BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00008491
         (1161 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_008666385.1 PREDICTED: uncharacterized protein LOC103645032 [...   124   4e-27
JAU32948.1 Retrovirus-related Pol polyprotein from transposon TN...   113   5e-27
XP_008664109.1 PREDICTED: uncharacterized protein LOC103642667, ...   123   5e-27
AAU10819.1 putative polyprotein [Oryza sativa Japonica Group] AA...   121   4e-26
CAN61640.1 hypothetical protein VITISV_021909 [Vitis vinifera]        120   5e-26
XP_008675247.1 PREDICTED: uncharacterized protein LOC103651388 i...   120   5e-26
XP_008671960.1 PREDICTED: uncharacterized protein LOC103649473 [...   120   7e-26
AAL78658.1 Hopscotch polyprotein, partial [Fagus sylvatica]           112   1e-25
JAU84243.1 Retrovirus-related Pol polyprotein from transposon TN...   112   3e-25
OIW15217.1 hypothetical protein TanjilG_08809 [Lupinus angustifo...   111   4e-25
CAA19715.1 putative protein [Arabidopsis thaliana] CAB79576.1 pu...   118   4e-25
ABA97658.1 retrotransposon protein, putative, Ty1-copia subclass...   117   6e-25
OMO78631.1 Integrase, catalytic core [Corchorus capsularis]           115   1e-24
OMO89784.1 Integrase, catalytic core [Corchorus capsularis]           115   2e-24
EOY32308.1 Uncharacterized protein TCM_040047 [Theobroma cacao]       115   2e-24
OMO61427.1 Zinc finger, CCCH-type [Corchorus capsularis]              114   3e-24
XP_008646585.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized p...   115   3e-24
AAC67200.1 putative retroelement pol polyprotein [Arabidopsis th...   115   3e-24
JAU04955.1 Copia protein, partial [Noccaea caerulescens]              115   4e-24
ABF95666.1 retrotransposon protein, putative, Ty1-copia subclass...   115   4e-24

>XP_008666385.1 PREDICTED: uncharacterized protein LOC103645032 [Zea mays]
          Length = 1155

 Score =  124 bits (310), Expect = 4e-27
 Identities = 63/146 (43%), Positives = 88/146 (60%)
 Frame = +3

Query: 30   GIH*ILLPNNSSAKRGK*AQKNRQMTQKICCLLFQARMPFDFWVEALQYAIKLINILPTP 209
            G+H  +    +S + GK  +  R +   +  LLFQA +P  +W EAL    +L+NILPT 
Sbjct: 753  GVHLRMSCPYTSPQNGKAERIIRTINDVVRSLLFQASIPPSYWAEALNTTTRLLNILPTK 812

Query: 210  LLNHIFPHEALFGTGPVYTSLRVFGSLCYPNLVRHTTIKSLPLSLPCIYPGPSINHKGFR 389
             L    PH+ALFGT PVY  LRVFG  CYPNL+  +  K  P S+ C++ G S +HKG+R
Sbjct: 813  TLRFSTPHQALFGTAPVYNHLRVFGCKCYPNLLATSPHKLAPRSVLCVFLGYSDHHKGYR 872

Query: 390  CLNPENQRVYISRHVRFSELVFSYVD 467
            CL+  + ++ ISRHV F E  F + +
Sbjct: 873  CLDIHSNKIIISRHVVFDETSFPFAE 898


>JAU32948.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Noccaea caerulescens]
          Length = 129

 Score =  113 bits (283), Expect = 5e-27
 Identities = 55/120 (45%), Positives = 76/120 (63%)
 Frame = +3

Query: 87  QKNRQMTQKICCLLFQARMPFDFWVEALQYAIKLINILPTPLLNHIFPHEALFGTGPVYT 266
           +++R + +    LL  A MP +FW  A   A+ LIN +PT  L+   PH  LFGT P Y+
Sbjct: 8   RRHRHIVETGLALLSHASMPIEFWTYAFATAVYLINRMPTATLDMHSPHLKLFGTMPNYS 67

Query: 267 SLRVFGSLCYPNLVRHTTIKSLPLSLPCIYPGPSINHKGFRCLNPENQRVYISRHVRFSE 446
            LR+FG LCYP L  + + K  P SLPC++ G S++   F CL+PE+ R+Y+SRHVRF E
Sbjct: 68  KLRIFGCLCYPWLRPYASHKLDPRSLPCVFLGYSLSQSAFYCLDPESSRIYVSRHVRFCE 127


>XP_008664109.1 PREDICTED: uncharacterized protein LOC103642667, partial [Zea mays]
          Length = 945

 Score =  123 bits (309), Expect = 5e-27
 Identities = 63/146 (43%), Positives = 88/146 (60%)
 Frame = +3

Query: 30   GIH*ILLPNNSSAKRGK*AQKNRQMTQKICCLLFQARMPFDFWVEALQYAIKLINILPTP 209
            G+H  +    +S + GK  +  R +   +  LLFQA +P  +W EAL    +L+NILPT 
Sbjct: 762  GVHLRMSCPYTSPQNGKAERIIRTINDVVRSLLFQASIPPSYWAEALNTTTRLLNILPTK 821

Query: 210  LLNHIFPHEALFGTGPVYTSLRVFGSLCYPNLVRHTTIKSLPLSLPCIYPGPSINHKGFR 389
             L    PH+ALFGT PVY  LRVFG  CYPNL+  +  K  P S+ C++ G S +HKG+R
Sbjct: 822  TLRFSTPHQALFGTAPVYDHLRVFGCKCYPNLLATSPHKLAPRSVLCVFLGYSDHHKGYR 881

Query: 390  CLNPENQRVYISRHVRFSELVFSYVD 467
            CL+  + ++ ISRHV F E  F + +
Sbjct: 882  CLDIHSNKIIISRHVVFDETSFPFAE 907


>AAU10819.1 putative polyprotein [Oryza sativa Japonica Group] AAV24907.1
            hypothetical protein [Oryza sativa Japonica Group]
          Length = 1679

 Score =  121 bits (303), Expect = 4e-26
 Identities = 65/153 (42%), Positives = 89/153 (58%)
 Frame = +3

Query: 30   GIH*ILLPNNSSAKRGK*AQKNRQMTQKICCLLFQARMPFDFWVEALQYAIKLINILPTP 209
            G+H  +   ++S + GK  +  R +   +  +LFQA++P  FWVEAL  A  LIN  PT 
Sbjct: 838  GVHLRMSCPHTSPQNGKAERILRSLNNIVRSMLFQAKLPGSFWVEALHTATHLINRHPTK 897

Query: 210  LLNHIFPHEALFGTGPVYTSLRVFGSLCYPNLVRHTTIKSLPLSLPCIYPGPSINHKGFR 389
             L+   PH AL+GT P Y+ LRVFG  CYPNL   T  K  P S  C++ G  + HKG+R
Sbjct: 898  TLDRHTPHFALYGTHPSYSHLRVFGCKCYPNLSATTPHKLAPRSTMCVFLGYPLYHKGYR 957

Query: 390  CLNPENQRVYISRHVRFSELVFSYVDFYKHLSS 488
            C +P + RV ISRHV F E  F + +    +S+
Sbjct: 958  CFDPLSNRVIISRHVVFDEHSFPFTELTNGVSN 990



 Score = 48.9 bits (115), Expect(2) = 2e-10
 Identities = 20/34 (58%), Positives = 26/34 (76%)
 Frame = +2

Query: 1058 KLHPDGTIDHYKARLVSQGFK*LPGIDYDQTFSP 1159
            K H DG++D YKAR V +GF   PG+D+D+TFSP
Sbjct: 1225 KFHADGSLDRYKARWVLRGFTQRPGVDFDETFSP 1258



 Score = 46.2 bits (108), Expect(2) = 2e-10
 Identities = 29/68 (42%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +3

Query: 813  HHMITRGKAGIVKPRQXXXXXXXXXXPSSPYH-VPTSYTEALKYPHWKLAMIEEYNALLH 989
            H M TR K+G  KP             ++P   VP +Y  AL  P W+ AM EEYNALL 
Sbjct: 1147 HVMTTRAKSGHHKPVHRLNLH------AAPLSLVPKTYRAALADPLWRAAMEEEYNALLA 1200

Query: 990  NQTWPCSP 1013
            N+TW   P
Sbjct: 1201 NRTWDLVP 1208


>CAN61640.1 hypothetical protein VITISV_021909 [Vitis vinifera]
          Length = 1361

 Score =  120 bits (302), Expect = 5e-26
 Identities = 74/198 (37%), Positives = 100/198 (50%), Gaps = 11/198 (5%)
 Frame = +3

Query: 3    KLQPHFSILGIH*ILLPNNSSAKRGK*AQKNRQMTQKICCLLFQARMPFDFWVEALQYAI 182
            K + H    GI   L    + ++ G   +K+R +T+    L+F AR+P   W EA   A+
Sbjct: 554  KFRSHLHSCGIDLRLACPYTPSQNGIVERKHRYVTEIGLTLMFHARVPLSLWDEAFSTAV 613

Query: 183  KLINILPTPLLNHIFPHEALFGTGPVYTSLRVFGSLCYPNLVRHTTIKSLPLSLPCIYPG 362
             LIN LP P L    P+E LFG  P Y+ LR FG LC+P L  ++  K  P S PC++ G
Sbjct: 614  FLINRLPPPSLAGKTPYELLFGKQPDYSMLRTFGCLCFPYLRDYSPNKLSPKSTPCVFLG 673

Query: 363  PSINHKGFRCLNPENQRVYISRHVRFSELVFSY-----------VDFYKHLSSVPSSLFP 509
             S  HKGFRCL+ +  RVY+SRHV+F E  F Y           +D+     S       
Sbjct: 674  YSTLHKGFRCLDRKTHRVYVSRHVQFYEHTFPYNGDSVQNLPSNIDYIHFSESQECVSSS 733

Query: 510  QNCDINNLLPSTSFMTLL 563
             N   ++ LPS SF   L
Sbjct: 734  SNVSTSDSLPSPSFSNSL 751



 Score = 47.8 bits (112), Expect(2) = 8e-10
 Identities = 21/37 (56%), Positives = 28/37 (75%)
 Frame = +2

Query: 1049 F*VKLHPDGTIDHYKARLVSQGFK*LPGIDYDQTFSP 1159
            F  KLH DG+I+ +KARLV+QGF  + G+D+  TFSP
Sbjct: 887  FKTKLHSDGSIERHKARLVAQGFSQVHGLDFGDTFSP 923



 Score = 45.1 bits (105), Expect(2) = 8e-10
 Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
 Frame = +3

Query: 813  HHMITRGKAGIVKPRQXXXXXXXXXXPSSPYHV----PTSYTEALKYPHWKLAMIEEYNA 980
            H MITRGKAGI KPR                 +    P  +  A K+P W  AM +E +A
Sbjct: 803  HPMITRGKAGIFKPRLYHAMHISSSSQLFQAFLALKEPRGFKSAAKHPEWLSAMDDEIHA 862

Query: 981  LLHNQTWPCSP 1013
            L  N TW   P
Sbjct: 863  LKKNDTWVLVP 873


>XP_008675247.1 PREDICTED: uncharacterized protein LOC103651388 isoform X1 [Zea mays]
          Length = 1371

 Score =  120 bits (302), Expect = 5e-26
 Identities = 64/136 (47%), Positives = 78/136 (57%)
 Frame = +3

Query: 60   SSAKRGK*AQKNRQMTQKICCLLFQARMPFDFWVEALQYAIKLINILPTPLLNHIFPHEA 239
            +S + GK  +  R     I  LLFQA MP  +W EAL  A  L+NILPT  L+   PH A
Sbjct: 752  TSPQNGKAGRIIRTTNDVIRSLLFQASMPPSYWAEALHTATLLLNILPTKTLDFSTPHSA 811

Query: 240  LFGTGPVYTSLRVFGSLCYPNLVRHTTIKSLPLSLPCIYPGPSINHKGFRCLNPENQRVY 419
            L G+ P Y  LRVFG  CYPNL      K  P S  CI+ G S +HKG+RCL+P   R+ 
Sbjct: 812  LLGSAPSYDHLRVFGCKCYPNLSTTAPHKLAPRSALCIFIGYSAHHKGYRCLDPTTNRII 871

Query: 420  ISRHVRFSELVFSYVD 467
            ISRHV F E  F + +
Sbjct: 872  ISRHVIFDESTFPFAE 887



 Score = 47.0 bits (110), Expect(2) = 8e-09
 Identities = 27/67 (40%), Positives = 34/67 (50%)
 Frame = +3

Query: 813  HHMITRGKAGIVKPRQXXXXXXXXXXPSSPYHVPTSYTEALKYPHWKLAMIEEYNALLHN 992
            H M+TR K G   P            P SP  VP ++  AL  P+W+ AM EE+ ALL N
Sbjct: 1050 HRMVTRAKDGFRVP------VLYHAVPLSP--VPKTFRSALADPNWRAAMEEEHTALLQN 1101

Query: 993  QTWPCSP 1013
            +TW   P
Sbjct: 1102 KTWDLVP 1108



 Score = 42.4 bits (98), Expect(2) = 8e-09
 Identities = 18/34 (52%), Positives = 24/34 (70%)
 Frame = +2

Query: 1058 KLHPDGTIDHYKARLVSQGFK*LPGIDYDQTFSP 1159
            K H DG+++ YKAR V +GF   P ID+ +TFSP
Sbjct: 1125 KFHADGSLERYKARWVLRGFTQRPAIDFAETFSP 1158


>XP_008671960.1 PREDICTED: uncharacterized protein LOC103649473 [Zea mays]
          Length = 1477

 Score =  120 bits (301), Expect = 7e-26
 Identities = 68/168 (40%), Positives = 90/168 (53%)
 Frame = +3

Query: 30   GIH*ILLPNNSSAKRGK*AQKNRQMTQKICCLLFQARMPFDFWVEALQYAIKLINILPTP 209
            G+H  +    +S + G+  +  R +   +  LLFQA +P  +WVEAL  A  L+N+ PT 
Sbjct: 783  GVHLRMSCPYTSQQNGRAERVLRTVNNIVRSLLFQAHLPAPYWVEALHTATYLLNLHPTS 842

Query: 210  LLNHIFPHEALFGTGPVYTSLRVFGSLCYPNLVRHTTIKSLPLSLPCIYPGPSINHKGFR 389
             LN   PH ALFG  P Y  LRVFG  CYPN+      K  P S  C++ G S  HKG+R
Sbjct: 843  TLNSSTPHLALFGRPPSYDHLRVFGCKCYPNISATAAHKLAPRSTMCVFLGYSSEHKGYR 902

Query: 390  CLNPENQRVYISRHVRFSELVFSYVDFYKHLSSVPSSLFPQNCDINNL 533
            CL+    R+ ISRHV F E  F + +      + PSS  P N D  +L
Sbjct: 903  CLDISTNRIIISRHVVFDESSFPFAE------TPPSSALPTNLDFLDL 944


>AAL78658.1 Hopscotch polyprotein, partial [Fagus sylvatica]
          Length = 226

 Score =  112 bits (281), Expect = 1e-25
 Identities = 61/151 (40%), Positives = 85/151 (56%)
 Frame = +3

Query: 15  HFSILGIH*ILLPNNSSAKRGK*AQKNRQMTQKICCLLFQARMPFDFWVEALQYAIKLIN 194
           H ++ GI   +    +  + G   +K+R + +    +LF AR+P + W+EA   A+ LIN
Sbjct: 72  HLNMCGIVQHVSCPGTPEQNGVAERKHRHIVETGLTMLFHARLPKNLWIEAFMTAVYLIN 131

Query: 195 ILPTPLLNHIFPHEALFGTGPVYTSLRVFGSLCYPNLVRHTTIKSLPLSLPCIYPGPSIN 374
            LP+  L H  P   L G  P Y SL+VFG  C+P L  +   K  P S PCI+ G S  
Sbjct: 132 RLPSSKLAHDTPFFKLHGVHPDYNSLKVFGCRCFPYLRDYAKNKFEPKSYPCIFIGYSPL 191

Query: 375 HKGFRCLNPENQRVYISRHVRFSELVFSYVD 467
           HKG+RCL+P  +RVY+SRHV F E +  Y D
Sbjct: 192 HKGYRCLHPPTKRVYLSRHVVFDEGILPYTD 222


>JAU84243.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Noccaea caerulescens]
          Length = 244

 Score =  112 bits (280), Expect = 3e-25
 Identities = 59/150 (39%), Positives = 85/150 (56%), Gaps = 1/150 (0%)
 Frame = +3

Query: 15  HFSILGIH*ILLPNNSSAKRGK*AQKNRQMTQKICCLLFQARMPFDFWVEALQYAIKLIN 194
           H    GI   +   ++  + G   +K+R + +    ++F ++MP  +WVEAL  A  LIN
Sbjct: 24  HLQTCGIQQFISCPHTPQQNGLAERKHRHLVELGLSMMFDSKMPQKYWVEALFTANFLIN 83

Query: 195 ILPTPLLNHIF-PHEALFGTGPVYTSLRVFGSLCYPNLVRHTTIKSLPLSLPCIYPGPSI 371
           +LPT  L+    P++ L G  P YT+LR FG  CYP L  +   K  P SL C++ G + 
Sbjct: 84  LLPTTALDSTMSPYQRLLGEAPEYTALRTFGCACYPTLRAYAATKFDPRSLKCVFLGYTA 143

Query: 372 NHKGFRCLNPENQRVYISRHVRFSELVFSY 461
            +KG+RCL P   RVY+SRHV F E VF +
Sbjct: 144 KYKGYRCLYPATGRVYLSRHVLFDEEVFPF 173


>OIW15217.1 hypothetical protein TanjilG_08809 [Lupinus angustifolius]
          Length = 212

 Score =  111 bits (277), Expect = 4e-25
 Identities = 56/134 (41%), Positives = 79/134 (58%)
 Frame = +3

Query: 60  SSAKRGK*AQKNRQMTQKICCLLFQARMPFDFWVEALQYAIKLINILPTPLLNHIFPHEA 239
           ++++ G+   K+R +T+    +LF +++   FWVEA   A+  IN LP+ +L    P E 
Sbjct: 6   TTSQNGRAEHKHRHITETSLTMLFHSQVSTSFWVEAFSTAVYTINRLPSLVLVGKSPFEV 65

Query: 240 LFGTGPVYTSLRVFGSLCYPNLVRHTTIKSLPLSLPCIYPGPSINHKGFRCLNPENQRVY 419
           LFG  P Y +   FG   +P L  + T K LP S PCI+ G S NHKGFRC NP + R+Y
Sbjct: 66  LFGALPNYENFHPFGCRVFPCLRDYVTNKFLPRSAPCIFLGYSANHKGFRCFNPASSRMY 125

Query: 420 ISRHVRFSELVFSY 461
           I+RH +F E  F Y
Sbjct: 126 ITRHAQFDEQFFPY 139


>CAA19715.1 putative protein [Arabidopsis thaliana] CAB79576.1 putative protein
           [Arabidopsis thaliana]
          Length = 1318

 Score =  118 bits (295), Expect = 4e-25
 Identities = 68/165 (41%), Positives = 91/165 (55%), Gaps = 1/165 (0%)
 Frame = +3

Query: 3   KLQPHFSILGIH*ILLPNNSSAKRGK*AQKNRQMTQKICCLLFQARMPFDFWVEALQYAI 182
           K   H    GI   L   ++  + G   +K+R + +    +LFQ+ +P  FWVEA   A 
Sbjct: 405 KFLQHLQSHGIQQQLSCPHTPQQNGLAERKHRHLVELGLSMLFQSHVPHKFWVEAFFTAN 464

Query: 183 KLINILPTPLLNH-IFPHEALFGTGPVYTSLRVFGSLCYPNLVRHTTIKSLPLSLPCIYP 359
            LIN+LPT  L   I P+E L+   P YTSLR FGS C+P L  +   K  P SL C++ 
Sbjct: 465 FLINLLPTSALKESISPYEKLYDKKPDYTSLRSFGSACFPTLRDYAENKFNPCSLKCVFL 524

Query: 360 GPSINHKGFRCLNPENQRVYISRHVRFSELVFSYVDFYKHLSSVP 494
           G +  +KG+RCL P   R+YISRHV F E V+ +   YKHL   P
Sbjct: 525 GYNEKYKGYRCLYPPTGRLYISRHVIFDESVYPFSHTYKHLHPQP 569



 Score = 43.1 bits (100), Expect(2) = 6e-08
 Identities = 25/68 (36%), Positives = 29/68 (42%)
 Frame = +3

Query: 813  HHMITRGKAGIVKPRQXXXXXXXXXXPSSPYHVPTSYTEALKYPHWKLAMIEEYNALLHN 992
            H M+TR K GI KP                Y  P + T ALK+P W  AM EE       
Sbjct: 685  HPMVTRAKVGISKPNPRYVFLSHKVS----YPEPKTVTAALKHPGWTGAMTEEIGNCSET 740

Query: 993  QTWPCSPH 1016
            QTW   P+
Sbjct: 741  QTWSLVPY 748



 Score = 43.1 bits (100), Expect(2) = 6e-08
 Identities = 20/37 (54%), Positives = 27/37 (72%)
 Frame = +2

Query: 1049 F*VKLHPDGTIDHYKARLVSQGFK*LPGIDYDQTFSP 1159
            F  KLH DGT++  KAR+V++GF    GIDY +T+SP
Sbjct: 761  FRTKLHADGTLNKLKARIVAKGFLQEEGIDYLETYSP 797


>ABA97658.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1597

 Score =  117 bits (294), Expect = 6e-25
 Identities = 68/148 (45%), Positives = 83/148 (56%)
 Frame = +3

Query: 57   NSSAKRGK*AQKNRQMTQKICCLLFQARMPFDFWVEALQYAIKLINILPTPLLNHIFPHE 236
            ++S + GK  +  R +   +  LLFQA +P  FWVEAL  A  LIN  PT +L H  P  
Sbjct: 765  HTSPQNGKAERILRSINNIMRSLLFQASLPGTFWVEALHTATHLINRHPTKMLQHHTPFF 824

Query: 237  ALFGTGPVYTSLRVFGSLCYPNLVRHTTIKSLPLSLPCIYPGPSINHKGFRCLNPENQRV 416
            AL+G  P Y  LRVFG  CYPNL      K  P S  CI+ G  ++HKG+RCL+P   RV
Sbjct: 825  ALYGVHPSYAHLRVFGCKCYPNLSATAPHKLSPRSTMCIFLGYPLHHKGYRCLDPSTNRV 884

Query: 417  YISRHVRFSELVFSYVDFYKHLSSVPSS 500
             ISRHV F E  F Y +      S PSS
Sbjct: 885  IISRHVVFDEHSFPYANI-----SSPSS 907



 Score = 53.5 bits (127), Expect(2) = 3e-11
 Identities = 29/67 (43%), Positives = 35/67 (52%)
 Frame = +3

Query: 813  HHMITRGKAGIVKPRQXXXXXXXXXXPSSPYHVPTSYTEALKYPHWKLAMIEEYNALLHN 992
            H M TRGKAG+ KP Q          P     VP +Y  AL  P+W+ AM EE+ AL  N
Sbjct: 1055 HTMTTRGKAGVRKPVQRLNLHASTLSP-----VPRTYRAALADPYWRTAMEEEFTALTAN 1109

Query: 993  QTWPCSP 1013
            +TW   P
Sbjct: 1110 RTWDLVP 1116



 Score = 44.3 bits (103), Expect(2) = 3e-11
 Identities = 20/34 (58%), Positives = 24/34 (70%)
 Frame = +2

Query: 1058 KLHPDGTIDHYKARLVSQGFK*LPGIDYDQTFSP 1159
            K   DGT+D YKAR V +GF    GID+D+TFSP
Sbjct: 1133 KFQSDGTLDRYKARWVLRGFSQRLGIDFDETFSP 1166


>OMO78631.1 Integrase, catalytic core [Corchorus capsularis]
          Length = 577

 Score =  115 bits (289), Expect = 1e-24
 Identities = 67/151 (44%), Positives = 86/151 (56%), Gaps = 2/151 (1%)
 Frame = +3

Query: 90  KNRQMTQKICCLLFQARMPFDFWVEALQYAIKLINILPTPLLNHIFPHEALFGTGPVYTS 269
           K+R + +    LLF +  P  +WVEA   AI LIN  P+ +L+   P E L+   P Y+ 
Sbjct: 278 KHRNIVELGLTLLFHSHTPKWYWVEAFGTAIWLINRQPSRVLDWKSPFELLYNKSPDYSC 337

Query: 270 LRVFGSLCYPNLVRHTTIKSLPLSLPCIYPGPSINHKGFRCLNPENQRVYISRHVRFSEL 449
           LRVFGS C+P L  H+  K  P SLPCI+ G S  HKG+RCL+P + RVYISRHV F E 
Sbjct: 338 LRVFGSKCFPFLRSHSKNKLEPRSLPCIFLGYSELHKGYRCLHPPSGRVYISRHVTFDEK 397

Query: 450 VFSYVDFYKHLSSVPSSLF--PQNCDINNLL 536
           VF + D        P SLF     CD+   +
Sbjct: 398 VFPFKD--------PGSLFAPSDTCDLTEFI 420


>OMO89784.1 Integrase, catalytic core [Corchorus capsularis]
          Length = 1048

 Score =  115 bits (289), Expect = 2e-24
 Identities = 63/152 (41%), Positives = 92/152 (60%), Gaps = 4/152 (2%)
 Frame = +3

Query: 18  FSIL----GIH*ILLPNNSSAKRGK*AQKNRQMTQKICCLLFQARMPFDFWVEALQYAIK 185
           FSIL    GI   L   ++  + G   +K+R + +K   LL Q+ +P  FWVEA Q ++ 
Sbjct: 529 FSILLDSNGITHQLSCPHTPQQNGVAERKHRHVVEKGLYLLSQSSLPSKFWVEAFQTSLY 588

Query: 186 LINILPTPLLNHIFPHEALFGTGPVYTSLRVFGSLCYPNLVRHTTIKSLPLSLPCIYPGP 365
           LIN LPTP+L    P+  LFG  PVY  LR FG  CYP+LV +   K    +  C++ G 
Sbjct: 589 LINRLPTPVLGGKRPYVVLFGKPPVYDHLRTFGCACYPHLVPYNKTKLEFKTRQCVFLGY 648

Query: 366 SINHKGFRCLNPENQRVYISRHVRFSELVFSY 461
            + HKG++CL+P+++R+YISR+V F E +F +
Sbjct: 649 GVQHKGYKCLDPQSRRIYISRNVAFDENLFPF 680



 Score = 46.2 bits (108), Expect(2) = 1e-09
 Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
 Frame = +3

Query: 813  HHMITRGKAGIVKPRQXXXXXXXXXX--PSSPYHV---PTSYTEALKYPHWKLAMIEEYN 977
            H M+TR K GI KP+              S+  H    PT +++A K P W+ AM +E+N
Sbjct: 775  HPMMTRLKVGIRKPKALCTTKHPLPACYSSTLEHSSSEPTCFSQASKDPRWRQAMQDEFN 834

Query: 978  ALLHNQTWPCSP 1013
            ALL N TW   P
Sbjct: 835  ALLRNNTWVLVP 846



 Score = 46.2 bits (108), Expect(2) = 1e-09
 Identities = 20/35 (57%), Positives = 27/35 (77%)
 Frame = +2

Query: 1055 VKLHPDGTIDHYKARLVSQGFK*LPGIDYDQTFSP 1159
            +K   DG+I+ YKARLV++GF    G+DYD+TFSP
Sbjct: 862  IKYKSDGSIERYKARLVAKGFHQQLGLDYDETFSP 896


>EOY32308.1 Uncharacterized protein TCM_040047 [Theobroma cacao]
          Length = 678

 Score =  115 bits (288), Expect = 2e-24
 Identities = 66/191 (34%), Positives = 100/191 (52%), Gaps = 4/191 (2%)
 Frame = +3

Query: 3   KLQPHFSILGIH*ILLPNNSSAKRGK*AQKNRQMTQKICCLLFQARMPFDFWVEALQYAI 182
           K+  + +  GI  +  P  +    G   ++++ + +    LL  A MP  FW  A Q A+
Sbjct: 310 KMSKYLATHGISHLTTPPYTLELNGAAERRHKHIVETGLTLLHHASMPLKFWSHAFQVAV 369

Query: 183 KLINILPTPLLNHIFPHEALFGTGPVYTSLRVFGSLCYPNLVRHTTIKSLPLSLPCIYPG 362
             IN LPTPLLN   P E LF T P Y+ L+VFG LCYP L  +   K  P S PC++  
Sbjct: 370 YPINKLPTPLLNLKSPFEILFETPPNYSKLKVFGCLCYPWLKPYNKHKLQPKSKPCVFLR 429

Query: 363 PSINHKGFRCLNPENQRVYISRHVRFSELVFSYVDFYKHLSSVPSSLFPQNCDINN---- 530
            SIN   ++C + E+QR+++SRHV F E +F +       +S  + +   N  + N    
Sbjct: 430 YSINQSAYKCFDHESQRIFVSRHVMFQEHIFPFTSAKTQTTSRQAMIEEFNALVKNQTWV 489

Query: 531 LLPSTSFMTLL 563
           L+P +S  T++
Sbjct: 490 LVPPSSKQTVI 500



 Score = 44.7 bits (104), Expect(3) = 2e-07
 Identities = 21/37 (56%), Positives = 25/37 (67%)
 Frame = +2

Query: 1049 F*VKLHPDGTIDHYKARLVSQGFK*LPGIDYDQTFSP 1159
            F +K  PDG+ID YKARLV++GF    GIDY  T  P
Sbjct: 506  FKIKRKPDGSIDRYKARLVAKGFHQREGIDYTDTLIP 542



 Score = 32.0 bits (71), Expect(3) = 2e-07
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +3

Query: 921  YTEALKYPHWKLAMIEEYNALLHNQTWPCSP 1013
            +T A      + AMIEE+NAL+ NQTW   P
Sbjct: 462  FTSAKTQTTSRQAMIEEFNALVKNQTWVLVP 492



 Score = 26.9 bits (58), Expect(3) = 2e-07
 Identities = 10/14 (71%), Positives = 13/14 (92%)
 Frame = +1

Query: 1003 LVPPTSSQSLIGCK 1044
            LVPP+S Q++IGCK
Sbjct: 490  LVPPSSKQTVIGCK 503


>OMO61427.1 Zinc finger, CCCH-type [Corchorus capsularis]
          Length = 1996

 Score =  114 bits (285), Expect(2) = 3e-24
 Identities = 61/127 (48%), Positives = 79/127 (62%)
 Frame = +3

Query: 87  QKNRQMTQKICCLLFQARMPFDFWVEALQYAIKLINILPTPLLNHIFPHEALFGTGPVYT 266
           +K+R + +    LLF +  P  +WVEA   AI LIN  P+ +L+   P E L+   P Y+
Sbjct: 595 RKHRNIVELGLTLLFHSHTPKRYWVEAFGTAIWLINRQPSRVLDWKSPFELLYNKSPDYS 654

Query: 267 SLRVFGSLCYPNLVRHTTIKSLPLSLPCIYPGPSINHKGFRCLNPENQRVYISRHVRFSE 446
            LRVFGS C+P L  H+  K  P SLPCI+ G S  HKG+RCL+P + RVYISRHV F E
Sbjct: 655 CLRVFGSKCFPFLRSHSKNKLEPRSLPCIFLGYSELHKGYRCLHPPSGRVYISRHVTFDE 714

Query: 447 LVFSYVD 467
            VF + D
Sbjct: 715 KVFPFKD 721



 Score = 27.3 bits (59), Expect(2) = 3e-24
 Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
 Frame = +1

Query: 37  IRYFCPTTPRQNG--ENEHKKI 96
           ++Y CP TP QNG  E +H+ I
Sbjct: 579 LQYACPKTPEQNGLVERKHRNI 600



 Score = 44.7 bits (104), Expect(3) = 5e-09
 Identities = 25/63 (39%), Positives = 29/63 (46%)
 Frame = +3

Query: 825  TRGKAGIVKPRQXXXXXXXXXXPSSPYHVPTSYTEALKYPHWKLAMIEEYNALLHNQTWP 1004
            TR   GI KP             +S    P S   ALK+P WK AM EE +AL+ N TW 
Sbjct: 841  TRQSHGIAKPNPKYFNDDFCFTATSIPIEPKSVKTALKHPDWKTAMEEEIHALMQNDTWE 900

Query: 1005 CSP 1013
              P
Sbjct: 901  LVP 903



 Score = 42.4 bits (98), Expect(3) = 5e-09
 Identities = 18/37 (48%), Positives = 27/37 (72%)
 Frame = +2

Query: 1049 F*VKLHPDGTIDHYKARLVSQGFK*LPGIDYDQTFSP 1159
            F  K   DG+++  KARLV++GF  +PG+D+ +TFSP
Sbjct: 917  FKTKTKADGSLERLKARLVAKGFNQVPGVDFLETFSP 953



 Score = 22.3 bits (46), Expect(3) = 5e-09
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +1

Query: 1003 LVPPTSSQSLIGCK 1044
            LVP ++S +++GCK
Sbjct: 901  LVPQSNSMNIVGCK 914


>XP_008646585.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC103628087 [Zea mays]
          Length = 1134

 Score =  115 bits (288), Expect = 3e-24
 Identities = 63/144 (43%), Positives = 82/144 (56%)
 Frame = +3

Query: 30  GIH*ILLPNNSSAKRGK*AQKNRQMTQKICCLLFQARMPFDFWVEALQYAIKLINILPTP 209
           G+H  +    +S + G+  +  R M   +  LLFQA +P  +W EAL  A  L+N LPT 
Sbjct: 489 GVHLRMSCPYTSPQNGRAERMIRTMNDVVRSLLFQASLPVSYWAEALGTATYLLNRLPTK 548

Query: 210 LLNHIFPHEALFGTGPVYTSLRVFGSLCYPNLVRHTTIKSLPLSLPCIYPGPSINHKGFR 389
            + H  P+ ALFG  P Y  LRVFG  CYPNL   T  K  P S  C++ G S +HKG+R
Sbjct: 549 AVAHPTPYFALFGVHPSYDHLRVFGCACYPNLASTTPHKLAPRSTRCVFLGYSPDHKGYR 608

Query: 390 CLNPENQRVYISRHVRFSELVFSY 461
           CL+  + RV ISRHV F E  F +
Sbjct: 609 CLDLASHRVLISRHVVFDESDFPF 632


>AAC67200.1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1402

 Score =  115 bits (288), Expect = 3e-24
 Identities = 65/167 (38%), Positives = 93/167 (55%), Gaps = 1/167 (0%)
 Frame = +3

Query: 3    KLQPHFSILGIH*ILLPNNSSAKRGK*AQKNRQMTQKICCLLFQARMPFDFWVEALQYAI 182
            K   H    GI   +   ++  + G   +K+R + +    +LFQ+++P  FWVEA   A 
Sbjct: 600  KFLQHLQNHGIQQHISYPHTPQQNGLAERKHRHLVELGLSMLFQSKVPLKFWVEAFFTAN 659

Query: 183  KLINILPTPLLNH-IFPHEALFGTGPVYTSLRVFGSLCYPNLVRHTTIKSLPLSLPCIYP 359
             LIN+LPT  +   I P+E L  T P YT+LR FG  C+P +  +   K  P SL C++ 
Sbjct: 660  FLINLLPTSAVEDAISPYEKLHQTTPDYTALRSFGCACFPTMRDYAMNKFDPRSLKCVFL 719

Query: 360  GPSINHKGFRCLNPENQRVYISRHVRFSELVFSYVDFYKHLSSVPSS 500
            G +  +KG+RCL P   RVYISRHV F E  + +   YKHL S P++
Sbjct: 720  GYNDKYKGYRCLYPPTGRVYISRHVIFDETAYPFSHHYKHLHSQPTT 766



 Score = 42.4 bits (98), Expect(2) = 7e-06
 Identities = 25/68 (36%), Positives = 28/68 (41%)
 Frame = +3

Query: 813  HHMITRGKAGIVKPRQXXXXXXXXXXPSSPYHVPTSYTEALKYPHWKLAMIEEYNALLHN 992
            H MITR K GI KP                Y  P + T ALK+P W  AM EE       
Sbjct: 896  HPMITRAKVGITKPNPRYVFLSHKVT----YPEPKTVTAALKHPGWTGAMTEEMGNCSET 951

Query: 993  QTWPCSPH 1016
             TW   P+
Sbjct: 952  NTWSLVPY 959



 Score = 37.0 bits (84), Expect(2) = 7e-06
 Identities = 18/37 (48%), Positives = 25/37 (67%)
 Frame = +2

Query: 1049 F*VKLHPDGTIDHYKARLVSQGFK*LPGIDYDQTFSP 1159
            F  KLH DGT++  KAR+V++ F    GI Y +T+SP
Sbjct: 972  FRTKLHADGTLNKLKARIVAKCFLQEEGIGYLETYSP 1008


>JAU04955.1 Copia protein, partial [Noccaea caerulescens]
          Length = 817

 Score =  115 bits (287), Expect = 4e-24
 Identities = 61/147 (41%), Positives = 83/147 (56%)
 Frame = +3

Query: 60  SSAKRGK*AQKNRQMTQKICCLLFQARMPFDFWVEALQYAIKLINILPTPLLNHIFPHEA 239
           +S + G+  +  R +   +  LLFQA++P  +WVEAL  A  L+NILP+  +N+  P   
Sbjct: 18  TSQQNGRAERTLRTINNLVRALLFQAKLPNTYWVEALNMAAHLLNILPSSAINNAIPFTR 77

Query: 240 LFGTGPVYTSLRVFGSLCYPNLVRHTTIKSLPLSLPCIYPGPSINHKGFRCLNPENQRVY 419
           LF     Y  LRVFG LCYPNL+     K  P S  CI+ G   NHKG+RCL+   +R+ 
Sbjct: 78  LFNKPVSYEHLRVFGCLCYPNLLPTAPNKLSPRSARCIFLGYPTNHKGYRCLDLSTRRII 137

Query: 420 ISRHVRFSELVFSYVDFYKHLSSVPSS 500
           ISRHV F E  F +       SS P++
Sbjct: 138 ISRHVVFDENSFPFTSTLSPSSSPPAA 164


>ABF95666.1 retrotransposon protein, putative, Ty1-copia subclass, expressed
           [Oryza sativa Japonica Group]
          Length = 976

 Score =  115 bits (287), Expect = 4e-24
 Identities = 62/137 (45%), Positives = 77/137 (56%)
 Frame = +3

Query: 57  NSSAKRGK*AQKNRQMTQKICCLLFQARMPFDFWVEALQYAIKLINILPTPLLNHIFPHE 236
           ++S + GK  +  R +   +  LLFQA +P  FWVEAL  A  LIN  PT  L H  P  
Sbjct: 339 HTSPQNGKAERTLRSLNNIVRSLLFQASLPASFWVEALYTATHLINRHPTKTLKHHTPFF 398

Query: 237 ALFGTGPVYTSLRVFGSLCYPNLVRHTTIKSLPLSLPCIYPGPSINHKGFRCLNPENQRV 416
           AL+GT P Y  LRVFG  CYPNL      K  P S  C++     +HKG+RC +P   RV
Sbjct: 399 ALYGTHPSYDHLRVFGCKCYPNLSATAANKLSPRSTLCVFRSYPTDHKGYRCFDPIYNRV 458

Query: 417 YISRHVRFSELVFSYVD 467
           YISRHV F E  F + +
Sbjct: 459 YISRHVVFDEHSFPFAE 475



 Score = 48.5 bits (114), Expect(2) = 5e-07
 Identities = 22/34 (64%), Positives = 25/34 (73%)
 Frame = +2

Query: 1058 KLHPDGTIDHYKARLVSQGFK*LPGIDYDQTFSP 1159
            K   DGT+D YKAR V +GF   PGIDYD+TFSP
Sbjct: 557  KFQSDGTLDMYKARWVLRGFTQRPGIDYDETFSP 590



 Score = 34.7 bits (78), Expect(2) = 5e-07
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +3

Query: 891  PSSPYHVPTSYTE--ALKYPHWKLAMIEEYNALLHNQTWPCSP 1013
            P++P    T   +  AL  P+W+ AM +EY AL+ N TW   P
Sbjct: 498  PAAPPGFTTKIQDKAALADPNWRAAMEDEYTALMANNTWDLVP 540