BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00009312
         (2588 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CDP02762.1 unnamed protein product [Coffea canephora]                 705   0.0  
XP_011099540.1 PREDICTED: chloroplastic group IIA intron splicin...   690   0.0  
XP_010660411.1 PREDICTED: chloroplastic group IIA intron splicin...   688   0.0  
XP_011099539.1 PREDICTED: chloroplastic group IIA intron splicin...   686   0.0  
XP_010316321.1 PREDICTED: chloroplastic group IIA intron splicin...   685   0.0  
XP_006357840.1 PREDICTED: chloroplastic group IIA intron splicin...   683   0.0  
XP_015169109.1 PREDICTED: chloroplastic group IIA intron splicin...   681   0.0  
XP_016435862.1 PREDICTED: chloroplastic group IIA intron splicin...   679   0.0  
XP_016560772.1 PREDICTED: chloroplastic group IIA intron splicin...   681   0.0  
XP_016560773.1 PREDICTED: chloroplastic group IIA intron splicin...   681   0.0  
XP_019262115.1 PREDICTED: chloroplastic group IIA intron splicin...   681   0.0  
XP_009598916.1 PREDICTED: chloroplastic group IIA intron splicin...   681   0.0  
XP_019262116.1 PREDICTED: chloroplastic group IIA intron splicin...   679   0.0  
XP_015065406.1 PREDICTED: chloroplastic group IIA intron splicin...   679   0.0  
XP_009598920.1 PREDICTED: chloroplastic group IIA intron splicin...   679   0.0  
XP_015065411.1 PREDICTED: chloroplastic group IIA intron splicin...   679   0.0  
XP_009787271.1 PREDICTED: chloroplastic group IIA intron splicin...   678   0.0  
XP_019080763.1 PREDICTED: chloroplastic group IIA intron splicin...   679   0.0  
XP_019080766.1 PREDICTED: chloroplastic group IIA intron splicin...   678   0.0  
XP_009787273.1 PREDICTED: chloroplastic group IIA intron splicin...   676   0.0  

>CDP02762.1 unnamed protein product [Coffea canephora]
          Length = 826

 Score =  705 bits (1820), Expect = 0.0
 Identities = 383/731 (52%), Positives = 491/731 (67%), Gaps = 42/731 (5%)
 Frame = +2

Query: 191  ATNEESTEQDASFIKAPTAPWMKGPLLVQENQ------RPTTKRDPKFLQFE--RTGKAL 346
            +++E ST +  S IKAPTAPWM+GPLLV+ NQ      RP +K+   F + E     +AL
Sbjct: 69   SSSEPSTSKPCSVIKAPTAPWMQGPLLVEPNQFLNLSDRPRSKKGSNFGRIEDHHPDQAL 128

Query: 347  FGKQGCGRGKKEMNKVYQGFEKLQRTHNSVHTQTPPLEIKFKFSS------------QGL 490
             GK G GRGKKEM K+++G +KLQ + +   T   P  +KF FS             +GL
Sbjct: 129  TGKMGAGRGKKEMKKIFKGIKKLQDSKSLEKTHKKPEMVKFIFSPGELPGGGDSAYVEGL 188

Query: 491  FGDTQNK----------------LDKIGIDSK-----KMPWVKDDKLVIKRVKKERIMSS 607
              + +++                L K+  + K     KMPW + +KLV  +VKKE+++++
Sbjct: 189  ISEREDEKMDAQKIVEESEVGFQLGKVEGEGKAKFGGKMPWDRGEKLVTWKVKKEKVVTA 248

Query: 608  AELNFDAFLLDRLXXXXXXXXXXXXXXXXXVNQSVIDQVRFIWRDNELAMLKFDLPLCRN 787
            AEL+ D  LLDRL                 V Q V+ +V  IW++NELAMLKFDLPLCRN
Sbjct: 249  AELSLDEELLDRLRDEASRMRKWVKVMKAGVTQEVVHRVHAIWKNNELAMLKFDLPLCRN 308

Query: 788  MERAREITEIKTGGFVVWVNKDALFVYKGCNYHSGLNSHSSMISNIQDTESQHEVNCHDQ 967
            M+RA+EI E+KTGG VVW  + AL +Y+G NY S L +  S  +  +DT    EVN  + 
Sbjct: 309  MDRAQEILEMKTGGVVVWRKQHALVIYRGGNYLSALKT--SFDNCCRDTIITFEVNSSEH 366

Query: 968  SQDEMLGKTENDGSNLLISGTLYDREADRLLDGLGPRFIDWWGRKPLPVDADLLQEVVPG 1147
                M+ K +    N+L++G+LY++EADRLLDGLGPRF DWW RKPLPVD DLL+EVVPG
Sbjct: 367  GLVGMMSKMDKKEENVLMNGSLYEKEADRLLDGLGPRFYDWWWRKPLPVDGDLLREVVPG 426

Query: 1148 FKPPWRICLPGVRLKLTDDELTHFRMLARPLPTHFVLGRNRNLQGMAVAILKLWERCHIA 1327
            F PP+R+C P  R +LTDDELT+ R LARPLPTHFVLGRNR LQG+A AILKLWE+CHIA
Sbjct: 427  FMPPFRLCPPHARSQLTDDELTYLRKLARPLPTHFVLGRNRKLQGLAAAILKLWEKCHIA 486

Query: 1328 KIALKVGVPNTDNEQMANEXXXXXXXXXXXRNKFLIIIYRGKDFLPPHVANIVMERESDL 1507
            KIA+K GVPNTDN+QMA E           RNKFLII+YRGKDFLP  VA +V  RE +L
Sbjct: 487  KIAIKWGVPNTDNKQMAYELKCLTGGILLLRNKFLIILYRGKDFLPSRVAELVTIREMEL 546

Query: 1508 RRYQHQEEAARLVPNEQIL-VPHELQGNSISGTLTEFQSIHSECMTLNNGNEKVELELRT 1684
               Q  EE+ARL  +E    +P     NS  GTL+EF  I S+ + L +GN K E+EL  
Sbjct: 547  TECQLMEESARLRASETATQIPSSKSANS--GTLSEFLRIQSKHLGLGHGNSKAEVELEA 604

Query: 1685 QKEMIEKELRFERQKLFILKKKIKDSEKYLNKLNLAWQSSEPAADHEVLTDEERECLRMI 1864
            +KE +E+ELR +++KLF+LKKKI+ S K L  LN  W+ +E   D E+LT EERECLR +
Sbjct: 605  EKEQLERELRDQQRKLFLLKKKIEKSAKRLADLNSLWRPAERDTDQEMLTQEERECLRKM 664

Query: 1865 GLKMDSNLILGRRGVFDGVIEGLHQHWKNREVVKVITMQRRFPQITYAAKLLTAESGGVL 2044
            GLKM S+L+LGRRGVF+GVIE LHQ+WK+RE+VKVITMQ+ F Q+ Y AK L AESGG+L
Sbjct: 665  GLKMVSSLVLGRRGVFNGVIESLHQYWKHREIVKVITMQKMFSQVVYTAKFLEAESGGIL 724

Query: 2045 VSVDKLKEGHAIIIYRGKNYVRPALVQSKLPNKIDALRRSLLMQRIGSMKFFAKQKEQAI 2224
            VSVDK KEGH+II+YRGKNY RP L    LP++ +AL RSL MQRIGS+KFFA+Q+EQ +
Sbjct: 725  VSVDKHKEGHSIILYRGKNYRRPKLAPLNLPSRREALSRSLEMQRIGSLKFFARQREQMV 784

Query: 2225 SNLMDKMSALD 2257
            S+L  K+  +D
Sbjct: 785  SDLQFKLRKID 795


>XP_011099540.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Sesamum indicum] XP_011099541.1
            PREDICTED: chloroplastic group IIA intron splicing
            facilitator CRS1, chloroplastic isoform X2 [Sesamum
            indicum]
          Length = 805

 Score =  690 bits (1780), Expect = 0.0
 Identities = 378/735 (51%), Positives = 480/735 (65%), Gaps = 46/735 (6%)
 Frame = +2

Query: 197  NEESTEQDASFIKAPTAPWMKGPLLVQENQ-----RPTTKRDPKFLQFERTGKA-LFGKQ 358
            + E      S IK PTAPWM G LLV+ N+     +  T RD  F +  +     L GK 
Sbjct: 70   SSEPISHSGSGIKGPTAPWMNGTLLVKPNEIMEFRKSRTNRDSTFGENRKHPDVDLTGKV 129

Query: 359  GCGRGKKEMNKVYQGFEKLQRTHNSVHTQTPPLEIKFKFSSQGLFGD------------- 499
            G GRGK  M K+++G EKLQ   N   T+  P  +KF+F+   L+GD             
Sbjct: 130  GGGRGKVAMKKIFKGIEKLQENQNLEETRNDPKNLKFRFAPGALWGDGDCENGSEVEEKS 189

Query: 500  --TQNKLDKIGIDS-----------KKMPWVKDDKLVIKRVKKERIMSSAELNFDAFLLD 640
               Q   +  G D            K+MPW + +K+VI+ VKKE+++ + EL  D  LL+
Sbjct: 190  EAAQESWESNGFDIPLPEVEKEVKLKEMPWQRHEKMVIRMVKKEKVVRADELGLDEMLLE 249

Query: 641  RLXXXXXXXXXXXXXXXXXVNQSVIDQVRFIWRDNELAMLKFDLPLCRNMERAREITEIK 820
            RL                 V Q+V+DQV F+WR+NELA+LKFDLPLCRNM RAREI E+K
Sbjct: 250  RLRGEAATIRKWVKVKKAGVTQAVVDQVHFVWRNNELALLKFDLPLCRNMHRAREIVEMK 309

Query: 821  TGGFVVWVNKDALFVYKGCNYHSGL----NSHS---------SMISNIQDTESQHEVNCH 961
            TGG VVW NKD L VY+GCNY SG     N H          S   N Q+T +   V+  
Sbjct: 310  TGGVVVWSNKDFLAVYRGCNYKSGSKNFWNKHGKSAGDEENFSSTMNHQNTTTVARVSPD 369

Query: 962  DQSQDEMLGKTENDGSNLLISGTLYDREADRLLDGLGPRFIDWWGRKPLPVDADLLQEVV 1141
              + DEM+ + + +  +L +  +LY+READRLLDGLGPRF+DWW +KPLPVDADLL E+V
Sbjct: 370  GSALDEMIHEKDGEWESLHMP-SLYEREADRLLDGLGPRFVDWWMQKPLPVDADLLPELV 428

Query: 1142 PGFKPPWRICLPGVRLKLTDDELTHFRMLARPLPTHFVLGRNRNLQGMAVAILKLWERCH 1321
            PGFK P+R+C P  R KLTD ELT+ R LARPLPTHFVLGRNR LQG+A AILKLWE+CH
Sbjct: 429  PGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAAILKLWEKCH 488

Query: 1322 IAKIALKVGVPNTDNEQMANEXXXXXXXXXXXRNKFLIIIYRGKDFLPPHVANIVMERES 1501
            IAKIALK G+PNTDNEQMANE           RNK+LII+YRGKDF+P  VA  V ERE 
Sbjct: 489  IAKIALKWGIPNTDNEQMANELKNLTGGVLLLRNKYLIILYRGKDFVPSEVAEAVAEREM 548

Query: 1502 DLRRYQHQEEAARLVPNEQILVPHELQGNS-ISGTLTEFQSIHSECMTLNNGNEKVELEL 1678
            +L R Q +EE ARL  +E   +  E   NS I GTL+EFQ IHSE         ++E++L
Sbjct: 549  ELTRCQLREETARLKASEAFSISDEDSVNSGIVGTLSEFQHIHSEIGNHKKRETEIEVQL 608

Query: 1679 RTQKEMIEKELRFERQKLFILKKKIKDSEKYLNKLNLAWQSSEPAADHEVLTDEERECLR 1858
              ++E +EKEL+ + +KL+ILKKKI+ S K L KL  A + SE   D EV++ EER+CLR
Sbjct: 609  EAERERLEKELKEQERKLYILKKKIEKSAKRLEKLKNASRFSEQDPDVEVISKEERQCLR 668

Query: 1859 MIGLKMDSNLILGRRGVFDGVIEGLHQHWKNREVVKVITMQRRFPQITYAAKLLTAESGG 2038
             +GLK+DS+L+LGRRGV+DGVIEG+HQHWK+RE+VKVITMQ++  Q+ + AK L AESGG
Sbjct: 669  EMGLKIDSSLVLGRRGVYDGVIEGIHQHWKHREIVKVITMQKKLLQVLHTAKCLEAESGG 728

Query: 2039 VLVSVDKLKEGHAIIIYRGKNYVRPALVQSKLPNKIDALRRSLLMQRIGSMKFFAKQKEQ 2218
            +LV+V KLKEGHAII+YRGKNY RP      L +K +AL RSL +QR+GS+KFFA Q+EQ
Sbjct: 729  ILVNVIKLKEGHAIILYRGKNYKRPKSAAQNLLSKKEALSRSLEIQRLGSLKFFANQREQ 788

Query: 2219 AISNLMDKMSALDEK 2263
            AI +L  +++ L EK
Sbjct: 789  AICDLKSELAELLEK 803


>XP_010660411.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Vitis vinifera]
          Length = 828

 Score =  688 bits (1776), Expect = 0.0
 Identities = 375/713 (52%), Positives = 479/713 (67%), Gaps = 36/713 (5%)
 Frame = +2

Query: 230  IKAPTAPWMKGPLLVQENQ-RPTTKRDPKFLQ----FERTGKALFGKQGCGRGKKEMNKV 394
            IK PTAPWMKGPLL+Q N+    +K  PK +      E+  ++L  K   GRG K M K+
Sbjct: 73   IKMPTAPWMKGPLLLQPNEVLDLSKARPKKVAGSAGAEKPDRSLTEKVSGGRGAKAMKKI 132

Query: 395  YQGFEKLQRTHNSVHTQTPPLEIKFKFSSQGLFGDTQNKLDKIGIDSKKMPWVKDDKLVI 574
             Q   KLQ TH S  TQ    E +F  S +G+ GD  +++        KMPW+K +K+V 
Sbjct: 133  MQSIVKLQETHTSDETQENTEEFEFGVSLEGIGGDENSRI------GGKMPWLKTEKVVF 186

Query: 575  KRVKKERIMSSAELNFDAFLLDRLXXXXXXXXXXXXXXXXXVNQSVIDQVRFIWRDNELA 754
            +R KKE+++++AEL  D  LL+RL                 V +SV+DQ+  +W+ +ELA
Sbjct: 187  RRTKKEKVVTAAELTLDPMLLERLRGEAVKMRKWVKVKKAGVTESVVDQIHMVWKSDELA 246

Query: 755  MLKFDLPLCRNMERAREITEIKTGGFVVWVNKDALFVYKGCNYHS--------------G 892
            M+KFD+PLCRNM+RAREI EIKT G V+W  KD L VY+G NY S              G
Sbjct: 247  MVKFDMPLCRNMDRAREILEIKTRGLVIWSKKDTLVVYRGSNYQSTSKHFQKMRPGLVAG 306

Query: 893  LNSHSSMI--SNIQDTESQHEVNCHDQSQDEMLGKT--ENDGS-----------NLLISG 1027
             ++ +S +  SN +D  +  E+  H+ +  E +G+   E D S           +  ++G
Sbjct: 307  ADASNSKLNQSNFEDDLTISEIKFHESTTGEKMGRKDGEEDSSPTGIFMEEMVDSQPVNG 366

Query: 1028 TLYDREADRLLDGLGPRFIDWWGRKPLPVDADLLQEVVPGFKPPWRICLPGVRLKLTDDE 1207
            +LY+READRLLDGLGPRFIDWW  KPLPVDADLL EV+PGF+PP+R+  P  R KLTDDE
Sbjct: 367  SLYEREADRLLDGLGPRFIDWWRPKPLPVDADLLPEVLPGFRPPFRLSPPQTRSKLTDDE 426

Query: 1208 LTHFRMLARPLPTHFVLGRNRNLQGMAVAILKLWERCHIAKIALKVGVPNTDNEQMANEX 1387
            LT+ R LA  LPTHFVLGRNR LQG+A AILKLWE+  I KIA+K G+PNT NEQMANE 
Sbjct: 427  LTYLRKLAYALPTHFVLGRNRKLQGLAAAILKLWEKSLIVKIAIKWGIPNTKNEQMANEL 486

Query: 1388 XXXXXXXXXXRNKFLIIIYRGKDFLPPHVANIVMERESDLRRYQHQEEAARLVPNEQILV 1567
                      RNKF II+YRGKDFLP  VAN+++ERE + +  Q +EE ARL   E   V
Sbjct: 487  KCLTGGVLLLRNKFFIILYRGKDFLPCRVANLIVEREMEFKGCQIREEDARLKAIETSFV 546

Query: 1568 PHE-LQGNSISGTLTEFQSIHSECMTLNNGNEKVELELRTQKEMIEKELRFERQKLFILK 1744
              + L   S +GTL+EFQ+I +E   L +GN ++E+EL  +KE +EKEL+ + + LFILK
Sbjct: 547  TDKPLANTSTTGTLSEFQNIETEFRGLKDGNTEIEVELEAEKERLEKELKKQERNLFILK 606

Query: 1745 KKIKDSEKYLNKLNLAWQSSEPAADHEVLTDEERECLRMIGLKMDSNLILGRRGVFDGVI 1924
            +KI+ S K L KLN AW+ ++  AD E++T+EEREC R IG KMDS+L+LGRRGVFDGVI
Sbjct: 607  RKIERSAKVLAKLNSAWRPADHDADKEMITEEERECFRKIGQKMDSSLLLGRRGVFDGVI 666

Query: 1925 EGLHQHWKNREVVKVITMQRRFPQITYAAKLLTAESGGVLVSVDKLKEGHAIIIYRGKNY 2104
            EGLHQHWK+RE+VKVITMQR F Q+ Y AKLL +ESGGVLVS+DKLKEGHAIIIYRGKNY
Sbjct: 667  EGLHQHWKHREIVKVITMQRSFSQVLYTAKLLESESGGVLVSIDKLKEGHAIIIYRGKNY 726

Query: 2105 VRP-ALVQSKLPNKIDALRRSLLMQRIGSMKFFAKQKEQAISNLMDKMSALDE 2260
             RP  LV   L  K +AL RSL MQRIGS+KFFA Q++QAIS+L  K++ L +
Sbjct: 727  RRPIKLVPKNLLTKREALNRSLEMQRIGSLKFFAYQRQQAISDLKLKLADLQK 779


>XP_011099539.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Sesamum indicum]
          Length = 806

 Score =  686 bits (1770), Expect = 0.0
 Identities = 375/729 (51%), Positives = 476/729 (65%), Gaps = 46/729 (6%)
 Frame = +2

Query: 197  NEESTEQDASFIKAPTAPWMKGPLLVQENQ-----RPTTKRDPKFLQFERTGKA-LFGKQ 358
            + E      S IK PTAPWM G LLV+ N+     +  T RD  F +  +     L GK 
Sbjct: 70   SSEPISHSGSGIKGPTAPWMNGTLLVKPNEIMEFRKSRTNRDSTFGENRKHPDVDLTGKV 129

Query: 359  GCGRGKKEMNKVYQGFEKLQRTHNSVHTQTPPLEIKFKFSSQGLFGD------------- 499
            G GRGK  M K+++G EKLQ   N   T+  P  +KF+F+   L+GD             
Sbjct: 130  GGGRGKVAMKKIFKGIEKLQENQNLEETRNDPKNLKFRFAPGALWGDGDCENGSEVEEKS 189

Query: 500  --TQNKLDKIGIDS-----------KKMPWVKDDKLVIKRVKKERIMSSAELNFDAFLLD 640
               Q   +  G D            K+MPW + +K+VI+ VKKE+++ + EL  D  LL+
Sbjct: 190  EAAQESWESNGFDIPLPEVEKEVKLKEMPWQRHEKMVIRMVKKEKVVRADELGLDEMLLE 249

Query: 641  RLXXXXXXXXXXXXXXXXXVNQSVIDQVRFIWRDNELAMLKFDLPLCRNMERAREITEIK 820
            RL                 V Q+V+DQV F+WR+NELA+LKFDLPLCRNM RAREI E+K
Sbjct: 250  RLRGEAATIRKWVKVKKAGVTQAVVDQVHFVWRNNELALLKFDLPLCRNMHRAREIVEMK 309

Query: 821  TGGFVVWVNKDALFVYKGCNYHSGL----NSHS---------SMISNIQDTESQHEVNCH 961
            TGG VVW NKD L VY+GCNY SG     N H          S   N Q+T +   V+  
Sbjct: 310  TGGVVVWSNKDFLAVYRGCNYKSGSKNFWNKHGKSAGDEENFSSTMNHQNTTTVARVSPD 369

Query: 962  DQSQDEMLGKTENDGSNLLISGTLYDREADRLLDGLGPRFIDWWGRKPLPVDADLLQEVV 1141
              + DEM+ + + +  +L +  +LY+READRLLDGLGPRF+DWW +KPLPVDADLL E+V
Sbjct: 370  GSALDEMIHEKDGEWESLHMP-SLYEREADRLLDGLGPRFVDWWMQKPLPVDADLLPELV 428

Query: 1142 PGFKPPWRICLPGVRLKLTDDELTHFRMLARPLPTHFVLGRNRNLQGMAVAILKLWERCH 1321
            PGFK P+R+C P  R KLTD ELT+ R LARPLPTHFVLGRNR LQG+A AILKLWE+CH
Sbjct: 429  PGFKTPFRLCPPFTRSKLTDAELTYLRKLARPLPTHFVLGRNRKLQGLAAAILKLWEKCH 488

Query: 1322 IAKIALKVGVPNTDNEQMANEXXXXXXXXXXXRNKFLIIIYRGKDFLPPHVANIVMERES 1501
            IAKIALK G+PNTDNEQMANE           RNK+LII+YRGKDF+P  VA  V ERE 
Sbjct: 489  IAKIALKWGIPNTDNEQMANELKNLTGGVLLLRNKYLIILYRGKDFVPSEVAEAVAEREM 548

Query: 1502 DLRRYQHQEEAARLVPNEQILVPHELQGNS-ISGTLTEFQSIHSECMTLNNGNEKVELEL 1678
            +L R Q +EE ARL  +E   +  E   NS I GTL+EFQ IHSE         ++E++L
Sbjct: 549  ELTRCQLREETARLKASEAFSISDEDSVNSGIVGTLSEFQHIHSEIGNHKKRETEIEVQL 608

Query: 1679 RTQKEMIEKELRFERQKLFILKKKIKDSEKYLNKLNLAWQSSEPAADHEVLTDEERECLR 1858
              ++E +EKEL+ + +KL+ILKKKI+ S K L KL  A + SE   D EV++ EER+CLR
Sbjct: 609  EAERERLEKELKEQERKLYILKKKIEKSAKRLEKLKNASRFSEQDPDVEVISKEERQCLR 668

Query: 1859 MIGLKMDSNLILGRRGVFDGVIEGLHQHWKNREVVKVITMQRRFPQITYAAKLLTAESGG 2038
             +GLK+DS+L+LGRRGV+DGVIEG+HQHWK+RE+VKVITMQ++  Q+ + AK L AESGG
Sbjct: 669  EMGLKIDSSLVLGRRGVYDGVIEGIHQHWKHREIVKVITMQKKLLQVLHTAKCLEAESGG 728

Query: 2039 VLVSVDKLKEGHAIIIYRGKNYVRPALVQSKLPNKIDALRRSLLMQRIGSMKFFAKQKEQ 2218
            +LV+V KLKEGHAII+YRGKNY RP      L +K +AL RSL +QR+GS+KFFA Q+EQ
Sbjct: 729  ILVNVIKLKEGHAIILYRGKNYKRPKSAAQNLLSKKEALSRSLEIQRLGSLKFFANQREQ 788

Query: 2219 AISNLMDKM 2245
            AI +L  ++
Sbjct: 789  AICDLKSEL 797


>XP_010316321.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Solanum lycopersicum] XP_010316322.1
            PREDICTED: chloroplastic group IIA intron splicing
            facilitator CRS1, chloroplastic [Solanum lycopersicum]
            XP_019067966.1 PREDICTED: chloroplastic group IIA intron
            splicing facilitator CRS1, chloroplastic [Solanum
            lycopersicum] XP_019067967.1 PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            [Solanum lycopersicum]
          Length = 802

 Score =  685 bits (1767), Expect = 0.0
 Identities = 376/750 (50%), Positives = 490/750 (65%), Gaps = 54/750 (7%)
 Frame = +2

Query: 179  RPLKATNEESTEQD----ASFIKAPTAPWMKGPLLVQENQ-----RPTTKRDPKFLQFER 331
            + ++  N E   QD    +S IK PTAPWM+GPLL++ NQ     +   K+D  F + + 
Sbjct: 53   KKVEQCNLEFENQDYGSSSSGIKGPTAPWMRGPLLLEPNQVLDLSKSRKKKDTNFAKTQN 112

Query: 332  TGKALFGKQGCGRGKKEMNKVYQGFEKLQRTHNSVHTQTPP-LEIKFKFSSQGL--FGDT 502
               AL GK   GRGKK M  +YQG +KLQ T     TQ    ++++F+F    L  +GD 
Sbjct: 113  PNDALSGKVSGGRGKKAMKMIYQGIDKLQETQIGECTQVETDVKVEFQFPPGSLSGWGDV 172

Query: 503  QNKLDK-----------------IGIDSK------------KMPWVKDDKLVIKRVKKER 595
              ++++                  G+ S+            +MPW  ++++V +R+KKE+
Sbjct: 173  SYEIEEKNPYGEEDNVESLEGVEFGVLSREGEGRGSRKSGARMPWESEERIVYRRMKKEK 232

Query: 596  IMSSAELNFDAFLLDRLXXXXXXXXXXXXXXXXXVNQSVIDQVRFIWRDNELAMLKFDLP 775
            ++ +AE N DA LL+RL                 V ++V+DQ++FIW++NELAMLKFDLP
Sbjct: 233  VVRTAESNLDAMLLERLRGEAARIQKWVKVKKAGVTRTVVDQIQFIWKNNELAMLKFDLP 292

Query: 776  LCRNMERAREITEIKTGGFVVWVNKDALFVYKGCNY--------HSGLNSHS--SMISNI 925
            LCRNM+RAR+I E+KTGGFVVW+ ++AL VY+GC+Y        H  L SH   S   NI
Sbjct: 293  LCRNMDRARDIVEMKTGGFVVWMKQNALVVYRGCSYTLQLKELQHDFLRSHQNPSFTENI 352

Query: 926  QDTESQHEVNCHDQSQDEMLGKTENDGSNLLISGTLYDREADRLLDGLGPRFIDWWGRKP 1105
            ++T     +N    S+DEM+    ++  +L+++ +LY+REA+RLLD LGPR++DWW  KP
Sbjct: 353  EETSIFSPLNLSGSSEDEMISVGNSEEDSLVMNESLYEREANRLLDDLGPRYVDWWWPKP 412

Query: 1106 LPVDADLLQEVVPGFKPPWRICLPGVRLKLTDDELTHFRMLARPLPTHFVLGRNRNLQGM 1285
            LPVDADLL EVVPGFKPP+R+C P  R KLTDDELT  R LAR LPTHFVLGRNR LQG+
Sbjct: 413  LPVDADLLPEVVPGFKPPFRLCPPRSRSKLTDDELTQLRKLARSLPTHFVLGRNRKLQGL 472

Query: 1286 AVAILKLWERCHIAKIALKVGVPNTDNEQMANEXXXXXXXXXXXRNKFLIIIYRGKDFLP 1465
            A A++KLWE+CHIAKIALK G+PN  NE MANE           RNKF II+YRGKDFLP
Sbjct: 473  AAALVKLWEKCHIAKIALKWGIPNASNELMANELKYLTGGVLLLRNKFFIILYRGKDFLP 532

Query: 1466 PHVANIVMERESDLRRYQHQEEAARLVPNEQILVPHEL-QGNSISGTLTEFQSIHSECMT 1642
              VA +V ERE +L R Q +EE AR    E + +  E    +SI GTL+EFQ+I      
Sbjct: 533  SQVAKLVAEREVELTRCQLEEEVARFKAIETLPITMEASMSSSIVGTLSEFQTI------ 586

Query: 1643 LNNGNEK--VELELRTQKEMIEKELRFERQKLFILKKKIKDSEKYLNKLNLAWQSSEPAA 1816
               G EK  VE++L ++KE +EKE+R ++  L+ILKKKI+ S   L KLN AW+ ++   
Sbjct: 587  AEPGKEKSEVEVQLMSEKERLEKEVRNQQDSLYILKKKIEKSSIALGKLNAAWRPAKEDD 646

Query: 1817 DHEVLTDEERECLRMIGLKMDSNLILGRRGVFDGVIEGLHQHWKNREVVKVITMQRRFPQ 1996
            D E+LT EER  LR IGLKMD +L+LGRRGVFDGV+ GLHQHWK+REV+KVITMQ+ F Q
Sbjct: 647  DKEILTQEERRSLRQIGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVIKVITMQKIFSQ 706

Query: 1997 ITYAAKLLTAESGGVLVSVDKLKEGHAIIIYRGKNYVRPALVQSKLPNKIDALRRSLLMQ 2176
            + + AKLL  ESGG+L+SVDK+KEGHAIIIYRGKNY RP LV   L NK  AL RSL MQ
Sbjct: 707  VIHTAKLLETESGGILISVDKIKEGHAIIIYRGKNYRRPELVPQNLLNKRQALCRSLEMQ 766

Query: 2177 RIGSMKFFAKQKEQAISNLMDKMSALDEKI 2266
            R+GS+KF+A Q EQAIS+L  K+     KI
Sbjct: 767  RLGSLKFYANQTEQAISDLKLKLVEYTVKI 796


>XP_006357840.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Solanum tuberosum]
            XP_015169107.1 PREDICTED: chloroplastic group IIA intron
            splicing facilitator CRS1, chloroplastic isoform X1
            [Solanum tuberosum] XP_015169108.1 PREDICTED:
            chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Solanum tuberosum]
          Length = 802

 Score =  683 bits (1762), Expect = 0.0
 Identities = 381/744 (51%), Positives = 482/744 (64%), Gaps = 54/744 (7%)
 Frame = +2

Query: 197  NEESTEQD----ASFIKAPTAPWMKGPLLVQENQ-----RPTTKRDPKFLQFERTGKALF 349
            N E   QD    +S IK PTAPWM+GPLL++ NQ     +   K+D  F + +    AL 
Sbjct: 59   NLEFENQDYGSSSSGIKGPTAPWMRGPLLLEPNQFLDLSKSRKKKDANFAKTQNPNDALS 118

Query: 350  GKQGCGRGKKEMNKVYQGFEKLQRTHNSVHTQTPP---LEIKFKFSSQGLFGDTQNKLDK 520
            GK   GRGKK M  +YQG +KLQ T     TQ      +E +F   S   +GD   ++++
Sbjct: 119  GKVSGGRGKKAMKMIYQGIDKLQETQIGEGTQVETDAKVEFQFPPGSLSEWGDVSYEIEE 178

Query: 521  -----------------IGIDSK------------KMPWVKDDKLVIKRVKKERIMSSAE 613
                              G+ S+            KMPW  + ++V +R+KKE+++ +AE
Sbjct: 179  KNPYGEEDNVESLEGVEFGVLSREGEGRGSRKIGVKMPWESEVRIVYRRMKKEKVVMTAE 238

Query: 614  LNFDAFLLDRLXXXXXXXXXXXXXXXXXVNQSVIDQVRFIWRDNELAMLKFDLPLCRNME 793
             N DA LL+RL                 V ++V+DQ+ FIW++NELAMLKFDLPLCRNM+
Sbjct: 239  SNLDAMLLERLRGEAARIQKWVKVKKAGVTRTVVDQIHFIWKNNELAMLKFDLPLCRNMD 298

Query: 794  RAREITEIKTGGFVVWVNKDALFVYKGCNY--------HSGLNSH--SSMISNIQDTESQ 943
            RAREI E+KTGGFVVW+ ++AL VY+GC+Y        H  L SH  SS   NI+ T   
Sbjct: 299  RAREIVEMKTGGFVVWMKQNALVVYRGCSYTLQQKELQHDFLCSHQNSSFTENIKQTSIF 358

Query: 944  HEVNCHDQSQDEMLGKTENDGSNLLISGTLYDREADRLLDGLGPRFIDWWGRKPLPVDAD 1123
              +N    S+DEM+    ++  +L ++ +LY REA+RLLD LGPR++DWW  KPLPV+AD
Sbjct: 359  SPLNSSGSSEDEMISVGNSEEDSLAMNESLYVREANRLLDDLGPRYVDWWWPKPLPVNAD 418

Query: 1124 LLQEVVPGFKPPWRICLPGVRLKLTDDELTHFRMLARPLPTHFVLGRNRNLQGMAVAILK 1303
            LL EVVPGFKPP+R+C P  R KLTDDELT  R LAR LPTHFVLGRNR LQG+A A++K
Sbjct: 419  LLPEVVPGFKPPFRLCPPRSRSKLTDDELTQLRKLARSLPTHFVLGRNRKLQGLAAAVVK 478

Query: 1304 LWERCHIAKIALKVGVPNTDNEQMANEXXXXXXXXXXXRNKFLIIIYRGKDFLPPHVANI 1483
            LWE+CHIAKIALK G+PNT NE MANE           RNKF II+YRGKDFLP  VAN+
Sbjct: 479  LWEKCHIAKIALKWGIPNTSNELMANELKYLTGGVLLLRNKFFIILYRGKDFLPSQVANL 538

Query: 1484 VMERESDLRRYQHQEEAARLVPNEQILVPHELQGNSIS-GTLTEFQSIHSECMTLNNGNE 1660
            V ERE +L R Q +EE AR    E + +  E+  +S S GTL+EFQ+I         G E
Sbjct: 539  VAEREVELTRCQLEEEVARFKAIETLPITMEVSMSSSSVGTLSEFQTI------AEPGKE 592

Query: 1661 K--VELELRTQKEMIEKELRFERQKLFILKKKIKDSEKYLNKLNLAWQSSEPAADHEVLT 1834
            K  VE++L ++KE +EKELR ++  L ILKKKI+ S   L KLN AW+ ++   D E+LT
Sbjct: 593  KSEVEVQLMSEKERLEKELRNQQNNLHILKKKIEKSSIALGKLNAAWRPAKEDDDKEILT 652

Query: 1835 DEERECLRMIGLKMDSNLILGRRGVFDGVIEGLHQHWKNREVVKVITMQRRFPQITYAAK 2014
             EER  LR IGLKMD +L+LGRRGVFDGV+ GLHQHWK+REV+KVITMQ+ F Q+ + AK
Sbjct: 653  QEERRSLRQIGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVIKVITMQKIFSQVIHTAK 712

Query: 2015 LLTAESGGVLVSVDKLKEGHAIIIYRGKNYVRPALVQSKLPNKIDALRRSLLMQRIGSMK 2194
            LL  ESGG+L+SVDK+KEGHAIIIYRGKNY RP LV   L NK  AL RSL MQR+GS+K
Sbjct: 713  LLETESGGILISVDKIKEGHAIIIYRGKNYRRPELVPQNLLNKRQALCRSLEMQRLGSLK 772

Query: 2195 FFAKQKEQAISNLMDKMSALDEKI 2266
            F+A Q EQAIS+L  K+     KI
Sbjct: 773  FYANQTEQAISDLKLKLVEYTVKI 796


>XP_015169109.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Solanum tuberosum]
          Length = 788

 Score =  681 bits (1758), Expect = 0.0
 Identities = 378/733 (51%), Positives = 478/733 (65%), Gaps = 54/733 (7%)
 Frame = +2

Query: 197  NEESTEQD----ASFIKAPTAPWMKGPLLVQENQ-----RPTTKRDPKFLQFERTGKALF 349
            N E   QD    +S IK PTAPWM+GPLL++ NQ     +   K+D  F + +    AL 
Sbjct: 59   NLEFENQDYGSSSSGIKGPTAPWMRGPLLLEPNQFLDLSKSRKKKDANFAKTQNPNDALS 118

Query: 350  GKQGCGRGKKEMNKVYQGFEKLQRTHNSVHTQTPP---LEIKFKFSSQGLFGDTQNKLDK 520
            GK   GRGKK M  +YQG +KLQ T     TQ      +E +F   S   +GD   ++++
Sbjct: 119  GKVSGGRGKKAMKMIYQGIDKLQETQIGEGTQVETDAKVEFQFPPGSLSEWGDVSYEIEE 178

Query: 521  -----------------IGIDSK------------KMPWVKDDKLVIKRVKKERIMSSAE 613
                              G+ S+            KMPW  + ++V +R+KKE+++ +AE
Sbjct: 179  KNPYGEEDNVESLEGVEFGVLSREGEGRGSRKIGVKMPWESEVRIVYRRMKKEKVVMTAE 238

Query: 614  LNFDAFLLDRLXXXXXXXXXXXXXXXXXVNQSVIDQVRFIWRDNELAMLKFDLPLCRNME 793
             N DA LL+RL                 V ++V+DQ+ FIW++NELAMLKFDLPLCRNM+
Sbjct: 239  SNLDAMLLERLRGEAARIQKWVKVKKAGVTRTVVDQIHFIWKNNELAMLKFDLPLCRNMD 298

Query: 794  RAREITEIKTGGFVVWVNKDALFVYKGCNY--------HSGLNSH--SSMISNIQDTESQ 943
            RAREI E+KTGGFVVW+ ++AL VY+GC+Y        H  L SH  SS   NI+ T   
Sbjct: 299  RAREIVEMKTGGFVVWMKQNALVVYRGCSYTLQQKELQHDFLCSHQNSSFTENIKQTSIF 358

Query: 944  HEVNCHDQSQDEMLGKTENDGSNLLISGTLYDREADRLLDGLGPRFIDWWGRKPLPVDAD 1123
              +N    S+DEM+    ++  +L ++ +LY REA+RLLD LGPR++DWW  KPLPV+AD
Sbjct: 359  SPLNSSGSSEDEMISVGNSEEDSLAMNESLYVREANRLLDDLGPRYVDWWWPKPLPVNAD 418

Query: 1124 LLQEVVPGFKPPWRICLPGVRLKLTDDELTHFRMLARPLPTHFVLGRNRNLQGMAVAILK 1303
            LL EVVPGFKPP+R+C P  R KLTDDELT  R LAR LPTHFVLGRNR LQG+A A++K
Sbjct: 419  LLPEVVPGFKPPFRLCPPRSRSKLTDDELTQLRKLARSLPTHFVLGRNRKLQGLAAAVVK 478

Query: 1304 LWERCHIAKIALKVGVPNTDNEQMANEXXXXXXXXXXXRNKFLIIIYRGKDFLPPHVANI 1483
            LWE+CHIAKIALK G+PNT NE MANE           RNKF II+YRGKDFLP  VAN+
Sbjct: 479  LWEKCHIAKIALKWGIPNTSNELMANELKYLTGGVLLLRNKFFIILYRGKDFLPSQVANL 538

Query: 1484 VMERESDLRRYQHQEEAARLVPNEQILVPHELQGNSIS-GTLTEFQSIHSECMTLNNGNE 1660
            V ERE +L R Q +EE AR    E + +  E+  +S S GTL+EFQ+I         G E
Sbjct: 539  VAEREVELTRCQLEEEVARFKAIETLPITMEVSMSSSSVGTLSEFQTI------AEPGKE 592

Query: 1661 K--VELELRTQKEMIEKELRFERQKLFILKKKIKDSEKYLNKLNLAWQSSEPAADHEVLT 1834
            K  VE++L ++KE +EKELR ++  L ILKKKI+ S   L KLN AW+ ++   D E+LT
Sbjct: 593  KSEVEVQLMSEKERLEKELRNQQNNLHILKKKIEKSSIALGKLNAAWRPAKEDDDKEILT 652

Query: 1835 DEERECLRMIGLKMDSNLILGRRGVFDGVIEGLHQHWKNREVVKVITMQRRFPQITYAAK 2014
             EER  LR IGLKMD +L+LGRRGVFDGV+ GLHQHWK+REV+KVITMQ+ F Q+ + AK
Sbjct: 653  QEERRSLRQIGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVIKVITMQKIFSQVIHTAK 712

Query: 2015 LLTAESGGVLVSVDKLKEGHAIIIYRGKNYVRPALVQSKLPNKIDALRRSLLMQRIGSMK 2194
            LL  ESGG+L+SVDK+KEGHAIIIYRGKNY RP LV   L NK  AL RSL MQR+GS+K
Sbjct: 713  LLETESGGILISVDKIKEGHAIIIYRGKNYRRPELVPQNLLNKRQALCRSLEMQRLGSLK 772

Query: 2195 FFAKQKEQAISNL 2233
            F+A Q EQAIS+L
Sbjct: 773  FYANQTEQAISDL 785


>XP_016435862.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like, partial [Nicotiana tabacum]
          Length = 751

 Score =  679 bits (1753), Expect = 0.0
 Identities = 379/730 (51%), Positives = 477/730 (65%), Gaps = 51/730 (6%)
 Frame = +2

Query: 230  IKAPTAPWMKGPLLVQENQ-----RPTTKRDPKFLQFERTGKALFGKQGCGRGKKEMNKV 394
            IK PTAPWM+GPLLV+ NQ     +   K+D  F + +    AL GK   GRGKK M K+
Sbjct: 18   IKGPTAPWMRGPLLVEPNQVLDLSKSRKKKDANFAKTQNPSDALSGKVSGGRGKKAMKKI 77

Query: 395  YQGFEKLQRTHNSVHT----------QTPP------LEIKFKFSSQGLFGDTQNKLDKIG 526
            YQ  +KLQ T N   T          Q PP       ++ F F+ Q  +   ++K++++ 
Sbjct: 78   YQSIDKLQETQNLEFTHVETDAKFEFQFPPGSLTHWKDVNFDFNEQTPYVK-KDKVERVE 136

Query: 527  ID--------------SKKMPWVKDDKLVIKRVKKERIMSSAELNFDAFLLDRLXXXXXX 664
             D               +KMPW  +++ V +R+KKE+++++AEL  DA LL+RL      
Sbjct: 137  FDILSRENEGRGNRRSGEKMPWESEERFVYRRMKKEKVLTAAELKLDAMLLERLRGEAVK 196

Query: 665  XXXXXXXXXXXVNQSVIDQVRFIWRDNELAMLKFDLPLCRNMERAREITEIKTGGFVVWV 844
                       V ++V+DQ+  +W++NELAMLKFDLPLCRNM+RA+EI E+KTGGFVVW 
Sbjct: 197  IQKWVKVKKAGVTRAVVDQIHLLWKNNELAMLKFDLPLCRNMDRAQEIIEMKTGGFVVWR 256

Query: 845  NKDALFVYKGCNY-----------HSGLNS--HSSMISNIQDTESQHEVNCHDQSQDEML 985
             K+AL VY+GC+Y           H  L S  ++S     + T +    N    S D + 
Sbjct: 257  KKNALVVYRGCDYTLRQKDDPKRHHDFLRSQQNNSSTYTFKKTSAFSSSNSSRSSVDVIS 316

Query: 986  GKTENDGSNLLISGTLYDREADRLLDGLGPRFIDWWGRKPLPVDADLLQEVVPGFKPPWR 1165
            G++  + S L I+ +LY+REA+RLLD LGPR++DWW  KPLPVDADLL EVVPGFKPP+R
Sbjct: 317  GESSEEDS-LTINESLYEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVVPGFKPPFR 375

Query: 1166 ICLPGVRLKLTDDELTHFRMLARPLPTHFVLGRNRNLQGMAVAILKLWERCHIAKIALKV 1345
            +C P  R KLTDDELTH R LAR LPTHFVLGRNR LQG+A AI+KLWE+CHIAKIALK 
Sbjct: 376  LCPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLAAAIIKLWEKCHIAKIALKW 435

Query: 1346 GVPNTDNEQMANEXXXXXXXXXXXRNKFLIIIYRGKDFLPPHVANIVMERESDLRRYQHQ 1525
            G+PNT+NE MANE           RNKF II+YRGKDFLP  VA++V ERE +LRR Q +
Sbjct: 436  GIPNTNNELMANELKYLTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREVELRRCQLE 495

Query: 1526 EEAARLVPNEQI-LVPHELQGNSISGTLTEFQSIHSECMTLNNGNEK--VELELRTQKEM 1696
            EEAAR    E + +   E    S  GTL+EFQ+I         G EK   E++L  +KE 
Sbjct: 496  EEAARFKAIETLPITTGESMSISNVGTLSEFQTI------AEPGREKSETEVQLVAEKER 549

Query: 1697 IEKELRFERQKLFILKKKIKDSEKYLNKLNLAWQSSEPAADHEVLTDEERECLRMIGLKM 1876
            +EKELR E+  L+ILKKKI+ S   L KL+ AW+ ++P  D E+LT EER  LR IGLKM
Sbjct: 550  LEKELRDEQHSLYILKKKIEKSSIALGKLDAAWRPAKPDVDKEILTQEERRSLRQIGLKM 609

Query: 1877 DSNLILGRRGVFDGVIEGLHQHWKNREVVKVITMQRRFPQITYAAKLLTAESGGVLVSVD 2056
            D +L+LGRRGVFDGV+ GLHQHWK+REVVKVITMQ+ F Q+ + A LL AESGG+LVSVD
Sbjct: 610  DRSLVLGRRGVFDGVLAGLHQHWKHREVVKVITMQKIFSQVIHTANLLEAESGGILVSVD 669

Query: 2057 KLKEGHAIIIYRGKNYVRPALVQSKLPNKIDALRRSLLMQRIGSMKFFAKQKEQAISNLM 2236
            KLKEGHAIIIYRGKNY RP LV   L NK  AL RSL MQR+GS+KF+A Q EQAIS+L 
Sbjct: 670  KLKEGHAIIIYRGKNYRRPELVPQNLLNKRLALSRSLEMQRLGSLKFYANQTEQAISDLK 729

Query: 2237 DKMSALDEKI 2266
             K+     KI
Sbjct: 730  CKLVEYTVKI 739


>XP_016560772.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Capsicum annuum]
          Length = 802

 Score =  681 bits (1757), Expect = 0.0
 Identities = 373/732 (50%), Positives = 480/732 (65%), Gaps = 50/732 (6%)
 Frame = +2

Query: 221  ASFIKAPTAPWMKGPLLVQENQ-----RPTTKRDPKFLQFERTGKALFGKQGCGRGKKEM 385
            +S IK PTAPWMKGPLLV+ NQ     +   K+D  F + +    AL GK   GRGK+ M
Sbjct: 71   SSVIKGPTAPWMKGPLLVELNQVLDLSKSRKKKDSNFAKTQHPIDALSGKVSGGRGKRAM 130

Query: 386  NKVYQGFEKLQRTHN----------SVHTQTPP------LEIKFKFSSQGLFG--DTQNK 511
             K+YQG +KLQ T N           V  Q PP       E++ +F  +  +G  D   +
Sbjct: 131  KKIYQGIDKLQETQNLEFTELETDGKVKFQFPPGCLAEWEEVRVEFDEENPYGNQDDVER 190

Query: 512  LDKIGIDSK--------------KMPWVKDDKLVIKRVKKERIMSSAELNFDAFLLDRLX 649
            L+ +  D+               +MPW  ++++V +R+KK ++++SAE   DA LL+RL 
Sbjct: 191  LEGLEFDALSRESEGNGNRKSGGRMPWESEERIVYRRMKKAKVLTSAESKLDAMLLERLR 250

Query: 650  XXXXXXXXXXXXXXXXVNQSVIDQVRFIWRDNELAMLKFDLPLCRNMERAREITEIKTGG 829
                            V ++V+DQ+  +W++NELAMLKFDLPLCRNM+RAREI E+KTGG
Sbjct: 251  GEAERIQKWVKVKKAGVTRAVVDQIHLVWKNNELAMLKFDLPLCRNMDRAREIVEMKTGG 310

Query: 830  FVVWVNKDALFVYKGCNY--------HSGL--NSHSSMISNIQDTESQHEVNCHDQSQDE 979
             VVW  K+ L VY+GC+Y        H  L    +SS   N+++T     VN    S+DE
Sbjct: 311  IVVWGKKNTLVVYRGCDYTLRQKELHHDFLCCQQNSSFTENVKETSIFSSVNSSGSSEDE 370

Query: 980  MLGKTENDGSNLLISGTLYDREADRLLDGLGPRFIDWWGRKPLPVDADLLQEVVPGFKPP 1159
            M+   +++   L ++ +LY+REA+RLLD LGPR++DWW  KPLPVDADLL EVVPGFKPP
Sbjct: 371  MISGEKSEEDGLAMNESLYEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVVPGFKPP 430

Query: 1160 WRICLPGVRLKLTDDELTHFRMLARPLPTHFVLGRNRNLQGMAVAILKLWERCHIAKIAL 1339
            +R+C P  R KLTDDELTH R LAR LPTHFVLGRNR LQG+A A++KLWE+CHIAKIAL
Sbjct: 431  FRLCPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLAAAVVKLWEKCHIAKIAL 490

Query: 1340 KVGVPNTDNEQMANEXXXXXXXXXXXRNKFLIIIYRGKDFLPPHVANIVMERESDLRRYQ 1519
            K G+PNT NE MANE           RNKF II+YRGKDFLP  VA++V ERE++L R Q
Sbjct: 491  KWGIPNTSNELMANELKSLTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREAELTRCQ 550

Query: 1520 HQEEAARLVPNEQILVPHELQGNSIS-GTLTEFQSIHSECMTLNNGNEK--VELELRTQK 1690
             +EE AR    E + +  E+  +S + GTL+EFQ+I         G EK  +E++L  +K
Sbjct: 551  LEEEVARFKAIETLPITTEVSMSSSNVGTLSEFQTI------AEPGKEKSEIEVQLVAKK 604

Query: 1691 EMIEKELRFERQKLFILKKKIKDSEKYLNKLNLAWQSSEPAADHEVLTDEERECLRMIGL 1870
            E +EKELR ++  L+ILKKKI+ S   L KLN AW+ ++   D E+LT EE+  LR IGL
Sbjct: 605  ESLEKELRNQQHSLYILKKKIEKSSIALGKLNAAWRPAKQDDDKEILTQEEKLSLRQIGL 664

Query: 1871 KMDSNLILGRRGVFDGVIEGLHQHWKNREVVKVITMQRRFPQITYAAKLLTAESGGVLVS 2050
            KMD +L+LGRR VFDGV+ GLHQHWK+REVVKVITMQ+ F Q+ + AK L AESGG+L+S
Sbjct: 665  KMDRSLVLGRRCVFDGVLAGLHQHWKHREVVKVITMQKFFSQVIHTAKHLEAESGGILIS 724

Query: 2051 VDKLKEGHAIIIYRGKNYVRPALVQSKLPNKIDALRRSLLMQRIGSMKFFAKQKEQAISN 2230
            VDKLKEGHAIIIYRGKNY RP LV+  L NK  AL RSL MQR+GS+KF+A Q EQAIS+
Sbjct: 725  VDKLKEGHAIIIYRGKNYRRPELVRQNLLNKRQALSRSLEMQRLGSLKFYANQTEQAISD 784

Query: 2231 LMDKMSALDEKI 2266
            L  K+     KI
Sbjct: 785  LKCKLVEYTVKI 796


>XP_016560773.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Capsicum annuum]
          Length = 792

 Score =  681 bits (1756), Expect = 0.0
 Identities = 371/726 (51%), Positives = 479/726 (65%), Gaps = 50/726 (6%)
 Frame = +2

Query: 221  ASFIKAPTAPWMKGPLLVQENQ-----RPTTKRDPKFLQFERTGKALFGKQGCGRGKKEM 385
            +S IK PTAPWMKGPLLV+ NQ     +   K+D  F + +    AL GK   GRGK+ M
Sbjct: 71   SSVIKGPTAPWMKGPLLVELNQVLDLSKSRKKKDSNFAKTQHPIDALSGKVSGGRGKRAM 130

Query: 386  NKVYQGFEKLQRTHN----------SVHTQTPP------LEIKFKFSSQGLFG--DTQNK 511
             K+YQG +KLQ T N           V  Q PP       E++ +F  +  +G  D   +
Sbjct: 131  KKIYQGIDKLQETQNLEFTELETDGKVKFQFPPGCLAEWEEVRVEFDEENPYGNQDDVER 190

Query: 512  LDKIGIDSK--------------KMPWVKDDKLVIKRVKKERIMSSAELNFDAFLLDRLX 649
            L+ +  D+               +MPW  ++++V +R+KK ++++SAE   DA LL+RL 
Sbjct: 191  LEGLEFDALSRESEGNGNRKSGGRMPWESEERIVYRRMKKAKVLTSAESKLDAMLLERLR 250

Query: 650  XXXXXXXXXXXXXXXXVNQSVIDQVRFIWRDNELAMLKFDLPLCRNMERAREITEIKTGG 829
                            V ++V+DQ+  +W++NELAMLKFDLPLCRNM+RAREI E+KTGG
Sbjct: 251  GEAERIQKWVKVKKAGVTRAVVDQIHLVWKNNELAMLKFDLPLCRNMDRAREIVEMKTGG 310

Query: 830  FVVWVNKDALFVYKGCNY--------HSGL--NSHSSMISNIQDTESQHEVNCHDQSQDE 979
             VVW  K+ L VY+GC+Y        H  L    +SS   N+++T     VN    S+DE
Sbjct: 311  IVVWGKKNTLVVYRGCDYTLRQKELHHDFLCCQQNSSFTENVKETSIFSSVNSSGSSEDE 370

Query: 980  MLGKTENDGSNLLISGTLYDREADRLLDGLGPRFIDWWGRKPLPVDADLLQEVVPGFKPP 1159
            M+   +++   L ++ +LY+REA+RLLD LGPR++DWW  KPLPVDADLL EVVPGFKPP
Sbjct: 371  MISGEKSEEDGLAMNESLYEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVVPGFKPP 430

Query: 1160 WRICLPGVRLKLTDDELTHFRMLARPLPTHFVLGRNRNLQGMAVAILKLWERCHIAKIAL 1339
            +R+C P  R KLTDDELTH R LAR LPTHFVLGRNR LQG+A A++KLWE+CHIAKIAL
Sbjct: 431  FRLCPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLAAAVVKLWEKCHIAKIAL 490

Query: 1340 KVGVPNTDNEQMANEXXXXXXXXXXXRNKFLIIIYRGKDFLPPHVANIVMERESDLRRYQ 1519
            K G+PNT NE MANE           RNKF II+YRGKDFLP  VA++V ERE++L R Q
Sbjct: 491  KWGIPNTSNELMANELKSLTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREAELTRCQ 550

Query: 1520 HQEEAARLVPNEQILVPHELQGNSIS-GTLTEFQSIHSECMTLNNGNEK--VELELRTQK 1690
             +EE AR    E + +  E+  +S + GTL+EFQ+I         G EK  +E++L  +K
Sbjct: 551  LEEEVARFKAIETLPITTEVSMSSSNVGTLSEFQTI------AEPGKEKSEIEVQLVAKK 604

Query: 1691 EMIEKELRFERQKLFILKKKIKDSEKYLNKLNLAWQSSEPAADHEVLTDEERECLRMIGL 1870
            E +EKELR ++  L+ILKKKI+ S   L KLN AW+ ++   D E+LT EE+  LR IGL
Sbjct: 605  ESLEKELRNQQHSLYILKKKIEKSSIALGKLNAAWRPAKQDDDKEILTQEEKLSLRQIGL 664

Query: 1871 KMDSNLILGRRGVFDGVIEGLHQHWKNREVVKVITMQRRFPQITYAAKLLTAESGGVLVS 2050
            KMD +L+LGRR VFDGV+ GLHQHWK+REVVKVITMQ+ F Q+ + AK L AESGG+L+S
Sbjct: 665  KMDRSLVLGRRCVFDGVLAGLHQHWKHREVVKVITMQKFFSQVIHTAKHLEAESGGILIS 724

Query: 2051 VDKLKEGHAIIIYRGKNYVRPALVQSKLPNKIDALRRSLLMQRIGSMKFFAKQKEQAISN 2230
            VDKLKEGHAIIIYRGKNY RP LV+  L NK  AL RSL MQR+GS+KF+A Q EQAIS+
Sbjct: 725  VDKLKEGHAIIIYRGKNYRRPELVRQNLLNKRQALSRSLEMQRLGSLKFYANQTEQAISD 784

Query: 2231 LMDKMS 2248
            L  K++
Sbjct: 785  LKCKLN 790


>XP_019262115.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Nicotiana attenuata] OIT38049.1
            chloroplastic group iia intron splicing facilitator crs1,
            chloroplastic [Nicotiana attenuata]
          Length = 812

 Score =  681 bits (1757), Expect = 0.0
 Identities = 379/735 (51%), Positives = 478/735 (65%), Gaps = 51/735 (6%)
 Frame = +2

Query: 215  QDASFIKAPTAPWMKGPLLVQENQ-----RPTTKRDPKFLQFERTGKALFGKQGCGRGKK 379
            + +S IK PTAPWM+GPLLV+ NQ     +   K+D  F + +    +L GK   GRGKK
Sbjct: 77   RSSSGIKGPTAPWMRGPLLVEPNQVVDLSKSRKKKDANFTKTQNPSDSLSGKVSGGRGKK 136

Query: 380  EMNKVYQGFEKLQRTHNSVHT----------QTPPL------EIKFKFSSQGLFGDTQNK 511
             M K+YQ  +KLQ T N   T          Q PP       ++ F+F+ Q  +     K
Sbjct: 137  AMKKIYQSIDKLQETQNLEFTHVETDAKFEFQFPPASLTHWKDVNFQFNEQTPYV----K 192

Query: 512  LDKIGID--------------SKKMPWVKDDKLVIKRVKKERIMSSAELNFDAFLLDRLX 649
             DK+  D               +KMPW  ++++V +R+KKE+++++AEL  DA LL+RL 
Sbjct: 193  KDKVEFDILSRENEGSGNRRSGEKMPWESEERIVYRRMKKEKVLTAAELKLDAMLLERLR 252

Query: 650  XXXXXXXXXXXXXXXXVNQSVIDQVRFIWRDNELAMLKFDLPLCRNMERAREITEIKTGG 829
                            V Q+V+ Q+  +W++NELAMLKFDLPLCRNM+RA+EI E+KTGG
Sbjct: 253  GEAAQIQKWVKVKKAGVTQAVVHQIHLLWKNNELAMLKFDLPLCRNMDRAQEIIEMKTGG 312

Query: 830  FVVWVNKDALFVYKGCNY-----------HSGLNS--HSSMISNIQDTESQHEVNCHDQS 970
            FVVW  K+AL VY+GC+Y           H  + S  +SS     + T +    N    S
Sbjct: 313  FVVWRKKNALVVYRGCDYTLRLKDDPKRLHDFIRSQQNSSSTDTFKKTSAFLSSNSSRSS 372

Query: 971  QDEMLGKTENDGSNLLISGTLYDREADRLLDGLGPRFIDWWGRKPLPVDADLLQEVVPGF 1150
             D + G++  + S L I+ +LY+REA+RLLD LGPR++DWW  KPLPVDADLL EVVPGF
Sbjct: 373  VDVISGESSEEDS-LTINESLYEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVVPGF 431

Query: 1151 KPPWRICLPGVRLKLTDDELTHFRMLARPLPTHFVLGRNRNLQGMAVAILKLWERCHIAK 1330
            KPP+R+C P  R KLTDDELTH R LAR LPTHFVLGRNR LQG+A A++KLWE+CHIAK
Sbjct: 432  KPPFRLCPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLAAAVIKLWEKCHIAK 491

Query: 1331 IALKVGVPNTDNEQMANEXXXXXXXXXXXRNKFLIIIYRGKDFLPPHVANIVMERESDLR 1510
            IALK G+PNT+NE MANE           RNKF II+YRGKDFLP  VA++V ERE +LR
Sbjct: 492  IALKWGIPNTNNELMANELKYLTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREVELR 551

Query: 1511 RYQHQEEAARLVPNEQI-LVPHELQGNSISGTLTEFQSIHSECMTLNNGNEK--VELELR 1681
            R Q +EEAAR    E + +   E   +S  G L+EFQ+I         G EK   E++L 
Sbjct: 552  RCQLEEEAARFKAIETLPITTGESMSSSNVGPLSEFQTI------AEPGREKSETEVQLV 605

Query: 1682 TQKEMIEKELRFERQKLFILKKKIKDSEKYLNKLNLAWQSSEPAADHEVLTDEERECLRM 1861
             +KE +EKELR E+  L+ILKKKI+ S   L KL+ AW+ ++P  D E+LT EER  LR 
Sbjct: 606  AEKERLEKELRDEQHSLYILKKKIEKSSIALGKLDAAWRPAKPDVDKEILTQEERRSLRQ 665

Query: 1862 IGLKMDSNLILGRRGVFDGVIEGLHQHWKNREVVKVITMQRRFPQITYAAKLLTAESGGV 2041
            IGLKMD +L+LGRRGVFDGV+ GLHQHWK+REVVKVITMQ+ F Q+ + A LL AESGG+
Sbjct: 666  IGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVVKVITMQKIFSQVIHTANLLEAESGGI 725

Query: 2042 LVSVDKLKEGHAIIIYRGKNYVRPALVQSKLPNKIDALRRSLLMQRIGSMKFFAKQKEQA 2221
            LVSVDKLKEGHAIIIYRGKNY RP LV   L NK  AL RSL MQR+GS+KF+A Q EQA
Sbjct: 726  LVSVDKLKEGHAIIIYRGKNYRRPELVPQNLLNKRQALSRSLEMQRLGSLKFYANQTEQA 785

Query: 2222 ISNLMDKMSALDEKI 2266
            IS+L  K+     KI
Sbjct: 786  ISDLKCKLVEYTVKI 800


>XP_009598916.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Nicotiana tomentosiformis]
            XP_009598917.1 PREDICTED: chloroplastic group IIA intron
            splicing facilitator CRS1, chloroplastic isoform X1
            [Nicotiana tomentosiformis]
          Length = 815

 Score =  681 bits (1756), Expect = 0.0
 Identities = 380/735 (51%), Positives = 480/735 (65%), Gaps = 51/735 (6%)
 Frame = +2

Query: 215  QDASFIKAPTAPWMKGPLLVQENQ-----RPTTKRDPKFLQFERTGKALFGKQGCGRGKK 379
            + +S IK PTAPWM+GPLLV+ NQ     +   K+D  F + +    AL GK   GRGKK
Sbjct: 77   RSSSGIKGPTAPWMRGPLLVEPNQVLDLSKSRKKKDANFAKTQNPNDALSGKVSGGRGKK 136

Query: 380  EMNKVYQGFEKLQRTHNSVHT----------QTPP------LEIKFKFSSQGLFGDTQNK 511
             M K+YQ  +KLQ T N   T          Q PP       ++ F F+ Q  +   ++K
Sbjct: 137  AMKKIYQSIDKLQETQNLEFTHVETDAKFEFQFPPGSLTHWKDVNFDFNEQTPYVK-KDK 195

Query: 512  LDKIGID--------------SKKMPWVKDDKLVIKRVKKERIMSSAELNFDAFLLDRLX 649
            ++++  D               +KMPW  +++ V +R+KKE+++++AEL  DA LL+RL 
Sbjct: 196  VERVEFDILSRENEGRGNRRSGEKMPWESEERFVYRRMKKEKVLTAAELKLDAMLLERLR 255

Query: 650  XXXXXXXXXXXXXXXXVNQSVIDQVRFIWRDNELAMLKFDLPLCRNMERAREITEIKTGG 829
                            V ++V+DQ+  +W++NELAMLKFDLPLCRNM+RA+EI E+KTGG
Sbjct: 256  GEAVKIQKWVKVKKAGVTRAVVDQIHLLWKNNELAMLKFDLPLCRNMDRAQEIIEMKTGG 315

Query: 830  FVVWVNKDALFVYKGCNY-----------HSGLNS--HSSMISNIQDTESQHEVNCHDQS 970
            FVVW  K+AL VY+GC+Y           H  L S  ++S     + T +    N    S
Sbjct: 316  FVVWRKKNALVVYRGCDYTLRQKDDPKRHHDFLRSQQNNSSTYTFKKTSAFSSSNSSRSS 375

Query: 971  QDEMLGKTENDGSNLLISGTLYDREADRLLDGLGPRFIDWWGRKPLPVDADLLQEVVPGF 1150
             D + G++  + S L I+ +LY+REA+RLLD LGPR++DWW  KPLPVDADLL EVVPGF
Sbjct: 376  VDVISGESSEEDS-LTINESLYEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVVPGF 434

Query: 1151 KPPWRICLPGVRLKLTDDELTHFRMLARPLPTHFVLGRNRNLQGMAVAILKLWERCHIAK 1330
            KPP+R+C P  R KLTDDELTH R LAR LPTHFVLGRNR LQG+A AI+KLWE+CHIAK
Sbjct: 435  KPPFRLCPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLAAAIIKLWEKCHIAK 494

Query: 1331 IALKVGVPNTDNEQMANEXXXXXXXXXXXRNKFLIIIYRGKDFLPPHVANIVMERESDLR 1510
            IALK G+PNT+NE MANE           RNKF II+YRGKDFLP  VA++V ERE +LR
Sbjct: 495  IALKWGIPNTNNELMANELKYLTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREVELR 554

Query: 1511 RYQHQEEAARLVPNEQI-LVPHELQGNSISGTLTEFQSIHSECMTLNNGNEK--VELELR 1681
            R Q +EEAAR    E + +   E    S  GTL+EFQ+I         G EK   E++L 
Sbjct: 555  RCQLEEEAARFKAIETLPITTGESMSISNVGTLSEFQTI------AEPGREKSETEVQLV 608

Query: 1682 TQKEMIEKELRFERQKLFILKKKIKDSEKYLNKLNLAWQSSEPAADHEVLTDEERECLRM 1861
             +KE +EKELR E+  L+ILKKKI+ S   L KL+ AW+ ++P  D E+LT EER  LR 
Sbjct: 609  AEKERLEKELRDEQHSLYILKKKIEKSSIALGKLDAAWRPAKPDVDKEILTQEERRSLRQ 668

Query: 1862 IGLKMDSNLILGRRGVFDGVIEGLHQHWKNREVVKVITMQRRFPQITYAAKLLTAESGGV 2041
            IGLKMD +L+LGRRGVFDGV+ GLHQHWK+REVVKVITMQ+ F Q+ + A LL AESGG+
Sbjct: 669  IGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVVKVITMQKIFSQVIHTANLLEAESGGI 728

Query: 2042 LVSVDKLKEGHAIIIYRGKNYVRPALVQSKLPNKIDALRRSLLMQRIGSMKFFAKQKEQA 2221
            LVSVDKLKEGHAIIIYRGKNY RP LV   L NK  AL RSL MQR+GS+KF+A Q EQA
Sbjct: 729  LVSVDKLKEGHAIIIYRGKNYRRPELVPQNLLNKRLALSRSLEMQRLGSLKFYANQTEQA 788

Query: 2222 ISNLMDKMSALDEKI 2266
            IS+L  K+     KI
Sbjct: 789  ISDLKCKLVEYTVKI 803


>XP_019262116.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Nicotiana attenuata]
          Length = 792

 Score =  679 bits (1753), Expect = 0.0
 Identities = 377/727 (51%), Positives = 475/727 (65%), Gaps = 51/727 (7%)
 Frame = +2

Query: 215  QDASFIKAPTAPWMKGPLLVQENQ-----RPTTKRDPKFLQFERTGKALFGKQGCGRGKK 379
            + +S IK PTAPWM+GPLLV+ NQ     +   K+D  F + +    +L GK   GRGKK
Sbjct: 77   RSSSGIKGPTAPWMRGPLLVEPNQVVDLSKSRKKKDANFTKTQNPSDSLSGKVSGGRGKK 136

Query: 380  EMNKVYQGFEKLQRTHNSVHT----------QTPPL------EIKFKFSSQGLFGDTQNK 511
             M K+YQ  +KLQ T N   T          Q PP       ++ F+F+ Q  +     K
Sbjct: 137  AMKKIYQSIDKLQETQNLEFTHVETDAKFEFQFPPASLTHWKDVNFQFNEQTPYV----K 192

Query: 512  LDKIGID--------------SKKMPWVKDDKLVIKRVKKERIMSSAELNFDAFLLDRLX 649
             DK+  D               +KMPW  ++++V +R+KKE+++++AEL  DA LL+RL 
Sbjct: 193  KDKVEFDILSRENEGSGNRRSGEKMPWESEERIVYRRMKKEKVLTAAELKLDAMLLERLR 252

Query: 650  XXXXXXXXXXXXXXXXVNQSVIDQVRFIWRDNELAMLKFDLPLCRNMERAREITEIKTGG 829
                            V Q+V+ Q+  +W++NELAMLKFDLPLCRNM+RA+EI E+KTGG
Sbjct: 253  GEAAQIQKWVKVKKAGVTQAVVHQIHLLWKNNELAMLKFDLPLCRNMDRAQEIIEMKTGG 312

Query: 830  FVVWVNKDALFVYKGCNY-----------HSGLNS--HSSMISNIQDTESQHEVNCHDQS 970
            FVVW  K+AL VY+GC+Y           H  + S  +SS     + T +    N    S
Sbjct: 313  FVVWRKKNALVVYRGCDYTLRLKDDPKRLHDFIRSQQNSSSTDTFKKTSAFLSSNSSRSS 372

Query: 971  QDEMLGKTENDGSNLLISGTLYDREADRLLDGLGPRFIDWWGRKPLPVDADLLQEVVPGF 1150
             D + G++  + S L I+ +LY+REA+RLLD LGPR++DWW  KPLPVDADLL EVVPGF
Sbjct: 373  VDVISGESSEEDS-LTINESLYEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVVPGF 431

Query: 1151 KPPWRICLPGVRLKLTDDELTHFRMLARPLPTHFVLGRNRNLQGMAVAILKLWERCHIAK 1330
            KPP+R+C P  R KLTDDELTH R LAR LPTHFVLGRNR LQG+A A++KLWE+CHIAK
Sbjct: 432  KPPFRLCPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLAAAVIKLWEKCHIAK 491

Query: 1331 IALKVGVPNTDNEQMANEXXXXXXXXXXXRNKFLIIIYRGKDFLPPHVANIVMERESDLR 1510
            IALK G+PNT+NE MANE           RNKF II+YRGKDFLP  VA++V ERE +LR
Sbjct: 492  IALKWGIPNTNNELMANELKYLTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREVELR 551

Query: 1511 RYQHQEEAARLVPNEQI-LVPHELQGNSISGTLTEFQSIHSECMTLNNGNEK--VELELR 1681
            R Q +EEAAR    E + +   E   +S  G L+EFQ+I         G EK   E++L 
Sbjct: 552  RCQLEEEAARFKAIETLPITTGESMSSSNVGPLSEFQTI------AEPGREKSETEVQLV 605

Query: 1682 TQKEMIEKELRFERQKLFILKKKIKDSEKYLNKLNLAWQSSEPAADHEVLTDEERECLRM 1861
             +KE +EKELR E+  L+ILKKKI+ S   L KL+ AW+ ++P  D E+LT EER  LR 
Sbjct: 606  AEKERLEKELRDEQHSLYILKKKIEKSSIALGKLDAAWRPAKPDVDKEILTQEERRSLRQ 665

Query: 1862 IGLKMDSNLILGRRGVFDGVIEGLHQHWKNREVVKVITMQRRFPQITYAAKLLTAESGGV 2041
            IGLKMD +L+LGRRGVFDGV+ GLHQHWK+REVVKVITMQ+ F Q+ + A LL AESGG+
Sbjct: 666  IGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVVKVITMQKIFSQVIHTANLLEAESGGI 725

Query: 2042 LVSVDKLKEGHAIIIYRGKNYVRPALVQSKLPNKIDALRRSLLMQRIGSMKFFAKQKEQA 2221
            LVSVDKLKEGHAIIIYRGKNY RP LV   L NK  AL RSL MQR+GS+KF+A Q EQA
Sbjct: 726  LVSVDKLKEGHAIIIYRGKNYRRPELVPQNLLNKRQALSRSLEMQRLGSLKFYANQTEQA 785

Query: 2222 ISNLMDK 2242
            IS+L  K
Sbjct: 786  ISDLKCK 792


>XP_015065406.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Solanum pennellii]
            XP_015065407.1 PREDICTED: chloroplastic group IIA intron
            splicing facilitator CRS1, chloroplastic isoform X1
            [Solanum pennellii] XP_015065408.1 PREDICTED:
            chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Solanum pennellii]
            XP_015065409.1 PREDICTED: chloroplastic group IIA intron
            splicing facilitator CRS1, chloroplastic isoform X1
            [Solanum pennellii] XP_015065410.1 PREDICTED:
            chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Solanum pennellii]
          Length = 792

 Score =  679 bits (1752), Expect = 0.0
 Identities = 373/738 (50%), Positives = 484/738 (65%), Gaps = 54/738 (7%)
 Frame = +2

Query: 197  NEESTEQD----ASFIKAPTAPWMKGPLLVQENQ-----RPTTKRDPKFLQFERTGKALF 349
            N E   QD    +S IK PTAPWM+GPLL++ NQ     +   K+D    + +    AL 
Sbjct: 59   NLEFENQDYGSSSSGIKGPTAPWMRGPLLLEPNQVLDLSKSRKKKDNNLAKTQNPNDALS 118

Query: 350  GKQGCGRGKKEMNKVYQGFEKLQRTHNSVHTQTPP-LEIKFKFSSQGL--FGDTQNKLDK 520
            GK   GRGKK M  +YQG +KLQ T     TQ    ++++F+F    L  +GD   ++++
Sbjct: 119  GKVSGGRGKKAMKMIYQGIDKLQETQIGECTQVETDVKVEFQFPPGSLSEWGDVSYEIEE 178

Query: 521  -----------------IGIDSK------------KMPWVKDDKLVIKRVKKERIMSSAE 613
                              G+ S+            +MPW  ++++V +R+KKE+++ +AE
Sbjct: 179  KNPYGEEDNVESLEGVEFGVLSREGEGRGSRKSGARMPWESEERIVYRRMKKEKVVMTAE 238

Query: 614  LNFDAFLLDRLXXXXXXXXXXXXXXXXXVNQSVIDQVRFIWRDNELAMLKFDLPLCRNME 793
             N DA LL+RL                 V ++V+DQ++FIW++NELAMLKFDLPLCRNM+
Sbjct: 239  SNLDAMLLERLKGEAARIQKWVKVKKAGVTRTVVDQIQFIWKNNELAMLKFDLPLCRNMD 298

Query: 794  RAREITEIKTGGFVVWVNKDALFVYKGCNY--------HSGLNSHS--SMISNIQDTESQ 943
            RAREI E+KTGGFVVW+ ++AL VY+GC+Y        H  L SH   S   NI++T   
Sbjct: 299  RAREIVEMKTGGFVVWMKQNALVVYRGCSYTIQQKELQHDFLCSHQNPSFTENIEETSIF 358

Query: 944  HEVNCHDQSQDEMLGKTENDGSNLLISGTLYDREADRLLDGLGPRFIDWWGRKPLPVDAD 1123
              +N    S+DEM+    ++  +L+++ +LY+REA+RLLD LGPR++DWW  KPLPVDAD
Sbjct: 359  SPLNLSGSSEDEMISVGNSEEDSLVMNESLYEREANRLLDDLGPRYVDWWWPKPLPVDAD 418

Query: 1124 LLQEVVPGFKPPWRICLPGVRLKLTDDELTHFRMLARPLPTHFVLGRNRNLQGMAVAILK 1303
            LL EVVPGFKPP+R+C P  R KLTDDELT  R LAR LPTHFVLGRNR LQG+A A++K
Sbjct: 419  LLPEVVPGFKPPFRLCPPRSRSKLTDDELTQLRKLARSLPTHFVLGRNRKLQGLAAALVK 478

Query: 1304 LWERCHIAKIALKVGVPNTDNEQMANEXXXXXXXXXXXRNKFLIIIYRGKDFLPPHVANI 1483
            LWE+CHIAKIALK G+PN  NE MANE           RNKF II+YRGKDFLP  VA +
Sbjct: 479  LWEKCHIAKIALKWGIPNASNELMANELKYLTGGVLLLRNKFFIILYRGKDFLPSQVAKL 538

Query: 1484 VMERESDLRRYQHQEEAARLVPNEQILVPHEL-QGNSISGTLTEFQSIHSECMTLNNGNE 1660
            V ERE +L R Q +EE AR    E + +  E    +SI GTL+EFQ+I         G E
Sbjct: 539  VAEREVELTRCQLEEEVARFKAIETLPITMEASMSSSIVGTLSEFQTI------AEPGKE 592

Query: 1661 K--VELELRTQKEMIEKELRFERQKLFILKKKIKDSEKYLNKLNLAWQSSEPAADHEVLT 1834
            K  V ++L ++KE +EKE+R ++  L+ILKKKI+ S   L KLN AW+ ++   D E+LT
Sbjct: 593  KSEVAVQLMSEKERLEKEVRNQQHSLYILKKKIEKSSIALGKLNAAWRPAKEDDDKEILT 652

Query: 1835 DEERECLRMIGLKMDSNLILGRRGVFDGVIEGLHQHWKNREVVKVITMQRRFPQITYAAK 2014
             EER  LR IGLKMD +L+LGRRGVFDGV+ GLHQHWK+REV+KVITMQ+ F Q+ + AK
Sbjct: 653  QEERRSLRQIGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVIKVITMQKIFSQVIHTAK 712

Query: 2015 LLTAESGGVLVSVDKLKEGHAIIIYRGKNYVRPALVQSKLPNKIDALRRSLLMQRIGSMK 2194
            LL  ESGG+L+SVDK+KEGHAIIIYRGKNY RP LV   L NK  AL RSL MQR+GS+K
Sbjct: 713  LLETESGGILISVDKIKEGHAIIIYRGKNYRRPELVPQNLLNKRQALCRSLEMQRLGSLK 772

Query: 2195 FFAKQKEQAISNLMDKMS 2248
            F+A Q EQAIS+L  K++
Sbjct: 773  FYANQTEQAISDLKLKLN 790


>XP_009598920.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X3 [Nicotiana tomentosiformis]
          Length = 795

 Score =  679 bits (1752), Expect = 0.0
 Identities = 378/727 (51%), Positives = 477/727 (65%), Gaps = 51/727 (7%)
 Frame = +2

Query: 215  QDASFIKAPTAPWMKGPLLVQENQ-----RPTTKRDPKFLQFERTGKALFGKQGCGRGKK 379
            + +S IK PTAPWM+GPLLV+ NQ     +   K+D  F + +    AL GK   GRGKK
Sbjct: 77   RSSSGIKGPTAPWMRGPLLVEPNQVLDLSKSRKKKDANFAKTQNPNDALSGKVSGGRGKK 136

Query: 380  EMNKVYQGFEKLQRTHNSVHT----------QTPP------LEIKFKFSSQGLFGDTQNK 511
             M K+YQ  +KLQ T N   T          Q PP       ++ F F+ Q  +   ++K
Sbjct: 137  AMKKIYQSIDKLQETQNLEFTHVETDAKFEFQFPPGSLTHWKDVNFDFNEQTPYVK-KDK 195

Query: 512  LDKIGID--------------SKKMPWVKDDKLVIKRVKKERIMSSAELNFDAFLLDRLX 649
            ++++  D               +KMPW  +++ V +R+KKE+++++AEL  DA LL+RL 
Sbjct: 196  VERVEFDILSRENEGRGNRRSGEKMPWESEERFVYRRMKKEKVLTAAELKLDAMLLERLR 255

Query: 650  XXXXXXXXXXXXXXXXVNQSVIDQVRFIWRDNELAMLKFDLPLCRNMERAREITEIKTGG 829
                            V ++V+DQ+  +W++NELAMLKFDLPLCRNM+RA+EI E+KTGG
Sbjct: 256  GEAVKIQKWVKVKKAGVTRAVVDQIHLLWKNNELAMLKFDLPLCRNMDRAQEIIEMKTGG 315

Query: 830  FVVWVNKDALFVYKGCNY-----------HSGLNS--HSSMISNIQDTESQHEVNCHDQS 970
            FVVW  K+AL VY+GC+Y           H  L S  ++S     + T +    N    S
Sbjct: 316  FVVWRKKNALVVYRGCDYTLRQKDDPKRHHDFLRSQQNNSSTYTFKKTSAFSSSNSSRSS 375

Query: 971  QDEMLGKTENDGSNLLISGTLYDREADRLLDGLGPRFIDWWGRKPLPVDADLLQEVVPGF 1150
             D + G++  + S L I+ +LY+REA+RLLD LGPR++DWW  KPLPVDADLL EVVPGF
Sbjct: 376  VDVISGESSEEDS-LTINESLYEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVVPGF 434

Query: 1151 KPPWRICLPGVRLKLTDDELTHFRMLARPLPTHFVLGRNRNLQGMAVAILKLWERCHIAK 1330
            KPP+R+C P  R KLTDDELTH R LAR LPTHFVLGRNR LQG+A AI+KLWE+CHIAK
Sbjct: 435  KPPFRLCPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLAAAIIKLWEKCHIAK 494

Query: 1331 IALKVGVPNTDNEQMANEXXXXXXXXXXXRNKFLIIIYRGKDFLPPHVANIVMERESDLR 1510
            IALK G+PNT+NE MANE           RNKF II+YRGKDFLP  VA++V ERE +LR
Sbjct: 495  IALKWGIPNTNNELMANELKYLTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREVELR 554

Query: 1511 RYQHQEEAARLVPNEQI-LVPHELQGNSISGTLTEFQSIHSECMTLNNGNEK--VELELR 1681
            R Q +EEAAR    E + +   E    S  GTL+EFQ+I         G EK   E++L 
Sbjct: 555  RCQLEEEAARFKAIETLPITTGESMSISNVGTLSEFQTI------AEPGREKSETEVQLV 608

Query: 1682 TQKEMIEKELRFERQKLFILKKKIKDSEKYLNKLNLAWQSSEPAADHEVLTDEERECLRM 1861
             +KE +EKELR E+  L+ILKKKI+ S   L KL+ AW+ ++P  D E+LT EER  LR 
Sbjct: 609  AEKERLEKELRDEQHSLYILKKKIEKSSIALGKLDAAWRPAKPDVDKEILTQEERRSLRQ 668

Query: 1862 IGLKMDSNLILGRRGVFDGVIEGLHQHWKNREVVKVITMQRRFPQITYAAKLLTAESGGV 2041
            IGLKMD +L+LGRRGVFDGV+ GLHQHWK+REVVKVITMQ+ F Q+ + A LL AESGG+
Sbjct: 669  IGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVVKVITMQKIFSQVIHTANLLEAESGGI 728

Query: 2042 LVSVDKLKEGHAIIIYRGKNYVRPALVQSKLPNKIDALRRSLLMQRIGSMKFFAKQKEQA 2221
            LVSVDKLKEGHAIIIYRGKNY RP LV   L NK  AL RSL MQR+GS+KF+A Q EQA
Sbjct: 729  LVSVDKLKEGHAIIIYRGKNYRRPELVPQNLLNKRLALSRSLEMQRLGSLKFYANQTEQA 788

Query: 2222 ISNLMDK 2242
            IS+L  K
Sbjct: 789  ISDLKCK 795


>XP_015065411.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Solanum pennellii]
          Length = 789

 Score =  679 bits (1751), Expect = 0.0
 Identities = 373/737 (50%), Positives = 483/737 (65%), Gaps = 54/737 (7%)
 Frame = +2

Query: 197  NEESTEQD----ASFIKAPTAPWMKGPLLVQENQ-----RPTTKRDPKFLQFERTGKALF 349
            N E   QD    +S IK PTAPWM+GPLL++ NQ     +   K+D    + +    AL 
Sbjct: 59   NLEFENQDYGSSSSGIKGPTAPWMRGPLLLEPNQVLDLSKSRKKKDNNLAKTQNPNDALS 118

Query: 350  GKQGCGRGKKEMNKVYQGFEKLQRTHNSVHTQTPP-LEIKFKFSSQGL--FGDTQNKLDK 520
            GK   GRGKK M  +YQG +KLQ T     TQ    ++++F+F    L  +GD   ++++
Sbjct: 119  GKVSGGRGKKAMKMIYQGIDKLQETQIGECTQVETDVKVEFQFPPGSLSEWGDVSYEIEE 178

Query: 521  -----------------IGIDSK------------KMPWVKDDKLVIKRVKKERIMSSAE 613
                              G+ S+            +MPW  ++++V +R+KKE+++ +AE
Sbjct: 179  KNPYGEEDNVESLEGVEFGVLSREGEGRGSRKSGARMPWESEERIVYRRMKKEKVVMTAE 238

Query: 614  LNFDAFLLDRLXXXXXXXXXXXXXXXXXVNQSVIDQVRFIWRDNELAMLKFDLPLCRNME 793
             N DA LL+RL                 V ++V+DQ++FIW++NELAMLKFDLPLCRNM+
Sbjct: 239  SNLDAMLLERLKGEAARIQKWVKVKKAGVTRTVVDQIQFIWKNNELAMLKFDLPLCRNMD 298

Query: 794  RAREITEIKTGGFVVWVNKDALFVYKGCNY--------HSGLNSHS--SMISNIQDTESQ 943
            RAREI E+KTGGFVVW+ ++AL VY+GC+Y        H  L SH   S   NI++T   
Sbjct: 299  RAREIVEMKTGGFVVWMKQNALVVYRGCSYTIQQKELQHDFLCSHQNPSFTENIEETSIF 358

Query: 944  HEVNCHDQSQDEMLGKTENDGSNLLISGTLYDREADRLLDGLGPRFIDWWGRKPLPVDAD 1123
              +N    S+DEM+    ++  +L+++ +LY+REA+RLLD LGPR++DWW  KPLPVDAD
Sbjct: 359  SPLNLSGSSEDEMISVGNSEEDSLVMNESLYEREANRLLDDLGPRYVDWWWPKPLPVDAD 418

Query: 1124 LLQEVVPGFKPPWRICLPGVRLKLTDDELTHFRMLARPLPTHFVLGRNRNLQGMAVAILK 1303
            LL EVVPGFKPP+R+C P  R KLTDDELT  R LAR LPTHFVLGRNR LQG+A A++K
Sbjct: 419  LLPEVVPGFKPPFRLCPPRSRSKLTDDELTQLRKLARSLPTHFVLGRNRKLQGLAAALVK 478

Query: 1304 LWERCHIAKIALKVGVPNTDNEQMANEXXXXXXXXXXXRNKFLIIIYRGKDFLPPHVANI 1483
            LWE+CHIAKIALK G+PN  NE MANE           RNKF II+YRGKDFLP  VA +
Sbjct: 479  LWEKCHIAKIALKWGIPNASNELMANELKYLTGGVLLLRNKFFIILYRGKDFLPSQVAKL 538

Query: 1484 VMERESDLRRYQHQEEAARLVPNEQILVPHEL-QGNSISGTLTEFQSIHSECMTLNNGNE 1660
            V ERE +L R Q +EE AR    E + +  E    +SI GTL+EFQ+I         G E
Sbjct: 539  VAEREVELTRCQLEEEVARFKAIETLPITMEASMSSSIVGTLSEFQTI------AEPGKE 592

Query: 1661 K--VELELRTQKEMIEKELRFERQKLFILKKKIKDSEKYLNKLNLAWQSSEPAADHEVLT 1834
            K  V ++L ++KE +EKE+R ++  L+ILKKKI+ S   L KLN AW+ ++   D E+LT
Sbjct: 593  KSEVAVQLMSEKERLEKEVRNQQHSLYILKKKIEKSSIALGKLNAAWRPAKEDDDKEILT 652

Query: 1835 DEERECLRMIGLKMDSNLILGRRGVFDGVIEGLHQHWKNREVVKVITMQRRFPQITYAAK 2014
             EER  LR IGLKMD +L+LGRRGVFDGV+ GLHQHWK+REV+KVITMQ+ F Q+ + AK
Sbjct: 653  QEERRSLRQIGLKMDRSLVLGRRGVFDGVLAGLHQHWKHREVIKVITMQKIFSQVIHTAK 712

Query: 2015 LLTAESGGVLVSVDKLKEGHAIIIYRGKNYVRPALVQSKLPNKIDALRRSLLMQRIGSMK 2194
            LL  ESGG+L+SVDK+KEGHAIIIYRGKNY RP LV   L NK  AL RSL MQR+GS+K
Sbjct: 713  LLETESGGILISVDKIKEGHAIIIYRGKNYRRPELVPQNLLNKRQALCRSLEMQRLGSLK 772

Query: 2195 FFAKQKEQAISNLMDKM 2245
            F+A Q EQAIS+L  K+
Sbjct: 773  FYANQTEQAISDLKLKL 789


>XP_009787271.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Nicotiana sylvestris]
          Length = 796

 Score =  678 bits (1749), Expect = 0.0
 Identities = 376/731 (51%), Positives = 479/731 (65%), Gaps = 47/731 (6%)
 Frame = +2

Query: 215  QDASFIKAPTAPWMKGPLLVQENQ-----RPTTKRDPKFLQFERTGKALFGKQGCGRGKK 379
            + +S IK PTAPWM+GPLLV+ NQ     +   K+D  F + +    AL GK   GRGKK
Sbjct: 62   RSSSGIKGPTAPWMRGPLLVEPNQVLDLSKSRKKKDANFPKTQNPSDALSGKVSGGRGKK 121

Query: 380  EMNKVYQGFEKLQRTHNSVHT----------QTPPL------EIKFKFSSQGLFGDTQNK 511
             M K+YQ  +KLQ T N   T          Q PP       ++ F+F+ Q  +   ++K
Sbjct: 122  AMKKIYQSIDKLQETQNLEFTHVETDAKFEFQFPPASLSNWKDVNFQFNEQTPYVK-KDK 180

Query: 512  LDKIGID----------SKKMPWVKDDKLVIKRVKKERIMSSAELNFDAFLLDRLXXXXX 661
            ++++  D           +KMPW  ++++V +R+KKE+++++AEL  D+ LL+RL     
Sbjct: 181  VERVEFDILSGESEGRSGEKMPWESEERIVYRRMKKEKVLTAAELKLDSVLLERLRGEAG 240

Query: 662  XXXXXXXXXXXXVNQSVIDQVRFIWRDNELAMLKFDLPLCRNMERAREITEIKTGGFVVW 841
                        V Q V+ Q+  +W++NELAMLKFDLPLCRNM+RA+EI E+KTGGFVVW
Sbjct: 241  QIQKWVKVKKAGVTQVVVHQIHLLWKNNELAMLKFDLPLCRNMDRAQEIIEMKTGGFVVW 300

Query: 842  VNKDALFVYKGCNY-----------HSGLNS--HSSMISNIQDTESQHEVNCHDQSQDEM 982
              K+AL VY+GC+Y           H  L S  +SS     + T +    N    S D +
Sbjct: 301  RKKNALVVYRGCDYTLRQKDDPKRLHDFLRSQQNSSSTDTFKKTSAFLSSNSSRSSVDVI 360

Query: 983  LGKTENDGSNLLISGTLYDREADRLLDGLGPRFIDWWGRKPLPVDADLLQEVVPGFKPPW 1162
             G++  D S L I+ +L++REA+RLLD LGPR++DWW  KPLPVDADLL EVVPGFKPP+
Sbjct: 361  SGESSEDDS-LTINESLFEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVVPGFKPPF 419

Query: 1163 RICLPGVRLKLTDDELTHFRMLARPLPTHFVLGRNRNLQGMAVAILKLWERCHIAKIALK 1342
            R+C P  R KLTDDELTH R LAR LPTHFVLGRNR LQG+A A++KLWE+CHIAKIALK
Sbjct: 420  RLCPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLAAAVIKLWEKCHIAKIALK 479

Query: 1343 VGVPNTDNEQMANEXXXXXXXXXXXRNKFLIIIYRGKDFLPPHVANIVMERESDLRRYQH 1522
             G+PNT+NE MANE           RNKF II+YRGKDFLP  VA++V ERE +LR  Q 
Sbjct: 480  WGIPNTNNELMANELKYLTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREVELRICQL 539

Query: 1523 QEEAARLVPNEQI-LVPHELQGNSISGTLTEFQSIHSECMTLNNGNEK--VELELRTQKE 1693
            +EEAAR    E + +   E   +S  GTL+EFQ+I         G EK   E++L  +KE
Sbjct: 540  EEEAARFKAIETLPITTGESMSSSNVGTLSEFQTI------AEPGREKSETEVQLVAEKE 593

Query: 1694 MIEKELRFERQKLFILKKKIKDSEKYLNKLNLAWQSSEPAADHEVLTDEERECLRMIGLK 1873
             +EKELR E+  L+ILKKKI+ S   L KL+ AW+ ++P  D E+LT EER  LR IGLK
Sbjct: 594  RLEKELRDEQHSLYILKKKIEKSSIALGKLDAAWRPAKPDVDKEILTQEERRSLRQIGLK 653

Query: 1874 MDSNLILGRRGVFDGVIEGLHQHWKNREVVKVITMQRRFPQITYAAKLLTAESGGVLVSV 2053
            MD +L+LGRRGVFDGV+ GLHQHWK+REVVKVITMQ+ F  + + A LL AESGG+LVSV
Sbjct: 654  MDRSLVLGRRGVFDGVLAGLHQHWKHREVVKVITMQKIFSHVIHTANLLEAESGGILVSV 713

Query: 2054 DKLKEGHAIIIYRGKNYVRPALVQSKLPNKIDALRRSLLMQRIGSMKFFAKQKEQAISNL 2233
            DKLKEGHAI+IYRGKNY RP LV   L NK  AL RSL MQR+GS+KF+A Q EQAIS+L
Sbjct: 714  DKLKEGHAIVIYRGKNYRRPELVPQNLLNKRQALSRSLEMQRLGSLKFYANQTEQAISDL 773

Query: 2234 MDKMSALDEKI 2266
              K+     KI
Sbjct: 774  KCKLVEYTVKI 784


>XP_019080763.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Vitis vinifera] XP_019080764.1
            PREDICTED: chloroplastic group IIA intron splicing
            facilitator CRS1, chloroplastic isoform X1 [Vitis
            vinifera] XP_019080765.1 PREDICTED: chloroplastic group
            IIA intron splicing facilitator CRS1, chloroplastic
            isoform X1 [Vitis vinifera]
          Length = 840

 Score =  679 bits (1753), Expect = 0.0
 Identities = 375/725 (51%), Positives = 479/725 (66%), Gaps = 48/725 (6%)
 Frame = +2

Query: 230  IKAPTAPWMKGPLLVQENQ-RPTTKRDPKFLQ----FERTGKALFGKQGCGRGKKEMNKV 394
            IK PTAPWMKGPLL+Q N+    +K  PK +      E+  ++L  K   GRG K M K+
Sbjct: 73   IKMPTAPWMKGPLLLQPNEVLDLSKARPKKVAGSAGAEKPDRSLTEKVSGGRGAKAMKKI 132

Query: 395  YQGFEKLQRTHNSVHTQTPPLEIKFKFSSQGLFGDTQNKLDKIGIDSKKMPWVKDDKLVI 574
             Q   KLQ TH S  TQ    E +F  S +G+ GD  +++        KMPW+K +K+V 
Sbjct: 133  MQSIVKLQETHTSDETQENTEEFEFGVSLEGIGGDENSRI------GGKMPWLKTEKVVF 186

Query: 575  KRVKKERIMSSAELNFDAFLLDRLXXXXXXXXXXXXXXXXXVNQSVIDQVRFIWRDNELA 754
            +R KKE+++++AEL  D  LL+RL                 V +SV+DQ+  +W+ +ELA
Sbjct: 187  RRTKKEKVVTAAELTLDPMLLERLRGEAVKMRKWVKVKKAGVTESVVDQIHMVWKSDELA 246

Query: 755  MLKFDLPLCRNMERAREITEIKTGGFVVWVNKDALFVYKGCNYHS--------------G 892
            M+KFD+PLCRNM+RAREI EIKT G V+W  KD L VY+G NY S              G
Sbjct: 247  MVKFDMPLCRNMDRAREILEIKTRGLVIWSKKDTLVVYRGSNYQSTSKHFQKMRPGLVAG 306

Query: 893  LNSHSSMI--SNIQDTESQHEVNCHDQSQDEMLGKT--ENDGS-----------NLLISG 1027
             ++ +S +  SN +D  +  E+  H+ +  E +G+   E D S           +  ++G
Sbjct: 307  ADASNSKLNQSNFEDDLTISEIKFHESTTGEKMGRKDGEEDSSPTGIFMEEMVDSQPVNG 366

Query: 1028 TLYDREADRLLDGLGPRFIDWWGRKPLPVDADLLQEVVPGFKPPWRICLPGVRLKLTDDE 1207
            +LY+READRLLDGLGPRFIDWW  KPLPVDADLL EV+PGF+PP+R+  P  R KLTDDE
Sbjct: 367  SLYEREADRLLDGLGPRFIDWWRPKPLPVDADLLPEVLPGFRPPFRLSPPQTRSKLTDDE 426

Query: 1208 LTHFRMLARPLPTHFVLGRNRNLQGMAVAILKLWERCHIAKIALKVGVPNTDNEQMANEX 1387
            LT+ R LA  LPTHFVLGRNR LQG+A AILKLWE+  I KIA+K G+PNT NEQMANE 
Sbjct: 427  LTYLRKLAYALPTHFVLGRNRKLQGLAAAILKLWEKSLIVKIAIKWGIPNTKNEQMANEL 486

Query: 1388 XXXXXXXXXX------------RNKFLIIIYRGKDFLPPHVANIVMERESDLRRYQHQEE 1531
                                  RNKF II+YRGKDFLP  VAN+++ERE + +  Q +EE
Sbjct: 487  KASLVTRRFHAVNCLTGGVLLLRNKFFIILYRGKDFLPCRVANLIVEREMEFKGCQIREE 546

Query: 1532 AARLVPNEQILVPHE-LQGNSISGTLTEFQSIHSECMTLNNGNEKVELELRTQKEMIEKE 1708
             ARL   E   V  + L   S +GTL+EFQ+I +E   L +GN ++E+EL  +KE +EKE
Sbjct: 547  DARLKAIETSFVTDKPLANTSTTGTLSEFQNIETEFRGLKDGNTEIEVELEAEKERLEKE 606

Query: 1709 LRFERQKLFILKKKIKDSEKYLNKLNLAWQSSEPAADHEVLTDEERECLRMIGLKMDSNL 1888
            L+ + + LFILK+KI+ S K L KLN AW+ ++  AD E++T+EEREC R IG KMDS+L
Sbjct: 607  LKKQERNLFILKRKIERSAKVLAKLNSAWRPADHDADKEMITEEERECFRKIGQKMDSSL 666

Query: 1889 ILGRRGVFDGVIEGLHQHWKNREVVKVITMQRRFPQITYAAKLLTAESGGVLVSVDKLKE 2068
            +LGRRGVFDGVIEGLHQHWK+RE+VKVITMQR F Q+ Y AKLL +ESGGVLVS+DKLKE
Sbjct: 667  LLGRRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQVLYTAKLLESESGGVLVSIDKLKE 726

Query: 2069 GHAIIIYRGKNYVRP-ALVQSKLPNKIDALRRSLLMQRIGSMKFFAKQKEQAISNLMDKM 2245
            GHAIIIYRGKNY RP  LV   L  K +AL RSL MQRIGS+KFFA Q++QAIS+L  K+
Sbjct: 727  GHAIIIYRGKNYRRPIKLVPKNLLTKREALNRSLEMQRIGSLKFFAYQRQQAISDLKLKL 786

Query: 2246 SALDE 2260
            + L +
Sbjct: 787  ADLQK 791


>XP_019080766.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X3 [Vitis vinifera]
          Length = 801

 Score =  678 bits (1749), Expect = 0.0
 Identities = 374/720 (51%), Positives = 476/720 (66%), Gaps = 48/720 (6%)
 Frame = +2

Query: 230  IKAPTAPWMKGPLLVQENQ-RPTTKRDPKFLQ----FERTGKALFGKQGCGRGKKEMNKV 394
            IK PTAPWMKGPLL+Q N+    +K  PK +      E+  ++L  K   GRG K M K+
Sbjct: 73   IKMPTAPWMKGPLLLQPNEVLDLSKARPKKVAGSAGAEKPDRSLTEKVSGGRGAKAMKKI 132

Query: 395  YQGFEKLQRTHNSVHTQTPPLEIKFKFSSQGLFGDTQNKLDKIGIDSKKMPWVKDDKLVI 574
             Q   KLQ TH S  TQ    E +F  S +G+ GD  +++        KMPW+K +K+V 
Sbjct: 133  MQSIVKLQETHTSDETQENTEEFEFGVSLEGIGGDENSRI------GGKMPWLKTEKVVF 186

Query: 575  KRVKKERIMSSAELNFDAFLLDRLXXXXXXXXXXXXXXXXXVNQSVIDQVRFIWRDNELA 754
            +R KKE+++++AEL  D  LL+RL                 V +SV+DQ+  +W+ +ELA
Sbjct: 187  RRTKKEKVVTAAELTLDPMLLERLRGEAVKMRKWVKVKKAGVTESVVDQIHMVWKSDELA 246

Query: 755  MLKFDLPLCRNMERAREITEIKTGGFVVWVNKDALFVYKGCNYHS--------------G 892
            M+KFD+PLCRNM+RAREI EIKT G V+W  KD L VY+G NY S              G
Sbjct: 247  MVKFDMPLCRNMDRAREILEIKTRGLVIWSKKDTLVVYRGSNYQSTSKHFQKMRPGLVAG 306

Query: 893  LNSHSSMI--SNIQDTESQHEVNCHDQSQDEMLGKT--ENDGS-----------NLLISG 1027
             ++ +S +  SN +D  +  E+  H+ +  E +G+   E D S           +  ++G
Sbjct: 307  ADASNSKLNQSNFEDDLTISEIKFHESTTGEKMGRKDGEEDSSPTGIFMEEMVDSQPVNG 366

Query: 1028 TLYDREADRLLDGLGPRFIDWWGRKPLPVDADLLQEVVPGFKPPWRICLPGVRLKLTDDE 1207
            +LY+READRLLDGLGPRFIDWW  KPLPVDADLL EV+PGF+PP+R+  P  R KLTDDE
Sbjct: 367  SLYEREADRLLDGLGPRFIDWWRPKPLPVDADLLPEVLPGFRPPFRLSPPQTRSKLTDDE 426

Query: 1208 LTHFRMLARPLPTHFVLGRNRNLQGMAVAILKLWERCHIAKIALKVGVPNTDNEQMANEX 1387
            LT+ R LA  LPTHFVLGRNR LQG+A AILKLWE+  I KIA+K G+PNT NEQMANE 
Sbjct: 427  LTYLRKLAYALPTHFVLGRNRKLQGLAAAILKLWEKSLIVKIAIKWGIPNTKNEQMANEL 486

Query: 1388 XXXXXXXXXX------------RNKFLIIIYRGKDFLPPHVANIVMERESDLRRYQHQEE 1531
                                  RNKF II+YRGKDFLP  VAN+++ERE + +  Q +EE
Sbjct: 487  KASLVTRRFHAVNCLTGGVLLLRNKFFIILYRGKDFLPCRVANLIVEREMEFKGCQIREE 546

Query: 1532 AARLVPNEQILVPHE-LQGNSISGTLTEFQSIHSECMTLNNGNEKVELELRTQKEMIEKE 1708
             ARL   E   V  + L   S +GTL+EFQ+I +E   L +GN ++E+EL  +KE +EKE
Sbjct: 547  DARLKAIETSFVTDKPLANTSTTGTLSEFQNIETEFRGLKDGNTEIEVELEAEKERLEKE 606

Query: 1709 LRFERQKLFILKKKIKDSEKYLNKLNLAWQSSEPAADHEVLTDEERECLRMIGLKMDSNL 1888
            L+ + + LFILK+KI+ S K L KLN AW+ ++  AD E++T+EEREC R IG KMDS+L
Sbjct: 607  LKKQERNLFILKRKIERSAKVLAKLNSAWRPADHDADKEMITEEERECFRKIGQKMDSSL 666

Query: 1889 ILGRRGVFDGVIEGLHQHWKNREVVKVITMQRRFPQITYAAKLLTAESGGVLVSVDKLKE 2068
            +LGRRGVFDGVIEGLHQHWK+RE+VKVITMQR F Q+ Y AKLL +ESGGVLVS+DKLKE
Sbjct: 667  LLGRRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQVLYTAKLLESESGGVLVSIDKLKE 726

Query: 2069 GHAIIIYRGKNYVRP-ALVQSKLPNKIDALRRSLLMQRIGSMKFFAKQKEQAISNLMDKM 2245
            GHAIIIYRGKNY RP  LV   L  K +AL RSL MQRIGS+KFFA Q++QAIS+L  K+
Sbjct: 727  GHAIIIYRGKNYRRPIKLVPKNLLTKREALNRSLEMQRIGSLKFFAYQRQQAISDLKLKL 786


>XP_009787273.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X3 [Nicotiana sylvestris]
          Length = 776

 Score =  676 bits (1745), Expect = 0.0
 Identities = 374/723 (51%), Positives = 476/723 (65%), Gaps = 47/723 (6%)
 Frame = +2

Query: 215  QDASFIKAPTAPWMKGPLLVQENQ-----RPTTKRDPKFLQFERTGKALFGKQGCGRGKK 379
            + +S IK PTAPWM+GPLLV+ NQ     +   K+D  F + +    AL GK   GRGKK
Sbjct: 62   RSSSGIKGPTAPWMRGPLLVEPNQVLDLSKSRKKKDANFPKTQNPSDALSGKVSGGRGKK 121

Query: 380  EMNKVYQGFEKLQRTHNSVHT----------QTPPL------EIKFKFSSQGLFGDTQNK 511
             M K+YQ  +KLQ T N   T          Q PP       ++ F+F+ Q  +   ++K
Sbjct: 122  AMKKIYQSIDKLQETQNLEFTHVETDAKFEFQFPPASLSNWKDVNFQFNEQTPYVK-KDK 180

Query: 512  LDKIGID----------SKKMPWVKDDKLVIKRVKKERIMSSAELNFDAFLLDRLXXXXX 661
            ++++  D           +KMPW  ++++V +R+KKE+++++AEL  D+ LL+RL     
Sbjct: 181  VERVEFDILSGESEGRSGEKMPWESEERIVYRRMKKEKVLTAAELKLDSVLLERLRGEAG 240

Query: 662  XXXXXXXXXXXXVNQSVIDQVRFIWRDNELAMLKFDLPLCRNMERAREITEIKTGGFVVW 841
                        V Q V+ Q+  +W++NELAMLKFDLPLCRNM+RA+EI E+KTGGFVVW
Sbjct: 241  QIQKWVKVKKAGVTQVVVHQIHLLWKNNELAMLKFDLPLCRNMDRAQEIIEMKTGGFVVW 300

Query: 842  VNKDALFVYKGCNY-----------HSGLNS--HSSMISNIQDTESQHEVNCHDQSQDEM 982
              K+AL VY+GC+Y           H  L S  +SS     + T +    N    S D +
Sbjct: 301  RKKNALVVYRGCDYTLRQKDDPKRLHDFLRSQQNSSSTDTFKKTSAFLSSNSSRSSVDVI 360

Query: 983  LGKTENDGSNLLISGTLYDREADRLLDGLGPRFIDWWGRKPLPVDADLLQEVVPGFKPPW 1162
             G++  D S L I+ +L++REA+RLLD LGPR++DWW  KPLPVDADLL EVVPGFKPP+
Sbjct: 361  SGESSEDDS-LTINESLFEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVVPGFKPPF 419

Query: 1163 RICLPGVRLKLTDDELTHFRMLARPLPTHFVLGRNRNLQGMAVAILKLWERCHIAKIALK 1342
            R+C P  R KLTDDELTH R LAR LPTHFVLGRNR LQG+A A++KLWE+CHIAKIALK
Sbjct: 420  RLCPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLAAAVIKLWEKCHIAKIALK 479

Query: 1343 VGVPNTDNEQMANEXXXXXXXXXXXRNKFLIIIYRGKDFLPPHVANIVMERESDLRRYQH 1522
             G+PNT+NE MANE           RNKF II+YRGKDFLP  VA++V ERE +LR  Q 
Sbjct: 480  WGIPNTNNELMANELKYLTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREVELRICQL 539

Query: 1523 QEEAARLVPNEQI-LVPHELQGNSISGTLTEFQSIHSECMTLNNGNEK--VELELRTQKE 1693
            +EEAAR    E + +   E   +S  GTL+EFQ+I         G EK   E++L  +KE
Sbjct: 540  EEEAARFKAIETLPITTGESMSSSNVGTLSEFQTI------AEPGREKSETEVQLVAEKE 593

Query: 1694 MIEKELRFERQKLFILKKKIKDSEKYLNKLNLAWQSSEPAADHEVLTDEERECLRMIGLK 1873
             +EKELR E+  L+ILKKKI+ S   L KL+ AW+ ++P  D E+LT EER  LR IGLK
Sbjct: 594  RLEKELRDEQHSLYILKKKIEKSSIALGKLDAAWRPAKPDVDKEILTQEERRSLRQIGLK 653

Query: 1874 MDSNLILGRRGVFDGVIEGLHQHWKNREVVKVITMQRRFPQITYAAKLLTAESGGVLVSV 2053
            MD +L+LGRRGVFDGV+ GLHQHWK+REVVKVITMQ+ F  + + A LL AESGG+LVSV
Sbjct: 654  MDRSLVLGRRGVFDGVLAGLHQHWKHREVVKVITMQKIFSHVIHTANLLEAESGGILVSV 713

Query: 2054 DKLKEGHAIIIYRGKNYVRPALVQSKLPNKIDALRRSLLMQRIGSMKFFAKQKEQAISNL 2233
            DKLKEGHAI+IYRGKNY RP LV   L NK  AL RSL MQR+GS+KF+A Q EQAIS+L
Sbjct: 714  DKLKEGHAIVIYRGKNYRRPELVPQNLLNKRQALSRSLEMQRLGSLKFYANQTEQAISDL 773

Query: 2234 MDK 2242
              K
Sbjct: 774  KCK 776