++R R QL+
Sbjct: 435 GLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQ 494
Query: 2142 MVFEALDTLGSTKWRINKRVLNIIDRIWASGGRLADLVDREDIPLPEEPDTDDENQLKKW 1963
VFEALDTLGSTKWRINKRVL+++DRIWA GGRLADLVDR+D+PLPEEPDT+DE KW
Sbjct: 495 PVFEALDTLGSTKWRINKRVLSVVDRIWAGGGRLADLVDRDDVPLPEEPDTEDEAVCTKW 554
Query: 1962 RWKVNSVKKENSERYSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLG 1783
RWKV SVKKEN ER+SQRCDIELKLAVA +MKDEEGF+YPHN+DFRGRAYPMHPHLNHLG
Sbjct: 555 RWKVKSVKKENRERHSQRCDIELKLAVAHRMKDEEGFFYPHNVDFRGRAYPMHPHLNHLG 614
Query: 1782 SDVCRGILEFAEGHRLGTSGLRWLKIHLANLYANGVDKLSSEGRIAFTESHLDEIFDSTD 1603
SD+CRG+LEFA G LG SGLRWLKIHLANL+A GVDKLS +GRIAFTESHLD+IFDS D
Sbjct: 615 SDICRGVLEFAAGRPLGESGLRWLKIHLANLFAGGVDKLSLDGRIAFTESHLDDIFDSAD 674
Query: 1602 RPLEGQRWWLNAEDPFQCLAVCFNLTEALRSPSPETTISHIPIHQDGSCNGLQHYAALGR 1423
+PLEG+RWWLNAEDPFQCLAVC NL+EA+RS SPET ISH+P+HQDGSCNGLQHYAALGR
Sbjct: 675 KPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETVISHVPVHQDGSCNGLQHYAALGR 734
Query: 1422 DKLGAAAVNLVAGEKPADVYSGIATRVLEIMKRDAQKDPAVFPDALRARVLINHVDRKLV 1243
DKLGAAAVNLVAGEKPADVYSGIA RVL+IM RDAQ+DPA FPDA+RARVL+N VDRKLV
Sbjct: 735 DKLGAAAVNLVAGEKPADVYSGIAARVLDIMNRDAQRDPAEFPDAVRARVLVNQVDRKLV 794
Query: 1242 KQTVMTSVYGVTYIGARDQIKRRLKERDAIADESELFGASCYAAKITLTALGEMFEAARD 1063
KQTVMTSVYGVTYIGARDQIKRRLKER AIAD++ELFGA+CYAAK+TLTALGEMFEAAR
Sbjct: 795 KQTVMTSVYGVTYIGARDQIKRRLKERGAIADDTELFGAACYAAKVTLTALGEMFEAARS 854
Query: 1062 IMNWLGECAKIIASENEPVRWTTPLGLPVVQPYRQIARSLVRTSLQILTLTRETDKVMVK 883
IM WLGECAKIIASENEPVRWTTPLGLPVVQPYR+I R ++TSLQILTL RET+KVMVK
Sbjct: 855 IMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHFIKTSLQILTLQRETEKVMVK 914
Query: 882 RQRTAFPPNFVHSLDGCHMMMTALACKKAGMNFAGVHDSYWTHACDVDELNRILREKFVE 703
RQRTAFPPNF+HSLDG HMMMTA+AC++AG+NFAGVHDSYWTHACDVD+LNRILREKFVE
Sbjct: 915 RQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVE 974
Query: 702 LYETPVLENLLEGFQKXXXXXXXXXXPERGDFDLNDVLTSTYFFN 568
LYETP+LE LLEGFQ PERGDFDL DV+ S YFFN
Sbjct: 975 LYETPILEKLLEGFQVSYPTLSFPPLPERGDFDLRDVIESPYFFN 1019
>XP_011085577.1 PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
[Sesamum indicum]
Length = 1032
Score = 1402 bits (3630), Expect = 0.0
Identities = 721/1052 (68%), Positives = 837/1052 (79%), Gaps = 5/1052 (0%)
Frame = -1
Query: 3708 INFSLKIEPFVHPLDKPLKNLSKPPQNSPIMWRNIAKQVSSRTLSSKLFCLNNKINYLSS 3529
I+F KI+ P KP+ L+ P ++ +MWRNI KQVSSRT C N++ S
Sbjct: 8 ISFGFKIDNSRTPFHKPVLILN-PYRDCRVMWRNIVKQVSSRTPLK--LCRNSE-----S 59
Query: 3528 FYSSKRFSGLSQDLIFIHSFKCRPQDFCSYVLDSE----YPKKGLRNFCQFSSNDEFFSR 3361
+ F G +Q+ F FK RP + L+S +P+ G + FSS DEF
Sbjct: 60 LSRTCSFLGSAQESAFPDKFKFRPL----FELNSRPTFCFPELGFQKLGDFSSRDEFSPF 115
Query: 3360 PKLYNLKNDIKNYGLCPKRYASVAEAVEVSNTDVDEVGVLHXXXXXXXXXXXXXXELLKE 3181
P +N I GLC K YASVAEAV VS TD+ E ++ LL E
Sbjct: 116 PA----RNQINWNGLCFKSYASVAEAVAVSQTDLVEENSVNVSVADEVQE------LLNE 165
Query: 3180 LRSQERRQSSAKRRRQFRIACGMSHKKYRTLKRRQVKIETEAWEQAANEYTELLQDMCRH 3001
+R +ERRQ R RQ R GM +++Y+ L+RRQVKIETEAW QAA EY ELL DMC
Sbjct: 166 VRKEERRQYWT-RWRQRRSVRGMGNERYKALRRRQVKIETEAWGQAAKEYRELLNDMCEQ 224
Query: 3000 KLAPNLPYMKSLFLGWFEPLRDRIVQEQDSFMQGETKTTCAMYFNLLPAEKMAVITMHKL 2821
KLAPNLPYMKSLFLGWFEPLR++I +EQ+ +G++K A YF+LLPA+ MAVITMHKL
Sbjct: 225 KLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDLLPADMMAVITMHKL 284
Query: 2820 TSLLMSGTDHHYGNTRFVNAACLIGDAIEQEVRIHNLLEQTXXXXXXKADGIILEEDQSS 2641
LLM+G +H G R V AAC+IGDAIEQEVRI LE+T K E ++
Sbjct: 285 MGLLMTGGEH--GCARVVQAACIIGDAIEQEVRIQYFLEKTKKKKVQK--NTEKEGEEFD 340
Query: 2640 EDAQDKEKLKRTVTNLMKKQKLRAVNQILKRRDDSKPWGAEAKAKVGSRLIELLLQTAYI 2461
+ Q++EKL + VT L+KKQKL+AV Q++ R+ + +PWG +AKAKVGS LIEL+LQTAYI
Sbjct: 341 GNNQEQEKLHQRVTMLIKKQKLQAVRQLVNRQIEYQPWGQDAKAKVGSHLIELILQTAYI 400
Query: 2460 QQ-ADQTHDGSPDIRPAFVHTVKTLIKESKFASRRYGVIQCDPQILKGLEKTARHMVIPY 2284
Q A+Q+ +G PDIRPAFVHT++T+ KE+K +S+RYGVIQCDP + KGLE+TARHMVIPY
Sbjct: 401 QPPANQSTEGPPDIRPAFVHTMRTVTKETKTSSKRYGVIQCDPLVRKGLERTARHMVIPY 460
Query: 2283 MPMLIPPFKWTGYEEGAHIFLPSYVMRTHGSRQQRDVIRRTPRKQLEMVFEALDTLGSTK 2104
MPML+PP KWTGY++GA+++LPSYVMRTHG+RQQR+ ++R P +QL+ VFEALDTLGST+
Sbjct: 461 MPMLVPPVKWTGYDKGAYLYLPSYVMRTHGARQQRESVKRAPTEQLKPVFEALDTLGSTR 520
Query: 2103 WRINKRVLNIIDRIWASGGRLADLVDREDIPLPEEPDTDDENQLKKWRWKVNSVKKENSE 1924
WR+NKRVL+IIDRIWASGG L DLVDR DIPLPE PDT+DE LKKW+WKV S+KKENSE
Sbjct: 521 WRVNKRVLSIIDRIWASGGCLGDLVDRSDIPLPERPDTEDEALLKKWKWKVKSIKKENSE 580
Query: 1923 RYSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDVCRGILEFAEG 1744
R+S RCD ELKLAVARKMK+EEGF+YPHNLDFRGRAYPMHPHLNHLGSD+CRGILEF+EG
Sbjct: 581 RHSIRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEG 640
Query: 1743 HRLGTSGLRWLKIHLANLYANGVDKLSSEGRIAFTESHLDEIFDSTDRPLEGQRWWLNAE 1564
LG SGLRWLKIHLANL+ANGVDKLS EGR+AFTE+HLD+I DS DRPLEG+RWWLNAE
Sbjct: 641 RPLGKSGLRWLKIHLANLFANGVDKLSHEGRLAFTENHLDDIIDSADRPLEGKRWWLNAE 700
Query: 1563 DPFQCLAVCFNLTEALRSPSPETTISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 1384
DPFQCLA C NL EALRSPSPETTISHIP+HQDGSCNGLQHYAALGRDKLGAAAVNLVAG
Sbjct: 701 DPFQCLAACINLAEALRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 760
Query: 1383 EKPADVYSGIATRVLEIMKRDAQKDPAVFPDALRARVLINHVDRKLVKQTVMTSVYGVTY 1204
EKPADVYSGIA RVL+IMK DAQKDPAVFPDALRAR+LIN VDRKLVKQTVMTSVYGVTY
Sbjct: 761 EKPADVYSGIAARVLKIMKDDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTY 820
Query: 1203 IGARDQIKRRLKERDAIADESELFGASCYAAKITLTALGEMFEAARDIMNWLGECAKIIA 1024
IGARDQIKRRLKER AIAD++ELFGA+CYAAKITLTALG+MFEAAR IM WLGECAKIIA
Sbjct: 821 IGARDQIKRRLKERGAIADDAELFGAACYAAKITLTALGQMFEAARSIMTWLGECAKIIA 880
Query: 1023 SENEPVRWTTPLGLPVVQPYRQIARSLVRTSLQILTLTRETDKVMVKRQRTAFPPNFVHS 844
SENEPV WTTPLGLPVVQPYR++ R L++TSLQ+LTL RE++KVMVKRQRTAFPPNFVHS
Sbjct: 881 SENEPVCWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQRESEKVMVKRQRTAFPPNFVHS 940
Query: 843 LDGCHMMMTALACKKAGMNFAGVHDSYWTHACDVDELNRILREKFVELYETPVLENLLEG 664
LDG HMMMTA+ACKKAG+NFAGVHDSYWTHACDVDE+NRILREKFVELYE P+LENLLEG
Sbjct: 941 LDGSHMMMTAIACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLEG 1000
Query: 663 FQKXXXXXXXXXXPERGDFDLNDVLTSTYFFN 568
FQ+ P+RGDFDL +VL S YFFN
Sbjct: 1001 FQQSFPSLTFPPLPDRGDFDLKEVLQSPYFFN 1032
>XP_019185406.1 PREDICTED: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial-like [Ipomoea nil]
Length = 1034
Score = 1399 bits (3620), Expect = 0.0
Identities = 712/1050 (67%), Positives = 828/1050 (78%), Gaps = 3/1050 (0%)
Frame = -1
Query: 3708 INFSLKIEPFVHPLDKPLKNLSKPPQNSPIMWRNIAKQVSSRTLSSKLFCLNNKINY--L 3535
I+ S+K + F+ DKP SP MWRNIAKQ+SS+ L LN K Y
Sbjct: 8 ISVSVKFDRFI---DKPSAKALNLCSYSPAMWRNIAKQISSKALQKHNLSLNPKSRYNRT 64
Query: 3534 SSFYSSKRFSGLSQDLIFIHSFKCRPQDFCSYVLDSEYPKKGLRNFCQFSSNDEFFSRPK 3355
SSF S + S + L+ F P CS +E+ G R F +F DEF SRP
Sbjct: 65 SSFLSFPQGSNFPEKLVQFSPFDPVP---CSNNGSTEF---GFRKFGEFLPRDEFLSRPV 118
Query: 3354 LYNLKNDIKNYGLCPKRYASVAEAVEVSNTDVDEVGVLHXXXXXXXXXXXXXXELLKELR 3175
L++L + G K YASVAEAVEV +++ +E ELL E+R
Sbjct: 119 LHSLMSSGYISGFSWKSYASVAEAVEVLSSEAEE----------NVSVTDEVEELLTEMR 168
Query: 3174 SQERRQSSAKRRRQFRIACGMSHKKYRTLKRRQVKIETEAWEQAANEYTELLQDMCRHKL 2995
+ER+Q + R++ R++ GM KY+ LKRRQ+KIETEAWE+AA EY ELL+DMC KL
Sbjct: 169 REERKQFYCEWRKRQRVSRGMGRWKYQALKRRQIKIETEAWEKAAKEYKELLEDMCAQKL 228
Query: 2994 APNLPYMKSLFLGWFEPLRDRIVQEQDSFMQGETKTTCAMYFNLLPAEKMAVITMHKLTS 2815
APNLPYMKSLFLGWFEPL ++I +E + ++ G+TK T YF+ LPA+ MAVITMHKL
Sbjct: 229 APNLPYMKSLFLGWFEPLHNKIAEEHELYLAGKTKATYFKYFSQLPADMMAVITMHKLMG 288
Query: 2814 LLMSGTDHHYGNTRFVNAACLIGDAIEQEVRIHNLLEQTXXXXXXKADGIILEEDQSSED 2635
LLM+G + +G + V+ AC IGDAIEQEVRI+ +LE+T K D + ED
Sbjct: 289 LLMAGGE--FGAGKVVHIACAIGDAIEQEVRIYKILEKTRQSKINK-DAKMEGEDHEGV- 344
Query: 2634 AQDKEKLKRTVTNLMKKQKLRAVNQILKRRDDSKPWGAEAKAKVGSRLIELLLQTAYIQQ 2455
+ KEKLK+ V NL+KKQ LRAV +I+ +D KPWG +AKAKVGS LIEL+LQTAYIQ
Sbjct: 345 TEGKEKLKKKVANLIKKQNLRAVRRIVGGQDAFKPWGQDAKAKVGSHLIELVLQTAYIQP 404
Query: 2454 -ADQTHDGSPDIRPAFVHTVKTLIKESKFASRRYGVIQCDPQILKGLEKTARHMVIPYMP 2278
ADQ DG PD+RPAF+HT +T+ ++K SRRYGVIQCDP +LKGLEKTARHMVIPYMP
Sbjct: 405 PADQFADGPPDVRPAFIHTFRTVTNQAKGGSRRYGVIQCDPLVLKGLEKTARHMVIPYMP 464
Query: 2277 MLIPPFKWTGYEEGAHIFLPSYVMRTHGSRQQRDVIRRTPRKQLEMVFEALDTLGSTKWR 2098
ML+PP KW GY++GAH++LPSY+MRTHG+RQQR+ ++R PRKQLE VFEALDTLGST+WR
Sbjct: 465 MLVPPIKWKGYDKGAHLYLPSYIMRTHGARQQREAVKRAPRKQLEPVFEALDTLGSTRWR 524
Query: 2097 INKRVLNIIDRIWASGGRLADLVDREDIPLPEEPDTDDENQLKKWRWKVNSVKKENSERY 1918
INKRVL+++DRIWASGGRLADLVDR+DIPLPEEPDT+DE LKKW+WKV +VKKEN ER+
Sbjct: 525 INKRVLSVVDRIWASGGRLADLVDRDDIPLPEEPDTEDETVLKKWKWKVKAVKKENRERH 584
Query: 1917 SQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDVCRGILEFAEGHR 1738
SQRCDIELKLAVA MKDEEGF+YPHNLDFRGRAYPMHPHLNHLGSD+CRGILEFAEG
Sbjct: 585 SQRCDIELKLAVAHNMKDEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFAEGRP 644
Query: 1737 LGTSGLRWLKIHLANLYANGVDKLSSEGRIAFTESHLDEIFDSTDRPLEGQRWWLNAEDP 1558
LG SGL WLKIHLANLYA GV+KLS EGR+AFTE+HLD+IFDS DRPLEG+RWWL AEDP
Sbjct: 645 LGKSGLCWLKIHLANLYAAGVEKLSLEGRLAFTENHLDDIFDSADRPLEGKRWWLKAEDP 704
Query: 1557 FQCLAVCFNLTEALRSPSPETTISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEK 1378
FQ LAVC NL+EALRS SPE TISH+P+HQDGSCNGLQHYAALGRDKLGA +VNLVAGEK
Sbjct: 705 FQLLAVCINLSEALRSSSPEMTISHVPVHQDGSCNGLQHYAALGRDKLGAVSVNLVAGEK 764
Query: 1377 PADVYSGIATRVLEIMKRDAQKDPAVFPDALRARVLINHVDRKLVKQTVMTSVYGVTYIG 1198
PADVYSGIA RVL+IMKRDAQ+DPA FPDALRARVL++ VDRKLVKQTVMTSVYGVTYIG
Sbjct: 765 PADVYSGIAARVLDIMKRDAQRDPAEFPDALRARVLVDQVDRKLVKQTVMTSVYGVTYIG 824
Query: 1197 ARDQIKRRLKERDAIADESELFGASCYAAKITLTALGEMFEAARDIMNWLGECAKIIASE 1018
ARDQIKRRLKER AI D+SELFGA+CY AK+TLTALGEMF+AAR IM+WLGECAK+IASE
Sbjct: 825 ARDQIKRRLKERGAIDDDSELFGAACYGAKVTLTALGEMFQAARSIMSWLGECAKVIASE 884
Query: 1017 NEPVRWTTPLGLPVVQPYRQIARSLVRTSLQILTLTRETDKVMVKRQRTAFPPNFVHSLD 838
N PVRWTTPLGLPVVQPYR+I R LV+TSLQ+LTL RET+KVMVKRQRTAFPPNFVHSLD
Sbjct: 885 NHPVRWTTPLGLPVVQPYRKIGRHLVKTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLD 944
Query: 837 GCHMMMTALACKKAGMNFAGVHDSYWTHACDVDELNRILREKFVELYETPVLENLLEGFQ 658
G HMMMTA+ACK+AG+ FAGVHDSYWTHACDVDE+NRILR+KFVELYE P+LENLLE F+
Sbjct: 945 GSHMMMTAVACKRAGLRFAGVHDSYWTHACDVDEMNRILRDKFVELYEKPILENLLESFE 1004
Query: 657 KXXXXXXXXXXPERGDFDLNDVLTSTYFFN 568
+ PERGDFDL DVL STYFFN
Sbjct: 1005 QSFPMLSFPPLPERGDFDLKDVLESTYFFN 1034
>XP_010660553.1 PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
[Vitis vinifera] CBI16911.3 unnamed protein product,
partial [Vitis vinifera]
Length = 1035
Score = 1397 bits (3617), Expect = 0.0
Identities = 709/1039 (68%), Positives = 821/1039 (79%), Gaps = 6/1039 (0%)
Frame = -1
Query: 3666 DKPLKNLSKPPQNSPIMWRNIAKQVSSRTLSSKLFCLNNKINYLSSFYSSKRFS--GLSQ 3493
+KP P + +MWRNIAK+ R K YL S S+R+S G SQ
Sbjct: 24 EKPTNFRPNPLKKPTVMWRNIAKRAIPRA--------PRKCVYLDSQPLSRRYSFLGFSQ 75
Query: 3492 DLIF--IHSFKCRPQDFCSYVLDSEYPKKGLRNFCQFSSNDEFFSRPKLYNLKNDIKNYG 3319
DLIF I F CS S + + G R + SS ++ RP L+N + G
Sbjct: 76 DLIFPEIMKFGTFEPSSCS---SSGFSEMGFRRIGEISSREDAVGRPSFGCLRNQMGFSG 132
Query: 3318 LCPKRYASVAEAVEVSNTDVDEVGVLHXXXXXXXXXXXXXXELLKELRSQERRQSSAKRR 3139
CPK YASVAEAV S+TDV+E ELL E++ +E+RQ + KRR
Sbjct: 133 FCPKSYASVAEAV--SSTDVEE----------DVSASDEIQELLGEMKKEEKRQVNFKRR 180
Query: 3138 RQFRIACGMSHKKYRTLKRRQVKIETEAWEQAANEYTELLQDMCRHKLAPNLPYMKSLFL 2959
+ ++ GM +Y L+RRQVKIETEAWE AA EY ELL DMC KLAPNLPYMKSLFL
Sbjct: 181 EKLKMERGMEQGRYLRLRRRQVKIETEAWELAAKEYKELLMDMCEQKLAPNLPYMKSLFL 240
Query: 2958 GWFEPLRDRIVQEQDSFMQGETKTTCAMYFNLLPAEKMAVITMHKLTSLLMSGTDHHYGN 2779
GWFEPLRD IV+EQ+ G+ K A YF+ LPA+ M+VITMHKL LLM+G +H G+
Sbjct: 241 GWFEPLRDAIVKEQELCRLGKNKAAYAPYFDQLPADMMSVITMHKLVGLLMTGGEH--GS 298
Query: 2778 TRFVNAACLIGDAIEQEVRIHNLLEQTXXXXXXKADGIILEEDQSSEDAQDKEKLKRTVT 2599
TR V AAC+IGDAIEQEVRIHN LE+T K + E ++EKL++ VT
Sbjct: 299 TRVVQAACVIGDAIEQEVRIHNFLEKTKRKKVGKDKNV--EGGGFDPVIHEQEKLRKKVT 356
Query: 2598 NLMKKQKLRAVNQILKRRDDSKPWGAEAKAKVGSRLIELLLQTAYIQQA--DQTHDGSPD 2425
NLMKKQKL A QI+K D+SKPWG EAKAKVGSRLIELL+QTAYIQ +Q D PD
Sbjct: 357 NLMKKQKLHAARQIVKGHDNSKPWGPEAKAKVGSRLIELLMQTAYIQPPVDNQLADTPPD 416
Query: 2424 IRPAFVHTVKTLIKESKFASRRYGVIQCDPQILKGLEKTARHMVIPYMPMLIPPFKWTGY 2245
IRPAFVHT KT+++E+K RR+GVI+CDP + KGLE+TARHMVIPY+PML+PP KWTGY
Sbjct: 417 IRPAFVHTFKTVMREAKKIGRRFGVIECDPLVKKGLERTARHMVIPYVPMLVPPLKWTGY 476
Query: 2244 EEGAHIFLPSYVMRTHGSRQQRDVIRRTPRKQLEMVFEALDTLGSTKWRINKRVLNIIDR 2065
++GAH+FLPSYVMRTHG+RQQR+ ++R PR QLE VFEAL+TLG+TKWRINKR+ +++DR
Sbjct: 477 DKGAHLFLPSYVMRTHGARQQREAVKRAPRNQLEPVFEALNTLGNTKWRINKRLFDVVDR 536
Query: 2064 IWASGGRLADLVDREDIPLPEEPDTDDENQLKKWRWKVNSVKKENSERYSQRCDIELKLA 1885
IWA GG LADLVDR D+PLPE+PDT+DE QL+KW+WKV SVKK NSER+SQRCDIELKLA
Sbjct: 537 IWAGGGCLADLVDRNDVPLPEKPDTEDEAQLRKWKWKVKSVKKANSERHSQRCDIELKLA 596
Query: 1884 VARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDVCRGILEFAEGHRLGTSGLRWLKI 1705
VARKMKDE+GF+YPHNLDFRGRAYPMHP+LNHLGSD+CRGILEFAEG LG+SGL WLKI
Sbjct: 597 VARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGSSGLHWLKI 656
Query: 1704 HLANLYANGVDKLSSEGRIAFTESHLDEIFDSTDRPLEGQRWWLNAEDPFQCLAVCFNLT 1525
HLANL+A GVDKLS EGRI FTE+HLD+IFDS DRPLEG+RWWLNAEDPFQ LA C NL+
Sbjct: 657 HLANLFAGGVDKLSHEGRITFTENHLDDIFDSADRPLEGKRWWLNAEDPFQFLAACINLS 716
Query: 1524 EALRSPSPETTISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIATR 1345
EALRS SPETTISHIP+HQDGSCNGLQHYAALGRD+LGA AVNLVAGEKPADVYSGIA R
Sbjct: 717 EALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDQLGATAVNLVAGEKPADVYSGIAAR 776
Query: 1344 VLEIMKRDAQKDPAVFPDALRARVLINHVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE 1165
VL+IMKRDA+KDPA+FPDALRAR+LIN VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE
Sbjct: 777 VLDIMKRDAEKDPAIFPDALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE 836
Query: 1164 RDAIADESELFGASCYAAKITLTALGEMFEAARDIMNWLGECAKIIASENEPVRWTTPLG 985
R+AIAD+ ELFGA+CYAAKITLTALGEMF+AAR IM+WLG+CAKIIASEN+PVRWTTPLG
Sbjct: 837 RNAIADDVELFGAACYAAKITLTALGEMFQAARSIMSWLGDCAKIIASENQPVRWTTPLG 896
Query: 984 LPVVQPYRQIARSLVRTSLQILTLTRETDKVMVKRQRTAFPPNFVHSLDGCHMMMTALAC 805
LPVVQPYR++ R L++TSLQ+LTL RET+ +MVKRQRTAFPPNFVHSLDG HMMMTA+AC
Sbjct: 897 LPVVQPYRKLGRHLIKTSLQVLTLQRETETIMVKRQRTAFPPNFVHSLDGSHMMMTAIAC 956
Query: 804 KKAGMNFAGVHDSYWTHACDVDELNRILREKFVELYETPVLENLLEGFQKXXXXXXXXXX 625
KKAG+NFAGVHDSYWTHACDVDE+NR+LREKFV+LYETP+LENLLE FQ+
Sbjct: 957 KKAGLNFAGVHDSYWTHACDVDEMNRLLREKFVQLYETPILENLLESFQQSFPALEFPPL 1016
Query: 624 PERGDFDLNDVLTSTYFFN 568
PERGDFDL +VL S YFFN
Sbjct: 1017 PERGDFDLREVLESPYFFN 1035
>XP_017975629.1 PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
isoform X2 [Theobroma cacao]
Length = 1032
Score = 1392 bits (3602), Expect = 0.0
Identities = 709/1057 (67%), Positives = 825/1057 (78%), Gaps = 4/1057 (0%)
Frame = -1
Query: 3726 ENLMSSINFSLKIEPFVHPLDK--PLKNLSKPPQNSPIMWRNIAKQVSSRTLSSKLFCLN 3553
E + S N K + FV PLD P PP+ S +MWRNIAK SR S
Sbjct: 5 ETPLISSNLLDKFDHFV-PLDNRNPSILYQNPPKISIVMWRNIAKHAISRRTHS------ 57
Query: 3552 NKINYLSSFYSSKRFSGLSQDLIFIHSFKCRPQDFCSYVLDSEYPKKGLRNFCQFSSNDE 3373
F + F G SQD IF K R F S+ +S + G R + +N E
Sbjct: 58 -----FQCFARTYSFLGTSQDSIFHEKSKFRGLKFGSFCSNSRFLDMGGRRIGEVLTNVE 112
Query: 3372 FFSRPKLYNLKNDIKNYGLCPKRYASVAEAVEVSNTDVDE-VGVLHXXXXXXXXXXXXXX 3196
+ + +N+I GLCP+ Y SVAEAV S+TDV+E V V+
Sbjct: 113 YIGKQSFGFPRNEIGCSGLCPRGYVSVAEAV--SSTDVEEDVSVVEEIKE---------- 160
Query: 3195 ELLKELRSQERRQSSAKRRRQFRIACGMSHKKYRTLKRRQVKIETEAWEQAANEYTELLQ 3016
LL E++ ++RR++ +RRR I GM KYR L+RRQVKIETEAWEQAA EY ELL
Sbjct: 161 -LLDEMKKEQRRETGNRRRRCQIIERGMGESKYRFLRRRQVKIETEAWEQAAKEYRELLM 219
Query: 3015 DMCRHKLAPNLPYMKSLFLGWFEPLRDRIVQEQDSFMQGETKTTCAMYFNLLPAEKMAVI 2836
DMC HKLAPNLPY+KSLFLGWFEPLRD I++EQ+ + G+ + A Y + LPA+ AVI
Sbjct: 220 DMCEHKLAPNLPYIKSLFLGWFEPLRDAIIKEQELYRLGKLRAGYAGYLDQLPADMTAVI 279
Query: 2835 TMHKLTSLLMSGTDHHYGNTRFVNAACLIGDAIEQEVRIHNLLEQTXXXXXXKADGIILE 2656
TMHKL LLM+G +H G R V AACLIGDAIEQEVRIH LE+T K + E
Sbjct: 280 TMHKLMGLLMTGGEH--GCARVVQAACLIGDAIEQEVRIHKFLEKTKKKRVDKKNED--E 335
Query: 2655 EDQSSEDAQDKEKLKRTVTNLMKKQKLRAVNQILKRRDDSKPWGAEAKAKVGSRLIELLL 2476
D+ + + +++EKL++ VT+L+KKQKL AV QI+K +DD+KPWG +AKAKVGS LIELL+
Sbjct: 336 GDKPNAEIKEQEKLRKKVTDLIKKQKLPAVRQIVKGQDDTKPWGQDAKAKVGSHLIELLM 395
Query: 2475 QTAYIQQ-ADQTHDGSPDIRPAFVHTVKTLIKESKFASRRYGVIQCDPQILKGLEKTARH 2299
QTAYIQ ADQ D PD+RPAFVH+++T++KE+K RRYGVI+C+P + KGLE+TARH
Sbjct: 396 QTAYIQPPADQLADCPPDVRPAFVHSLRTVVKENKKTGRRYGVIECNPLVRKGLERTARH 455
Query: 2298 MVIPYMPMLIPPFKWTGYEEGAHIFLPSYVMRTHGSRQQRDVIRRTPRKQLEMVFEALDT 2119
MVIPYMPML+PP KWTGY+ GA++F+PSY+MRTHG +QQR+ ++RTPRKQLE VFEALDT
Sbjct: 456 MVIPYMPMLVPPVKWTGYDRGAYLFIPSYIMRTHGVKQQREAVKRTPRKQLEPVFEALDT 515
Query: 2118 LGSTKWRINKRVLNIIDRIWASGGRLADLVDREDIPLPEEPDTDDENQLKKWRWKVNSVK 1939
LG TKWR+NKRVLN++DRIW SGGRLADLVDR+D+PLPE+PD++DE L+KW+WKV SVK
Sbjct: 516 LGCTKWRVNKRVLNVVDRIWTSGGRLADLVDRKDVPLPEKPDSEDEAVLRKWKWKVRSVK 575
Query: 1938 KENSERYSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDVCRGIL 1759
KEN ER+S RCD+ELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHP+LNHLGSD+CRGIL
Sbjct: 576 KENRERHSLRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGIL 635
Query: 1758 EFAEGHRLGTSGLRWLKIHLANLYANGVDKLSSEGRIAFTESHLDEIFDSTDRPLEGQRW 1579
EF EG LG SGLRWLKIHLANLYA GVDKLS EGR+AFTE+HLD+IFDS DRPLEG+RW
Sbjct: 636 EFGEGRPLGKSGLRWLKIHLANLYAGGVDKLSHEGRLAFTENHLDDIFDSADRPLEGKRW 695
Query: 1578 WLNAEDPFQCLAVCFNLTEALRSPSPETTISHIPIHQDGSCNGLQHYAALGRDKLGAAAV 1399
WL AEDPFQCLAVC NL EALRS SPET +SHIP+HQDGSCNGLQHYAALGRDKLGAA+V
Sbjct: 696 WLKAEDPFQCLAVCINLAEALRSSSPETFVSHIPVHQDGSCNGLQHYAALGRDKLGAASV 755
Query: 1398 NLVAGEKPADVYSGIATRVLEIMKRDAQKDPAVFPDALRARVLINHVDRKLVKQTVMTSV 1219
NLVAGEKPADVYSGIA RVL+I++RDAQKDPAVFPDAL A+VL+N VDRKLVKQTVMTSV
Sbjct: 756 NLVAGEKPADVYSGIAARVLDIIRRDAQKDPAVFPDALHAKVLVNQVDRKLVKQTVMTSV 815
Query: 1218 YGVTYIGARDQIKRRLKERDAIADESELFGASCYAAKITLTALGEMFEAARDIMNWLGEC 1039
YGVTYIGARDQIKRRLKER I D+ E+FGASCYAAK TLTALGEMF+AAR IMNWLGEC
Sbjct: 816 YGVTYIGARDQIKRRLKERGVITDDKEIFGASCYAAKTTLTALGEMFQAARAIMNWLGEC 875
Query: 1038 AKIIASENEPVRWTTPLGLPVVQPYRQIARSLVRTSLQILTLTRETDKVMVKRQRTAFPP 859
AKIIASEN+PVRWTTPLGLPVVQPYR + R L++TSLQ+LTL RET+KVMVKRQRTAFPP
Sbjct: 876 AKIIASENQPVRWTTPLGLPVVQPYRVLGRHLIKTSLQVLTLQRETEKVMVKRQRTAFPP 935
Query: 858 NFVHSLDGCHMMMTALACKKAGMNFAGVHDSYWTHACDVDELNRILREKFVELYETPVLE 679
NFVHSLDG HMMMTA+ACKKAG+ FAGVHDSYWTHA DVD++NRILRE FVELYE P+LE
Sbjct: 936 NFVHSLDGSHMMMTAVACKKAGLTFAGVHDSYWTHASDVDKMNRILRENFVELYEVPILE 995
Query: 678 NLLEGFQKXXXXXXXXXXPERGDFDLNDVLTSTYFFN 568
NLLE FQ+ PERGDFDL DVL S YFFN
Sbjct: 996 NLLESFQQSFPTLCFPPLPERGDFDLRDVLESPYFFN 1032
>XP_018816698.1 PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
isoform X1 [Juglans regia]
Length = 999
Score = 1390 bits (3598), Expect = 0.0
Identities = 706/1027 (68%), Positives = 817/1027 (79%), Gaps = 10/1027 (0%)
Frame = -1
Query: 3618 MWRNIAKQVSSRTLSSKLFCLNNKINYLSSFYSSKRFSGLSQDLIFIHSFKCRPQDFCSY 3439
MW NIAK+ S++ S F LN+ S F G +QD IF F+ RP + +
Sbjct: 1 MWSNIAKRAISKSQS---FVLNSH-----SLRRVHSFLGRTQDPIFPEEFRYRPSEL-NA 51
Query: 3438 VLDSEYPKKGLRNFCQFSSNDEFFSRPKLYNLKNDIKNYGLCPKRYASVAEAVEVSNTDV 3259
D+ + + G +F S+++F RP + + G CP+ YAS+AEA VS+TDV
Sbjct: 52 CWDNGFSEMGYHRHDEFFSHEDFMRRPS-FGIS------GFCPRGYASLAEAEVVSSTDV 104
Query: 3258 DEVGVLHXXXXXXXXXXXXXXELLKELRSQERRQSSAKRRRQFRIACGMSHKKYRTLKRR 3079
+E ELL+E+ +E+RQ +RRRQ ++A GM KY L+RR
Sbjct: 105 EE----------DVSVAEEVQELLQEMSKEEKRQVDYRRRRQQKMARGMGQGKYHLLRRR 154
Query: 3078 QVKIETEAWEQAANEYTELLQDMCRHKLAPNLPYMKSLFLGWFEPLRDRIVQEQDSFMQG 2899
QVKIETEAWEQAA EY ELL MC KLAPNLPYMKSLFLGWFEPLRD I +EQ G
Sbjct: 155 QVKIETEAWEQAAKEYKELLMVMCAQKLAPNLPYMKSLFLGWFEPLRDAIEKEQQLCRNG 214
Query: 2898 ETKTTCAMYFNLLPAEKMAVITMHKLTSLLMSGTDHHYGNTRFVNAACLIGDAIEQEVRI 2719
+ K A YF LPA+ M+VITMHKLT LLM+G +H G R V AAC+IGDAIEQEVRI
Sbjct: 215 KNKRAYAPYFEQLPADMMSVITMHKLTGLLMTGGEH--GAARVVQAACMIGDAIEQEVRI 272
Query: 2718 HNLLEQTXXXXXXK--------ADGIILEEDQSS-EDAQDKEKLKRTVTNLMKKQKLRAV 2566
H LE+T + ++ +I E+++ + ++E+L++ VTNLMKKQKL AV
Sbjct: 273 HKFLEKTKQKKGNEDKENEGGDSNSLIKEQEELLIKKKGEQEELRKKVTNLMKKQKLVAV 332
Query: 2565 NQILKRRDDSKPWGAEAKAKVGSRLIELLLQTAYIQQ-ADQTHDGSPDIRPAFVHTVKTL 2389
QI+K +DDSKPWG +AKAKVGSRLIELL+QTAYIQ A+Q DG PDIRPAFVH+ +T+
Sbjct: 333 RQIVKGKDDSKPWGQDAKAKVGSRLIELLMQTAYIQPPANQLADGPPDIRPAFVHSFRTV 392
Query: 2388 IKESKFASRRYGVIQCDPQILKGLEKTARHMVIPYMPMLIPPFKWTGYEEGAHIFLPSYV 2209
+KE K SRRYG+I+C+P +LKGLE+T RHMVIPYMPML+PP KWTGY++G H+FLPSY+
Sbjct: 393 MKEGKKRSRRYGIIECNPLVLKGLERTVRHMVIPYMPMLVPPVKWTGYDKGGHLFLPSYI 452
Query: 2208 MRTHGSRQQRDVIRRTPRKQLEMVFEALDTLGSTKWRINKRVLNIIDRIWASGGRLADLV 2029
MRTHGSR QR+ ++R PRKQLE VFEAL+TLG TKWRINKRVL+I+DRIWASGG LADLV
Sbjct: 453 MRTHGSRHQREAVKRAPRKQLEPVFEALNTLGYTKWRINKRVLSIVDRIWASGGHLADLV 512
Query: 2028 DREDIPLPEEPDTDDENQLKKWRWKVNSVKKENSERYSQRCDIELKLAVARKMKDEEGFY 1849
DR D+PLP EPDT+DE QLKKW+W+V S+KKEN ER+SQRCDIELKLAVARKMKDEEGF+
Sbjct: 513 DRNDVPLPNEPDTEDEAQLKKWKWRVKSLKKENRERHSQRCDIELKLAVARKMKDEEGFF 572
Query: 1848 YPHNLDFRGRAYPMHPHLNHLGSDVCRGILEFAEGHRLGTSGLRWLKIHLANLYANGVDK 1669
YPHNLDFRGRAYPMHP+LNHLGSD+CRGILEFA G LG SGLRWLKIHLANLYA GVDK
Sbjct: 573 YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAAGRPLGKSGLRWLKIHLANLYAGGVDK 632
Query: 1668 LSSEGRIAFTESHLDEIFDSTDRPLEGQRWWLNAEDPFQCLAVCFNLTEALRSPSPETTI 1489
LS EGRIAFTE+HLD+IFDSTDRPLEG+RWWLNAEDPFQ LAVC N+T+ALRS SPET +
Sbjct: 633 LSHEGRIAFTENHLDDIFDSTDRPLEGKRWWLNAEDPFQFLAVCMNITDALRSSSPETFV 692
Query: 1488 SHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIATRVLEIMKRDAQKD 1309
SHIP+HQDGSCNGLQHYAALGRDKLGA AVNLVAGEKPADVYSGIA RVLEIM++DAQKD
Sbjct: 693 SHIPVHQDGSCNGLQHYAALGRDKLGAVAVNLVAGEKPADVYSGIAVRVLEIMRKDAQKD 752
Query: 1308 PAVFPDALRARVLINHVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDAIADESELFG 1129
P VFPDAL AR+LIN VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER AIAD++ELFG
Sbjct: 753 PTVFPDALHARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDAELFG 812
Query: 1128 ASCYAAKITLTALGEMFEAARDIMNWLGECAKIIASENEPVRWTTPLGLPVVQPYRQIAR 949
ASCYAAK TLTALGEMFEAAR IM+WLGECAKIIASEN+ V+WTTPLGLPVVQPYR + R
Sbjct: 813 ASCYAAKTTLTALGEMFEAARSIMSWLGECAKIIASENQTVQWTTPLGLPVVQPYRNLGR 872
Query: 948 SLVRTSLQILTLTRETDKVMVKRQRTAFPPNFVHSLDGCHMMMTALACKKAGMNFAGVHD 769
L++TSLQIL+L RET+KVMVKRQRTAFPPNF+HSLDG HMM TA+ACKKAG+NFAGVHD
Sbjct: 873 HLIKTSLQILSLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMKTAIACKKAGLNFAGVHD 932
Query: 768 SYWTHACDVDELNRILREKFVELYETPVLENLLEGFQKXXXXXXXXXXPERGDFDLNDVL 589
SYWTHACDVDE++RILREKFVELYETP+LENLLE FQ+ PERGDFDL DVL
Sbjct: 933 SYWTHACDVDEMSRILREKFVELYETPILENLLESFQQSFPTLSFPSLPERGDFDLRDVL 992
Query: 588 TSTYFFN 568
S YFFN
Sbjct: 993 ESPYFFN 999
>XP_017975628.1 PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
isoform X1 [Theobroma cacao]
Length = 1033
Score = 1387 bits (3590), Expect = 0.0
Identities = 709/1058 (67%), Positives = 825/1058 (77%), Gaps = 5/1058 (0%)
Frame = -1
Query: 3726 ENLMSSINFSLKIEPFVHPLDK--PLKNLSKPPQNSPIMWRNIAKQVSSRTLSSKLFCLN 3553
E + S N K + FV PLD P PP+ S +MWRNIAK SR S
Sbjct: 5 ETPLISSNLLDKFDHFV-PLDNRNPSILYQNPPKISIVMWRNIAKHAISRRTHS------ 57
Query: 3552 NKINYLSSFYSSKRFSGLSQDLIFIHSFKCRPQDFCSYVLDSEYPKKGLRNFCQFSSNDE 3373
F + F G SQD IF K R F S+ +S + G R + +N E
Sbjct: 58 -----FQCFARTYSFLGTSQDSIFHEKSKFRGLKFGSFCSNSRFLDMGGRRIGEVLTNVE 112
Query: 3372 FFSRPKLYNLKNDIKNYGLCPKRYASVAEAVEVSNTDVDE-VGVLHXXXXXXXXXXXXXX 3196
+ + +N+I GLCP+ Y SVAEAV S+TDV+E V V+
Sbjct: 113 YIGKQSFGFPRNEIGCSGLCPRGYVSVAEAV--SSTDVEEDVSVVEEIKE---------- 160
Query: 3195 ELLKELRSQERRQSSAKRRRQFRIACGMSHKKYRTLKRRQVKIETEAWEQAANEYTELLQ 3016
LL E++ ++RR++ +RRR I GM KYR L+RRQVKIETEAWEQAA EY ELL
Sbjct: 161 -LLDEMKKEQRRETGNRRRRCQIIERGMGESKYRFLRRRQVKIETEAWEQAAKEYRELLM 219
Query: 3015 DMCRHKLAPNLPYMKSLFLGWFEPLRDRIVQEQDSFMQGETKTTCAMYFNLLPAEKMAVI 2836
DMC HKLAPNLPY+KSLFLGWFEPLRD I++EQ+ + G+ + A Y + LPA+ AVI
Sbjct: 220 DMCEHKLAPNLPYIKSLFLGWFEPLRDAIIKEQELYRLGKLRAGYAGYLDQLPADMTAVI 279
Query: 2835 TMHKLTSLLMSGTDHHYGNTRFVNAACLIGDAIEQEVRIHNLLEQTXXXXXXKADGIILE 2656
TMHKL LLM+G +H G R V AACLIGDAIEQEVRIH LE+T K + E
Sbjct: 280 TMHKLMGLLMTGGEH--GCARVVQAACLIGDAIEQEVRIHKFLEKTKKKRVDKKNED--E 335
Query: 2655 EDQSSEDAQDKEKLKRTVTNLMKKQKLRAVNQILKRRDDSKPWGAEAKAKVGSRLIELLL 2476
D+ + + +++EKL++ VT+L+KKQKL AV QI+K +DD+KPWG +AKAKVGS LIELL+
Sbjct: 336 GDKPNAEIKEQEKLRKKVTDLIKKQKLPAVRQIVKGQDDTKPWGQDAKAKVGSHLIELLM 395
Query: 2475 QTAYIQQ-ADQTHDGSPDIRPAFVHTVKTLIKESKFASRRYGVIQCDPQILKGLEKTARH 2299
QTAYIQ ADQ D PD+RPAFVH+++T++KE+K RRYGVI+C+P + KGLE+TARH
Sbjct: 396 QTAYIQPPADQLADCPPDVRPAFVHSLRTVVKENKKTGRRYGVIECNPLVRKGLERTARH 455
Query: 2298 MVIPYMPMLIPPFKWTGYEEGAHIFLPSYVMRTHGSRQQRDVIRRTPRKQLEMVFEALDT 2119
MVIPYMPML+PP KWTGY+ GA++F+PSY+MRTHG +QQR+ ++RTPRKQLE VFEALDT
Sbjct: 456 MVIPYMPMLVPPVKWTGYDRGAYLFIPSYIMRTHGVKQQREAVKRTPRKQLEPVFEALDT 515
Query: 2118 LGSTKWRINKRVLNIIDRIWASGGRLADLVDREDIPLPEEPDTDDENQLKKWRWKVNSVK 1939
LG TKWR+NKRVLN++DRIW SGGRLADLVDR+D+PLPE+PD++DE L+KW+WKV SVK
Sbjct: 516 LGCTKWRVNKRVLNVVDRIWTSGGRLADLVDRKDVPLPEKPDSEDEAVLRKWKWKVRSVK 575
Query: 1938 KENSERYSQRCDIELKLA-VARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDVCRGI 1762
KEN ER+S RCD+ELKLA VARKMKDEEGFYYPHNLDFRGRAYPMHP+LNHLGSD+CRGI
Sbjct: 576 KENRERHSLRCDVELKLAQVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGI 635
Query: 1761 LEFAEGHRLGTSGLRWLKIHLANLYANGVDKLSSEGRIAFTESHLDEIFDSTDRPLEGQR 1582
LEF EG LG SGLRWLKIHLANLYA GVDKLS EGR+AFTE+HLD+IFDS DRPLEG+R
Sbjct: 636 LEFGEGRPLGKSGLRWLKIHLANLYAGGVDKLSHEGRLAFTENHLDDIFDSADRPLEGKR 695
Query: 1581 WWLNAEDPFQCLAVCFNLTEALRSPSPETTISHIPIHQDGSCNGLQHYAALGRDKLGAAA 1402
WWL AEDPFQCLAVC NL EALRS SPET +SHIP+HQDGSCNGLQHYAALGRDKLGAA+
Sbjct: 696 WWLKAEDPFQCLAVCINLAEALRSSSPETFVSHIPVHQDGSCNGLQHYAALGRDKLGAAS 755
Query: 1401 VNLVAGEKPADVYSGIATRVLEIMKRDAQKDPAVFPDALRARVLINHVDRKLVKQTVMTS 1222
VNLVAGEKPADVYSGIA RVL+I++RDAQKDPAVFPDAL A+VL+N VDRKLVKQTVMTS
Sbjct: 756 VNLVAGEKPADVYSGIAARVLDIIRRDAQKDPAVFPDALHAKVLVNQVDRKLVKQTVMTS 815
Query: 1221 VYGVTYIGARDQIKRRLKERDAIADESELFGASCYAAKITLTALGEMFEAARDIMNWLGE 1042
VYGVTYIGARDQIKRRLKER I D+ E+FGASCYAAK TLTALGEMF+AAR IMNWLGE
Sbjct: 816 VYGVTYIGARDQIKRRLKERGVITDDKEIFGASCYAAKTTLTALGEMFQAARAIMNWLGE 875
Query: 1041 CAKIIASENEPVRWTTPLGLPVVQPYRQIARSLVRTSLQILTLTRETDKVMVKRQRTAFP 862
CAKIIASEN+PVRWTTPLGLPVVQPYR + R L++TSLQ+LTL RET+KVMVKRQRTAFP
Sbjct: 876 CAKIIASENQPVRWTTPLGLPVVQPYRVLGRHLIKTSLQVLTLQRETEKVMVKRQRTAFP 935
Query: 861 PNFVHSLDGCHMMMTALACKKAGMNFAGVHDSYWTHACDVDELNRILREKFVELYETPVL 682
PNFVHSLDG HMMMTA+ACKKAG+ FAGVHDSYWTHA DVD++NRILRE FVELYE P+L
Sbjct: 936 PNFVHSLDGSHMMMTAVACKKAGLTFAGVHDSYWTHASDVDKMNRILRENFVELYEVPIL 995
Query: 681 ENLLEGFQKXXXXXXXXXXPERGDFDLNDVLTSTYFFN 568
ENLLE FQ+ PERGDFDL DVL S YFFN
Sbjct: 996 ENLLESFQQSFPTLCFPPLPERGDFDLRDVLESPYFFN 1033
>XP_012835044.1 PREDICTED: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial [Erythranthe guttata]
EYU39350.1 hypothetical protein MIMGU_mgv1a000681mg
[Erythranthe guttata]
Length = 1021
Score = 1382 bits (3576), Expect = 0.0
Identities = 701/1037 (67%), Positives = 824/1037 (79%), Gaps = 6/1037 (0%)
Frame = -1
Query: 3660 PLKNLSKPPQNSPIMWRNIAKQVSSRTLSSKLFCLNNKINYLSSFYSSKRFSGLSQDLIF 3481
P N +S +MW++IAK++SS+TL ++ C N S+RF +QD +F
Sbjct: 20 PNHNPRSSSNSSTVMWKSIAKRISSKTLLNR--CPN-----------SRRFLAFAQDSVF 66
Query: 3480 IHSFKCRPQDFCSYVLDSEYPKKGLRNFCQFSSNDEFFSRPKLYNLKNDIKNYGLCPKRY 3301
FK R F + DS S++DEF +++ +N + GL K Y
Sbjct: 67 PDKFKLRKPLFDNSRSDSNI---------YTSTHDEFM----MFSSRNQMNVTGLSFKSY 113
Query: 3300 ASVAEAVEV--SNTDVDE---VGVLHXXXXXXXXXXXXXXELLKELRSQERRQSSAKRRR 3136
A+VAEAVEV S+TD ++ + ELL E+R +E+RQ RR
Sbjct: 114 ATVAEAVEVAGSHTDFEDDNNSNSNNNNINNSNNVDDEFQELLNEVRKEEKRQWRQNRRS 173
Query: 3135 QFRIACGMSHKKYRTLKRRQVKIETEAWEQAANEYTELLQDMCRHKLAPNLPYMKSLFLG 2956
GM ++K++ L+RRQVKIETEAWEQAA EY ELL DMC KLAPNLPYMKSLFLG
Sbjct: 174 ----GKGMGNEKFKALRRRQVKIETEAWEQAAKEYRELLNDMCEQKLAPNLPYMKSLFLG 229
Query: 2955 WFEPLRDRIVQEQDSFMQGETKTTCAMYFNLLPAEKMAVITMHKLTSLLMSGTDHHYGNT 2776
WFEPLR++I +EQ+ +G++K + A YF+LLPA+ MAVITMHKL +LLM+G +G
Sbjct: 230 WFEPLRNKIEEEQEFIRKGKSKASYANYFDLLPADMMAVITMHKLMALLMTG---EHGCA 286
Query: 2775 RFVNAACLIGDAIEQEVRIHNLLEQTXXXXXXKADGIILEEDQSSEDAQDKEKLKRTVTN 2596
R V AAC+IGDAIEQEVRIH LE+T E D+ E+ Q++ KL+ VTN
Sbjct: 287 RVVAAACVIGDAIEQEVRIHYFLEKTKKKKV--TKDAETEGDKPDENIQEQAKLREKVTN 344
Query: 2595 LMKKQKLRAVNQILKRRDDSKPWGAEAKAKVGSRLIELLLQTAYIQQ-ADQTHDGSPDIR 2419
LMKKQKLRAV QI+ R+ +S+ WG +AKAKVGSRLIEL++QTAYIQ A Q+ +G PDI+
Sbjct: 345 LMKKQKLRAVRQIVNRQIESQAWGQDAKAKVGSRLIELIIQTAYIQPPASQSAEGPPDIK 404
Query: 2418 PAFVHTVKTLIKESKFASRRYGVIQCDPQILKGLEKTARHMVIPYMPMLIPPFKWTGYEE 2239
PAF+HT KT+ KE K SRRYGVIQCDP + KGLE+TARHMVIPYMPML+PP KWTGY++
Sbjct: 405 PAFLHTFKTVAKEIKSNSRRYGVIQCDPLVRKGLERTARHMVIPYMPMLVPPVKWTGYDK 464
Query: 2238 GAHIFLPSYVMRTHGSRQQRDVIRRTPRKQLEMVFEALDTLGSTKWRINKRVLNIIDRIW 2059
GA+++LPSYVMRTHG+RQQRD ++R PR+QL+ VFEALDTLGSTKWR+NKRVL+IIDRIW
Sbjct: 465 GAYLYLPSYVMRTHGARQQRDTVKRAPREQLKPVFEALDTLGSTKWRVNKRVLSIIDRIW 524
Query: 2058 ASGGRLADLVDREDIPLPEEPDTDDENQLKKWRWKVNSVKKENSERYSQRCDIELKLAVA 1879
ASGGRL DLVDR+DI LPE+PDT+DE+ L+KW+WKV S+KKENSER+SQRCD ELKLAVA
Sbjct: 525 ASGGRLGDLVDRDDILLPEQPDTEDESLLQKWKWKVKSIKKENSERHSQRCDTELKLAVA 584
Query: 1878 RKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDVCRGILEFAEGHRLGTSGLRWLKIHL 1699
RKMK+EEGF+YPHN+DFRGRAYPMHPHLNHLGSD+CRGILEF+EG LG SGLRWLKIH+
Sbjct: 585 RKMKEEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGILEFSEGKPLGKSGLRWLKIHV 644
Query: 1698 ANLYANGVDKLSSEGRIAFTESHLDEIFDSTDRPLEGQRWWLNAEDPFQCLAVCFNLTEA 1519
ANL+ANGVDKLS EGRI F E+HLD++FDS DRPLEG+RWWLNAEDPFQCLA C NL EA
Sbjct: 645 ANLFANGVDKLSHEGRICFIENHLDDVFDSADRPLEGKRWWLNAEDPFQCLAACINLVEA 704
Query: 1518 LRSPSPETTISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIATRVL 1339
LR+PSPETTISHIP+HQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA RVL
Sbjct: 705 LRNPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVL 764
Query: 1338 EIMKRDAQKDPAVFPDALRARVLINHVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERD 1159
+IMK DAQKDP+V PDAL AR+LIN VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERD
Sbjct: 765 DIMKEDAQKDPSVCPDALHARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERD 824
Query: 1158 AIADESELFGASCYAAKITLTALGEMFEAARDIMNWLGECAKIIASENEPVRWTTPLGLP 979
A DE+++FGA+CYAAKITLTALG+MFEAAR IMNWLG+CAKIIASENEPVRWTTPLGLP
Sbjct: 825 AFGDETQIFGAACYAAKITLTALGQMFEAARSIMNWLGDCAKIIASENEPVRWTTPLGLP 884
Query: 978 VVQPYRQIARSLVRTSLQILTLTRETDKVMVKRQRTAFPPNFVHSLDGCHMMMTALACKK 799
VVQPYR++ R L++TSLQ+LTL RETDKVMVKRQRTAFPPNFVHSLDG HMMMTA+AC+
Sbjct: 885 VVQPYRKVGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACRN 944
Query: 798 AGMNFAGVHDSYWTHACDVDELNRILREKFVELYETPVLENLLEGFQKXXXXXXXXXXPE 619
G+ FAGVHDSYWTHACDVDE++RILREKFVELYE P+LENLLEGFQ+ P+
Sbjct: 945 GGLTFAGVHDSYWTHACDVDEMSRILREKFVELYEAPILENLLEGFQQSFPTLTFPPLPD 1004
Query: 618 RGDFDLNDVLTSTYFFN 568
RGDFDL DVL S YFFN
Sbjct: 1005 RGDFDLRDVLESPYFFN 1021
>XP_007214918.1 hypothetical protein PRUPE_ppa000719mg [Prunus persica] ONI18904.1
hypothetical protein PRUPE_3G247300 [Prunus persica]
Length = 1024
Score = 1375 bits (3559), Expect = 0.0
Identities = 705/1057 (66%), Positives = 817/1057 (77%), Gaps = 2/1057 (0%)
Frame = -1
Query: 3732 SPENLMSSINFSLKIEPFVHPLDKPLKNLSKPPQNSPIMWRNIAKQVSSRTLSSKLFCLN 3553
SP N+ + F PL P S +WRN AKQ SR + F +N
Sbjct: 9 SPANISKNFTFH-----------SPLIFHKNPSMISTTVWRNFAKQAISR---KQRFHIN 54
Query: 3552 NKINYLSSFYSSKRFSGLSQDLIFIHSFKCRPQDFCSYVLDSEYPKKGLRNFCQFSSNDE 3373
++ SF + G+ Q+ +F +FK CS + SE G R SS ++
Sbjct: 55 SQ-----SFSRAYSLLGICQESVFPGNFKPFELSSCSSLRFSEV---GFRGKGAISSPED 106
Query: 3372 FFSRPKLYNLKNDIKNYGLCPKRYASVAEAVEVSNTDVDE-VGVLHXXXXXXXXXXXXXX 3196
+P ++++N I G CPK YASVAEAV S+TDV+E V V+
Sbjct: 107 CMCKPSFWSVRNPIWFNGFCPKGYASVAEAV--SSTDVEEEVSVVDEVQE---------- 154
Query: 3195 ELLKELRSQERRQSSAKRRRQFRIACGMSHKKYRTLKRRQVKIETEAWEQAANEYTELLQ 3016
LL+++ +E+R++ K+R + A GM KY LKRRQ+KIETEAWE+AA EY EL+
Sbjct: 155 -LLQQMSIEEKREAQYKQRTRQNRARGMGQGKYHMLKRRQIKIETEAWERAAKEYRELMM 213
Query: 3015 DMCRHKLAPNLPYMKSLFLGWFEPLRDRIVQEQDSFMQGETKTTCAMYFNLLPAEKMAVI 2836
DMC KLAPNLPYMKSLFLGWFEPLR+ I +EQD +G+ KT A Y + LPA+ M+VI
Sbjct: 214 DMCEQKLAPNLPYMKSLFLGWFEPLRNAIDKEQDLCRKGKNKTAYAPYIDQLPADMMSVI 273
Query: 2835 TMHKLTSLLMSGTDHHYGNTRFVNAACLIGDAIEQEVRIHNLLEQTXXXXXXKADGIILE 2656
TMHKL LLM+G +H G R V AAC IG+AIEQEVRIH LE T K E
Sbjct: 274 TMHKLMGLLMTGGEH--GTCRVVAAACTIGEAIEQEVRIHKFLEMTRKKKVDKDQ----E 327
Query: 2655 EDQSSEDAQDKEKLKRTVTNLMKKQKLRAVNQILKRRDDSKPWGAEAKAKVGSRLIELLL 2476
+S +++EKL + VTNLMKKQKL+AV I+ + D SK W EA+AKVGSRLIELL
Sbjct: 328 NGESDAAKKEREKLNKKVTNLMKKQKLKAVRGIVSKHDASKSWSLEARAKVGSRLIELLT 387
Query: 2475 QTAYIQQ-ADQTHDGSPDIRPAFVHTVKTLIKESKFASRRYGVIQCDPQILKGLEKTARH 2299
QTA+IQ ADQ DG PDIRPAFVHT +T+ K++K ASRRYGVI+CDP +LKGLEKTARH
Sbjct: 388 QTAFIQPPADQLADGPPDIRPAFVHTFRTVAKDAKNASRRYGVIECDPLVLKGLEKTARH 447
Query: 2298 MVIPYMPMLIPPFKWTGYEEGAHIFLPSYVMRTHGSRQQRDVIRRTPRKQLEMVFEALDT 2119
MVIPYMPML+PP WTGY++G + FLPSYVMR HG+RQQR+ I+RTPR+QLE VF+ALD
Sbjct: 448 MVIPYMPMLVPPLNWTGYDKGGYFFLPSYVMRIHGARQQREAIKRTPREQLEPVFKALDA 507
Query: 2118 LGSTKWRINKRVLNIIDRIWASGGRLADLVDREDIPLPEEPDTDDENQLKKWRWKVNSVK 1939
LG+T+WR+NKRVL+++DRIWASGG LADLVDR D+PLPEEPDT+DE LKKW+WKV SVK
Sbjct: 508 LGNTRWRVNKRVLSVVDRIWASGGHLADLVDRNDVPLPEEPDTEDETLLKKWKWKVKSVK 567
Query: 1938 KENSERYSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDVCRGIL 1759
KEN ER+SQRCD ELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHP+LNHLGSDVCRGIL
Sbjct: 568 KENMERHSQRCDTELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDVCRGIL 627
Query: 1758 EFAEGHRLGTSGLRWLKIHLANLYANGVDKLSSEGRIAFTESHLDEIFDSTDRPLEGQRW 1579
EF EG LG SGL WLKIHLANLYA GVDKLS EGRIAFTE+HLD+IFDS D+PLEG+RW
Sbjct: 628 EFQEGRPLGKSGLSWLKIHLANLYAGGVDKLSLEGRIAFTENHLDDIFDSVDKPLEGRRW 687
Query: 1578 WLNAEDPFQCLAVCFNLTEALRSPSPETTISHIPIHQDGSCNGLQHYAALGRDKLGAAAV 1399
WL AEDPFQCLAVC NL EALRS SPET ISHIP+HQDGSCNGLQHYAALGRDKLGAA+V
Sbjct: 688 WLKAEDPFQCLAVCINLAEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAASV 747
Query: 1398 NLVAGEKPADVYSGIATRVLEIMKRDAQKDPAVFPDALRARVLINHVDRKLVKQTVMTSV 1219
NLV GEKPADVYSGIA RVLEIM+RDAQKDP VFP+ALRA++LIN VDRKLVKQTVMTSV
Sbjct: 748 NLVTGEKPADVYSGIAVRVLEIMRRDAQKDPVVFPEALRAKLLINQVDRKLVKQTVMTSV 807
Query: 1218 YGVTYIGARDQIKRRLKERDAIADESELFGASCYAAKITLTALGEMFEAARDIMNWLGEC 1039
YGVTYIGARDQIKRRLKER +I+D++E+FG +CYAAKITLTALGEMFEAAR IM+WLGEC
Sbjct: 808 YGVTYIGARDQIKRRLKERGSISDDAEIFGCACYAAKITLTALGEMFEAARGIMSWLGEC 867
Query: 1038 AKIIASENEPVRWTTPLGLPVVQPYRQIARSLVRTSLQILTLTRETDKVMVKRQRTAFPP 859
AKIIASEN+PVRWTTPLGLPVVQPYR+ R L++TSLQ+LTL RET+KVMVKRQRTAFPP
Sbjct: 868 AKIIASENQPVRWTTPLGLPVVQPYRKFGRHLIKTSLQVLTLQRETEKVMVKRQRTAFPP 927
Query: 858 NFVHSLDGCHMMMTALACKKAGMNFAGVHDSYWTHACDVDELNRILREKFVELYETPVLE 679
NFVHSLD HMMMTA+ACKKAG++FAGVHDSYWTHACDVDE+N+ILREKFV+LYETP+LE
Sbjct: 928 NFVHSLDSSHMMMTAIACKKAGLSFAGVHDSYWTHACDVDEMNKILREKFVQLYETPILE 987
Query: 678 NLLEGFQKXXXXXXXXXXPERGDFDLNDVLTSTYFFN 568
NLLE FQ+ PERGDFDL DVL S YFFN
Sbjct: 988 NLLESFQQSFPALTFPPLPERGDFDLRDVLESPYFFN 1024
>KZV25000.1 DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
[Dorcoceras hygrometricum]
Length = 1029
Score = 1371 bits (3548), Expect = 0.0
Identities = 688/1039 (66%), Positives = 825/1039 (79%), Gaps = 6/1039 (0%)
Frame = -1
Query: 3666 DKPLKNLSKPPQNSPIMWRNIAKQVSSRTLSSKLFCLNNKINYLS----SFYSSKRFSGL 3499
+KP + K P N +MW+NIAK++ + +SK L ++YL S +S RF L
Sbjct: 20 NKPEVFILKTPSNPTVMWKNIAKRLINP--NSKTSSLTRTLSYLGYSNKSNFSEFRFKPL 77
Query: 3498 SQDLIFIHSFKCRPQDFCSYVLDSEYPKKGLRNFCQFSSNDEFFSRPKLYNLKNDIKNY- 3322
+ + HS C P G R F S D + + L++ + + +Y
Sbjct: 78 IE--LDSHSNMC-------------LPGWGSRKIIDFLSGDVYLAG-LLWHGERTLSDYN 121
Query: 3321 GLCPKRYASVAEAVEVSNTDVDEVGVLHXXXXXXXXXXXXXXELLKELRSQERRQSSAKR 3142
G + YA+VAEAVEVS+TD++E + + LL E+R +ERR+ S +
Sbjct: 122 GSRLRSYATVAEAVEVSHTDLEEDSIPNVCAANEVQE------LLNEVRKEERRKYSKQW 175
Query: 3141 RRQFRIACGMSHKKYRTLKRRQVKIETEAWEQAANEYTELLQDMCRHKLAPNLPYMKSLF 2962
RRQ R GM KYR LKRRQVKIETEAW QAA EY ELL DMC KLAPNLPY+KSLF
Sbjct: 176 RRQ-RYVKGMGKGKYRALKRRQVKIETEAWVQAAKEYKELLNDMCEQKLAPNLPYIKSLF 234
Query: 2961 LGWFEPLRDRIVQEQDSFMQGETKTTCAMYFNLLPAEKMAVITMHKLTSLLMSGTDHHYG 2782
LGWFEPLRD+I +EQ+ +G+ +T A YF+ LPA+ MAVITMHKL LLM+G +H G
Sbjct: 235 LGWFEPLRDKIDEEQEFIRRGKCRTGYAPYFDHLPADMMAVITMHKLVGLLMTGGEH--G 292
Query: 2781 NTRFVNAACLIGDAIEQEVRIHNLLEQTXXXXXXKADGIILEEDQSSEDAQDKEKLKRTV 2602
R V+AAC+IGDAIE EVRIH +LE + I E D S+++ Q++EKL++ V
Sbjct: 293 GARVVHAACIIGDAIEHEVRIHRILESRKKKKVE--NDIEDEGDGSNDNPQEQEKLRKKV 350
Query: 2601 TNLMKKQKLRAVNQILKRRDDSKPWGAEAKAKVGSRLIELLLQTAYIQQ-ADQTHDGSPD 2425
TNL+KKQKLRAV Q++ + + KPWG +AKAKVGSRLIEL+LQTAYIQ A+Q DG PD
Sbjct: 351 TNLIKKQKLRAVRQLVSSQHEGKPWGQDAKAKVGSRLIELILQTAYIQSPANQLADGPPD 410
Query: 2424 IRPAFVHTVKTLIKESKFASRRYGVIQCDPQILKGLEKTARHMVIPYMPMLIPPFKWTGY 2245
+RPAF HT +T+ E+K ASRRYGVIQCDP + KGLE+TA HM+IPYMPML+ P KWTGY
Sbjct: 411 VRPAFTHTCRTVASETKTASRRYGVIQCDPLVRKGLERTASHMIIPYMPMLVHPIKWTGY 470
Query: 2244 EEGAHIFLPSYVMRTHGSRQQRDVIRRTPRKQLEMVFEALDTLGSTKWRINKRVLNIIDR 2065
+ GA+++LPSYVMRTHG+RQQR+ ++RTPRKQL++VFEALDTLGST+WR+NKRVL+++DR
Sbjct: 471 DNGAYLYLPSYVMRTHGARQQREAVKRTPRKQLQLVFEALDTLGSTRWRVNKRVLDVVDR 530
Query: 2064 IWASGGRLADLVDREDIPLPEEPDTDDENQLKKWRWKVNSVKKENSERYSQRCDIELKLA 1885
IWA+GGRLA L+DR+D+PLP+EPDT+DE+ +KKW+WKV ++KKEN ERYSQRCD ELKL+
Sbjct: 531 IWANGGRLAGLIDRDDVPLPDEPDTEDESIIKKWKWKVKAIKKENRERYSQRCDTELKLS 590
Query: 1884 VARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDVCRGILEFAEGHRLGTSGLRWLKI 1705
VARKMK+EEGF+YPHNLDFRGRAYPMHPHLNHLGSD+CRGILEF+EG LG SGL WLKI
Sbjct: 591 VARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFSEGRPLGQSGLHWLKI 650
Query: 1704 HLANLYANGVDKLSSEGRIAFTESHLDEIFDSTDRPLEGQRWWLNAEDPFQCLAVCFNLT 1525
HLANL+ANGVDKLS EGR++FTE+HLD+IFDS DRPLEG+RWWLNAEDPFQCLAVC NL
Sbjct: 651 HLANLFANGVDKLSHEGRVSFTENHLDDIFDSADRPLEGRRWWLNAEDPFQCLAVCINLA 710
Query: 1524 EALRSPSPETTISHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIATR 1345
EALR+P PETTISHIP+HQDGSCNGLQHYAALGRDKLGA AVNL+AGEKPADVYSGIA R
Sbjct: 711 EALRNPFPETTISHIPVHQDGSCNGLQHYAALGRDKLGAGAVNLIAGEKPADVYSGIAAR 770
Query: 1344 VLEIMKRDAQKDPAVFPDALRARVLINHVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE 1165
VL+IMK+DAQKDP +FPD+LRAR+LI+ VDRKLVKQTVMTSVYGVTY+GARDQIKRRLKE
Sbjct: 771 VLDIMKKDAQKDPVIFPDSLRARLLIDQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKE 830
Query: 1164 RDAIADESELFGASCYAAKITLTALGEMFEAARDIMNWLGECAKIIASENEPVRWTTPLG 985
R AI D++ELFGA+CYAAKITLTAL +MFEAAR IM WLG+CAKIIASEN+PV+WTTPLG
Sbjct: 831 RGAIEDDAELFGAACYAAKITLTALEQMFEAARSIMGWLGDCAKIIASENQPVQWTTPLG 890
Query: 984 LPVVQPYRQIARSLVRTSLQILTLTRETDKVMVKRQRTAFPPNFVHSLDGCHMMMTALAC 805
LPVVQPYR+I R L++TSLQ+LTL RE++K+MVKRQRTAFPPNFVHSLDG HMMMTA+AC
Sbjct: 891 LPVVQPYRKIGRHLIKTSLQVLTLQRESEKIMVKRQRTAFPPNFVHSLDGSHMMMTAIAC 950
Query: 804 KKAGMNFAGVHDSYWTHACDVDELNRILREKFVELYETPVLENLLEGFQKXXXXXXXXXX 625
K AG+NFAGVHDSYWTHACDVD +N+ILREKFV+LYETP+LENLL GFQ
Sbjct: 951 KNAGLNFAGVHDSYWTHACDVDHMNQILREKFVQLYETPILENLLLGFQTSFPSLSFPPL 1010
Query: 624 PERGDFDLNDVLTSTYFFN 568
P RGDFDL +VL S YFFN
Sbjct: 1011 PGRGDFDLREVLQSPYFFN 1029