BLASTX nr result

ID: Lithospermum23_contig00011787 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00011787
         (725 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KCW55427.1 hypothetical protein EUGRSUZ_I01330 [Eucalyptus grandis]    59   1e-07
OMP05967.1 hypothetical protein COLO4_08423 [Corchorus olitorius]      58   5e-06

>KCW55427.1 hypothetical protein EUGRSUZ_I01330 [Eucalyptus grandis]
          Length = 121

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 28/35 (80%), Positives = 31/35 (88%)
 Frame = -2

Query: 481 ISLKGRGQGVDLGTSTLSLIRSMILSFFPLAFPYD 377
           +SLKGRGQGVDLGTSTLSL+RS+  SFF  AFPYD
Sbjct: 1   MSLKGRGQGVDLGTSTLSLMRSIFFSFFGRAFPYD 35


>OMP05967.1 hypothetical protein COLO4_08423 [Corchorus olitorius]
          Length = 840

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = -2

Query: 481 ISLKGRGQGVDLGTSTLSLIRSMILSFFPLAFPYD 377
           +SLKGRGQGVDLGTST SLIRS+I SF  L FPYD
Sbjct: 1   MSLKGRGQGVDLGTSTSSLIRSIIFSFLGLVFPYD 35


Top