BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00009282
         (3411 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_011088993.1 PREDICTED: replication factor C subunit 1 [Sesamu...  1058   0.0  
XP_008375618.1 PREDICTED: replication factor C subunit 1 [Malus ...  1056   0.0  
XP_009361449.1 PREDICTED: replication factor C subunit 1 isoform...  1055   0.0  
XP_009361447.1 PREDICTED: replication factor C subunit 1 isoform...  1054   0.0  
XP_008237209.1 PREDICTED: replication factor C subunit 1 isoform...  1052   0.0  
XP_008237211.1 PREDICTED: replication factor C subunit 1 isoform...  1051   0.0  
CDP15576.1 unnamed protein product [Coffea canephora]                1034   0.0  
XP_010651545.1 PREDICTED: replication factor C subunit 1 [Vitis ...  1033   0.0  
XP_018851841.1 PREDICTED: replication factor C subunit 1 [Juglan...  1032   0.0  
XP_012459306.1 PREDICTED: replication factor C subunit 1 [Gossyp...  1023   0.0  
XP_016714165.1 PREDICTED: replication factor C subunit 1 [Gossyp...  1022   0.0  
XP_011037296.1 PREDICTED: replication factor C subunit 1 [Populu...  1019   0.0  
XP_012066371.1 PREDICTED: replication factor C subunit 1 [Jatrop...  1019   0.0  
KDP42975.1 hypothetical protein JCGZ_23917 [Jatropha curcas]         1019   0.0  
XP_017615387.1 PREDICTED: replication factor C subunit 1 [Gossyp...  1018   0.0  
XP_015873623.1 PREDICTED: replication factor C subunit 1 isoform...  1017   0.0  
XP_015873622.1 PREDICTED: replication factor C subunit 1 isoform...  1017   0.0  
XP_017252680.1 PREDICTED: replication factor C subunit 1 [Daucus...  1017   0.0  
XP_012855762.1 PREDICTED: replication factor C subunit 1 [Erythr...  1015   0.0  
XP_018826530.1 PREDICTED: replication factor C subunit 1-like [J...  1014   0.0  

>XP_011088993.1 PREDICTED: replication factor C subunit 1 [Sesamum indicum]
            XP_011088994.1 PREDICTED: replication factor C subunit 1
            [Sesamum indicum] XP_011088995.1 PREDICTED: replication
            factor C subunit 1 [Sesamum indicum]
          Length = 1011

 Score = 1058 bits (2735), Expect = 0.0
 Identities = 563/787 (71%), Positives = 632/787 (80%), Gaps = 10/787 (1%)
 Frame = +3

Query: 738  FMNFGERKDPPHKGEKEIPEGKRDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 917
            FMNFGERKDPPHKGEKE+PEG  DCL GLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV
Sbjct: 229  FMNFGERKDPPHKGEKEVPEGAPDCLDGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 288

Query: 918  SKKTSYLLCDEDIEGKKSEKAKELGTTFLTEDALFDMIRKSNKSLTSPKEEKKALNKVAP 1097
            SKKT+YLLCDEDI G+KS KAKELGT FLTED LFDMIR SNKS TS +  K  ++KVAP
Sbjct: 289  SKKTNYLLCDEDIGGRKSAKAKELGTAFLTEDGLFDMIRTSNKSKTSAQISKMPVDKVAP 348

Query: 1098 SPAKGSPIKSETTSTEKVQAGNSAAKV-----TSGTPFCKKSKQPADKSWLQWTEKYRPK 1262
            SP K SP KS  T      A N  A++     TS     K+  Q   ++WL WTEKYRPK
Sbjct: 349  SPPKKSPQKSGKTE----HAANLVARIDVKGLTSRASSSKRKDQSTAQTWLPWTEKYRPK 404

Query: 1263 VPTDLVGNQSLVKQLHDWLKQWDDQFLNTTSKGKGKKQNDSGAKKAVLLSGTPGIGKTTS 1442
            VP D+VGNQSLVKQLHDWL  W++QFLNT  KGKGKKQNDSGAKKAVLLSGTPGIGKTTS
Sbjct: 405  VPNDIVGNQSLVKQLHDWLVNWNEQFLNTGKKGKGKKQNDSGAKKAVLLSGTPGIGKTTS 464

Query: 1443 AKIVSQMLGFQAVEVNASDSRGKADAKIQKGIGGSTANSIKELVSNNSLGLTLDRPHQTK 1622
            AK+VSQMLGFQ +EVNASDSRGKADAKI+KGIGGST+NSIKELVSN +L L +D     K
Sbjct: 465  AKLVSQMLGFQTIEVNASDSRGKADAKIEKGIGGSTSNSIKELVSNEALNLKMDCSQPPK 524

Query: 1623 TVLIMDEVDGMSGGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCLLLSFRKP 1802
            TVLIMDEVDGMS GDRGGVADL               NDRYSQKLKSLVNYCLLLSFRKP
Sbjct: 525  TVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKP 584

Query: 1803 TKQQMAKRLMHVAKAEGVKVNEIALEELASRVNGDMRMALNQLQYMSLSNSEIGYDNIRQ 1982
            TKQQMAKRL  +AKAEG++VNEIALEELA RVNGD+RMALNQLQYMSLS S I +D+I+Q
Sbjct: 585  TKQQMAKRLSQIAKAEGLQVNEIALEELAERVNGDIRMALNQLQYMSLSMSVIKFDDIKQ 644

Query: 1983 RLQNSSKDEDISPFTAVDKL--FTADKLRMDERIDLSMSDPDLVPLLIQENYINFRPRSL 2156
            RLQ++SKDEDISPFTAVDKL  F   KLRMDERIDLSMSDPDLVPLLIQENYIN+RP S 
Sbjct: 645  RLQSNSKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPSSA 704

Query: 2157 GGYNRSKMDNAKQSEEEIRHLNLLSRAADSIADGDIVNVQIRRYQRWQLSQTSVLASCII 2336
            G     K DN       ++ +NLL+RAA+SI DGDI+NVQIRRY++WQLSQ   LAS II
Sbjct: 705  G-----KDDNG------MKRMNLLARAAESIGDGDIINVQIRRYRQWQLSQIGCLASSII 753

Query: 2337 PSMLLHGQRQTLEQGERNFNRFGGWLGKNSTLGKNYRLLEDLHVHLLASCESYMGRMALR 2516
            P+ +LHGQR+TLEQGERNFNRFGGWLGKNST+GKNYRLLEDLHVHLLAS ES +GR  LR
Sbjct: 754  PAAILHGQRETLEQGERNFNRFGGWLGKNSTMGKNYRLLEDLHVHLLASRESNLGRAPLR 813

Query: 2517 LDHLTLLKKQLTDPLRQLAKDEAVEKVVEFMXXXXXXXXXXXXXMEISKFQGHPNPLEGV 2696
            LD+LTLL K+LTDPLR L KDEAVE+VVEFM             +E+SKF+GHPN L+G+
Sbjct: 814  LDYLTLLLKRLTDPLRVLPKDEAVERVVEFMDLYSISMEDFDTMVEMSKFKGHPNALDGI 873

Query: 2697 QPTVKTALTKAYNKGSKSRVIRTADLITLPGIKKAPKKRIAAMLEPVDEGIAEETDGTLL 2876
            QP VK+ALT+AYNKGS SRVIR+ADLITLPGIKKAPKKR+AAMLEPV+E +AEE      
Sbjct: 874  QPVVKSALTRAYNKGSSSRVIRSADLITLPGIKKAPKKRVAAMLEPVEETLAEEN----A 929

Query: 2877 GNEDENSSETEDLEDS--NDAEKLQSDLQSLNRKGIQVDMDLKVSG-KASAKKTPASRGK 3047
             NE+E SS+TED E+   +  +KLQ+DL+SLN KGIQV M+LK SG  +SAKK P+ RGK
Sbjct: 930  ENEEEISSDTEDQEEELIDSDKKLQADLESLNSKGIQVQMELKGSGSSSSAKKPPSGRGK 989

Query: 3048 KNAEAAD 3068
             +A  +D
Sbjct: 990  GSAATSD 996



 Score = 80.9 bits (198), Expect = 1e-11
 Identities = 52/143 (36%), Positives = 69/143 (48%), Gaps = 17/143 (11%)
 Frame = +3

Query: 123 LEMSDIRKWFMKQHDKSPGDGKAPK------PVVPASQPNKSG---SAGQEASGRRKTSK 275
           ++  DIRKWFMKQ DK  G+G + K      P  P++   +SG      QE SGRRKTSK
Sbjct: 1   MQSQDIRKWFMKQQDKGTGNGNSSKQTKSSTPEKPSALTPQSGKLVQGMQECSGRRKTSK 60

Query: 276 YFASDXXXXXXXXXXXXXXXRKASNVGNEQSV-------KKVHKIE-XXXXXXLVLAAPT 431
           YFA D                K    G+ +         KK+HK+E        V+    
Sbjct: 61  YFAKDGKNAKDEMEVEESSTEKKGQRGSMELTKVKSPPGKKIHKLENDDEDEDFVIPTSG 120

Query: 432 KTSIGASPNKKLKGASGRGITRK 500
           K S+  +PNKKLK  SG+G+ +K
Sbjct: 121 KGSVDTTPNKKLKSGSGKGVAQK 143


>XP_008375618.1 PREDICTED: replication factor C subunit 1 [Malus domestica]
          Length = 959

 Score = 1056 bits (2731), Expect = 0.0
 Identities = 580/990 (58%), Positives = 686/990 (69%), Gaps = 11/990 (1%)
 Frame = +3

Query: 129  MSDIRKWFMKQHDKSPGDGKAPKPVVPA-SQPNKSGSAGQEASGRRKTSKYFASDXXXXX 305
            M+DIRKWFMK HDK  G+ K P+  V   ++P +    GQE SGRRKTSKYF +D     
Sbjct: 1    MADIRKWFMKSHDK--GNTKKPEATVSQKTEPKEPVQGGQENSGRRKTSKYFPTDKPKDE 58

Query: 306  XXXXXXXXXXRKASNVGNE---QSVKKVHKIEXXXXXXLVLAAPTKTSIGASPNKKLKGA 476
                      +   +          KK HK++       V +   K S+ A+P+KKLK  
Sbjct: 59   KGTTEVPAKRKPHKDPDESIKPSPAKKAHKVDVDDDDDFVSSNSKKKSVYATPSKKLKST 118

Query: 477  SGRGITRKXXXXXXXXXXXXKTRKS-LKPVXXXXXXXXXPKTPVHXXXXXXXXXXXXXXX 653
            SG GI +K            K  +S LKP             P                 
Sbjct: 119  SGTGIPQKVMANDEAGDEDEKVAESSLKPAGRGRGGRGASAVPA---------------- 162

Query: 654  XXXXXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERKDPPHKGEKEIPEGKRDCLAGLTFV 833
                                        FMN+GERKDPPHKGEKE+PEG  +CLAGLTFV
Sbjct: 163  -----------------GGRGRGAGRGGFMNYGERKDPPHKGEKEVPEGAPNCLAGLTFV 205

Query: 834  ISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTSYLLCDEDIEGKKSEKAKELGTTFLTED 1013
            ISGTLDSLEREEAEDLIKRHGGR+TGSVSKKT+YLLCDEDIEG+KS KAKELGT FLTED
Sbjct: 206  ISGTLDSLEREEAEDLIKRHGGRITGSVSKKTNYLLCDEDIEGRKSSKAKELGTAFLTED 265

Query: 1014 ALFDMIRKSNKSLTSPKEEKKALNKVAPSPAKGSPIKSETTS---TEKVQAGNSAAK-VT 1181
             LF  IR S  +    +E KK+++  A +       K  T     T  + A ++++K + 
Sbjct: 266  GLFGKIRASIGAKVPVQEAKKSVDDAAAASLPSKSPKKVTLKKDCTGSLLASSASSKQLQ 325

Query: 1182 SGTPFCKKSKQPADKSWLQWTEKYRPKVPTDLVGNQSLVKQLHDWLKQWDDQFLNTTSKG 1361
            S     ++ KQ  + S   WTEKYRPKVP D+VGNQSLVKQLHDWL  W++QFL+T  K 
Sbjct: 326  SDASLARRKKQTTEHSTFTWTEKYRPKVPNDIVGNQSLVKQLHDWLSHWNEQFLDTGDKK 385

Query: 1362 KGKKQNDSGAKKAVLLSGTPGIGKTTSAKIVSQMLGFQAVEVNASDSRGKADAKIQKGIG 1541
            KGK   +SGAKKAVLLSGTPGIGKTTSAK+VSQMLGFQA+EVNASDSRGKAD+KI+KGIG
Sbjct: 386  KGKNPINSGAKKAVLLSGTPGIGKTTSAKLVSQMLGFQAIEVNASDSRGKADSKIEKGIG 445

Query: 1542 GSTANSIKELVSNNSLGLTLDRPHQTKTVLIMDEVDGMSGGDRGGVADLXXXXXXXXXXX 1721
            GS ANSIKELVSN   GL++D     KTVLIMDEVDGMS GDRGGVADL           
Sbjct: 446  GSNANSIKELVSNK--GLSMDGSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPI 503

Query: 1722 XXXXNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLMHVAKAEGVKVNEIALEELASRVN 1901
                NDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLM VA AEG++VNEIALEELA +VN
Sbjct: 504  ICICNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLMQVANAEGLQVNEIALEELAEKVN 563

Query: 1902 GDMRMALNQLQYMSLSNSEIGYDNIRQRLQNSSKDEDISPFTAVDKLF--TADKLRMDER 2075
            GDMRMA+NQLQYMSLS S I YD++RQRL +SSKDEDISPFTAVDKLF   A KLRMDER
Sbjct: 564  GDMRMAVNQLQYMSLSMSVIKYDDVRQRLLSSSKDEDISPFTAVDKLFGFNAGKLRMDER 623

Query: 2076 IDLSMSDPDLVPLLIQENYINFRPRSLGGYNRSKMDNAKQSEEEIRHLNLLSRAADSIAD 2255
            +DLSMSDPDLVPLLIQENY+N+RP +           A + +  I+ LNL++RAA+SI +
Sbjct: 624  VDLSMSDPDLVPLLIQENYVNYRPSA-----------AVKDDSGIKRLNLIARAAESIGN 672

Query: 2256 GDIVNVQIRRYQRWQLSQTSVLASCIIPSMLLHGQRQTLEQGERNFNRFGGWLGKNSTLG 2435
            GDI NVQIR+Y++WQLSQ++ L+S IIP+ LL GQR+TLEQGERNFNRFGGWLGKNSTLG
Sbjct: 673  GDIFNVQIRKYRQWQLSQSACLSSSIIPAALLRGQRETLEQGERNFNRFGGWLGKNSTLG 732

Query: 2436 KNYRLLEDLHVHLLASCESYMGRMALRLDHLTLLKKQLTDPLRQLAKDEAVEKVVEFMXX 2615
            KN RLLEDLHVHLLAS ES  GR  +R+++L+LL K+LT PLR+L KDEAV++VVEFM  
Sbjct: 733  KNRRLLEDLHVHLLASRESSSGRETVRVEYLSLLLKRLTVPLRELPKDEAVQEVVEFMNT 792

Query: 2616 XXXXXXXXXXXMEISKFQGHPNPLEGVQPTVKTALTKAYNKGSKSRVIRTADLITLPGIK 2795
                       +E+SK+QGHPNPL+G+ P VK ALTKAY +GSK+R++R AD +T+PG+K
Sbjct: 793  YSISQDDFDTIVELSKYQGHPNPLDGIVPAVKAALTKAYKEGSKTRMVRAADFVTIPGMK 852

Query: 2796 KAPKKRIAAMLEPVDEGIAEETDGTLLGNEDENSSETEDLEDSNDAEKLQSDLQSLNRKG 2975
            KAPKKRIAA+LEP D+ I E  D TL+ +EDENSS+TEDLEDS   EKLQ +LQSLN KG
Sbjct: 853  KAPKKRIAALLEPSDDAIGENNDDTLVQSEDENSSDTEDLEDSAVGEKLQKELQSLNTKG 912

Query: 2976 IQVDMDLKVSGKASAKKTPASRGKKNAEAA 3065
            +QV  DLK +   SAKKTPA RG+  + AA
Sbjct: 913  VQVQFDLKGAPNTSAKKTPAGRGRGGSAAA 942


>XP_009361449.1 PREDICTED: replication factor C subunit 1 isoform X3 [Pyrus x
            bretschneideri]
          Length = 960

 Score = 1055 bits (2728), Expect = 0.0
 Identities = 578/992 (58%), Positives = 688/992 (69%), Gaps = 13/992 (1%)
 Frame = +3

Query: 129  MSDIRKWFMKQHDKSPGDGKAPKPVVPA-SQPNKSGSAGQEASGRRKTSKYFASDXXXXX 305
            M+DIRKWFMK HDK  G+ K P+  V   ++P +    GQE SGRRKTSKYF +D     
Sbjct: 1    MADIRKWFMKSHDK--GNTKKPEATVSQKTEPKEPVQGGQENSGRRKTSKYFPTDKPKDE 58

Query: 306  XXXXXXXXXXRKASNVGNEQSVK-----KVHKIEXXXXXXLVLAAPTKTSIGASPNKKLK 470
                      ++  +   ++SVK     K HK++       V     K S+ A+P+KKLK
Sbjct: 59   KGTTEVPA--KRKPHKDPDESVKPSPAKKAHKVDDDDDDDFVSPNSKKKSVDATPSKKLK 116

Query: 471  GASGRGITRKXXXXXXXXXXXXKTRKS-LKPVXXXXXXXXXPKTPVHXXXXXXXXXXXXX 647
              SG GI +K            K  +S LKP             P               
Sbjct: 117  STSGTGIPQKVRAIDDGGDEDEKVAESSLKPAGRGRGGRGASAAPA-------------- 162

Query: 648  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERKDPPHKGEKEIPEGKRDCLAGLT 827
                                          FMNFGERKDPPHKGEKE+PEG  +CLAGLT
Sbjct: 163  -------------------GGRGRGAGRGGFMNFGERKDPPHKGEKEVPEGAPNCLAGLT 203

Query: 828  FVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTSYLLCDEDIEGKKSEKAKELGTTFLT 1007
            FVISGTLDSLEREEAEDLIKRHGGR+TGSVSKKT+YLLCDEDIEG+KS KAKELGT FLT
Sbjct: 204  FVISGTLDSLEREEAEDLIKRHGGRITGSVSKKTNYLLCDEDIEGRKSSKAKELGTAFLT 263

Query: 1008 EDALFDMIRKSNKSLTSPKEEKKALNKVAPSPAKGSPIKSETTSTE----KVQAGNSAAK 1175
            ED LF MIR S  +    +E KK+++  A +       K  T   +     + +  S+ +
Sbjct: 264  EDGLFGMIRASIGAKVPVQEAKKSVDDAAAASLHSKSPKKVTLKKDCTGSSLASSASSKQ 323

Query: 1176 VTSGTPFCKKSKQPADKSWLQWTEKYRPKVPTDLVGNQSLVKQLHDWLKQWDDQFLNTTS 1355
            + S     ++ KQ  + S   WTEKYRPKVP D++GNQSLVKQLHDWL  W++QFL+T  
Sbjct: 324  LQSDASLARRKKQTTEHSTFTWTEKYRPKVPNDIIGNQSLVKQLHDWLSHWNEQFLDTGD 383

Query: 1356 KGKGKKQNDSGAKKAVLLSGTPGIGKTTSAKIVSQMLGFQAVEVNASDSRGKADAKIQKG 1535
            K KGK   +SGAKKAVLLSGTPGIGKTTSAK+VSQMLGFQA+EVNASDSRGKAD+KI+KG
Sbjct: 384  KKKGKNPTNSGAKKAVLLSGTPGIGKTTSAKLVSQMLGFQAIEVNASDSRGKADSKIEKG 443

Query: 1536 IGGSTANSIKELVSNNSLGLTLDRPHQTKTVLIMDEVDGMSGGDRGGVADLXXXXXXXXX 1715
            IGGS ANSIKELVSN +L  ++D     KTVLIMDEVDGMS GDRGGVADL         
Sbjct: 444  IGGSNANSIKELVSNKAL--SMDGSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKI 501

Query: 1716 XXXXXXNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLMHVAKAEGVKVNEIALEELASR 1895
                  NDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLM VA AEG++VNE+ALEELA +
Sbjct: 502  PIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLMQVANAEGLQVNEVALEELAEK 561

Query: 1896 VNGDMRMALNQLQYMSLSNSEIGYDNIRQRLQNSSKDEDISPFTAVDKLF--TADKLRMD 2069
            VNGDMRMA+NQLQYMSLS S I YD++RQRL +SSKDEDISPFTAVDKLF   A KLRMD
Sbjct: 562  VNGDMRMAVNQLQYMSLSMSVIKYDDVRQRLLSSSKDEDISPFTAVDKLFGFNAGKLRMD 621

Query: 2070 ERIDLSMSDPDLVPLLIQENYINFRPRSLGGYNRSKMDNAKQSEEEIRHLNLLSRAADSI 2249
            ER+DLSMSDPDLVPLLIQENYIN+RP +           A + +  I+ +NL++RAA+SI
Sbjct: 622  ERVDLSMSDPDLVPLLIQENYINYRPSA-----------AVKDDSGIKRMNLIARAAESI 670

Query: 2250 ADGDIVNVQIRRYQRWQLSQTSVLASCIIPSMLLHGQRQTLEQGERNFNRFGGWLGKNST 2429
             +GDI NVQIR+Y++WQLSQ++ L+S IIP+ LL GQR+TLEQGERNFNRFGGWLGKNST
Sbjct: 671  GNGDIFNVQIRKYRQWQLSQSASLSSSIIPAALLRGQRETLEQGERNFNRFGGWLGKNST 730

Query: 2430 LGKNYRLLEDLHVHLLASCESYMGRMALRLDHLTLLKKQLTDPLRQLAKDEAVEKVVEFM 2609
            LGKN RLLEDLHVHLLAS ES  GR  +R+++L+LL K+LT PLR+L KDEAV++VVEFM
Sbjct: 731  LGKNRRLLEDLHVHLLASRESSSGRETVRVEYLSLLLKRLTMPLRELPKDEAVQEVVEFM 790

Query: 2610 XXXXXXXXXXXXXMEISKFQGHPNPLEGVQPTVKTALTKAYNKGSKSRVIRTADLITLPG 2789
                         +E+SK+QGHPNPL+G+ P VK ALTKAY +GSK+R++R AD +T+PG
Sbjct: 791  NTYSISQDDFDTIVELSKYQGHPNPLDGIVPAVKAALTKAYKEGSKTRMVRAADFVTIPG 850

Query: 2790 IKKAPKKRIAAMLEPVDEGIAEETDGTLLGNEDENSSETEDLEDSNDAEKLQSDLQSLNR 2969
            +KKAPKKRIAA+LEP D+ I E  D TL+ +EDENSS+TEDLE S   EKLQ +LQSLN 
Sbjct: 851  MKKAPKKRIAALLEPSDDAIGENIDDTLVQSEDENSSDTEDLEGSAVGEKLQKELQSLNT 910

Query: 2970 KGIQVDMDLKVSGKASAKKTPASRGKKNAEAA 3065
            KG+QV  DLK +   SAKKTPA RG+  + AA
Sbjct: 911  KGVQVQFDLKGAPNTSAKKTPAGRGRGGSAAA 942


>XP_009361447.1 PREDICTED: replication factor C subunit 1 isoform X1 [Pyrus x
            bretschneideri]
          Length = 962

 Score = 1054 bits (2725), Expect = 0.0
 Identities = 577/994 (58%), Positives = 688/994 (69%), Gaps = 13/994 (1%)
 Frame = +3

Query: 123  LEMSDIRKWFMKQHDKSPGDGKAPKPVVPA-SQPNKSGSAGQEASGRRKTSKYFASDXXX 299
            +  +DIRKWFMK HDK  G+ K P+  V   ++P +    GQE SGRRKTSKYF +D   
Sbjct: 1    MSQADIRKWFMKSHDK--GNTKKPEATVSQKTEPKEPVQGGQENSGRRKTSKYFPTDKPK 58

Query: 300  XXXXXXXXXXXXRKASNVGNEQSVK-----KVHKIEXXXXXXLVLAAPTKTSIGASPNKK 464
                        ++  +   ++SVK     K HK++       V     K S+ A+P+KK
Sbjct: 59   DEKGTTEVPA--KRKPHKDPDESVKPSPAKKAHKVDDDDDDDFVSPNSKKKSVDATPSKK 116

Query: 465  LKGASGRGITRKXXXXXXXXXXXXKTRKS-LKPVXXXXXXXXXPKTPVHXXXXXXXXXXX 641
            LK  SG GI +K            K  +S LKP             P             
Sbjct: 117  LKSTSGTGIPQKVRAIDDGGDEDEKVAESSLKPAGRGRGGRGASAAPA------------ 164

Query: 642  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERKDPPHKGEKEIPEGKRDCLAG 821
                                            FMNFGERKDPPHKGEKE+PEG  +CLAG
Sbjct: 165  ---------------------GGRGRGAGRGGFMNFGERKDPPHKGEKEVPEGAPNCLAG 203

Query: 822  LTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTSYLLCDEDIEGKKSEKAKELGTTF 1001
            LTFVISGTLDSLEREEAEDLIKRHGGR+TGSVSKKT+YLLCDEDIEG+KS KAKELGT F
Sbjct: 204  LTFVISGTLDSLEREEAEDLIKRHGGRITGSVSKKTNYLLCDEDIEGRKSSKAKELGTAF 263

Query: 1002 LTEDALFDMIRKSNKSLTSPKEEKKALNKVAPSPAKGSPIKSETTSTE----KVQAGNSA 1169
            LTED LF MIR S  +    +E KK+++  A +       K  T   +     + +  S+
Sbjct: 264  LTEDGLFGMIRASIGAKVPVQEAKKSVDDAAAASLHSKSPKKVTLKKDCTGSSLASSASS 323

Query: 1170 AKVTSGTPFCKKSKQPADKSWLQWTEKYRPKVPTDLVGNQSLVKQLHDWLKQWDDQFLNT 1349
             ++ S     ++ KQ  + S   WTEKYRPKVP D++GNQSLVKQLHDWL  W++QFL+T
Sbjct: 324  KQLQSDASLARRKKQTTEHSTFTWTEKYRPKVPNDIIGNQSLVKQLHDWLSHWNEQFLDT 383

Query: 1350 TSKGKGKKQNDSGAKKAVLLSGTPGIGKTTSAKIVSQMLGFQAVEVNASDSRGKADAKIQ 1529
              K KGK   +SGAKKAVLLSGTPGIGKTTSAK+VSQMLGFQA+EVNASDSRGKAD+KI+
Sbjct: 384  GDKKKGKNPTNSGAKKAVLLSGTPGIGKTTSAKLVSQMLGFQAIEVNASDSRGKADSKIE 443

Query: 1530 KGIGGSTANSIKELVSNNSLGLTLDRPHQTKTVLIMDEVDGMSGGDRGGVADLXXXXXXX 1709
            KGIGGS ANSIKELVSN +L  ++D     KTVLIMDEVDGMS GDRGGVADL       
Sbjct: 444  KGIGGSNANSIKELVSNKAL--SMDGSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKIS 501

Query: 1710 XXXXXXXXNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLMHVAKAEGVKVNEIALEELA 1889
                    NDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLM VA AEG++VNE+ALEELA
Sbjct: 502  KIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLMQVANAEGLQVNEVALEELA 561

Query: 1890 SRVNGDMRMALNQLQYMSLSNSEIGYDNIRQRLQNSSKDEDISPFTAVDKLF--TADKLR 2063
             +VNGDMRMA+NQLQYMSLS S I YD++RQRL +SSKDEDISPFTAVDKLF   A KLR
Sbjct: 562  EKVNGDMRMAVNQLQYMSLSMSVIKYDDVRQRLLSSSKDEDISPFTAVDKLFGFNAGKLR 621

Query: 2064 MDERIDLSMSDPDLVPLLIQENYINFRPRSLGGYNRSKMDNAKQSEEEIRHLNLLSRAAD 2243
            MDER+DLSMSDPDLVPLLIQENYIN+RP +           A + +  I+ +NL++RAA+
Sbjct: 622  MDERVDLSMSDPDLVPLLIQENYINYRPSA-----------AVKDDSGIKRMNLIARAAE 670

Query: 2244 SIADGDIVNVQIRRYQRWQLSQTSVLASCIIPSMLLHGQRQTLEQGERNFNRFGGWLGKN 2423
            SI +GDI NVQIR+Y++WQLSQ++ L+S IIP+ LL GQR+TLEQGERNFNRFGGWLGKN
Sbjct: 671  SIGNGDIFNVQIRKYRQWQLSQSASLSSSIIPAALLRGQRETLEQGERNFNRFGGWLGKN 730

Query: 2424 STLGKNYRLLEDLHVHLLASCESYMGRMALRLDHLTLLKKQLTDPLRQLAKDEAVEKVVE 2603
            STLGKN RLLEDLHVHLLAS ES  GR  +R+++L+LL K+LT PLR+L KDEAV++VVE
Sbjct: 731  STLGKNRRLLEDLHVHLLASRESSSGRETVRVEYLSLLLKRLTMPLRELPKDEAVQEVVE 790

Query: 2604 FMXXXXXXXXXXXXXMEISKFQGHPNPLEGVQPTVKTALTKAYNKGSKSRVIRTADLITL 2783
            FM             +E+SK+QGHPNPL+G+ P VK ALTKAY +GSK+R++R AD +T+
Sbjct: 791  FMNTYSISQDDFDTIVELSKYQGHPNPLDGIVPAVKAALTKAYKEGSKTRMVRAADFVTI 850

Query: 2784 PGIKKAPKKRIAAMLEPVDEGIAEETDGTLLGNEDENSSETEDLEDSNDAEKLQSDLQSL 2963
            PG+KKAPKKRIAA+LEP D+ I E  D TL+ +EDENSS+TEDLE S   EKLQ +LQSL
Sbjct: 851  PGMKKAPKKRIAALLEPSDDAIGENIDDTLVQSEDENSSDTEDLEGSAVGEKLQKELQSL 910

Query: 2964 NRKGIQVDMDLKVSGKASAKKTPASRGKKNAEAA 3065
            N KG+QV  DLK +   SAKKTPA RG+  + AA
Sbjct: 911  NTKGVQVQFDLKGAPNTSAKKTPAGRGRGGSAAA 944


>XP_008237209.1 PREDICTED: replication factor C subunit 1 isoform X2 [Prunus mume]
          Length = 973

 Score = 1052 bits (2721), Expect = 0.0
 Identities = 588/1000 (58%), Positives = 686/1000 (68%), Gaps = 19/1000 (1%)
 Frame = +3

Query: 123  LEMSDIRKWFMKQHDKSPGDGKAPKPVVPAS------QPNKSGSAGQEASGRRKTSKYFA 284
            +  +DIRKWFMK HDK  G+GK P P    +      +P +    GQE SGRRKTSKYF 
Sbjct: 1    MSQADIRKWFMKSHDK--GNGKKPAPTTSQTPSTAKEEPKEPVQGGQENSGRRKTSKYFT 58

Query: 285  SDXXXXXXXXXXXXXXXRKASNVGNEQ----SVKKVHKIEXXXXXXLVLAAPTKTSIGAS 452
            +D               RK     +E       KKVHK+        VL    K S+ A+
Sbjct: 59   TDKPKAEKETEVPAK--RKTHKEPDESVKPSPAKKVHKV-VDDDDDFVLPHLKKNSVDAT 115

Query: 453  PNKKLKGASGRGITRKXXXXXXXXXXXXKTRKSL-KPVXXXXXXXXXPKTPVHXXXXXXX 629
            P+KKLK ASG G+ +K            K  +SL KP             P         
Sbjct: 116  PSKKLKSASGVGVPQKLTAIDEGGDDDVKDAESLQKPGGRGRGGRGTSAGPA-------- 167

Query: 630  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERKDPPHKGEKEIPEGKRD 809
                                                FMNFG+RKDPPHKGEKE+PEG  D
Sbjct: 168  ---------------GGRGTSAGPAGGRGRGAGRGGFMNFGDRKDPPHKGEKEVPEGAPD 212

Query: 810  CLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTSYLLCDEDIEGKKSEKAKEL 989
            CLAGLTFVISGTLDSLEREEAEDLIKRHGGR+TGSVSKKT+YLLCDEDIEG+KS KAKEL
Sbjct: 213  CLAGLTFVISGTLDSLEREEAEDLIKRHGGRITGSVSKKTNYLLCDEDIEGRKSSKAKEL 272

Query: 990  GTTFLTEDALFDMIRKSNKSLTSPKEEKKALNKVAPSPAKGSPIKSETTSTEKVQAGNSA 1169
            GT FLTED LFDMIR S  +  S +E KK+++  A   A   P K       K  AG+S 
Sbjct: 273  GTAFLTEDGLFDMIRASIHAKVSVQEAKKSVDDAA---AASLPKKIPNKVASKNCAGSSM 329

Query: 1170 A------KVTSGTPFCKKSKQPADKSWLQWTEKYRPKVPTDLVGNQSLVKQLHDWLKQWD 1331
            A      ++ S     ++ KQ  + S   WTEKYRPKVP D++GNQSLVKQLHDWL  W 
Sbjct: 330  ASSVSHKQLESDASHARRKKQTTEHSASTWTEKYRPKVPNDIIGNQSLVKQLHDWLAHWH 389

Query: 1332 DQFLNTTSKGKGKKQNDSGAKKAVLLSGTPGIGKTTSAKIVSQMLGFQAVEVNASDSRGK 1511
            +QFL+T +K KGK   +SGAKKAVLLSGTPGIGKTTSAK+VSQMLGFQ +EVNASDSRGK
Sbjct: 390  EQFLDTGNKKKGKNPTNSGAKKAVLLSGTPGIGKTTSAKLVSQMLGFQTIEVNASDSRGK 449

Query: 1512 ADAKIQKGIGGSTANSIKELVSNNSLGLTLDRPHQTKTVLIMDEVDGMSGGDRGGVADLX 1691
            AD+KI+KGIGGS ANSIKELVSN +L  ++D     KTVLIMDEVDGMS GDRGGVADL 
Sbjct: 450  ADSKIEKGIGGSNANSIKELVSNKAL--SMDGLKHPKTVLIMDEVDGMSAGDRGGVADLI 507

Query: 1692 XXXXXXXXXXXXXXNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLMHVAKAEGVKVNEI 1871
                          NDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLM +A AEG+KVNEI
Sbjct: 508  ASIKISKIPVICICNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLMQIANAEGLKVNEI 567

Query: 1872 ALEELASRVNGDMRMALNQLQYMSLSNSEIGYDNIRQRLQNSSKDEDISPFTAVDKLF-- 2045
            ALEELA +VNGDMRMA+NQLQYMSLS S I YD++RQRL +S+KDEDISPFTAVDKLF  
Sbjct: 568  ALEELAEKVNGDMRMAVNQLQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFTAVDKLFGF 627

Query: 2046 TADKLRMDERIDLSMSDPDLVPLLIQENYINFRPRSLGGYNRSKMDNAKQSEEEIRHLNL 2225
             A KLRMDER+DLSMSDPDLVPLLIQENYIN+RP S           A + +  I+ +NL
Sbjct: 628  NAGKLRMDERVDLSMSDPDLVPLLIQENYINYRPSS-----------AVKDDSGIKRMNL 676

Query: 2226 LSRAADSIADGDIVNVQIRRYQRWQLSQTSVLASCIIPSMLLHGQRQTLEQGERNFNRFG 2405
            ++RAA+SI +GDI NVQIR+Y++WQLSQ++ L+S I P+ LL GQR+TLEQGERNFNRFG
Sbjct: 677  IARAAESIGNGDIFNVQIRKYRQWQLSQSACLSSSIFPAALLRGQRETLEQGERNFNRFG 736

Query: 2406 GWLGKNSTLGKNYRLLEDLHVHLLASCESYMGRMALRLDHLTLLKKQLTDPLRQLAKDEA 2585
            GWLGKNSTLGKN RLLEDLHVHLLAS ES  GR  LR+++L+LL K+LT PLR+L KDEA
Sbjct: 737  GWLGKNSTLGKNLRLLEDLHVHLLASRESSSGRETLRVEYLSLLLKRLTVPLRELPKDEA 796

Query: 2586 VEKVVEFMXXXXXXXXXXXXXMEISKFQGHPNPLEGVQPTVKTALTKAYNKGSKSRVIRT 2765
            V KVV+FM             +E+SKFQGHPNPL+G+QP VK ALTKAY +GSK+R++R 
Sbjct: 797  VHKVVDFMNAYSISQDDFDTIVELSKFQGHPNPLDGIQPAVKAALTKAYKEGSKTRMVRA 856

Query: 2766 ADLITLPGIKKAPKKRIAAMLEPVDEGIAEETDGTLLGNEDENSSETEDLEDSNDAEKLQ 2945
            AD ITLPG+KKAPKKRIAA+LEP  + I E  D TL+ +E+ENSS+TEDLE S   EKLQ
Sbjct: 857  ADFITLPGMKKAPKKRIAAILEPSVDVIGENNDDTLVESEEENSSDTEDLEGSAAGEKLQ 916

Query: 2946 SDLQSLNRKGIQVDMDLKVSGKASAKKTPASRGKKNAEAA 3065
             +LQSLN KG+ V  DLK +  +SAKKTP  RG+  + AA
Sbjct: 917  QELQSLNTKGVHVQFDLKGATNSSAKKTPTGRGRGGSSAA 956


>XP_008237211.1 PREDICTED: replication factor C subunit 1 isoform X3 [Prunus mume]
          Length = 964

 Score = 1051 bits (2717), Expect = 0.0
 Identities = 589/1001 (58%), Positives = 690/1001 (68%), Gaps = 20/1001 (1%)
 Frame = +3

Query: 123  LEMSDIRKWFMKQHDKSPGDGKAPKPVVPAS------QPNKSGSAGQEASGRRKTSKYFA 284
            +  +DIRKWFMK HDK  G+GK P P    +      +P +    GQE SGRRKTSKYF 
Sbjct: 1    MSQADIRKWFMKSHDK--GNGKKPAPTTSQTPSTAKEEPKEPVQGGQENSGRRKTSKYFT 58

Query: 285  SDXXXXXXXXXXXXXXXRKASNVGNEQ----SVKKVHKIEXXXXXXLVLAAPTKTSIGAS 452
            +D               RK     +E       KKVHK+        VL    K S+ A+
Sbjct: 59   TDKPKAEKETEVPAK--RKTHKEPDESVKPSPAKKVHKV-VDDDDDFVLPHLKKNSVDAT 115

Query: 453  PNKKLKGASGRGITRKXXXXXXXXXXXXKTRKSL-KPVXXXXXXXXXPKTPVHXXXXXXX 629
            P+KKLK ASG G+ +K            K  +SL KP             P         
Sbjct: 116  PSKKLKSASGVGVPQKLTAIDEGGDDDVKDAESLQKPGGRGRGGRGTSAGPA-------- 167

Query: 630  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERKDPPHKGEKEIPEGKRD 809
                                                FMNFG+RKDPPHKGEKE+PEG  D
Sbjct: 168  -------------------------GGRGRGAGRGGFMNFGDRKDPPHKGEKEVPEGAPD 202

Query: 810  CLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTSYLLCDEDIEGKKSEKAKEL 989
            CLAGLTFVISGTLDSLEREEAEDLIKRHGGR+TGSVSKKT+YLLCDEDIEG+KS KAKEL
Sbjct: 203  CLAGLTFVISGTLDSLEREEAEDLIKRHGGRITGSVSKKTNYLLCDEDIEGRKSSKAKEL 262

Query: 990  GTTFLTEDALFDMIRKSNKSLTSPKEEKKALNKVAP-SPAKGSPIKSETTSTEKVQAGNS 1166
            GT FLTED LFDMIR S  +  S +E KK+++  A  S  K  P K    +++K  AG+S
Sbjct: 263  GTAFLTEDGLFDMIRASIHAKVSVQEAKKSVDDAAAASLPKKIPNK---VASKKDCAGSS 319

Query: 1167 AA------KVTSGTPFCKKSKQPADKSWLQWTEKYRPKVPTDLVGNQSLVKQLHDWLKQW 1328
             A      ++ S     ++ KQ  + S   WTEKYRPKVP D++GNQSLVKQLHDWL  W
Sbjct: 320  MASSVSHKQLESDASHARRKKQTTEHSASTWTEKYRPKVPNDIIGNQSLVKQLHDWLAHW 379

Query: 1329 DDQFLNTTSKGKGKKQNDSGAKKAVLLSGTPGIGKTTSAKIVSQMLGFQAVEVNASDSRG 1508
             +QFL+T +K KGK   +SGAKKAVLLSGTPGIGKTTSAK+VSQMLGFQ +EVNASDSRG
Sbjct: 380  HEQFLDTGNKKKGKNPTNSGAKKAVLLSGTPGIGKTTSAKLVSQMLGFQTIEVNASDSRG 439

Query: 1509 KADAKIQKGIGGSTANSIKELVSNNSLGLTLDRPHQTKTVLIMDEVDGMSGGDRGGVADL 1688
            KAD+KI+KGIGGS ANSIKELVSN +L  ++D     KTVLIMDEVDGMS GDRGGVADL
Sbjct: 440  KADSKIEKGIGGSNANSIKELVSNKAL--SMDGLKHPKTVLIMDEVDGMSAGDRGGVADL 497

Query: 1689 XXXXXXXXXXXXXXXNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLMHVAKAEGVKVNE 1868
                           NDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLM +A AEG+KVNE
Sbjct: 498  IASIKISKIPVICICNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLMQIANAEGLKVNE 557

Query: 1869 IALEELASRVNGDMRMALNQLQYMSLSNSEIGYDNIRQRLQNSSKDEDISPFTAVDKLF- 2045
            IALEELA +VNGDMRMA+NQLQYMSLS S I YD++RQRL +S+KDEDISPFTAVDKLF 
Sbjct: 558  IALEELAEKVNGDMRMAVNQLQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFTAVDKLFG 617

Query: 2046 -TADKLRMDERIDLSMSDPDLVPLLIQENYINFRPRSLGGYNRSKMDNAKQSEEEIRHLN 2222
              A KLRMDER+DLSMSDPDLVPLLIQENYIN+RP S           A + +  I+ +N
Sbjct: 618  FNAGKLRMDERVDLSMSDPDLVPLLIQENYINYRPSS-----------AVKDDSGIKRMN 666

Query: 2223 LLSRAADSIADGDIVNVQIRRYQRWQLSQTSVLASCIIPSMLLHGQRQTLEQGERNFNRF 2402
            L++RAA+SI +GDI NVQIR+Y++WQLSQ++ L+S I P+ LL GQR+TLEQGERNFNRF
Sbjct: 667  LIARAAESIGNGDIFNVQIRKYRQWQLSQSACLSSSIFPAALLRGQRETLEQGERNFNRF 726

Query: 2403 GGWLGKNSTLGKNYRLLEDLHVHLLASCESYMGRMALRLDHLTLLKKQLTDPLRQLAKDE 2582
            GGWLGKNSTLGKN RLLEDLHVHLLAS ES  GR  LR+++L+LL K+LT PLR+L KDE
Sbjct: 727  GGWLGKNSTLGKNLRLLEDLHVHLLASRESSSGRETLRVEYLSLLLKRLTVPLRELPKDE 786

Query: 2583 AVEKVVEFMXXXXXXXXXXXXXMEISKFQGHPNPLEGVQPTVKTALTKAYNKGSKSRVIR 2762
            AV KVV+FM             +E+SKFQGHPNPL+G+QP VK ALTKAY +GSK+R++R
Sbjct: 787  AVHKVVDFMNAYSISQDDFDTIVELSKFQGHPNPLDGIQPAVKAALTKAYKEGSKTRMVR 846

Query: 2763 TADLITLPGIKKAPKKRIAAMLEPVDEGIAEETDGTLLGNEDENSSETEDLEDSNDAEKL 2942
             AD ITLPG+KKAPKKRIAA+LEP  + I E  D TL+ +E+ENSS+TEDLE S   EKL
Sbjct: 847  AADFITLPGMKKAPKKRIAAILEPSVDVIGENNDDTLVESEEENSSDTEDLEGSAAGEKL 906

Query: 2943 QSDLQSLNRKGIQVDMDLKVSGKASAKKTPASRGKKNAEAA 3065
            Q +LQSLN KG+ V  DLK +  +SAKKTP  RG+  + AA
Sbjct: 907  QQELQSLNTKGVHVQFDLKGATNSSAKKTPTGRGRGGSSAA 947


>CDP15576.1 unnamed protein product [Coffea canephora]
          Length = 1020

 Score = 1034 bits (2673), Expect = 0.0
 Identities = 547/803 (68%), Positives = 634/803 (78%), Gaps = 26/803 (3%)
 Frame = +3

Query: 738  FMNFGERKDPPHKGEKEIPEGKRDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 917
            FMNFGERKDPPHKGEKEIPEG  DCL GLTFVISGTLDSLERE+AE LIKR+GGRVTGSV
Sbjct: 218  FMNFGERKDPPHKGEKEIPEGAPDCLTGLTFVISGTLDSLEREDAEALIKRYGGRVTGSV 277

Query: 918  SKKTSYLLCDEDIEGKKSEKAKELGTTFLTEDALFDMIRKSNKSLTS-PKEEKKALNKVA 1094
            SKKT+YL+CDEDIEG+KS KAKELGT FLTED L DMIRKSNKS T+ P+E KK ++KV 
Sbjct: 278  SKKTNYLVCDEDIEGRKSTKAKELGTAFLTEDGLLDMIRKSNKSKTTEPQELKKPVDKVL 337

Query: 1095 PSPAKGSPIKSE-----TTSTEKVQAGNSAAKVTSGTPFCKKSKQPADKSWLQWTEKYRP 1259
            PS  K +P  +      + ST+      S+A VTS     K   Q  +++WL WTEKYRP
Sbjct: 338  PSSKKSTPTPASKNHVGSLSTKGAAVKGSSASVTSA----KLKSQATEEAWLPWTEKYRP 393

Query: 1260 KVPTDLVGNQSLVKQLHDWLKQWDDQFLNTTSKGKGKKQNDSGAKKAVLLSGTPGIGKTT 1439
            KVP D++GNQS+VKQLHDWL+ W++QFL T+SK  GKKQNDSGAKKAVLLSGTPGIGKTT
Sbjct: 394  KVPNDIIGNQSVVKQLHDWLRSWNEQFLKTSSKNGGKKQNDSGAKKAVLLSGTPGIGKTT 453

Query: 1440 SAKIVSQMLGFQAVEVNASDSRGKADAKIQKGIGGSTANSIKELVSNNSLGLTLDRPHQT 1619
            +AK+VSQMLGF+ +EVNASD+RGKADAKI KGIGGSTANSIKE++SN  LGL ++R    
Sbjct: 454  TAKLVSQMLGFRTIEVNASDNRGKADAKIGKGIGGSTANSIKEVISNEGLGLNMERSQHP 513

Query: 1620 KTVLIMDEVDGMSGGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCLLLSFRK 1799
            KTVLIMDEVDGMS GDRGGVADL               NDRYSQKLKSLVNYCLLLSFRK
Sbjct: 514  KTVLIMDEVDGMSAGDRGGVADLIASIKISSIPIICICNDRYSQKLKSLVNYCLLLSFRK 573

Query: 1800 PTKQQMAKRLMHVAKAEGVKVNEIALEELASRVNGDMRMALNQLQYMSLSNSEIGYDNIR 1979
            PTKQQMAKRL+HVA AEG++VNEIALEELA RVNGDMRMALN LQYMSLS S I YD+IR
Sbjct: 574  PTKQQMAKRLLHVANAEGLQVNEIALEELAERVNGDMRMALNHLQYMSLSMSVIKYDDIR 633

Query: 1980 QRLQNSSKDEDISPFTAVDKL--FTADKLRMDERIDLSMSDPDLVPLLIQENYINFRPRS 2153
            QRLQ+SSKDEDISPF AVDKL  F A KLRMDER DLSMSDPDLVPLL+QENYIN+RP S
Sbjct: 634  QRLQSSSKDEDISPFVAVDKLFGFNAGKLRMDERFDLSMSDPDLVPLLVQENYINYRPSS 693

Query: 2154 LGGYNRSKMDNAKQSEEEIRHLNLLSRAADSIADGDIVNVQIRRYQRWQLSQTSVLASCI 2333
             G     K DN       ++ ++LL+RAA+SIA+GDI+NVQIRRYQ+WQLSQ S L+SCI
Sbjct: 694  AG-----KDDNG------LKRMSLLARAAESIANGDIMNVQIRRYQQWQLSQASSLSSCI 742

Query: 2334 IPSMLLHGQRQTLEQGERNFNRFGGWLGKNSTLGKNYRLLEDLHVHLLASCESYMGRMAL 2513
            IP+ LLHGQR+TLEQGERNFNRFGGWLGKNST+GKNYRLLED+HVHLLAS ESY+GR  L
Sbjct: 743  IPASLLHGQRETLEQGERNFNRFGGWLGKNSTMGKNYRLLEDMHVHLLASRESYLGRSTL 802

Query: 2514 RLDHLTLLKKQLTDPLRQLAKDEAVEKVVEFMXXXXXXXXXXXXXMEISKFQGHPNPLEG 2693
            RLD+LTLL KQLT P+R L KDEAVEKVV FM             +EISKF+GHP+P++G
Sbjct: 803  RLDYLTLLSKQLTHPVRVLPKDEAVEKVVNFMDSYSISQEDFDTILEISKFKGHPSPMDG 862

Query: 2694 VQPTVKTALTKAYNKGSKSRVIRTADLIT-----------------LPGIKKAPKKRIAA 2822
            VQP VK ALTKAY  G+ SR IRTAD++T                 +PG KKA KKR+AA
Sbjct: 863  VQPAVKAALTKAYKIGTDSRKIRTADMVTVQKRDGSSSHVIKTADMVPGTKKALKKRVAA 922

Query: 2823 MLEPVDEGIAEETDGTLLGNEDENSSETEDLEDSNDAEK-LQSDLQSLNRKGIQVDMDLK 2999
            MLEPV+E +AEE +G  L   ++NSS+ EDLEDS++ +K LQ+DLQSL  KGI+V ++LK
Sbjct: 923  MLEPVEESLAEE-NGDALEENEKNSSDAEDLEDSDNTDKGLQADLQSLKSKGIEVQLNLK 981

Query: 3000 VSGKASAKKTPASRGKKNAEAAD 3068
             S  +SAKK  ++RGK+++E A+
Sbjct: 982  GSENSSAKKGSSARGKRSSEPAE 1004



 Score = 65.9 bits (159), Expect = 4e-07
 Identities = 51/132 (38%), Positives = 66/132 (50%), Gaps = 16/132 (12%)
 Frame = +3

Query: 153 MKQHDKSP-GDGKAPKP------VVPASQPNKSGSAGQEASGRRKTSKYFASDXXXXXXX 311
           MKQH+KS  G+G A KP       V AS+ + S   GQE++ RRKTSKYFASD       
Sbjct: 1   MKQHEKSSAGNGNAAKPKTAEKPAVAASRLDDSVKEGQESASRRKTSKYFASDKQNAKDA 60

Query: 312 XXXXXXXXRKASNVGNEQ--------SVKKVHKIE-XXXXXXLVLAAPTKTSIGASPNKK 464
                   ++ + + +++          KKVHK E        V   P K S   +P+KK
Sbjct: 61  KEIEEFSAKRKAPMASKEIHGDVKPPPGKKVHKNEDDDNDEDFVDTTPRKVS---TPSKK 117

Query: 465 LKGASGRGITRK 500
           LK  SGRGI RK
Sbjct: 118 LKSGSGRGIARK 129


>XP_010651545.1 PREDICTED: replication factor C subunit 1 [Vitis vinifera] CBI24290.3
            unnamed protein product, partial [Vitis vinifera]
          Length = 941

 Score = 1033 bits (2670), Expect = 0.0
 Identities = 540/779 (69%), Positives = 619/779 (79%), Gaps = 3/779 (0%)
 Frame = +3

Query: 738  FMNFGERKDPPHKGEKEIPEGKRDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 917
            FMNFGERKDPPHKGEKE+PEG  DCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV
Sbjct: 158  FMNFGERKDPPHKGEKEVPEGASDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 217

Query: 918  SKKTSYLLCDEDIEGKKSEKAKELGTTFLTEDALFDMIRKSNKSLTSPK-EEKKALNKVA 1094
            SKKT++LLCDEDI G KS KAKELGT FLTED LFDMI  SN +    + E KK+L+KV 
Sbjct: 218  SKKTNFLLCDEDIGGNKSAKAKELGTAFLTEDGLFDMICASNHAKAPARGEPKKSLDKVV 277

Query: 1095 PSPAKGSPIKSETTSTEKVQAGNSAAKVTSGTPFCKKSKQPADKSWLQWTEKYRPKVPTD 1274
             +  K SP K E    + V +      + + TP  K   Q    + L WTEKY+PKVP D
Sbjct: 278  LATPKKSPQKVEKKVDQVVNSSGKRTVLAATTP--KHIYQTIGHASLTWTEKYKPKVPND 335

Query: 1275 LVGNQSLVKQLHDWLKQWDDQFLNTTSKGKGKKQNDSGAKKAVLLSGTPGIGKTTSAKIV 1454
            ++GNQSLVKQLH+WL  W++QFL+T +KGKGKKQNDSGAKKAVLLSGTPGIGKTTSAK+V
Sbjct: 336  IIGNQSLVKQLHEWLAHWNEQFLHTGTKGKGKKQNDSGAKKAVLLSGTPGIGKTTSAKLV 395

Query: 1455 SQMLGFQAVEVNASDSRGKADAKIQKGIGGSTANSIKELVSNNSLGLTLDRPHQTKTVLI 1634
            SQMLGFQA+EVNASD+RGKA+AKI KGIGGS ANSIKELVSN +LG  +DR    KTVLI
Sbjct: 396  SQMLGFQAIEVNASDNRGKANAKIDKGIGGSNANSIKELVSNEALGAHMDRSKHPKTVLI 455

Query: 1635 MDEVDGMSGGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCLLLSFRKPTKQQ 1814
            MDEVDGMS GDRGGVADL               NDRYSQKLKSLVNYCLLLSFRKPTKQQ
Sbjct: 456  MDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQ 515

Query: 1815 MAKRLMHVAKAEGVKVNEIALEELASRVNGDMRMALNQLQYMSLSNSEIGYDNIRQRLQN 1994
            MAKRL+ VA AEG++VNEIALEELA RVNGDMRMALNQLQYMSLS S I YD++RQRL +
Sbjct: 516  MAKRLLQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSVIKYDDVRQRLLS 575

Query: 1995 SSKDEDISPFTAVDKL--FTADKLRMDERIDLSMSDPDLVPLLIQENYINFRPRSLGGYN 2168
            S+KDEDISPF AVDKL  F   KLRMDERIDLSMSDPDLVPLLIQENYIN+RP   G   
Sbjct: 576  SAKDEDISPFVAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPTLAG--- 632

Query: 2169 RSKMDNAKQSEEEIRHLNLLSRAADSIADGDIVNVQIRRYQRWQLSQTSVLASCIIPSML 2348
              K DN       ++ ++LL+RAA+SI DGDI+NVQIRRY++WQLSQ    ASCI P+ L
Sbjct: 633  --KDDNG------VKRMSLLARAAESIGDGDIINVQIRRYRQWQLSQAGSFASCITPAAL 684

Query: 2349 LHGQRQTLEQGERNFNRFGGWLGKNSTLGKNYRLLEDLHVHLLASCESYMGRMALRLDHL 2528
            LHGQR+TLEQGERNFNRFGGWLGKNST+GKN RLLEDLHVHLLAS ES  GR  LR+D+L
Sbjct: 685  LHGQRETLEQGERNFNRFGGWLGKNSTMGKNKRLLEDLHVHLLASRESNSGRGTLRIDYL 744

Query: 2529 TLLKKQLTDPLRQLAKDEAVEKVVEFMXXXXXXXXXXXXXMEISKFQGHPNPLEGVQPTV 2708
            TL+ K+LTDPLR L KD+AV+KVVEFM             +E+SKFQGHP+PLEG+QP V
Sbjct: 745  TLILKRLTDPLRMLPKDDAVQKVVEFMDLYSISQEDFDTIVELSKFQGHPSPLEGIQPAV 804

Query: 2709 KTALTKAYNKGSKSRVIRTADLITLPGIKKAPKKRIAAMLEPVDEGIAEETDGTLLGNED 2888
            K+ALTKAYNKGS SR++R ADLITLPGIKKAPKKRIAA+LEPVD+ +A E    L  +E+
Sbjct: 805  KSALTKAYNKGSSSRLVRAADLITLPGIKKAPKKRIAAILEPVDDELARENGDALAESEE 864

Query: 2889 ENSSETEDLEDSNDAEKLQSDLQSLNRKGIQVDMDLKVSGKASAKKTPASRGKKNAEAA 3065
            ENSS+T+D++ +N  +KL  DLQ+LN KGI+V++DLK +G +SAKKTPA RG+    A+
Sbjct: 865  ENSSDTDDMDTANGDKKLPVDLQNLNSKGIKVELDLKGAGSSSAKKTPAGRGRGGGSAS 923


>XP_018851841.1 PREDICTED: replication factor C subunit 1 [Juglans regia]
          Length = 954

 Score = 1032 bits (2668), Expect = 0.0
 Identities = 540/775 (69%), Positives = 620/775 (80%), Gaps = 5/775 (0%)
 Frame = +3

Query: 738  FMNFGERKDPPHKGEKEIPEGKRDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 917
            FMNFGERKDPPHKGEKE+PEG  +CLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV
Sbjct: 174  FMNFGERKDPPHKGEKEVPEGTPNCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 233

Query: 918  SKKTSYLLCDEDIEGKKSEKAKELGTTFLTEDALFDMIRKSNKSLTSPKEEKKALNKVAP 1097
            SKKT+YLLCDEDI G+KS KAKELGTT LTED LFDMIR S  +    +E K+ + K AP
Sbjct: 234  SKKTNYLLCDEDIGGRKSAKAKELGTTMLTEDGLFDMIRASKPA---QEESKRPVYKAAP 290

Query: 1098 SPAKGSPIKSETTS---TEKVQAGNSAAKVTSGTPFCKKSKQPADKSWLQWTEKYRPKVP 1268
             P K SP K+E      +  V+   S       +P  K+  Q  +K+ L W EKYRPK+P
Sbjct: 291  LPKK-SPQKTEANKDSVSNSVEMKASRGLTPRASP-AKRKNQTVEKNTLTWAEKYRPKIP 348

Query: 1269 TDLVGNQSLVKQLHDWLKQWDDQFLNTTSKGKGKKQNDSGAKKAVLLSGTPGIGKTTSAK 1448
             ++VGNQSLVKQLHDWL  W +QFL+T +  KGKKQNDSGAKKAVLLSGTPGIGKTTSAK
Sbjct: 349  NEIVGNQSLVKQLHDWLAHWKEQFLDTGTNKKGKKQNDSGAKKAVLLSGTPGIGKTTSAK 408

Query: 1449 IVSQMLGFQAVEVNASDSRGKADAKIQKGIGGSTANSIKELVSNNSLGLTLDRPHQTKTV 1628
            +VSQMLGFQA+EVNASDSRGKADAKI+KGIGGS ANSIKELVSN +L + +DR  Q KTV
Sbjct: 409  LVSQMLGFQAIEVNASDSRGKADAKIEKGIGGSNANSIKELVSNEALSVNMDRSKQPKTV 468

Query: 1629 LIMDEVDGMSGGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCLLLSFRKPTK 1808
            LIMDEVDGMS GDRGG+ADL               NDRYSQKLKSLVNYCLLLSFRKPTK
Sbjct: 469  LIMDEVDGMSAGDRGGIADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTK 528

Query: 1809 QQMAKRLMHVAKAEGVKVNEIALEELASRVNGDMRMALNQLQYMSLSNSEIGYDNIRQRL 1988
            QQMAKRLMHVA AEG++VNEIA+EELA RVNGDMRMALNQLQYMSLS S I YD+IRQRL
Sbjct: 529  QQMAKRLMHVANAEGLQVNEIAVEELAERVNGDMRMALNQLQYMSLSMSVIKYDDIRQRL 588

Query: 1989 QNSSKDEDISPFTAVDKL--FTADKLRMDERIDLSMSDPDLVPLLIQENYINFRPRSLGG 2162
             +S+KDEDISPFTAVDKL  F A KLRMDER+DLSMSDPDLVPLLIQENY+N+RP S+G 
Sbjct: 589  LSSAKDEDISPFTAVDKLFGFNAGKLRMDERMDLSMSDPDLVPLLIQENYMNYRPSSVG- 647

Query: 2163 YNRSKMDNAKQSEEEIRHLNLLSRAADSIADGDIVNVQIRRYQRWQLSQTSVLASCIIPS 2342
                K DN       I+ +NL++RAA+SI DGDI+NVQIRRY++WQLSQ+  LAS IIP+
Sbjct: 648  ----KDDNG------IKRMNLIARAAESIGDGDIINVQIRRYRQWQLSQSGSLASSIIPA 697

Query: 2343 MLLHGQRQTLEQGERNFNRFGGWLGKNSTLGKNYRLLEDLHVHLLASCESYMGRMALRLD 2522
             LLHGQR+TLE GERNFNRFGGWLGKNST+GKN RLLEDLH+HLLAS ES  GR  LR++
Sbjct: 698  ALLHGQRETLELGERNFNRFGGWLGKNSTMGKNRRLLEDLHIHLLASRESSSGRENLRVE 757

Query: 2523 HLTLLKKQLTDPLRQLAKDEAVEKVVEFMXXXXXXXXXXXXXMEISKFQGHPNPLEGVQP 2702
            +LTLL KQLT+PLR L KDEAV+KVVEFM             +E+SKF+GHPNPL+G+QP
Sbjct: 758  YLTLLLKQLTEPLRVLHKDEAVQKVVEFMNIYSITQEDFDTIVELSKFRGHPNPLDGIQP 817

Query: 2703 TVKTALTKAYNKGSKSRVIRTADLITLPGIKKAPKKRIAAMLEPVDEGIAEETDGTLLGN 2882
             VK ALTKAY +GSKSR++R ADL+ LPG++KAPKKRIAAMLEP  +G A+    TL  N
Sbjct: 818  AVKAALTKAYKEGSKSRMVRAADLVMLPGMRKAPKKRIAAMLEPSGDGFADVNADTLAEN 877

Query: 2883 EDENSSETEDLEDSNDAEKLQSDLQSLNRKGIQVDMDLKVSGKASAKKTPASRGK 3047
            E+ENSS+TEDL+ + + EKLQ +LQSLN KG+QV++DLK +G + AKKTP  RGK
Sbjct: 878  EEENSSDTEDLDSTANGEKLQLELQSLNSKGVQVELDLKSTGNSGAKKTPVGRGK 932



 Score = 77.0 bits (188), Expect = 2e-10
 Identities = 51/130 (39%), Positives = 68/130 (52%), Gaps = 6/130 (4%)
 Frame = +3

Query: 129 MSDIRKWFMKQHDKSPGDGKAPKPVVPA-SQPNKSGSAGQEASGRRKTSKYFASDXXXXX 305
           MSDIRKWFMK H K  G+G   KP  PA S        GQE+S RR+TSKYFA+D     
Sbjct: 1   MSDIRKWFMKSHVK--GNGGESKPANPAPSNSETLVHGGQESSVRRRTSKYFATDKQKPE 58

Query: 306 XXXXXXXXXXRKASNVGNEQSV-----KKVHKIEXXXXXXLVLAAPTKTSIGASPNKKLK 470
                     ++ +   + +S+     KK HK+E       VL +  K  +  +P+KKLK
Sbjct: 59  DEEETKELPAKRKTQKDSIESLKPKPSKKAHKVE-DDDDDFVLPSSRKNLVDVTPSKKLK 117

Query: 471 GASGRGITRK 500
              GRGI++K
Sbjct: 118 SGLGRGISQK 127


>XP_012459306.1 PREDICTED: replication factor C subunit 1 [Gossypium raimondii]
          Length = 992

 Score = 1023 bits (2645), Expect = 0.0
 Identities = 534/779 (68%), Positives = 612/779 (78%), Gaps = 3/779 (0%)
 Frame = +3

Query: 738  FMNFGERKDPPHKGEKEIPEGKRDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 917
            FMNFGERKDPPHKGEKE+PEG  DCL GLTFVISGTLDSLEREEAEDLIKR+GGRVTGSV
Sbjct: 215  FMNFGERKDPPHKGEKEVPEGAPDCLTGLTFVISGTLDSLEREEAEDLIKRYGGRVTGSV 274

Query: 918  SKKTSYLLCDEDIEGKKSEKAKELGTTFLTEDALFDMIRKSNKSLTSPK-EEKKALNKVA 1094
            SKKT+YLLCDEDI G+KS KAKELGT FLTED LFDMIR SN      K +  K+   VA
Sbjct: 275  SKKTNYLLCDEDIGGRKSSKAKELGTKFLTEDGLFDMIRASNHGKAPLKGQSNKSAVTVA 334

Query: 1095 PSPAKGSPIKSETTSTEKVQAGNSAAKVTSGTPFCKKSKQPADKSWLQWTEKYRPKVPTD 1274
            PS  K SP ++E  +T       S +         KK  QP   S L WTEKYRPKVP +
Sbjct: 335  PSLPKKSPQQTEVKATLTKSPSPSVSSA-------KKRGQPVQHSSLPWTEKYRPKVPNE 387

Query: 1275 LVGNQSLVKQLHDWLKQWDDQFLNTTSKGKGKKQNDSGAKKAVLLSGTPGIGKTTSAKIV 1454
            + GNQSLVKQLHDWL QW+ QFL T SKGKGKKQNDSGAKKAVLLSGTPGIGKTTSAK+V
Sbjct: 388  ITGNQSLVKQLHDWLTQWNKQFLGTGSKGKGKKQNDSGAKKAVLLSGTPGIGKTTSAKLV 447

Query: 1455 SQMLGFQAVEVNASDSRGKADAKIQKGIGGSTANSIKELVSNNSLGLTLDRPHQTKTVLI 1634
            SQMLGFQ +EVNASDSRGKADA + KGIGGS ANSIKELVSN +LG+ +DR    KTVLI
Sbjct: 448  SQMLGFQTIEVNASDSRGKADANVSKGIGGSNANSIKELVSNEALGVNMDRSKHPKTVLI 507

Query: 1635 MDEVDGMSGGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCLLLSFRKPTKQQ 1814
            MDEVDGMS GDRGG+ADL               NDRYSQKLKSLVNYCLLLS+RKPTKQQ
Sbjct: 508  MDEVDGMSAGDRGGIADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSYRKPTKQQ 567

Query: 1815 MAKRLMHVAKAEGVKVNEIALEELASRVNGDMRMALNQLQYMSLSNSEIGYDNIRQRLQN 1994
            MAKRLM VA AEG++VNEIALEELA RVNGDMRMALNQLQYMSLS S I Y++I+QRL +
Sbjct: 568  MAKRLMQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSVINYNDIKQRLLS 627

Query: 1995 SSKDEDISPFTAVDKL--FTADKLRMDERIDLSMSDPDLVPLLIQENYINFRPRSLGGYN 2168
            SSKDED+SPFTAVDKL  F   KLRMDERIDLSMSDPDLVPLL+QENYIN+RP S+G   
Sbjct: 628  SSKDEDMSPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLVQENYINYRPSSIG--- 684

Query: 2169 RSKMDNAKQSEEEIRHLNLLSRAADSIADGDIVNVQIRRYQRWQLSQTSVLASCIIPSML 2348
                    + +  I+ +N ++RAA+SI DGDI+NVQIRRY++WQLSQTS L+SCIIP+ L
Sbjct: 685  --------KDDSGIKRMNSIARAAESIGDGDIINVQIRRYRQWQLSQTSALSSCIIPAAL 736

Query: 2349 LHGQRQTLEQGERNFNRFGGWLGKNSTLGKNYRLLEDLHVHLLASCESYMGRMALRLDHL 2528
            LHGQR+TLEQGERNFNRFGGWLGKNST+ KNYRLLEDLHVH LAS ES  GR  LRL++L
Sbjct: 737  LHGQRETLEQGERNFNRFGGWLGKNSTMSKNYRLLEDLHVHFLASRESCSGRETLRLEYL 796

Query: 2529 TLLKKQLTDPLRQLAKDEAVEKVVEFMXXXXXXXXXXXXXMEISKFQGHPNPLEGVQPTV 2708
            T+L K+LT+PLR + KDEAV++V+E M             +E+SKFQG PNP+EG+ P V
Sbjct: 797  TILLKRLTNPLRDMPKDEAVKQVLECMNAYSISQEDFDTIVELSKFQGSPNPMEGIPPAV 856

Query: 2709 KTALTKAYNKGSKSRVIRTADLITLPGIKKAPKKRIAAMLEPVDEGIAEETDGTLLGNED 2888
            K ALTKAY +GSK+R+IR ADL+TLPG+KKAPKKRIAA+LEP D+ + EE +G  L   D
Sbjct: 857  KAALTKAYKEGSKTRIIRAADLVTLPGMKKAPKKRIAAILEPSDDVLGEE-NGDELPEND 915

Query: 2889 ENSSETEDLEDSNDAEKLQSDLQSLNRKGIQVDMDLKVSGKASAKKTPASRGKKNAEAA 3065
            EN+S+TEDLE + + EKLQ++LQSLN KGI+V M+LK +G +SAKK P+ R K    AA
Sbjct: 916  ENTSDTEDLEGTTNGEKLQAELQSLNSKGIEVQMELKGTGNSSAKKAPSGRAKGGGRAA 974



 Score = 81.3 bits (199), Expect = 8e-12
 Identities = 53/129 (41%), Positives = 66/129 (51%), Gaps = 5/129 (3%)
 Frame = +3

Query: 129 MSDIRKWFMKQHDKSPG--DGKAPKPVVPASQPNKSGSAGQEASGRRKTSKYF-ASDXXX 299
           MSDIRKWFMK HDK  G  +G A KP   A     S   GQE SGRRKTSKYF A     
Sbjct: 1   MSDIRKWFMKAHDKGKGKGNGTASKPANAAETKTDSVPGGQENSGRRKTSKYFPAEKQKP 60

Query: 300 XXXXXXXXXXXXRKASNVGNEQS--VKKVHKIEXXXXXXLVLAAPTKTSIGASPNKKLKG 473
                       RK  N  +E++   KK  K++      L     +K S+  +P+KKLK 
Sbjct: 61  KDEQENEELPVKRKVQNESSEKAPPSKKPSKVDVDDDFVL---PKSKNSVDVTPSKKLKS 117

Query: 474 ASGRGITRK 500
            SG+G+ +K
Sbjct: 118 GSGKGVAQK 126


>XP_016714165.1 PREDICTED: replication factor C subunit 1 [Gossypium hirsutum]
          Length = 992

 Score = 1022 bits (2643), Expect = 0.0
 Identities = 536/781 (68%), Positives = 615/781 (78%), Gaps = 5/781 (0%)
 Frame = +3

Query: 738  FMNFGERKDPPHKGEKEIPEGKRDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 917
            FMNFGERKDPPHKGEKE+PEG  DCL GLTFVISGTLDSLEREEAEDLIKR+GGRVTGSV
Sbjct: 215  FMNFGERKDPPHKGEKEVPEGAPDCLTGLTFVISGTLDSLEREEAEDLIKRYGGRVTGSV 274

Query: 918  SKKTSYLLCDEDIEGKKSEKAKELGTTFLTEDALFDMIRKSNKSLTSPK-EEKKALNKVA 1094
            SKKT+YLLCDEDI G+KS KAKELGT FLTED LFDMIR SN      K +  K+   VA
Sbjct: 275  SKKTNYLLCDEDIGGRKSSKAKELGTKFLTEDGLFDMIRASNHGKAPLKGQSNKSAVTVA 334

Query: 1095 PSPAKGSPIKSE--TTSTEKVQAGNSAAKVTSGTPFCKKSKQPADKSWLQWTEKYRPKVP 1268
            PS  K SP ++E  TT T+      S+AK         K  QP   S L WTEKYRPKVP
Sbjct: 335  PSLPKKSPQQTEVKTTLTKSPSPSVSSAK---------KRGQPVQHSSLPWTEKYRPKVP 385

Query: 1269 TDLVGNQSLVKQLHDWLKQWDDQFLNTTSKGKGKKQNDSGAKKAVLLSGTPGIGKTTSAK 1448
             ++ GNQSLVKQLHDWL QW+ QFL T SKGKGKKQND+GAKKAVLLSGTPGIGKTTSAK
Sbjct: 386  NEITGNQSLVKQLHDWLTQWNKQFLGTGSKGKGKKQNDAGAKKAVLLSGTPGIGKTTSAK 445

Query: 1449 IVSQMLGFQAVEVNASDSRGKADAKIQKGIGGSTANSIKELVSNNSLGLTLDRPHQTKTV 1628
            +VSQMLGFQ +EVNASDSRGKADA + KGIGGS ANSIKELVSN +LG+ +DR    KTV
Sbjct: 446  LVSQMLGFQTIEVNASDSRGKADANVSKGIGGSNANSIKELVSNEALGVNMDRSKHPKTV 505

Query: 1629 LIMDEVDGMSGGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCLLLSFRKPTK 1808
            LIMDEVDGMS GDRGG+ADL               NDRYSQKLKSLVNYCLLLS+RKPTK
Sbjct: 506  LIMDEVDGMSAGDRGGIADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSYRKPTK 565

Query: 1809 QQMAKRLMHVAKAEGVKVNEIALEELASRVNGDMRMALNQLQYMSLSNSEIGYDNIRQRL 1988
            QQMAKRLM VA AEG++VNEIALEELA RVNGDMRMALNQLQYMSLS S I Y++I+QRL
Sbjct: 566  QQMAKRLMQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSVINYNDIKQRL 625

Query: 1989 QNSSKDEDISPFTAVDKL--FTADKLRMDERIDLSMSDPDLVPLLIQENYINFRPRSLGG 2162
             +SSKDED+SPFTAVDKL  F   KLRMDERIDLSMSDPDLVPLL+QENYIN+RP S+G 
Sbjct: 626  LSSSKDEDMSPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLVQENYINYRPSSIG- 684

Query: 2163 YNRSKMDNAKQSEEEIRHLNLLSRAADSIADGDIVNVQIRRYQRWQLSQTSVLASCIIPS 2342
                      + +  I+ +N ++RAA+SI DGDI+NVQIRRY++WQLSQTS L+SCIIP+
Sbjct: 685  ----------KDDSGIKRMNSIARAAESIGDGDIINVQIRRYRQWQLSQTSALSSCIIPA 734

Query: 2343 MLLHGQRQTLEQGERNFNRFGGWLGKNSTLGKNYRLLEDLHVHLLASCESYMGRMALRLD 2522
             LLHGQR+TLEQGERNFNRFGGWLGKNST+ KNYRLLEDLHVH LAS ES  GR  LRL+
Sbjct: 735  ALLHGQRETLEQGERNFNRFGGWLGKNSTMSKNYRLLEDLHVHFLASRESCSGRETLRLE 794

Query: 2523 HLTLLKKQLTDPLRQLAKDEAVEKVVEFMXXXXXXXXXXXXXMEISKFQGHPNPLEGVQP 2702
            +LT+L K+L +PLR + KDEAV++V+E M             +E+SKFQG+PNP+EG+ P
Sbjct: 795  YLTILLKRLINPLRDMPKDEAVKQVLECMNAYSISQEDFDTIVELSKFQGYPNPMEGIPP 854

Query: 2703 TVKTALTKAYNKGSKSRVIRTADLITLPGIKKAPKKRIAAMLEPVDEGIAEETDGTLLGN 2882
             VK ALTKAY +GSK+R+IR ADL+TLPGIKKAPKKRIAA+LEP D+ + EE +G  L  
Sbjct: 855  AVKAALTKAYKEGSKTRIIRAADLVTLPGIKKAPKKRIAAILEPSDDVLGEE-NGDELPE 913

Query: 2883 EDENSSETEDLEDSNDAEKLQSDLQSLNRKGIQVDMDLKVSGKASAKKTPASRGKKNAEA 3062
             DEN+S+TEDLE + + EKLQ++LQSLN KGI+V M+LK +G +SAKK P+ R K    A
Sbjct: 914  NDENTSDTEDLEGTTNGEKLQAELQSLNSKGIEVQMELKGTGNSSAKKAPSGRAKGGGRA 973

Query: 3063 A 3065
            A
Sbjct: 974  A 974



 Score = 81.3 bits (199), Expect = 8e-12
 Identities = 53/129 (41%), Positives = 66/129 (51%), Gaps = 5/129 (3%)
 Frame = +3

Query: 129 MSDIRKWFMKQHDKSPG--DGKAPKPVVPASQPNKSGSAGQEASGRRKTSKYF-ASDXXX 299
           MSDIRKWFMK HDK  G  +G A KP   A     S   GQE SGRRKTSKYF A     
Sbjct: 1   MSDIRKWFMKAHDKGKGKGNGTASKPANAAETKTDSVPGGQENSGRRKTSKYFPAEKQKP 60

Query: 300 XXXXXXXXXXXXRKASNVGNEQS--VKKVHKIEXXXXXXLVLAAPTKTSIGASPNKKLKG 473
                       RK  N  +E++   KK  K++      L     +K S+  +P+KKLK 
Sbjct: 61  KDEQENEELPVKRKVQNESSEKAPPSKKPSKVDVDDDFVL---PKSKNSVDVTPSKKLKS 117

Query: 474 ASGRGITRK 500
            SG+G+ +K
Sbjct: 118 GSGKGVAQK 126


>XP_011037296.1 PREDICTED: replication factor C subunit 1 [Populus euphratica]
            XP_011037297.1 PREDICTED: replication factor C subunit 1
            [Populus euphratica]
          Length = 966

 Score = 1019 bits (2635), Expect = 0.0
 Identities = 542/782 (69%), Positives = 621/782 (79%), Gaps = 5/782 (0%)
 Frame = +3

Query: 738  FMNFGERKDPPHKGEKEIPEGKRDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 917
            FMNFGERKDPPHKGEKE+PEG  +CLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV
Sbjct: 176  FMNFGERKDPPHKGEKEVPEGAPNCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 235

Query: 918  SKKTSYLLCDEDIEGKKSEKAKELGTTFLTEDALFDMIRKSNKSLTSPKEEKK-ALNKVA 1094
            SKKTSYLLCDEDIEG+KS KAKELGT FLTED LFD IR S  S    +E+ K ++ KVA
Sbjct: 236  SKKTSYLLCDEDIEGRKSSKAKELGTPFLTEDGLFDKIRSSKNSKAPAREDSKVSVEKVA 295

Query: 1095 PSPAKGSPIKSETTSTEKVQAGNSAAK-VTSGTPFCKKSKQPADKSWLQWTEKYRPKVPT 1271
              P K SP K++  S  K    N+A K + +G+   K+  Q    S L WTEKYRPKVP 
Sbjct: 296  SLPKK-SPQKADLKS--KSLMSNAAHKDLGAGSQQAKQKDQAIQCSSLIWTEKYRPKVPN 352

Query: 1272 DLVGNQSLVKQLHDWLKQWDDQFLNTTSKGKGKKQNDSGAKKAVLLSGTPGIGKTTSAKI 1451
            +++GNQSLV QLH+WLK W++QF +T +KGKGKKQNDS AKKAVLLSG PGIGKTTSAK+
Sbjct: 353  EMIGNQSLVTQLHNWLKNWNEQFHDTGNKGKGKKQNDSTAKKAVLLSGPPGIGKTTSAKL 412

Query: 1452 VSQMLGFQAVEVNASDSRGKADAKIQKGIGGSTANSIKELVSNNSLGLTLDRPHQTKTVL 1631
            VS+MLGFQA+EVNASD+RGKADAKI KGI GS AN IKEL+SN SLG  +DR    KTVL
Sbjct: 413  VSKMLGFQAIEVNASDNRGKADAKIFKGISGSNANCIKELISNESLGFEMDRSKHLKTVL 472

Query: 1632 IMDEVDGMSGGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCLLLSFRKPTKQ 1811
            IMDEVDGMS GDRGGVADL               NDRYSQKLKSLVNYCLLLSFRKPTKQ
Sbjct: 473  IMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQ 532

Query: 1812 QMAKRLMHVAKAEGVKVNEIALEELASRVNGDMRMALNQLQYMSLSNSEIGYDNIRQRLQ 1991
            QMAKRL  VA AEG++VNEIALEELA RVNGDMRMALNQLQYMSLS S I YD++RQRLQ
Sbjct: 533  QMAKRLNQVAGAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSVINYDDVRQRLQ 592

Query: 1992 NSSKDEDISPFTAVDKL--FTADKLRMDERIDLSMSDPDLVPLLIQENYINFRPRSLGGY 2165
             S+KDEDISPFTAVDKL  F+  KLRMDERIDLSMSDPDLVPLLIQENYIN+RP S+G  
Sbjct: 593  GSAKDEDISPFTAVDKLFGFSGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPSSIG-- 650

Query: 2166 NRSKMDNAKQSEEEIRHLNLLSRAADSIADGDIVNVQIRRYQRWQLSQTSVLASCIIPSM 2345
               K DN       ++ ++L++RAA+SIADGDI+NVQIRRY++WQLSQT  L+SCIIP+ 
Sbjct: 651  ---KDDNG------MKRMSLIARAAESIADGDIINVQIRRYRQWQLSQTGSLSSCIIPAA 701

Query: 2346 LLHGQRQTLEQGERNFNRFGGWLGKNSTLGKNYRLLEDLHVHLLASCESYMGRMALRLDH 2525
            LLHG R+TLEQGERNFNRFGGWLGKNST GKN RLLEDLHVHLLAS ES MGR  LRLD+
Sbjct: 702  LLHGSRETLEQGERNFNRFGGWLGKNSTAGKNLRLLEDLHVHLLASRESNMGRETLRLDY 761

Query: 2526 LTLLKKQLTDPLRQLAKDEAVEKVVEFMXXXXXXXXXXXXXMEISKFQGHPNPLEGVQPT 2705
            LT+L KQLTDPLR L KDEAVEKVVEFM             +E+SKFQGH NPL+G+  T
Sbjct: 762  LTVLLKQLTDPLRVLPKDEAVEKVVEFMNIYSISQDDMDTIVELSKFQGHGNPLDGIPST 821

Query: 2706 VKTALTKAYNKGSKSRVIRTADLITLPGIKKAPKKRIAAMLEPVDEGIAEETDGTLLGNE 2885
            VK ALT+AY   SKSR++R ADL+TLPG KKAPKKR+AA+LEP D+G+ EE    L  +E
Sbjct: 822  VKAALTRAYKGESKSRMVRAADLVTLPGKKKAPKKRVAAILEPSDDGLREENGDALAESE 881

Query: 2886 DENSSETEDLEDSNDAEKLQSDLQSLNRKGIQVDMDLKVSGKAS-AKKTPASRGKKNAEA 3062
            +ENSS+TED+E + + EKLQS+LQSLN KGIQV+++LK   ++S +KKTP  RGK  + +
Sbjct: 882  EENSSDTEDMEGTGNGEKLQSELQSLNSKGIQVEVELKCGKESSKSKKTPTGRGKGGSAS 941

Query: 3063 AD 3068
             +
Sbjct: 942  TE 943



 Score = 79.3 bits (194), Expect = 3e-11
 Identities = 52/128 (40%), Positives = 67/128 (52%), Gaps = 6/128 (4%)
 Frame = +3

Query: 135 DIRKWFMKQHDKSPGDG-KAPKPVVPASQPNKSGSAGQEASGRRKTSKYFASDXXXXXXX 311
           DIRKWFMK HDK   +  K P P  P ++    G  GQE SGRRKTSKYF ++       
Sbjct: 4   DIRKWFMKAHDKGNDNAEKKPPPTEPKTETPVCG--GQEGSGRRKTSKYFVANKQKQKED 61

Query: 312 XXXXXXXXRKASNVGNEQSV-----KKVHKIEXXXXXXLVLAAPTKTSIGASPNKKLKGA 476
                   ++ +   + QSV     KKVHK +         + P K +  ASP+KKLK +
Sbjct: 62  KEVEDLPVKRKAQNDDFQSVKPPPSKKVHKFDDEEEDDDDFSLPKKKN-AASPSKKLKSS 120

Query: 477 SGRGITRK 500
           SGRGI +K
Sbjct: 121 SGRGIAQK 128


>XP_012066371.1 PREDICTED: replication factor C subunit 1 [Jatropha curcas]
          Length = 975

 Score = 1019 bits (2634), Expect = 0.0
 Identities = 530/778 (68%), Positives = 614/778 (78%), Gaps = 2/778 (0%)
 Frame = +3

Query: 738  FMNFGERKDPPHKGEKEIPEGKRDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 917
            FMNFGERKDPPHKGEKE+PEG  DCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV
Sbjct: 187  FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 246

Query: 918  SKKTSYLLCDEDIEGKKSEKAKELGTTFLTEDALFDMIRKSNKSLTSPKEEKKALNKVAP 1097
            SKKT+YLLCDEDIEG+KS KAKELGT FLTED LF+MIR S     +  E K+++ KVA 
Sbjct: 247  SKKTNYLLCDEDIEGRKSSKAKELGTPFLTEDGLFNMIRSSKAKAPALNEAKESVKKVAS 306

Query: 1098 SPAKGSPIKSETTSTEKVQAGNSAAKVTSGTPFCKKSKQPADKSWLQWTEKYRPKVPTDL 1277
             P K SP K+E       + G S    TSG    K+ ++    S L WTEKYRPK P D+
Sbjct: 307  QPKK-SPEKAEVKCNSITKNG-SRKDSTSGVSPAKQKERTNICSSLPWTEKYRPKAPNDI 364

Query: 1278 VGNQSLVKQLHDWLKQWDDQFLNTTSKGKGKKQNDSGAKKAVLLSGTPGIGKTTSAKIVS 1457
            +GNQSLV QLH WLK WD+QFL T +KGK KKQNDSGAKKAVLLSGTPGIGKTT+AK+VS
Sbjct: 365  IGNQSLVNQLHSWLKNWDEQFLGTGNKGKSKKQNDSGAKKAVLLSGTPGIGKTTAAKLVS 424

Query: 1458 QMLGFQAVEVNASDSRGKADAKIQKGIGGSTANSIKELVSNNSLGLTLDRPHQTKTVLIM 1637
            +MLGFQA+EVNASDSRGKAD KI KGIGGS AN IKELVSN +LG+ +DR    KTVLIM
Sbjct: 425  RMLGFQAIEVNASDSRGKADNKISKGIGGSNANCIKELVSNEALGVNMDRSKHPKTVLIM 484

Query: 1638 DEVDGMSGGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCLLLSFRKPTKQQM 1817
            DEVDGMS GDRGGVADL               NDRYSQKLKSLVNYCLLLSFRKPTKQQM
Sbjct: 485  DEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQM 544

Query: 1818 AKRLMHVAKAEGVKVNEIALEELASRVNGDMRMALNQLQYMSLSNSEIGYDNIRQRLQNS 1997
            AKRLM VA AE ++VNEIALEELA RVNGDMRMALN LQYMSLS S I YD++RQRL +S
Sbjct: 545  AKRLMQVANAERLQVNEIALEELAERVNGDMRMALNHLQYMSLSMSVIKYDDVRQRLLSS 604

Query: 1998 SKDEDISPFTAVDKL--FTADKLRMDERIDLSMSDPDLVPLLIQENYINFRPRSLGGYNR 2171
            +KDEDISPFTAVDKL  F   KLRMDERIDLSMSDPDLVPL+IQENYIN++P S+G    
Sbjct: 605  AKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLIIQENYINYKPSSIG---- 660

Query: 2172 SKMDNAKQSEEEIRHLNLLSRAADSIADGDIVNVQIRRYQRWQLSQTSVLASCIIPSMLL 2351
             K DN       ++ + +++RAA+SIADGDI+NVQIRRYQRWQLSQT  +AS IIP+ LL
Sbjct: 661  -KDDNG------MKRMKMIARAAESIADGDIINVQIRRYQRWQLSQTGSIASSIIPAALL 713

Query: 2352 HGQRQTLEQGERNFNRFGGWLGKNSTLGKNYRLLEDLHVHLLASCESYMGRMALRLDHLT 2531
            HGQR+TLEQGERNFNRFGGWLG+NST+GKN RLLEDLHVHLLAS ES  GR  LRL++LT
Sbjct: 714  HGQRETLEQGERNFNRFGGWLGRNSTMGKNLRLLEDLHVHLLASRESNYGRETLRLEYLT 773

Query: 2532 LLKKQLTDPLRQLAKDEAVEKVVEFMXXXXXXXXXXXXXMEISKFQGHPNPLEGVQPTVK 2711
            LL K+LTDPLR L KDEAVEKVV+FM             +E+SKFQGH NP++G+  TVK
Sbjct: 774  LLLKRLTDPLRVLPKDEAVEKVVDFMNTYSISQEDTDTIVELSKFQGHSNPMDGIPSTVK 833

Query: 2712 TALTKAYNKGSKSRVIRTADLITLPGIKKAPKKRIAAMLEPVDEGIAEETDGTLLGNEDE 2891
             ALT+AY +G+K R++RTADL+ LPG+KK PKKRIAA+LEP D+G+AEE    L  N++E
Sbjct: 834  AALTRAYKEGNKFRMVRTADLVPLPGMKKVPKKRIAAILEPSDDGLAEENGDVLAANDEE 893

Query: 2892 NSSETEDLEDSNDAEKLQSDLQSLNRKGIQVDMDLKVSGKASAKKTPASRGKKNAEAA 3065
            NSS+TE  E++ D E+L+S+L SL  KGI+V+M++K +G ++AKK P  RG+  + +A
Sbjct: 894  NSSDTEGTEEAPDGEQLKSELNSLKSKGIEVEMEIKGAGNSNAKKMPTGRGRGGSSSA 951



 Score = 85.1 bits (209), Expect = 5e-13
 Identities = 52/137 (37%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
 Frame = +3

Query: 135 DIRKWFMKQHDKSPGDGKAP----------KPVVPASQPNKSGSAGQEASGRRKTSKYFA 284
           DIRKW MK HDK  G+   P          KP    S+P +    G+E SGRRKTSKYFA
Sbjct: 4   DIRKWLMKAHDKGNGNAAKPAQLATTKTEKKPPSVESKPERPAQGGEENSGRRKTSKYFA 63

Query: 285 SD-XXXXXXXXXXXXXXXRKASNVGNEQ----SVKKVHKIEXXXXXXLVLAAPTKTSIGA 449
            D                RK  N  NE      +KK+HK++        +    K S+ A
Sbjct: 64  KDKQKPKAEKEVDELPAKRKTQNDANESVKLPPLKKIHKVDDGGDDDDFVLPDKKKSVDA 123

Query: 450 SPNKKLKGASGRGITRK 500
           +P+KKLK  SGRG+ +K
Sbjct: 124 TPSKKLKTVSGRGVAKK 140


>KDP42975.1 hypothetical protein JCGZ_23917 [Jatropha curcas]
          Length = 966

 Score = 1019 bits (2634), Expect = 0.0
 Identities = 530/778 (68%), Positives = 614/778 (78%), Gaps = 2/778 (0%)
 Frame = +3

Query: 738  FMNFGERKDPPHKGEKEIPEGKRDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 917
            FMNFGERKDPPHKGEKE+PEG  DCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV
Sbjct: 178  FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 237

Query: 918  SKKTSYLLCDEDIEGKKSEKAKELGTTFLTEDALFDMIRKSNKSLTSPKEEKKALNKVAP 1097
            SKKT+YLLCDEDIEG+KS KAKELGT FLTED LF+MIR S     +  E K+++ KVA 
Sbjct: 238  SKKTNYLLCDEDIEGRKSSKAKELGTPFLTEDGLFNMIRSSKAKAPALNEAKESVKKVAS 297

Query: 1098 SPAKGSPIKSETTSTEKVQAGNSAAKVTSGTPFCKKSKQPADKSWLQWTEKYRPKVPTDL 1277
             P K SP K+E       + G S    TSG    K+ ++    S L WTEKYRPK P D+
Sbjct: 298  QPKK-SPEKAEVKCNSITKNG-SRKDSTSGVSPAKQKERTNICSSLPWTEKYRPKAPNDI 355

Query: 1278 VGNQSLVKQLHDWLKQWDDQFLNTTSKGKGKKQNDSGAKKAVLLSGTPGIGKTTSAKIVS 1457
            +GNQSLV QLH WLK WD+QFL T +KGK KKQNDSGAKKAVLLSGTPGIGKTT+AK+VS
Sbjct: 356  IGNQSLVNQLHSWLKNWDEQFLGTGNKGKSKKQNDSGAKKAVLLSGTPGIGKTTAAKLVS 415

Query: 1458 QMLGFQAVEVNASDSRGKADAKIQKGIGGSTANSIKELVSNNSLGLTLDRPHQTKTVLIM 1637
            +MLGFQA+EVNASDSRGKAD KI KGIGGS AN IKELVSN +LG+ +DR    KTVLIM
Sbjct: 416  RMLGFQAIEVNASDSRGKADNKISKGIGGSNANCIKELVSNEALGVNMDRSKHPKTVLIM 475

Query: 1638 DEVDGMSGGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCLLLSFRKPTKQQM 1817
            DEVDGMS GDRGGVADL               NDRYSQKLKSLVNYCLLLSFRKPTKQQM
Sbjct: 476  DEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQM 535

Query: 1818 AKRLMHVAKAEGVKVNEIALEELASRVNGDMRMALNQLQYMSLSNSEIGYDNIRQRLQNS 1997
            AKRLM VA AE ++VNEIALEELA RVNGDMRMALN LQYMSLS S I YD++RQRL +S
Sbjct: 536  AKRLMQVANAERLQVNEIALEELAERVNGDMRMALNHLQYMSLSMSVIKYDDVRQRLLSS 595

Query: 1998 SKDEDISPFTAVDKL--FTADKLRMDERIDLSMSDPDLVPLLIQENYINFRPRSLGGYNR 2171
            +KDEDISPFTAVDKL  F   KLRMDERIDLSMSDPDLVPL+IQENYIN++P S+G    
Sbjct: 596  AKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLIIQENYINYKPSSIG---- 651

Query: 2172 SKMDNAKQSEEEIRHLNLLSRAADSIADGDIVNVQIRRYQRWQLSQTSVLASCIIPSMLL 2351
             K DN       ++ + +++RAA+SIADGDI+NVQIRRYQRWQLSQT  +AS IIP+ LL
Sbjct: 652  -KDDNG------MKRMKMIARAAESIADGDIINVQIRRYQRWQLSQTGSIASSIIPAALL 704

Query: 2352 HGQRQTLEQGERNFNRFGGWLGKNSTLGKNYRLLEDLHVHLLASCESYMGRMALRLDHLT 2531
            HGQR+TLEQGERNFNRFGGWLG+NST+GKN RLLEDLHVHLLAS ES  GR  LRL++LT
Sbjct: 705  HGQRETLEQGERNFNRFGGWLGRNSTMGKNLRLLEDLHVHLLASRESNYGRETLRLEYLT 764

Query: 2532 LLKKQLTDPLRQLAKDEAVEKVVEFMXXXXXXXXXXXXXMEISKFQGHPNPLEGVQPTVK 2711
            LL K+LTDPLR L KDEAVEKVV+FM             +E+SKFQGH NP++G+  TVK
Sbjct: 765  LLLKRLTDPLRVLPKDEAVEKVVDFMNTYSISQEDTDTIVELSKFQGHSNPMDGIPSTVK 824

Query: 2712 TALTKAYNKGSKSRVIRTADLITLPGIKKAPKKRIAAMLEPVDEGIAEETDGTLLGNEDE 2891
             ALT+AY +G+K R++RTADL+ LPG+KK PKKRIAA+LEP D+G+AEE    L  N++E
Sbjct: 825  AALTRAYKEGNKFRMVRTADLVPLPGMKKVPKKRIAAILEPSDDGLAEENGDVLAANDEE 884

Query: 2892 NSSETEDLEDSNDAEKLQSDLQSLNRKGIQVDMDLKVSGKASAKKTPASRGKKNAEAA 3065
            NSS+TE  E++ D E+L+S+L SL  KGI+V+M++K +G ++AKK P  RG+  + +A
Sbjct: 885  NSSDTEGTEEAPDGEQLKSELNSLKSKGIEVEMEIKGAGNSNAKKMPTGRGRGGSSSA 942



 Score = 73.2 bits (178), Expect = 2e-09
 Identities = 47/131 (35%), Positives = 61/131 (46%), Gaps = 15/131 (11%)
 Frame = +3

Query: 153 MKQHDKSPGDGKAP----------KPVVPASQPNKSGSAGQEASGRRKTSKYFASD-XXX 299
           MK HDK  G+   P          KP    S+P +    G+E SGRRKTSKYFA D    
Sbjct: 1   MKAHDKGNGNAAKPAQLATTKTEKKPPSVESKPERPAQGGEENSGRRKTSKYFAKDKQKP 60

Query: 300 XXXXXXXXXXXXRKASNVGNEQ----SVKKVHKIEXXXXXXLVLAAPTKTSIGASPNKKL 467
                       RK  N  NE      +KK+HK++        +    K S+ A+P+KKL
Sbjct: 61  KAEKEVDELPAKRKTQNDANESVKLPPLKKIHKVDDGGDDDDFVLPDKKKSVDATPSKKL 120

Query: 468 KGASGRGITRK 500
           K  SGRG+ +K
Sbjct: 121 KTVSGRGVAKK 131


>XP_017615387.1 PREDICTED: replication factor C subunit 1 [Gossypium arboreum]
          Length = 990

 Score = 1018 bits (2632), Expect = 0.0
 Identities = 532/781 (68%), Positives = 615/781 (78%), Gaps = 5/781 (0%)
 Frame = +3

Query: 738  FMNFGERKDPPHKGEKEIPEGKRDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 917
            FMNFGERKDPPHKGEKE+PEG  DCL GLTFVISGTLDSLEREEA+DLIKR+GGRVTGSV
Sbjct: 213  FMNFGERKDPPHKGEKEVPEGAPDCLNGLTFVISGTLDSLEREEADDLIKRYGGRVTGSV 272

Query: 918  SKKTSYLLCDEDIEGKKSEKAKELGTTFLTEDALFDMIRKSNKSLTSPK-EEKKALNKVA 1094
            SKKT+YLLCDEDI G+KS KAKELGT FLTED LFDMIR SN      K +  K+   VA
Sbjct: 273  SKKTNYLLCDEDIGGRKSSKAKELGTKFLTEDGLFDMIRASNHGKAPLKGQSNKSAVTVA 332

Query: 1095 PSPAKGSPIKSE--TTSTEKVQAGNSAAKVTSGTPFCKKSKQPADKSWLQWTEKYRPKVP 1268
            PS  K SP K+E  TT T+      S+AK         K +QP   S L WTEKYRPKVP
Sbjct: 333  PSLPKKSPQKTEVKTTLTKSPSPSVSSAK---------KREQPVQHSSLPWTEKYRPKVP 383

Query: 1269 TDLVGNQSLVKQLHDWLKQWDDQFLNTTSKGKGKKQNDSGAKKAVLLSGTPGIGKTTSAK 1448
             ++ GNQSLVKQLHDWL QW+ QFL T SKGKGKKQND+GAKKAVLLSGTPGIGKTTSAK
Sbjct: 384  NEITGNQSLVKQLHDWLTQWNKQFLGTGSKGKGKKQNDAGAKKAVLLSGTPGIGKTTSAK 443

Query: 1449 IVSQMLGFQAVEVNASDSRGKADAKIQKGIGGSTANSIKELVSNNSLGLTLDRPHQTKTV 1628
            +VSQMLGFQ +EVNASDSRGKADA + KGIGGS ANSIKELVSN +LG+ +DR    KTV
Sbjct: 444  LVSQMLGFQTIEVNASDSRGKADANVSKGIGGSNANSIKELVSNEALGVNMDRSKHPKTV 503

Query: 1629 LIMDEVDGMSGGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCLLLSFRKPTK 1808
            LIMDEVDGMS GDRGG+ADL               NDRYSQKLKSLVNYCLLLS+RKPTK
Sbjct: 504  LIMDEVDGMSAGDRGGIADLIASIRISKIPIICICNDRYSQKLKSLVNYCLLLSYRKPTK 563

Query: 1809 QQMAKRLMHVAKAEGVKVNEIALEELASRVNGDMRMALNQLQYMSLSNSEIGYDNIRQRL 1988
            QQMAKRLM +A AEG++VNEIALEELA RVNGD+RMALNQLQYMSLS S I Y++I+QRL
Sbjct: 564  QQMAKRLMQIANAEGLQVNEIALEELAERVNGDIRMALNQLQYMSLSMSVINYNDIKQRL 623

Query: 1989 QNSSKDEDISPFTAVDKL--FTADKLRMDERIDLSMSDPDLVPLLIQENYINFRPRSLGG 2162
             +SSKDEDISPFTAVDKL  F   KLRMDERIDLSMSDPDLVPLL+QENYIN+RP S+G 
Sbjct: 624  LSSSKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLVQENYINYRPSSIG- 682

Query: 2163 YNRSKMDNAKQSEEEIRHLNLLSRAADSIADGDIVNVQIRRYQRWQLSQTSVLASCIIPS 2342
                      + +  I+ +N ++RAA+SI DGDI+NVQIRRY++WQLSQTS L+SCIIP+
Sbjct: 683  ----------KDDSGIKRMNSIARAAESIGDGDIINVQIRRYRQWQLSQTSALSSCIIPA 732

Query: 2343 MLLHGQRQTLEQGERNFNRFGGWLGKNSTLGKNYRLLEDLHVHLLASCESYMGRMALRLD 2522
             LLHGQR+TLEQGERNFNRFGGWLGKNST+ KNYRLLED HVH LAS ES  GR  LRL+
Sbjct: 733  ALLHGQRETLEQGERNFNRFGGWLGKNSTMSKNYRLLEDFHVHFLASRESCSGRETLRLE 792

Query: 2523 HLTLLKKQLTDPLRQLAKDEAVEKVVEFMXXXXXXXXXXXXXMEISKFQGHPNPLEGVQP 2702
            +L +L K+LT+PLR + KDEAV++V+EFM             +E+SKFQG+PNP+EG+  
Sbjct: 793  YLPILLKRLTNPLRDMPKDEAVKQVLEFMNAYSISQEDFDTIVELSKFQGYPNPMEGIPS 852

Query: 2703 TVKTALTKAYNKGSKSRVIRTADLITLPGIKKAPKKRIAAMLEPVDEGIAEETDGTLLGN 2882
             VK ALTKAY +GSK+R+IR ADL+TLPG+KKAPKKRIAA+LEP D+ + EE +G  L  
Sbjct: 853  AVKAALTKAYKEGSKTRIIRAADLVTLPGMKKAPKKRIAAILEPSDDVLGEE-NGDELPE 911

Query: 2883 EDENSSETEDLEDSNDAEKLQSDLQSLNRKGIQVDMDLKVSGKASAKKTPASRGKKNAEA 3062
             DEN+S++EDLE + + EKLQ++LQSLN KGI+V M+LK +G +SAKK P+ R K    A
Sbjct: 912  NDENTSDSEDLEGTTNGEKLQAELQSLNSKGIEVQMELKGTGNSSAKKAPSGRAKGGGRA 971

Query: 3063 A 3065
            A
Sbjct: 972  A 972



 Score = 82.4 bits (202), Expect = 4e-12
 Identities = 51/127 (40%), Positives = 65/127 (51%), Gaps = 3/127 (2%)
 Frame = +3

Query: 129 MSDIRKWFMKQHDKSPGDGKAPKPVVPASQPNKSGSAGQEASGRRKTSKYF-ASDXXXXX 305
           MSDIRKWFMK HDK  G+G A  P   A     S   GQE SGRRKTSKYF A       
Sbjct: 1   MSDIRKWFMKAHDKGKGNGTASNPADAAETKTDSVPGGQENSGRRKTSKYFPAEKQKPKD 60

Query: 306 XXXXXXXXXXRKASNVGNEQS--VKKVHKIEXXXXXXLVLAAPTKTSIGASPNKKLKGAS 479
                     RK  +  +E++   KK  K++      L     +K S+  +P+KKLK  S
Sbjct: 61  EQENEELPVKRKVQDESSEKAPPSKKPSKVDVDDDFVL---PKSKNSVDVTPSKKLKSGS 117

Query: 480 GRGITRK 500
           G+G+ +K
Sbjct: 118 GKGVAQK 124


>XP_015873623.1 PREDICTED: replication factor C subunit 1 isoform X2 [Ziziphus
            jujuba]
          Length = 1015

 Score = 1017 bits (2630), Expect = 0.0
 Identities = 540/784 (68%), Positives = 617/784 (78%), Gaps = 8/784 (1%)
 Frame = +3

Query: 738  FMNFGERKDPPHKGEKEIPEGKRDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 917
            FMNFGERKDPP+KG+KE+PEG  DCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV
Sbjct: 231  FMNFGERKDPPNKGQKEVPEGASDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 290

Query: 918  SKKTSYLLCDEDIEGKKSEKAKELGTTFLTEDALFDMIRKSNKSLTSPKEEKKALNKVAP 1097
            SKKT+YLLCDEDI G+KS KAKELGTTFLTED LFDMIR SN + T   E KK+++    
Sbjct: 291  SKKTNYLLCDEDIGGRKSSKAKELGTTFLTEDGLFDMIRASNHAKTPALESKKSMDSADV 350

Query: 1098 SPAKGSPIKSETTSTEKVQAGNSAAK------VTSGTPFCKKSKQPADKSWLQWTEKYRP 1259
            S  K SP K ET   +K+ + +S  K      +TSG    K+  +    S L WTEKYRP
Sbjct: 351  SLTKKSPQKVET---KKILSDSSLTKNVAKKGLTSGASPAKQRGKSTQYSALTWTEKYRP 407

Query: 1260 KVPTDLVGNQSLVKQLHDWLKQWDDQFLNTTSKGKGKKQNDSGAKKAVLLSGTPGIGKTT 1439
            KVP DL+GNQSLVKQLHDWL  W  QFL+T SK  GKK NDSGAKKAVLLSGTPGIGKTT
Sbjct: 408  KVPNDLIGNQSLVKQLHDWLVNWHKQFLDTGSKKTGKKANDSGAKKAVLLSGTPGIGKTT 467

Query: 1440 SAKIVSQMLGFQAVEVNASDSRGKADAKIQKGIGGSTANSIKELVSNNSLGLTLDRPHQT 1619
            SAK+V QMLGFQA+EVNASD+RGKADAKI+KGIGGS ANSIKELVSN +L + +DR    
Sbjct: 468  SAKLVCQMLGFQAIEVNASDTRGKADAKIEKGIGGSNANSIKELVSNEALSIDMDRSKHP 527

Query: 1620 KTVLIMDEVDGMSGGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCLLLSFRK 1799
            K+VLIMDEVDGMS GDRGG+ADL               NDRYSQKLKSLVNYCLLLSFRK
Sbjct: 528  KSVLIMDEVDGMSAGDRGGIADLISSIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRK 587

Query: 1800 PTKQQMAKRLMHVAKAEGVKVNEIALEELASRVNGDMRMALNQLQYMSLSNSEIGYDNIR 1979
            PTKQQ+AKRLM VA AEG++ NEIALEELA RVNGDMRMALNQLQYMSLS S I YD++R
Sbjct: 588  PTKQQVAKRLMQVANAEGLQANEIALEELAERVNGDMRMALNQLQYMSLSMSVIKYDDVR 647

Query: 1980 QRLQNSSKDEDISPFTAVDKL--FTADKLRMDERIDLSMSDPDLVPLLIQENYINFRPRS 2153
            QRL  S KDEDISPFTAVDKL  F A KLRMDERIDLSMSDPDLVPLLIQENYIN+RP S
Sbjct: 648  QRLLTSGKDEDISPFTAVDKLFGFNAGKLRMDERIDLSMSDPDLVPLLIQENYINYRPSS 707

Query: 2154 LGGYNRSKMDNAKQSEEEIRHLNLLSRAADSIADGDIVNVQIRRYQRWQLSQTSVLASCI 2333
            +G     K DN       ++ LNL++RAA+SI DGDI NVQIR+Y++WQLSQ+  LASCI
Sbjct: 708  IG-----KDDNG------MKRLNLIARAAESIGDGDIFNVQIRKYRQWQLSQSGSLASCI 756

Query: 2334 IPSMLLHGQRQTLEQGERNFNRFGGWLGKNSTLGKNYRLLEDLHVHLLASCESYMGRMAL 2513
            IP+ LLHGQR+TLEQGERNFNRFG WLGKNS+LGKN RLLEDLHVHLLAS E    R  L
Sbjct: 757  IPAALLHGQRETLEQGERNFNRFGSWLGKNSSLGKNKRLLEDLHVHLLASREYNSERETL 816

Query: 2514 RLDHLTLLKKQLTDPLRQLAKDEAVEKVVEFMXXXXXXXXXXXXXMEISKFQGHPNPLEG 2693
            R+++LTLL K+LT+PLR L KDEAV++VVEFM             +EISKF+G PNP++G
Sbjct: 817  RVEYLTLLLKRLTEPLRVLPKDEAVQEVVEFMNTYSISQEDFDTVVEISKFKGRPNPMDG 876

Query: 2694 VQPTVKTALTKAYNKGSKSRVIRTADLITLPGIKKAPKKRIAAMLEPVDEGIAEETDGTL 2873
            VQ TVK ALT+AY +G+KSR++R AD +TLPGIKKAPKKRIAA+LEP D+ I E  D  +
Sbjct: 877  VQSTVKAALTRAYKEGNKSRMVRAADFVTLPGIKKAPKKRIAAILEPYDDEIGENNDDQV 936

Query: 2874 LGNEDENSSETEDLEDSNDAEKLQSDLQSLNRKGIQVDMDLKVSGKASAKKTPASRGKKN 3053
              +ED++S+E EDLE S   EKLQ +LQSLN KG+QV +DLK SG ++ KKTPASRGK N
Sbjct: 937  AVSEDDSSNE-EDLEGSAVGEKLQQELQSLNSKGVQVQVDLKGSGNSNGKKTPASRGKNN 995

Query: 3054 AEAA 3065
            + A+
Sbjct: 996  SSAS 999



 Score = 78.2 bits (191), Expect = 7e-11
 Identities = 54/144 (37%), Positives = 68/144 (47%), Gaps = 18/144 (12%)
 Frame = +3

Query: 123 LEMSDIRKWFMKQHDKSPGDGKA-PKPVVPA---------------SQPNKSGSAGQEAS 254
           +  SDIRKWFMK HDK  G+G    KP  PA               SQP K   A QE S
Sbjct: 1   MSQSDIRKWFMKSHDKGKGNGSTDSKPAKPAQPPVTRVAEKTSQAKSQPEKPVQASQENS 60

Query: 255 GRRKTSKYFASDXXXXXXXXXXXXXXXRKASNVGNEQSV--KKVHKIEXXXXXXLVLAAP 428
           GRRKTSKYF+ D                +     +++ +  KK+   E       +L   
Sbjct: 61  GRRKTSKYFSKDKPKEEEPVEVPSKRKNQKDLDKSDKPLPGKKIRIAESHSDDDFIL-PN 119

Query: 429 TKTSIGASPNKKLKGASGRGITRK 500
           +K+S  A+P KKLK  SGRGI +K
Sbjct: 120 SKSSDDATPKKKLKSGSGRGIVQK 143


>XP_015873622.1 PREDICTED: replication factor C subunit 1 isoform X1 [Ziziphus
            jujuba]
          Length = 1045

 Score = 1017 bits (2630), Expect = 0.0
 Identities = 540/784 (68%), Positives = 617/784 (78%), Gaps = 8/784 (1%)
 Frame = +3

Query: 738  FMNFGERKDPPHKGEKEIPEGKRDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 917
            FMNFGERKDPP+KG+KE+PEG  DCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV
Sbjct: 261  FMNFGERKDPPNKGQKEVPEGASDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 320

Query: 918  SKKTSYLLCDEDIEGKKSEKAKELGTTFLTEDALFDMIRKSNKSLTSPKEEKKALNKVAP 1097
            SKKT+YLLCDEDI G+KS KAKELGTTFLTED LFDMIR SN + T   E KK+++    
Sbjct: 321  SKKTNYLLCDEDIGGRKSSKAKELGTTFLTEDGLFDMIRASNHAKTPALESKKSMDSADV 380

Query: 1098 SPAKGSPIKSETTSTEKVQAGNSAAK------VTSGTPFCKKSKQPADKSWLQWTEKYRP 1259
            S  K SP K ET   +K+ + +S  K      +TSG    K+  +    S L WTEKYRP
Sbjct: 381  SLTKKSPQKVET---KKILSDSSLTKNVAKKGLTSGASPAKQRGKSTQYSALTWTEKYRP 437

Query: 1260 KVPTDLVGNQSLVKQLHDWLKQWDDQFLNTTSKGKGKKQNDSGAKKAVLLSGTPGIGKTT 1439
            KVP DL+GNQSLVKQLHDWL  W  QFL+T SK  GKK NDSGAKKAVLLSGTPGIGKTT
Sbjct: 438  KVPNDLIGNQSLVKQLHDWLVNWHKQFLDTGSKKTGKKANDSGAKKAVLLSGTPGIGKTT 497

Query: 1440 SAKIVSQMLGFQAVEVNASDSRGKADAKIQKGIGGSTANSIKELVSNNSLGLTLDRPHQT 1619
            SAK+V QMLGFQA+EVNASD+RGKADAKI+KGIGGS ANSIKELVSN +L + +DR    
Sbjct: 498  SAKLVCQMLGFQAIEVNASDTRGKADAKIEKGIGGSNANSIKELVSNEALSIDMDRSKHP 557

Query: 1620 KTVLIMDEVDGMSGGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCLLLSFRK 1799
            K+VLIMDEVDGMS GDRGG+ADL               NDRYSQKLKSLVNYCLLLSFRK
Sbjct: 558  KSVLIMDEVDGMSAGDRGGIADLISSIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRK 617

Query: 1800 PTKQQMAKRLMHVAKAEGVKVNEIALEELASRVNGDMRMALNQLQYMSLSNSEIGYDNIR 1979
            PTKQQ+AKRLM VA AEG++ NEIALEELA RVNGDMRMALNQLQYMSLS S I YD++R
Sbjct: 618  PTKQQVAKRLMQVANAEGLQANEIALEELAERVNGDMRMALNQLQYMSLSMSVIKYDDVR 677

Query: 1980 QRLQNSSKDEDISPFTAVDKL--FTADKLRMDERIDLSMSDPDLVPLLIQENYINFRPRS 2153
            QRL  S KDEDISPFTAVDKL  F A KLRMDERIDLSMSDPDLVPLLIQENYIN+RP S
Sbjct: 678  QRLLTSGKDEDISPFTAVDKLFGFNAGKLRMDERIDLSMSDPDLVPLLIQENYINYRPSS 737

Query: 2154 LGGYNRSKMDNAKQSEEEIRHLNLLSRAADSIADGDIVNVQIRRYQRWQLSQTSVLASCI 2333
            +G     K DN       ++ LNL++RAA+SI DGDI NVQIR+Y++WQLSQ+  LASCI
Sbjct: 738  IG-----KDDNG------MKRLNLIARAAESIGDGDIFNVQIRKYRQWQLSQSGSLASCI 786

Query: 2334 IPSMLLHGQRQTLEQGERNFNRFGGWLGKNSTLGKNYRLLEDLHVHLLASCESYMGRMAL 2513
            IP+ LLHGQR+TLEQGERNFNRFG WLGKNS+LGKN RLLEDLHVHLLAS E    R  L
Sbjct: 787  IPAALLHGQRETLEQGERNFNRFGSWLGKNSSLGKNKRLLEDLHVHLLASREYNSERETL 846

Query: 2514 RLDHLTLLKKQLTDPLRQLAKDEAVEKVVEFMXXXXXXXXXXXXXMEISKFQGHPNPLEG 2693
            R+++LTLL K+LT+PLR L KDEAV++VVEFM             +EISKF+G PNP++G
Sbjct: 847  RVEYLTLLLKRLTEPLRVLPKDEAVQEVVEFMNTYSISQEDFDTVVEISKFKGRPNPMDG 906

Query: 2694 VQPTVKTALTKAYNKGSKSRVIRTADLITLPGIKKAPKKRIAAMLEPVDEGIAEETDGTL 2873
            VQ TVK ALT+AY +G+KSR++R AD +TLPGIKKAPKKRIAA+LEP D+ I E  D  +
Sbjct: 907  VQSTVKAALTRAYKEGNKSRMVRAADFVTLPGIKKAPKKRIAAILEPYDDEIGENNDDQV 966

Query: 2874 LGNEDENSSETEDLEDSNDAEKLQSDLQSLNRKGIQVDMDLKVSGKASAKKTPASRGKKN 3053
              +ED++S+E EDLE S   EKLQ +LQSLN KG+QV +DLK SG ++ KKTPASRGK N
Sbjct: 967  AVSEDDSSNE-EDLEGSAVGEKLQQELQSLNSKGVQVQVDLKGSGNSNGKKTPASRGKNN 1025

Query: 3054 AEAA 3065
            + A+
Sbjct: 1026 SSAS 1029



 Score = 80.9 bits (198), Expect = 1e-11
 Identities = 60/173 (34%), Positives = 78/173 (45%), Gaps = 18/173 (10%)
 Frame = +3

Query: 36  FPKTLLVSCFKSP*AFSEKVANSCQFLIELEMSDIRKWFMKQHDKSPGDGKA-PKPVVPA 212
           FP  +   C   P  FS    ++     ++  SDIRKWFMK HDK  G+G    KP  PA
Sbjct: 4   FPDCVFSECKADPIEFSNFSYSNLNS--KMSQSDIRKWFMKSHDKGKGNGSTDSKPAKPA 61

Query: 213 ---------------SQPNKSGSAGQEASGRRKTSKYFASDXXXXXXXXXXXXXXXRKAS 347
                          SQP K   A QE SGRRKTSKYF+ D                +  
Sbjct: 62  QPPVTRVAEKTSQAKSQPEKPVQASQENSGRRKTSKYFSKDKPKEEEPVEVPSKRKNQKD 121

Query: 348 NVGNEQSV--KKVHKIEXXXXXXLVLAAPTKTSIGASPNKKLKGASGRGITRK 500
              +++ +  KK+   E       +L   +K+S  A+P KKLK  SGRGI +K
Sbjct: 122 LDKSDKPLPGKKIRIAESHSDDDFIL-PNSKSSDDATPKKKLKSGSGRGIVQK 173


>XP_017252680.1 PREDICTED: replication factor C subunit 1 [Daucus carota subsp.
            sativus] XP_017252681.1 PREDICTED: replication factor C
            subunit 1 [Daucus carota subsp. sativus]
          Length = 995

 Score = 1017 bits (2629), Expect = 0.0
 Identities = 535/781 (68%), Positives = 616/781 (78%), Gaps = 8/781 (1%)
 Frame = +3

Query: 738  FMNFGERKDPPHKGEKEIPEGKRDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 917
            FMNFGERKDPPHKGEKE+PEG  +CLA LTFVISGTLDSLEREEAEDLIKRHGGR+TGSV
Sbjct: 210  FMNFGERKDPPHKGEKEVPEGAPNCLANLTFVISGTLDSLEREEAEDLIKRHGGRITGSV 269

Query: 918  SKKTSYLLCDEDIEGKKSEKAKELGTTFLTEDALFDMIRKSNKS-LTSPKEEKKALNKVA 1094
            SKKT+YLLCDEDI G+KS KAKELGT FLTED LFDMIR S  S  T+  E KK++ K  
Sbjct: 270  SKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASKPSPATAQNETKKSIEKTV 329

Query: 1095 PSPAKGSP----IKSETTSTEKVQAGNSAAKVTSGTPFCKKSKQPADKSWLQWTEKYRPK 1262
             S  K SP    I  E      V+   +  +  S +P  KK  Q  +   L WTEKY+PK
Sbjct: 330  ASTPKSSPQQLAISKEQARISPVKNSINKGRGQSASP-AKKKSQSTEHPSLSWTEKYKPK 388

Query: 1263 VPTDLVGNQSLVKQLHDWLKQWDDQFLNTTSKGKGKKQNDSGAKKAVLLSGTPGIGKTTS 1442
            VPTD++GNQSLVKQLH+WL QW++QFLNT  KGKGKK  ++GAKKAVLLSGTPGIGKTTS
Sbjct: 389  VPTDIIGNQSLVKQLHEWLVQWNEQFLNTGHKGKGKKPINAGAKKAVLLSGTPGIGKTTS 448

Query: 1443 AKIVSQMLGFQAVEVNASDSRGKADAKIQKGIGGSTANSIKELVSNNSLGLTLDRPHQTK 1622
            AK+VSQMLG+  VEVNASDSRGKAD KI+KGIGGSTANSIKELVSN +L + +DRP   K
Sbjct: 449  AKLVSQMLGYVTVEVNASDSRGKADGKIEKGIGGSTANSIKELVSNEALSVKMDRPKHQK 508

Query: 1623 TVLIMDEVDGMSGGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCLLLSFRKP 1802
            TVL+MDEVDGMS GDRGGVADL               NDRYSQKLKSLVN+CLLL++RKP
Sbjct: 509  TVLVMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNHCLLLNYRKP 568

Query: 1803 TKQQMAKRLMHVAKAEGVKVNEIALEELASRVNGDMRMALNQLQYMSLSNSEIGYDNIRQ 1982
            TKQQMAKRL  +A AEG+K +EIALEELA RVNGDMRMALNQLQYMSLS S I YD+IRQ
Sbjct: 569  TKQQMAKRLAQIANAEGLKADEIALEELAERVNGDMRMALNQLQYMSLSKSVIKYDDIRQ 628

Query: 1983 RLQNSSKDEDISPFTAVDKL--FTADKLRMDERIDLSMSDPDLVPLLIQENYINFRPRSL 2156
            RL +SSKDEDISPFTAVDKL  F A KL +DER++LSMSDPDLVPL+IQENY+N++P S 
Sbjct: 629  RLLSSSKDEDISPFTAVDKLFGFNAGKLGIDERVNLSMSDPDLVPLIIQENYVNYKPSSA 688

Query: 2157 GGYNRSKMDNAKQSEEEIRHLNLLSRAADSIADGDIVNVQIRRYQRWQLSQTSVLASCII 2336
            G           + +  ++ ++L++RAA+SIADGDI+NVQIRRY++WQLSQ+S L+SCII
Sbjct: 689  G-----------RDDNGLKRMSLIARAAESIADGDIINVQIRRYRQWQLSQSSSLSSCII 737

Query: 2337 PSMLLHGQRQTLEQGERNFNRFGGWLGKNSTLGKNYRLLEDLHVHLLASCESYMGRMALR 2516
            P+ LLHGQR+ LEQGERNFNRFGGWLG+NST+GKNYRLL+DLHVHLLA+ ES +GR  LR
Sbjct: 738  PAALLHGQREILEQGERNFNRFGGWLGRNSTMGKNYRLLDDLHVHLLAARESNLGRTTLR 797

Query: 2517 LDHLTLLKKQLTDPLRQLAKDEAVEKVVEFMXXXXXXXXXXXXXMEISKFQGHPNPLEGV 2696
            LD+LTLL K LTDPLR L KDEAVEKVVEFM             +EISKFQGHPNPLEG+
Sbjct: 798  LDYLTLLLKNLTDPLRMLPKDEAVEKVVEFMDSYSISQEDFDAIVEISKFQGHPNPLEGI 857

Query: 2697 QPTVKTALTKAYNKGSKSRVIRTADLITLPGIKKAPKKRIAAMLEPVDEGIAEETDGTLL 2876
             P VK ALTKAYNKGSKSRVIRTADLITLPG+KKAPKKRIAAMLEP D+G+  + D    
Sbjct: 858  LPAVKAALTKAYNKGSKSRVIRTADLITLPGLKKAPKKRIAAMLEPADDGLEGKADEA-- 915

Query: 2877 GNEDENSSETEDLEDSNDAEK-LQSDLQSLNRKGIQVDMDLKVSGKASAKKTPASRGKKN 3053
             NE+ NSS+ E+L+D ND  K +Q DLQ+L+ KGIQV MDLK + K S KKT + RGK+ 
Sbjct: 916  ENEEGNSSD-EELDDKNDGGKAVQLDLQNLSSKGIQVQMDLKGAEKTSGKKTGSGRGKRG 974

Query: 3054 A 3056
            A
Sbjct: 975  A 975


>XP_012855762.1 PREDICTED: replication factor C subunit 1 [Erythranthe guttata]
            EYU22111.1 hypothetical protein MIMGU_mgv1a000730mg
            [Erythranthe guttata]
          Length = 1000

 Score = 1015 bits (2624), Expect = 0.0
 Identities = 531/778 (68%), Positives = 614/778 (78%), Gaps = 2/778 (0%)
 Frame = +3

Query: 738  FMNFGERKDPPHKGEKEIPEGKRDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 917
            FMNFGERKDPPHKGEKE+PEG  +CL GLTFVISGTLDSLEREEAEDLIKRHGGRVTGS+
Sbjct: 220  FMNFGERKDPPHKGEKEVPEGAANCLDGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSI 279

Query: 918  SKKTSYLLCDEDIEGKKSEKAKELGTTFLTEDALFDMIRKSNKSLTSPKEEKKALNKVAP 1097
            SKKT+YLLCDEDI G+KSEKAKELGT FLTED LFD+IR SNKS  + +   K ++KVA 
Sbjct: 280  SKKTNYLLCDEDIGGRKSEKAKELGTAFLTEDGLFDIIRSSNKSKPAAQVPNKRVDKVAT 339

Query: 1098 SPAKGSPIKSETTSTEKVQAGNSAAKVTSGTPFCKKSKQPADKSWLQWTEKYRPKVPTDL 1277
               K SP KSE T     QAG+      S     K+  QPA ++ L WTEKYRPKVP D+
Sbjct: 340  PAPKKSPQKSEKTK----QAGSDTKGPVSVAASPKRKNQPAAQTSLPWTEKYRPKVPNDI 395

Query: 1278 VGNQSLVKQLHDWLKQWDDQFLNTTSKGKGKKQNDSGAKKAVLLSGTPGIGKTTSAKIVS 1457
            VGNQSLVKQLHDWL  W++QFLNT  K KGKKQ+DSG KKAVLLSGTPGIGKTTSAK++S
Sbjct: 396  VGNQSLVKQLHDWLVSWNEQFLNTGKKEKGKKQSDSGPKKAVLLSGTPGIGKTTSAKLIS 455

Query: 1458 QMLGFQAVEVNASDSRGKADAKIQKGIGGSTANSIKELVSNNSLGLTLDRPHQTKTVLIM 1637
            QMLGFQA+EVNASDSRGKADAKIQKGIGGST+NS+KELVSN SL   ++R  Q KTVLIM
Sbjct: 456  QMLGFQAIEVNASDSRGKADAKIQKGIGGSTSNSVKELVSNESLSHKMERTQQQKTVLIM 515

Query: 1638 DEVDGMSGGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCLLLSFRKPTKQQM 1817
            DEVDGMS GDRGGVADL               NDRYSQKLKSL+NYCLLLSFRKPTKQQM
Sbjct: 516  DEVDGMSAGDRGGVADLIASIKISKVPIICICNDRYSQKLKSLMNYCLLLSFRKPTKQQM 575

Query: 1818 AKRLMHVAKAEGVKVNEIALEELASRVNGDMRMALNQLQYMSLSNSEIGYDNIRQRLQNS 1997
            AKRL H+AKAEG++VNEIALEELA R NGD+RMA+NQLQYMSLS S I +D+I+QRLQ+S
Sbjct: 576  AKRLSHIAKAEGIQVNEIALEELAERSNGDIRMAINQLQYMSLSMSVIKFDDIKQRLQSS 635

Query: 1998 SKDEDISPFTAVDKL--FTADKLRMDERIDLSMSDPDLVPLLIQENYINFRPRSLGGYNR 2171
            SKDEDISPFTAVDKL  F A KLRMDERIDLSMSDPDLVPLLIQENYIN+RP S G    
Sbjct: 636  SKDEDISPFTAVDKLFGFNAGKLRMDERIDLSMSDPDLVPLLIQENYINYRPSSAG---- 691

Query: 2172 SKMDNAKQSEEEIRHLNLLSRAADSIADGDIVNVQIRRYQRWQLSQTSVLASCIIPSMLL 2351
             K DN       ++ ++L++RAA+SI DGDI+NVQIRRY++WQLSQ   L SCIIP+ LL
Sbjct: 692  -KDDNG------MKRMSLIARAAESIGDGDIINVQIRRYRQWQLSQFGSLTSCIIPAALL 744

Query: 2352 HGQRQTLEQGERNFNRFGGWLGKNSTLGKNYRLLEDLHVHLLASCESYMGRMALRLDHLT 2531
            HG R+ LEQGERNFNRFGGWLGKNST+GKNYRLLEDLHVHLL S ES +GR  +RLD LT
Sbjct: 745  HGSREILEQGERNFNRFGGWLGKNSTMGKNYRLLEDLHVHLLTSRESDLGRATIRLDCLT 804

Query: 2532 LLKKQLTDPLRQLAKDEAVEKVVEFMXXXXXXXXXXXXXMEISKFQGHPNPLEGVQPTVK 2711
            LL K+LTDPLR L KDEAVE VV+FM             +E+SKF+GHPNPL+G+QP VK
Sbjct: 805  LLLKRLTDPLRVLPKDEAVETVVKFMDSYSISMEDYDTIVEMSKFKGHPNPLDGIQPAVK 864

Query: 2712 TALTKAYNKGSKSRVIRTADLITLPGIKKAPKKRIAAMLEPVDEGIAEETDGTLLGNEDE 2891
             ALT+AYNKGS  RV+R ADL+T+   KKAPKKRIAAMLEP++  +AEE +    G   +
Sbjct: 865  AALTRAYNKGSSLRVVRAADLVTISNFKKAPKKRIAAMLEPLEGSLAEENEE---GTPSD 921

Query: 2892 NSSETEDLEDSNDAEKLQSDLQSLNRKGIQVDMDLKVSGKASAKKTPASRGKKNAEAA 3065
            + ++ +DL+D    + ++S+L+SLN K I+V+++LK SG + AKK PA RGK +A  A
Sbjct: 922  DENQDDDLDDLK-KKSVESNLESLNSKAIKVELELKGSGSSGAKKAPAGRGKGSAATA 978



 Score = 82.8 bits (203), Expect = 3e-12
 Identities = 51/130 (39%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
 Frame = +3

Query: 135 DIRKWFMKQHDKSPGDGKA---PKPVVPASQPNKSGSAGQEASGRRKTSKYFASDXXXXX 305
           DIRKWFMK+H+K  G+G A    KP  P  +P K     QE SGRRKTSKYFA D     
Sbjct: 4   DIRKWFMKKHEKDSGNGSASNQAKPSTPEKRPGKMVEEVQELSGRRKTSKYFAKDGQGVK 63

Query: 306 XXXXXXXXXXRK-----ASNVGNEQSVKKVHKIEXXXXXXLVLAAPTKTSIGASPNKKLK 470
                     +K      SNV    + K+  K+E             K+S+  +PNKKLK
Sbjct: 64  DEMDVEEAPAKKTAKELVSNV-KPPTGKRTLKLENDDDDDDFAPTSRKSSVSITPNKKLK 122

Query: 471 GASGRGITRK 500
             SG+G+ +K
Sbjct: 123 SGSGKGVAQK 132


>XP_018826530.1 PREDICTED: replication factor C subunit 1-like [Juglans regia]
            XP_018826531.1 PREDICTED: replication factor C subunit
            1-like [Juglans regia]
          Length = 960

 Score = 1014 bits (2622), Expect = 0.0
 Identities = 527/775 (68%), Positives = 611/775 (78%), Gaps = 5/775 (0%)
 Frame = +3

Query: 738  FMNFGERKDPPHKGEKEIPEGKRDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 917
            FMNFGERKDPPHKGEKE+PEG  +CLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV
Sbjct: 175  FMNFGERKDPPHKGEKEVPEGAPNCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 234

Query: 918  SKKTSYLLCDEDIEGKKSEKAKELGTTFLTEDALFDMIRKSNKSLTSPKEE-KKALNKVA 1094
            SKKT+YLLCDEDI G+KS KAKELGT  L ED LFDMIR S  +    +EE K+ + K A
Sbjct: 235  SKKTNYLLCDEDIGGRKSAKAKELGTAMLIEDGLFDMIRASKPAKAPAQEEPKRPVYKAA 294

Query: 1095 PSPAKGSPIKSETTSTEKVQAGNSAAK--VTSGTPFCKKSKQPADKSWLQWTEKYRPKVP 1268
            P P K SP K+E        +    A   +T G    K+  Q  +K+ L W EKYRPK+P
Sbjct: 295  PVPRK-SPQKTEANKDSVSNSVEMKASRGLTPGASPAKRKNQSVEKNTLTWAEKYRPKIP 353

Query: 1269 TDLVGNQSLVKQLHDWLKQWDDQFLNTTSKGKGKKQNDSGAKKAVLLSGTPGIGKTTSAK 1448
             ++VGNQSLVKQLHDWL+ W +QFL+T +  KGKKQNDSG KKAVLLSGTPGIGKTTSAK
Sbjct: 354  NEIVGNQSLVKQLHDWLEHWKEQFLDTGTNKKGKKQNDSGTKKAVLLSGTPGIGKTTSAK 413

Query: 1449 IVSQMLGFQAVEVNASDSRGKADAKIQKGIGGSTANSIKELVSNNSLGLTLDRPHQTKTV 1628
            +VSQML FQA+EVNASDSRGKADAKI+KGIGGS ANSIKELVSN +L + +DR    KTV
Sbjct: 414  LVSQMLSFQAIEVNASDSRGKADAKIEKGIGGSNANSIKELVSNEALSVNMDRSKHPKTV 473

Query: 1629 LIMDEVDGMSGGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCLLLSFRKPTK 1808
            LIMDEVDGMS GDRGG+ADL               NDRYSQKLKSLVNYCLLLSFRKPTK
Sbjct: 474  LIMDEVDGMSAGDRGGIADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTK 533

Query: 1809 QQMAKRLMHVAKAEGVKVNEIALEELASRVNGDMRMALNQLQYMSLSNSEIGYDNIRQRL 1988
            QQMAKRLM +A AEG++VNE+A+EELA RVNGDMRMALNQLQYMSLS S I YD+IRQRL
Sbjct: 534  QQMAKRLMQIANAEGLQVNEVAVEELAERVNGDMRMALNQLQYMSLSMSVIKYDDIRQRL 593

Query: 1989 QNSSKDEDISPFTAVDKL--FTADKLRMDERIDLSMSDPDLVPLLIQENYINFRPRSLGG 2162
             +S+KDEDISPFTAVDKL  F A KLRMDE++DLSMSDPDLVPLLIQENYIN+RP S+G 
Sbjct: 594  LSSAKDEDISPFTAVDKLFGFNAGKLRMDEQMDLSMSDPDLVPLLIQENYINYRPSSVG- 652

Query: 2163 YNRSKMDNAKQSEEEIRHLNLLSRAADSIADGDIVNVQIRRYQRWQLSQTSVLASCIIPS 2342
                      +   EI+ +NL++RAA+SI DGDI+NVQIRRY++WQLSQ+  LAS IIP+
Sbjct: 653  ----------KDGNEIKRMNLIARAAESIGDGDIINVQIRRYRQWQLSQSGSLASSIIPA 702

Query: 2343 MLLHGQRQTLEQGERNFNRFGGWLGKNSTLGKNYRLLEDLHVHLLASCESYMGRMALRLD 2522
             LLHG R+ LE GERNFNRFGGWLGKNST+GKN RLLEDLH+HLLAS ES  GR  LR++
Sbjct: 703  ALLHGPREILELGERNFNRFGGWLGKNSTMGKNRRLLEDLHIHLLASRESSSGRENLRVE 762

Query: 2523 HLTLLKKQLTDPLRQLAKDEAVEKVVEFMXXXXXXXXXXXXXMEISKFQGHPNPLEGVQP 2702
            + TLL KQLT+PLR L KDEAV+KVVEFM             +E+SKF+GHPNPL+G+QP
Sbjct: 763  YFTLLLKQLTEPLRVLHKDEAVQKVVEFMNIYSITQEDFDTIVELSKFRGHPNPLDGIQP 822

Query: 2703 TVKTALTKAYNKGSKSRVIRTADLITLPGIKKAPKKRIAAMLEPVDEGIAEETDGTLLGN 2882
             VK ALTKAY +GSKSR++R ADL+ LPG++KAPKKRIAAMLEP D+G ++    TL  N
Sbjct: 823  AVKAALTKAYKEGSKSRMVRAADLVMLPGMRKAPKKRIAAMLEPSDDGFSDANVDTLAEN 882

Query: 2883 EDENSSETEDLEDSNDAEKLQSDLQSLNRKGIQVDMDLKVSGKASAKKTPASRGK 3047
            E+ENSS+TEDL+ + + EKLQ +LQSLN KG+QV++DLK +G + AKKTP  R K
Sbjct: 883  EEENSSDTEDLDSTANGEKLQLELQSLNSKGVQVELDLKGTGNSGAKKTPVGRRK 937



 Score = 84.0 bits (206), Expect = 1e-12
 Identities = 51/130 (39%), Positives = 70/130 (53%), Gaps = 6/130 (4%)
 Frame = +3

Query: 129 MSDIRKWFMKQHDKSPGDGKAPKPVVPA-SQPNKSGSAGQEASGRRKTSKYFASDXXXXX 305
           MSDIRKWFMK H K  G+G   KP  PA S        GQE+SGRR+TSKYFA+D     
Sbjct: 1   MSDIRKWFMKSHVK--GNGGESKPANPAPSNLETLVHGGQESSGRRRTSKYFATDKQKPE 58

Query: 306 XXXXXXXXXXRKASNVGNEQSVK-----KVHKIEXXXXXXLVLAAPTKTSIGASPNKKLK 470
                     ++ +   + +S+K     K HK++       +L +  K  + A+P+KKLK
Sbjct: 59  DEEETKELPAKRKTQKDSIESLKPTPSKKAHKVDNDNDDDFILPSSRKNLVDATPSKKLK 118

Query: 471 GASGRGITRK 500
              GRGI++K
Sbjct: 119 SGLGRGISQK 128