BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00008105
         (1864 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_019190040.1 PREDICTED: tRNA pseudouridine synthase A, mitocho...   633   0.0  
XP_019190041.1 PREDICTED: tRNA pseudouridine synthase A, mitocho...   632   0.0  
XP_009778087.1 PREDICTED: tRNA pseudouridine synthase A, mitocho...   629   0.0  
XP_019255894.1 PREDICTED: tRNA pseudouridine synthase A, mitocho...   628   0.0  
XP_019190039.1 PREDICTED: tRNA pseudouridine synthase A, mitocho...   628   0.0  
XP_019190038.1 PREDICTED: tRNA pseudouridine synthase A, mitocho...   628   0.0  
XP_016456226.1 PREDICTED: tRNA pseudouridine synthase A, mitocho...   625   0.0  
XP_009589249.1 PREDICTED: tRNA pseudouridine synthase A, mitocho...   625   0.0  
XP_006342092.1 PREDICTED: tRNA pseudouridine synthase A, mitocho...   618   0.0  
EOY18823.1 Pseudouridine synthase [Theobroma cacao]                   614   0.0  
XP_017985136.1 PREDICTED: tRNA pseudouridine synthase A, mitocho...   614   0.0  
XP_002307759.2 hypothetical protein POPTR_0005s26830g [Populus t...   612   0.0  
XP_016568306.1 PREDICTED: tRNA pseudouridine synthase A, mitocho...   615   0.0  
XP_004238400.1 PREDICTED: tRNA pseudouridine synthase A, mitocho...   612   0.0  
KNA14783.1 hypothetical protein SOVF_104360 [Spinacia oleracea]       613   0.0  
XP_015074162.1 PREDICTED: tRNA pseudouridine synthase A, mitocho...   612   0.0  
XP_018812063.1 PREDICTED: tRNA pseudouridine synthase A, mitocho...   605   0.0  
XP_019453351.1 PREDICTED: tRNA pseudouridine synthase A, mitocho...   603   0.0  
XP_004292926.1 PREDICTED: tRNA pseudouridine synthase A, mitocho...   605   0.0  
XP_004507719.1 PREDICTED: tRNA pseudouridine synthase A, mitocho...   599   0.0  

>XP_019190040.1 PREDICTED: tRNA pseudouridine synthase A, mitochondrial isoform X3
            [Ipomoea nil]
          Length = 597

 Score =  633 bits (1632), Expect = 0.0
 Identities = 329/511 (64%), Positives = 381/511 (74%), Gaps = 17/511 (3%)
 Frame = -1

Query: 1804 MEVHSSPPLENQEPDTKKLKMXXXXXXXXXXXXXXXXTVDGGAAPIKPARLKRRKVALFF 1625
            M+  + P    +EP  KK KM                  DG A P +  + KRRK+A+FF
Sbjct: 1    MDKPNPPSPLPEEPAPKKQKMSTTTTSDDEEFDPAVAAADGSAPPERKPKYKRRKIAIFF 60

Query: 1624 AYCGVGYQGMQKNPGAKTIEGELEEALYQAGAVPESDRGQSRKYDWARSARTDKGVSAVG 1445
            AYCGVGYQGMQKNPGAKTIEG+LEEAL+ AGAVPE DRGQ R+YDWARSARTDKGVSAVG
Sbjct: 61   AYCGVGYQGMQKNPGAKTIEGDLEEALFHAGAVPEQDRGQPRRYDWARSARTDKGVSAVG 120

Query: 1444 QVVSGRFYVDPPGFVERLNSKLPDQIRIFGYKRVTGSFHAKKFCDRRRYMYLLPVFALDS 1265
            QVVSGRFY+DPPG V+RLNS L  QIRIFGYKR T SF+AKKFCDRRRY+YL+PVFALD 
Sbjct: 121  QVVSGRFYIDPPGLVDRLNSNLASQIRIFGYKRTTASFNAKKFCDRRRYVYLIPVFALDP 180

Query: 1264 SCHRDRESVVASLGSGNDLVKCLECSERGRKVFGVMGKRAFDDLKNEKEGLDIESGS-LS 1088
            S HRDRESV+ASLGSGN+LVKCLECSERGRKVFG+MGKR+FD   ++ E + + SGS +S
Sbjct: 181  SAHRDRESVLASLGSGNELVKCLECSERGRKVFGIMGKRSFD---SKSEPIVVSSGSGIS 237

Query: 1087 NNTVEKEEIENGVSVNXXXXXXXXXXXXXGDVGNGFGVAE-------------VKKSEFC 947
            +NT + +  +  ++ N               VGN     E             V    F 
Sbjct: 238  SNTGDSQNQQENMN-NSIDDESNPNSEIEKQVGNETSQNEKNEVTNMEVEEAIVPNKIFS 296

Query: 946  YGDKERERFNRILKYYEGTHNFHNFTTRTKAEDPSAHRYIISFDADSTVVVDGIEFVKCE 767
            YGD+E++RFNRILKYYEGTHNFHNFTTRTKAEDP+A RYIISF A++ V V+GI FVKCE
Sbjct: 297  YGDEEKDRFNRILKYYEGTHNFHNFTTRTKAEDPAAKRYIISFTANTVVEVEGINFVKCE 356

Query: 766  VVGQSFMLHQIRKMIGLAVAIMRDCAPESLIETAFRKDVNINVPMAPEVGLYLDECFFYS 587
            VVGQSFMLHQIRKMIGLAVAIMR+ APESLI+TAF KDVNINVPMAPEVGLYLDECFF S
Sbjct: 357  VVGQSFMLHQIRKMIGLAVAIMRNYAPESLIQTAFSKDVNINVPMAPEVGLYLDECFFSS 416

Query: 586  YNNKWEDSHEEVSMKAYAEEAEEFKMKYIFSHIASAEHKDGAVALWLHSLNYRNYPDLHW 407
            YN KW D HEE+SMKAYA+ AE+FKMKYI+SHIAS EHK+G + LWLHSLNYRNYPDL +
Sbjct: 417  YNKKWTD-HEELSMKAYADIAEDFKMKYIYSHIASTEHKEGVMGLWLHSLNYRNYPDLRF 475

Query: 406  SDCKAENIEVKDLQEG---SNDEVNTIKTVE 323
            S+C  E  + K + +    +N E    +TVE
Sbjct: 476  SNCD-ETTDAKSIPDSRTVNNGEALDAETVE 505


>XP_019190041.1 PREDICTED: tRNA pseudouridine synthase A, mitochondrial isoform X4
            [Ipomoea nil]
          Length = 586

 Score =  632 bits (1629), Expect = 0.0
 Identities = 340/551 (61%), Positives = 393/551 (71%), Gaps = 43/551 (7%)
 Frame = -1

Query: 1804 MEVHSSPPLENQEPDTKKLKMXXXXXXXXXXXXXXXXTVDGGAAPIKPARLKRRKVALFF 1625
            M+  + P    +EP  KK KM                  DG A P +  + KRRK+A+FF
Sbjct: 1    MDKPNPPSPLPEEPAPKKQKMSTTTTSDDEEFDPAVAAADGSAPPERKPKYKRRKIAIFF 60

Query: 1624 AYCGVGYQGMQKNPGAKTIEGELEEALYQAGAVPESDRGQSRKYDWARSARTDKGVSAVG 1445
            AYCGVGYQGMQKNPGAKTIEG+LEEAL+ AGAVPE DRGQ R+YDWARSARTDKGVSAVG
Sbjct: 61   AYCGVGYQGMQKNPGAKTIEGDLEEALFHAGAVPEQDRGQPRRYDWARSARTDKGVSAVG 120

Query: 1444 QVVSGRFYVDPPGFVERLNSKLPDQIRIFGYKRVTGSFHAKKFCDRRRYMYLLPVFALDS 1265
            QVVSGRFY+DPPG V+RLNS L  QIRIFGYKR T SF+AKKFCDRRRY+YL+PVFALD 
Sbjct: 121  QVVSGRFYIDPPGLVDRLNSNLASQIRIFGYKRTTASFNAKKFCDRRRYVYLIPVFALDP 180

Query: 1264 SCHRDRESVVASLGSGNDLVKCLECSERGRKVFGVMGKRAFD------------------ 1139
            S HRDRESV+ASLGSGN+LVKCLECSERGRKVFG+MGKR+FD                  
Sbjct: 181  SAHRDRESVLASLGSGNELVKCLECSERGRKVFGIMGKRSFDSKSEPIVVSSGSGISSNT 240

Query: 1138 -DLKNEKEGLD--IESGS--LSN---NTVEKEEIENGV-SVNXXXXXXXXXXXXXGDVGN 986
             D +N++E ++  I SGS  LSN   +  ++E ++N + SV                VGN
Sbjct: 241  GDSQNQQENMNNSIHSGSGILSNTGHSQNQQENMKNSIHSVENGDDESNPNSEIEKQVGN 300

Query: 985  GFGVAE-------------VKKSEFCYGDKERERFNRILKYYEGTHNFHNFTTRTKAEDP 845
                 E             V    F YGD+E++RFNRILKYYEGTHNFHNFTTRTKAEDP
Sbjct: 301  ETSQNEKNEVTNMEVEEAIVPNKIFSYGDEEKDRFNRILKYYEGTHNFHNFTTRTKAEDP 360

Query: 844  SAHRYIISFDADSTVVVDGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRDCAPESLIETA 665
            +A RYIISF A++ V V+GI FVKCEVVGQSFMLHQIRKMIGLAVAIMR+ APESLI+TA
Sbjct: 361  AAKRYIISFTANTVVEVEGINFVKCEVVGQSFMLHQIRKMIGLAVAIMRNYAPESLIQTA 420

Query: 664  FRKDVNINVPMAPEVGLYLDECFFYSYNNKWEDSHEEVSMKAYAEEAEEFKMKYIFSHIA 485
            F KDVNINVPMAPEVGLYLDECFF SYN KW D HEE+SMKAYA+ AE+FKMKYI+SHIA
Sbjct: 421  FSKDVNINVPMAPEVGLYLDECFFSSYNKKWTD-HEELSMKAYADIAEDFKMKYIYSHIA 479

Query: 484  SAEHKDGAVALWLHSLNYRNYPDLHWSDCKAENIEVKDLQEG---SNDEVNTIKTVEVTN 314
            S EHK+G + LWLHSLNYRNYPDL +S+C  E  + K + +    +N E    KTVE  +
Sbjct: 480  STEHKEGVMGLWLHSLNYRNYPDLRFSNCD-ETTDAKSIPDSRTVNNGEALDAKTVEAAD 538

Query: 313  VAEGVDV*GKN 281
             A+     GKN
Sbjct: 539  NADSCP--GKN 547


>XP_009778087.1 PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Nicotiana
            sylvestris]
          Length = 596

 Score =  629 bits (1622), Expect = 0.0
 Identities = 329/518 (63%), Positives = 383/518 (73%), Gaps = 25/518 (4%)
 Frame = -1

Query: 1804 MEVHSSPPLENQEPDTKKLKMXXXXXXXXXXXXXXXXTVDGGAAPIKPARLKRRKVALFF 1625
            ME  ++P    +EP+ KK KM                    G AP +  R KRRK+A+FF
Sbjct: 1    MENKTAPLSTIEEPEPKKQKMSTTTSDDEEAATAAV--AGDGPAPERKPRYKRRKIAIFF 58

Query: 1624 AYCGVGYQGMQKNPGAKTIEGELEEALYQAGAVPESDRGQSRKYDWARSARTDKGVSAVG 1445
            AYCGVGYQGMQKNPGAKTIEG+LEEALYQAG VPE D+ Q R+YDWARSARTDKGVSAVG
Sbjct: 59   AYCGVGYQGMQKNPGAKTIEGDLEEALYQAGGVPEHDKCQPRRYDWARSARTDKGVSAVG 118

Query: 1444 QVVSGRFYVDPPGFVERLNSKLPDQIRIFGYKRVTGSFHAKKFCDRRRYMYLLPVFALDS 1265
            QVVSGRFYVDPPGF++RLNS L  QIRIFG+KRVT +F+AKKFCDRRRY+Y +PVFALD 
Sbjct: 119  QVVSGRFYVDPPGFIDRLNSILSPQIRIFGFKRVTNAFNAKKFCDRRRYVYFVPVFALDP 178

Query: 1264 SCHRDRESVVASLGSGNDLVKCLECSERGRKVFGVMGKRAFDDLKNEKEGLDIESGSLSN 1085
            S HRDRE+V+AS+GSG +LVKCLECSERGRKVFGVMGKR +D +  +   +  E G++ N
Sbjct: 179  SSHRDRETVLASVGSGKELVKCLECSERGRKVFGVMGKRVYDPI-TKSVIVVAEPGNMPN 237

Query: 1084 N---TVEKEEIENGVSVNXXXXXXXXXXXXXGDVGNGFGVAE------------------ 968
            N    V  + IE+ V+VN               + NG  ++E                  
Sbjct: 238  NGDAQVTLQNIESNVNVNANDVITESNMV----IENGASLSEKGEETKEEVEKGDENAKA 293

Query: 967  ----VKKSEFCYGDKERERFNRILKYYEGTHNFHNFTTRTKAEDPSAHRYIISFDADSTV 800
                V++S F YG+KE+ERFNRILKYYEGTHNFHNFTTRTKA+DP+A RYIISF A++ V
Sbjct: 294  IEEQVEESVFSYGEKEKERFNRILKYYEGTHNFHNFTTRTKADDPAAKRYIISFTANTIV 353

Query: 799  VVDGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRDCAPESLIETAFRKDVNINVPMAPEV 620
             V+GIEFVKCEVVGQSFMLHQIRKMIGLAVAIMR+CAPESLI+TAFR+DVNINVPMAPEV
Sbjct: 354  NVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIQTAFRRDVNINVPMAPEV 413

Query: 619  GLYLDECFFYSYNNKWEDSHEEVSMKAYAEEAEEFKMKYIFSHIASAEHKDGAVALWLHS 440
            GLYLDECFF SYN+KW+D+HEEVS+KAY E AEEFKMKYI+SHIAS EHKDG +ALWLHS
Sbjct: 414  GLYLDECFFTSYNSKWKDTHEEVSLKAYTEAAEEFKMKYIYSHIASTEHKDGTMALWLHS 473

Query: 439  LNYRNYPDLHWSDCKAENIEVKDLQEGSNDEVNTIKTV 326
            LNYRNYPDL   D         D   G++D    I+ V
Sbjct: 474  LNYRNYPDLRGVD--------NDNSAGASDGSKAIEAV 503


>XP_019255894.1 PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Nicotiana
            attenuata] OIS97052.1 putative trna uridine synthase
            [Nicotiana attenuata]
          Length = 596

 Score =  628 bits (1620), Expect = 0.0
 Identities = 325/493 (65%), Positives = 374/493 (75%), Gaps = 25/493 (5%)
 Frame = -1

Query: 1804 MEVHSSPPLENQEPDTKKLKMXXXXXXXXXXXXXXXXTVDGGAAPIKPARLKRRKVALFF 1625
            ME  ++P    +EP+ KK KM                    G AP +  R KRRK+A+FF
Sbjct: 1    MENKTAPLSTIEEPELKKQKMSTTTSDDEEAATAAV--AGDGPAPERKPRYKRRKIAIFF 58

Query: 1624 AYCGVGYQGMQKNPGAKTIEGELEEALYQAGAVPESDRGQSRKYDWARSARTDKGVSAVG 1445
            AYCGVGYQGMQKNPGAKTIEG+LEEALYQAG VP+ D+ Q R+YDWARSARTDKGVSAVG
Sbjct: 59   AYCGVGYQGMQKNPGAKTIEGDLEEALYQAGGVPDHDKCQPRRYDWARSARTDKGVSAVG 118

Query: 1444 QVVSGRFYVDPPGFVERLNSKLPDQIRIFGYKRVTGSFHAKKFCDRRRYMYLLPVFALDS 1265
            QVVSGRFYVDPPGF++RLNS L  QIRIFG+KRVT +F+AKKFCDRRRY+Y +PVFALD 
Sbjct: 119  QVVSGRFYVDPPGFIDRLNSILSPQIRIFGFKRVTNAFNAKKFCDRRRYVYFVPVFALDP 178

Query: 1264 SCHRDRESVVASLGSGNDLVKCLECSERGRKVFGVMGKRAFDDLKNEKEGLDIESGSLSN 1085
            S HRDRE+V+AS+GSG +LVKCLECSERGRKVFGVMGKR FD +  +   +  E G++ N
Sbjct: 179  SSHRDRETVLASVGSGKELVKCLECSERGRKVFGVMGKRVFDPI-TKSVIVVAEPGNMPN 237

Query: 1084 N---TVEKEEIENGVSVNXXXXXXXXXXXXXGDVGNGFGVAE------------------ 968
            N    V  + IE+ V+VN                 NG  ++E                  
Sbjct: 238  NGDAQVTLQNIESNVNVNANDVITESNMVTE----NGASLSEKGEETKEEVEKGDENAKA 293

Query: 967  ----VKKSEFCYGDKERERFNRILKYYEGTHNFHNFTTRTKAEDPSAHRYIISFDADSTV 800
                V++S F YG+KE+ERFNRILKYYEGTHNFHNFTTRTKA+DP+A RYIISF A+S V
Sbjct: 294  IEEQVEESVFSYGEKEKERFNRILKYYEGTHNFHNFTTRTKADDPAAKRYIISFTANSIV 353

Query: 799  VVDGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRDCAPESLIETAFRKDVNINVPMAPEV 620
             V+GIEFVKCEVVGQSFMLHQIRKMIGLAVAIMR+CAPESLI+TAFR+DVNINVPMAPEV
Sbjct: 354  NVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIQTAFRRDVNINVPMAPEV 413

Query: 619  GLYLDECFFYSYNNKWEDSHEEVSMKAYAEEAEEFKMKYIFSHIASAEHKDGAVALWLHS 440
            GLYLDECFF SYN+KW+D+HEEVS+KAY E AEEFKMKYI+SHIAS EHKDG +ALWLHS
Sbjct: 414  GLYLDECFFTSYNSKWKDTHEEVSLKAYTEAAEEFKMKYIYSHIASTEHKDGTMALWLHS 473

Query: 439  LNYRNYPDLHWSD 401
            LNYRNYPDL   D
Sbjct: 474  LNYRNYPDLRGVD 486


>XP_019190039.1 PREDICTED: tRNA pseudouridine synthase A, mitochondrial isoform X2
            [Ipomoea nil]
          Length = 627

 Score =  628 bits (1619), Expect = 0.0
 Identities = 335/537 (62%), Positives = 387/537 (72%), Gaps = 43/537 (8%)
 Frame = -1

Query: 1804 MEVHSSPPLENQEPDTKKLKMXXXXXXXXXXXXXXXXTVDGGAAPIKPARLKRRKVALFF 1625
            M+  + P    +EP  KK KM                  DG A P +  + KRRK+A+FF
Sbjct: 1    MDKPNPPSPLPEEPAPKKQKMSTTTTSDDEEFDPAVAAADGSAPPERKPKYKRRKIAIFF 60

Query: 1624 AYCGVGYQGMQKNPGAKTIEGELEEALYQAGAVPESDRGQSRKYDWARSARTDKGVSAVG 1445
            AYCGVGYQGMQKNPGAKTIEG+LEEAL+ AGAVPE DRGQ R+YDWARSARTDKGVSAVG
Sbjct: 61   AYCGVGYQGMQKNPGAKTIEGDLEEALFHAGAVPEQDRGQPRRYDWARSARTDKGVSAVG 120

Query: 1444 QVVSGRFYVDPPGFVERLNSKLPDQIRIFGYKRVTGSFHAKKFCDRRRYMYLLPVFALDS 1265
            QVVSGRFY+DPPG V+RLNS L  QIRIFGYKR T SF+AKKFCDRRRY+YL+PVFALD 
Sbjct: 121  QVVSGRFYIDPPGLVDRLNSNLASQIRIFGYKRTTASFNAKKFCDRRRYVYLIPVFALDP 180

Query: 1264 SCHRDRESVVASLGSGNDLVKCLECSERGRKVFGVMGKRAFD------------------ 1139
            S HRDRESV+ASLGSGN+LVKCLECSERGRKVFG+MGKR+FD                  
Sbjct: 181  SAHRDRESVLASLGSGNELVKCLECSERGRKVFGIMGKRSFDSKSEPIVVSSGSGISSNT 240

Query: 1138 -DLKNEKEGLD--IESGS--LSN---NTVEKEEIENGV-SVNXXXXXXXXXXXXXGDVGN 986
             D +N++E ++  I SGS  LSN   +  ++E ++N + SV                VGN
Sbjct: 241  GDSQNQQENMNNSIHSGSGILSNTGHSQNQQENMKNSIHSVENGDDESNPNSEIEKQVGN 300

Query: 985  GFGVAE-------------VKKSEFCYGDKERERFNRILKYYEGTHNFHNFTTRTKAEDP 845
                 E             V    F YGD+E++RFNRILKYYEGTHNFHNFTTRTKAEDP
Sbjct: 301  ETSQNEKNEVTNMEVEEAIVPNKIFSYGDEEKDRFNRILKYYEGTHNFHNFTTRTKAEDP 360

Query: 844  SAHRYIISFDADSTVVVDGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRDCAPESLIETA 665
            +A RYIISF A++ V V+GI FVKCEVVGQSFMLHQIRKMIGLAVAIMR+ APESLI+TA
Sbjct: 361  AAKRYIISFTANTVVEVEGINFVKCEVVGQSFMLHQIRKMIGLAVAIMRNYAPESLIQTA 420

Query: 664  FRKDVNINVPMAPEVGLYLDECFFYSYNNKWEDSHEEVSMKAYAEEAEEFKMKYIFSHIA 485
            F KDVNINVPMAPEVGLYLDECFF SYN KW D HEE+SMKAYA+ AE+FKMKYI+SHIA
Sbjct: 421  FSKDVNINVPMAPEVGLYLDECFFSSYNKKWTD-HEELSMKAYADIAEDFKMKYIYSHIA 479

Query: 484  SAEHKDGAVALWLHSLNYRNYPDLHWSDCKAENIEVKDLQEG---SNDEVNTIKTVE 323
            S EHK+G + LWLHSLNYRNYPDL +S+C  E  + K + +    +N E    +TVE
Sbjct: 480  STEHKEGVMGLWLHSLNYRNYPDLRFSNCD-ETTDAKSIPDSRTVNNGEALDAETVE 535


>XP_019190038.1 PREDICTED: tRNA pseudouridine synthase A, mitochondrial isoform X1
            [Ipomoea nil]
          Length = 627

 Score =  628 bits (1619), Expect = 0.0
 Identities = 335/537 (62%), Positives = 387/537 (72%), Gaps = 43/537 (8%)
 Frame = -1

Query: 1804 MEVHSSPPLENQEPDTKKLKMXXXXXXXXXXXXXXXXTVDGGAAPIKPARLKRRKVALFF 1625
            M+  + P    +EP  KK KM                  DG A P +  + KRRK+A+FF
Sbjct: 1    MDKPNPPSPLPEEPAPKKQKMSTTTTSDDEEFDPAVAAADGSAPPERKPKYKRRKIAIFF 60

Query: 1624 AYCGVGYQGMQKNPGAKTIEGELEEALYQAGAVPESDRGQSRKYDWARSARTDKGVSAVG 1445
            AYCGVGYQGMQKNPGAKTIEG+LEEAL+ AGAVPE DRGQ R+YDWARSARTDKGVSAVG
Sbjct: 61   AYCGVGYQGMQKNPGAKTIEGDLEEALFHAGAVPEQDRGQPRRYDWARSARTDKGVSAVG 120

Query: 1444 QVVSGRFYVDPPGFVERLNSKLPDQIRIFGYKRVTGSFHAKKFCDRRRYMYLLPVFALDS 1265
            QVVSGRFY+DPPG V+RLNS L  QIRIFGYKR T SF+AKKFCDRRRY+YL+PVFALD 
Sbjct: 121  QVVSGRFYIDPPGLVDRLNSNLASQIRIFGYKRTTASFNAKKFCDRRRYVYLIPVFALDP 180

Query: 1264 SCHRDRESVVASLGSGNDLVKCLECSERGRKVFGVMGKRAFD------------------ 1139
            S HRDRESV+ASLGSGN+LVKCLECSERGRKVFG+MGKR+FD                  
Sbjct: 181  SAHRDRESVLASLGSGNELVKCLECSERGRKVFGIMGKRSFDSKSEPIVVSSGSGISSNT 240

Query: 1138 -DLKNEKEGLD--IESGS--LSN---NTVEKEEIENGV-SVNXXXXXXXXXXXXXGDVGN 986
             D +N++E ++  I SGS  LSN   +  ++E ++N + SV                VGN
Sbjct: 241  GDSQNQQENMNNSIHSGSGILSNTGHSQNQQENMKNSIHSVENGDDESNPNSEIEKQVGN 300

Query: 985  GFGVAE-------------VKKSEFCYGDKERERFNRILKYYEGTHNFHNFTTRTKAEDP 845
                 E             V    F YGD+E++RFNRILKYYEGTHNFHNFTTRTKAEDP
Sbjct: 301  ETSQNEKNEVTNMEVEEAIVPNKIFSYGDEEKDRFNRILKYYEGTHNFHNFTTRTKAEDP 360

Query: 844  SAHRYIISFDADSTVVVDGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRDCAPESLIETA 665
            +A RYIISF A++ V V+GI FVKCEVVGQSFMLHQIRKMIGLAVAIMR+ APESLI+TA
Sbjct: 361  AAKRYIISFTANTVVEVEGINFVKCEVVGQSFMLHQIRKMIGLAVAIMRNYAPESLIQTA 420

Query: 664  FRKDVNINVPMAPEVGLYLDECFFYSYNNKWEDSHEEVSMKAYAEEAEEFKMKYIFSHIA 485
            F KDVNINVPMAPEVGLYLDECFF SYN KW D HEE+SMKAYA+ AE+FKMKYI+SHIA
Sbjct: 421  FSKDVNINVPMAPEVGLYLDECFFSSYNKKWTD-HEELSMKAYADIAEDFKMKYIYSHIA 479

Query: 484  SAEHKDGAVALWLHSLNYRNYPDLHWSDCKAENIEVKDLQEG---SNDEVNTIKTVE 323
            S EHK+G + LWLHSLNYRNYPDL +S+C  E  + K + +    +N E    +TVE
Sbjct: 480  STEHKEGVMGLWLHSLNYRNYPDLRFSNCD-ETTDAKSIPDSRTVNNGEALDAETVE 535


>XP_016456226.1 PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
            [Nicotiana tabacum]
          Length = 596

 Score =  625 bits (1611), Expect = 0.0
 Identities = 324/492 (65%), Positives = 370/492 (75%), Gaps = 24/492 (4%)
 Frame = -1

Query: 1804 MEVHSSPPLENQEPDTKKLKMXXXXXXXXXXXXXXXXTVDGGAAPIKPARLKRRKVALFF 1625
            ME   +P     EP  KK KM                    G AP +  R KRRK+ALFF
Sbjct: 1    MENKIAPLSTIDEPQPKKQKMSTTTSDDEEAATAAV--AGDGPAPERKPRYKRRKIALFF 58

Query: 1624 AYCGVGYQGMQKNPGAKTIEGELEEALYQAGAVPESDRGQSRKYDWARSARTDKGVSAVG 1445
            AYCGVGYQGMQKNPGAKTIEG+LEEALYQAG VP+ D+ Q R+YDWARSARTDKGVSAVG
Sbjct: 59   AYCGVGYQGMQKNPGAKTIEGDLEEALYQAGGVPDHDKCQPRRYDWARSARTDKGVSAVG 118

Query: 1444 QVVSGRFYVDPPGFVERLNSKLPDQIRIFGYKRVTGSFHAKKFCDRRRYMYLLPVFALDS 1265
            QVVSGRFYVDPPGF++RLNS L  QIRIFG+KRVT +F+AKKFCDRRRY+Y +PVFALD 
Sbjct: 119  QVVSGRFYVDPPGFIDRLNSILSPQIRIFGFKRVTNAFNAKKFCDRRRYVYFVPVFALDP 178

Query: 1264 SCHRDRESVVASLGSGNDLVKCLECSERGRKVFGVMGKRAFDD----------------- 1136
            S HRDRE+V+AS+GSG +LVKCLECSERGRKVFGVMGKR FD                  
Sbjct: 179  SSHRDRETVLASVGSGKELVKCLECSERGRKVFGVMGKRVFDPITKSVIVVAEPCNMPNT 238

Query: 1135 ------LKNEKEGLDIESGSLSNNTVEKEEIENGVSVNXXXXXXXXXXXXXGDVGNGFGV 974
                  L+N +  +++ +  +   T     IENG SV+              +  N   V
Sbjct: 239  GDAQLTLQNTESNVNVNANDVI--TESNMVIENGASVSEKVEETKEEVEKGDE--NAKTV 294

Query: 973  AE-VKKSEFCYGDKERERFNRILKYYEGTHNFHNFTTRTKAEDPSAHRYIISFDADSTVV 797
             E V++S FCYG+KE+ERFNRILKYYEGTHNFHNFTTRTKA+DP+A RYIISF A++ V 
Sbjct: 295  EEQVEESVFCYGEKEKERFNRILKYYEGTHNFHNFTTRTKADDPAAKRYIISFTANTIVN 354

Query: 796  VDGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRDCAPESLIETAFRKDVNINVPMAPEVG 617
            V+ IEFVKCEVVGQSFMLHQIRKMIGLAVAIMR+CAPESLI+TAFR+DVNINVPMAPEVG
Sbjct: 355  VESIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIQTAFRRDVNINVPMAPEVG 414

Query: 616  LYLDECFFYSYNNKWEDSHEEVSMKAYAEEAEEFKMKYIFSHIASAEHKDGAVALWLHSL 437
            LYLDECFF SYN+KW+D+HEEVS+KAY+E AEEFKMKYI+SHIAS EHKDG +ALWLHSL
Sbjct: 415  LYLDECFFTSYNSKWKDTHEEVSLKAYSEAAEEFKMKYIYSHIASTEHKDGTMALWLHSL 474

Query: 436  NYRNYPDLHWSD 401
            NYRNYPDL   D
Sbjct: 475  NYRNYPDLRAVD 486


>XP_009589249.1 PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
            [Nicotiana tomentosiformis]
          Length = 596

 Score =  625 bits (1611), Expect = 0.0
 Identities = 324/492 (65%), Positives = 370/492 (75%), Gaps = 24/492 (4%)
 Frame = -1

Query: 1804 MEVHSSPPLENQEPDTKKLKMXXXXXXXXXXXXXXXXTVDGGAAPIKPARLKRRKVALFF 1625
            ME   +P     EP  KK KM                    G AP +  R KRRK+ALFF
Sbjct: 1    MENKIAPLSTIDEPQPKKQKMSTTTSDDEEAATAAV--AGDGPAPERKPRYKRRKIALFF 58

Query: 1624 AYCGVGYQGMQKNPGAKTIEGELEEALYQAGAVPESDRGQSRKYDWARSARTDKGVSAVG 1445
            AYCGVGYQGMQKNPGAKTIEG+LEEALYQAG VP+ D+ Q R+YDWARSARTDKGVSAVG
Sbjct: 59   AYCGVGYQGMQKNPGAKTIEGDLEEALYQAGGVPDHDKCQPRRYDWARSARTDKGVSAVG 118

Query: 1444 QVVSGRFYVDPPGFVERLNSKLPDQIRIFGYKRVTGSFHAKKFCDRRRYMYLLPVFALDS 1265
            QVVSGRFYVDPPGF++RLNS L  QIRIFG+KRVT +F+AKKFCDRRRY+Y +PVFALD 
Sbjct: 119  QVVSGRFYVDPPGFIDRLNSILSPQIRIFGFKRVTNAFNAKKFCDRRRYVYFVPVFALDP 178

Query: 1264 SCHRDRESVVASLGSGNDLVKCLECSERGRKVFGVMGKRAFDD----------------- 1136
            S HRDRE+V+AS+GSG +LVKCLECSERGRKVFGVMGKR FD                  
Sbjct: 179  SSHRDRETVLASVGSGKELVKCLECSERGRKVFGVMGKRVFDPITKSVIVVAEPCNMPNT 238

Query: 1135 ------LKNEKEGLDIESGSLSNNTVEKEEIENGVSVNXXXXXXXXXXXXXGDVGNGFGV 974
                  L+N +  +++ +  +   T     IENG SV+              +  N   V
Sbjct: 239  GDAQLTLQNTESNVNVNANDVI--TESNMVIENGASVSEKVEETKEEVEKGDE--NAKTV 294

Query: 973  AE-VKKSEFCYGDKERERFNRILKYYEGTHNFHNFTTRTKAEDPSAHRYIISFDADSTVV 797
             E V++S FCYG+KE+ERFNRILKYYEGTHNFHNFTTRTKA+DP+A RYIISF A++ V 
Sbjct: 295  EEQVEESVFCYGEKEKERFNRILKYYEGTHNFHNFTTRTKADDPAAKRYIISFTANTIVN 354

Query: 796  VDGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRDCAPESLIETAFRKDVNINVPMAPEVG 617
            V+ IEFVKCEVVGQSFMLHQIRKMIGLAVAIMR+CAPESLI+TAFR+DVNINVPMAPEVG
Sbjct: 355  VESIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIQTAFRRDVNINVPMAPEVG 414

Query: 616  LYLDECFFYSYNNKWEDSHEEVSMKAYAEEAEEFKMKYIFSHIASAEHKDGAVALWLHSL 437
            LYLDECFF SYN+KW+D+HEEVS+KAY+E AEEFKMKYI+SHIAS EHKDG +ALWLHSL
Sbjct: 415  LYLDECFFTSYNSKWKDTHEEVSLKAYSEAAEEFKMKYIYSHIASTEHKDGTMALWLHSL 474

Query: 436  NYRNYPDLHWSD 401
            NYRNYPDL   D
Sbjct: 475  NYRNYPDLRAVD 486


>XP_006342092.1 PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Solanum
            tuberosum]
          Length = 569

 Score =  618 bits (1594), Expect = 0.0
 Identities = 314/469 (66%), Positives = 363/469 (77%), Gaps = 1/469 (0%)
 Frame = -1

Query: 1804 MEVHSSPPLENQEPDTKKLKMXXXXXXXXXXXXXXXXTVDGGAAPIKPARLKRRKVALFF 1625
            ME    P    +EP  KKLKM                    G+AP +  R KRRKVA+FF
Sbjct: 1    MEKEPVPSSITEEPQPKKLKMSTTTTSDDEEYAAG---AGDGSAPERKPRYKRRKVAIFF 57

Query: 1624 AYCGVGYQGMQKNPGAKTIEGELEEALYQAGAVPESDRGQSRKYDWARSARTDKGVSAVG 1445
            AYCGVGYQGMQKNPGAKTIEG+LEEALYQAG VP+ D+ Q RKY+WARSARTDKGVSAVG
Sbjct: 58   AYCGVGYQGMQKNPGAKTIEGDLEEALYQAGGVPDHDKCQPRKYEWARSARTDKGVSAVG 117

Query: 1444 QVVSGRFYVDPPGFVERLNSKLPDQIRIFGYKRVTGSFHAKKFCDRRRYMYLLPVFALDS 1265
            QVVSGRFYVDPPGF++RLNS L  QIRIFG+KRVT +F AKKFCD+RRY+YL+PVFALD 
Sbjct: 118  QVVSGRFYVDPPGFIDRLNSILVPQIRIFGFKRVTNAFSAKKFCDKRRYVYLVPVFALDP 177

Query: 1264 SCHRDRESVVASLGSGNDLVKCLECSERGRKVFGVMGKRAFDDLKNEKEGLDIESGSLSN 1085
              HRDRESV+ASLGSG +L KCL C ERGRKV GVMG+R FD +      +D    + ++
Sbjct: 178  YAHRDRESVLASLGSGKELAKCLNCPERGRKVVGVMGRRVFDPITQSVIIVDAPVVNAND 237

Query: 1084 NTVEKEE-IENGVSVNXXXXXXXXXXXXXGDVGNGFGVAEVKKSEFCYGDKERERFNRIL 908
             T +    IEN  S++              +  N     +V++S FCYG+KE+ERFNRIL
Sbjct: 238  PTTDTNMVIENEASLSEKVEERNGEVEGSNE--NAKMEEQVEESVFCYGEKEKERFNRIL 295

Query: 907  KYYEGTHNFHNFTTRTKAEDPSAHRYIISFDADSTVVVDGIEFVKCEVVGQSFMLHQIRK 728
            KYYEGTHNFHNFTTRTKA+DP+A RYIISF+A++ V VDGI+FVKCEVVGQSFMLHQIRK
Sbjct: 296  KYYEGTHNFHNFTTRTKADDPAAKRYIISFNANTVVNVDGIDFVKCEVVGQSFMLHQIRK 355

Query: 727  MIGLAVAIMRDCAPESLIETAFRKDVNINVPMAPEVGLYLDECFFYSYNNKWEDSHEEVS 548
            MIGLAVAIMR+CAPESLI TAFR+DVNINVPMAPEVGLYLDECFF SYN+KW+D+HEEVS
Sbjct: 356  MIGLAVAIMRNCAPESLIVTAFRRDVNINVPMAPEVGLYLDECFFTSYNSKWKDTHEEVS 415

Query: 547  MKAYAEEAEEFKMKYIFSHIASAEHKDGAVALWLHSLNYRNYPDLHWSD 401
            +KAY EEAEEFKMKYI+SHIAS E K+G +A+WLHSLN+RNYPDL   D
Sbjct: 416  LKAYLEEAEEFKMKYIYSHIASTEQKEGTMAVWLHSLNHRNYPDLRAVD 464


>EOY18823.1 Pseudouridine synthase [Theobroma cacao]
          Length = 507

 Score =  614 bits (1584), Expect = 0.0
 Identities = 317/497 (63%), Positives = 365/497 (73%), Gaps = 8/497 (1%)
 Frame = -1

Query: 1786 PPLENQEPDTKKLKMXXXXXXXXXXXXXXXXTVDGGAAPIKPARLKRRKVALFFAYCGVG 1607
            PP   QEPD K+LKM                         K  R KRRK+A+FFAYCGVG
Sbjct: 18   PPPTTQEPDPKRLKMSTTTTSDDEETASATNGT-------KKQRYKRRKIAIFFAYCGVG 70

Query: 1606 YQGMQKNPGAKTIEGELEEALYQAGAVPESDRGQSRKYDWARSARTDKGVSAVGQVVSGR 1427
            YQGMQKNPGAKTIEG+LEEAL+ +GAVPE DRG  ++YDWARSARTDKGVSAVGQVVSGR
Sbjct: 71   YQGMQKNPGAKTIEGDLEEALFHSGAVPEQDRGNPKRYDWARSARTDKGVSAVGQVVSGR 130

Query: 1426 FYVDPPGFVERLNSKLPDQIRIFGYKRVTGSFHAKKFCDRRRYMYLLPVFALDSSCHRDR 1247
            FY+DPPG VERLN  LP QIRIFGYKRVT SF++KKFCDRRRY+YL+PVFALD SCHRDR
Sbjct: 131  FYIDPPGLVERLNRILPAQIRIFGYKRVTASFNSKKFCDRRRYVYLIPVFALDPSCHRDR 190

Query: 1246 ESVVASLGSGNDLVKCLECSERGRKVFGVMGKRAFDDLKNEKEGLDIESGSLSNNTVEKE 1067
            ESV+ASLGSGN+LVKCLECSERGRKV GVMGKR+F     E +   + S   SNN     
Sbjct: 191  ESVLASLGSGNELVKCLECSERGRKVAGVMGKRSF-----EAKSTIVHSDVSSNNG---- 241

Query: 1066 EIENGVSVNXXXXXXXXXXXXXGDVGNGFGVAE--------VKKSEFCYGDKERERFNRI 911
              E+G  +                V N F   +        +++  FCYG++E+  FNRI
Sbjct: 242  --ESGNVIKEHNLTSELEEVTDSSVQNEFTEVDKVNVEKIPLEERRFCYGEEEKGLFNRI 299

Query: 910  LKYYEGTHNFHNFTTRTKAEDPSAHRYIISFDADSTVVVDGIEFVKCEVVGQSFMLHQIR 731
            LK+Y G+HNFHNFTTRTKAEDPSA RYI+SF A++ V V+GI+FVKCEVVGQSFMLHQIR
Sbjct: 300  LKHYVGSHNFHNFTTRTKAEDPSARRYIVSFHANTVVNVEGIDFVKCEVVGQSFMLHQIR 359

Query: 730  KMIGLAVAIMRDCAPESLIETAFRKDVNINVPMAPEVGLYLDECFFYSYNNKWEDSHEEV 551
            KMIG+AVA+MR+CAPESLIETA RKDV+INVP APEVGLYLDEC F SYN KW+DSHEE+
Sbjct: 360  KMIGMAVAVMRNCAPESLIETALRKDVSINVPTAPEVGLYLDECLFASYNQKWKDSHEEL 419

Query: 550  SMKAYAEEAEEFKMKYIFSHIASAEHKDGAVALWLHSLNYRNYPDLHWSDCKAENIEVKD 371
            SMKAY EEAEEFKMK+I+SHIAS E ++G VALWLHSLN+RNYPDL    C  E IE   
Sbjct: 420  SMKAYEEEAEEFKMKFIYSHIASTEREEGVVALWLHSLNHRNYPDLR--GCNVEMIEGMS 477

Query: 370  LQEGSNDEVNTIKTVEV 320
            L+   N +    K+  V
Sbjct: 478  LKVDDNTDNTDAKSASV 494


>XP_017985136.1 PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Theobroma
            cacao] XP_007010013.2 PREDICTED: tRNA pseudouridine
            synthase A, mitochondrial [Theobroma cacao]
          Length = 507

 Score =  614 bits (1583), Expect = 0.0
 Identities = 319/510 (62%), Positives = 375/510 (73%), Gaps = 10/510 (1%)
 Frame = -1

Query: 1819 PLKPTMEVHSSPPL---ENQEPDTKKLKMXXXXXXXXXXXXXXXXTVDGGAAPIKPARLK 1649
            P  P  ++  SPP      QEPD K+LKM                         K  R K
Sbjct: 4    PDTPDTKIAKSPPPLPPTTQEPDPKRLKMSTTTTSDDEETASATNGT-------KKQRYK 56

Query: 1648 RRKVALFFAYCGVGYQGMQKNPGAKTIEGELEEALYQAGAVPESDRGQSRKYDWARSART 1469
            RRK+A+FFAYCGVGYQGMQKNPGAKTIEG+LEEAL+ +GAVPE DRG  ++YDWARSART
Sbjct: 57   RRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFHSGAVPEQDRGNPKRYDWARSART 116

Query: 1468 DKGVSAVGQVVSGRFYVDPPGFVERLNSKLPDQIRIFGYKRVTGSFHAKKFCDRRRYMYL 1289
            DKGVSAVGQVVSGRFY+DPPG VERLN  LP QIRIFGYKRVT SF++KKFCDRRRY+YL
Sbjct: 117  DKGVSAVGQVVSGRFYIDPPGLVERLNRILPAQIRIFGYKRVTASFNSKKFCDRRRYVYL 176

Query: 1288 LPVFALDSSCHRDRESVVASLGSGNDLVKCLECSERGRKVFGVMGKRAFDD----LKNEK 1121
            +PVFALD SCHRDRESV+ASLGSGN+LVKCLECSERGRKV GVMGKR+F+     ++++ 
Sbjct: 177  IPVFALDPSCHRDRESVLASLGSGNELVKCLECSERGRKVAGVMGKRSFEAKSTIVQSDV 236

Query: 1120 EGLDIESGSL---SNNTVEKEEIENGVSVNXXXXXXXXXXXXXGDVGNGFGVAEVKKSEF 950
               + ESG++    N T E EE+ +    N                        +++  F
Sbjct: 237  SSNNGESGNVIKEHNLTSELEEVTDSSVQNEVTEVDKVNVEK----------IPLEERRF 286

Query: 949  CYGDKERERFNRILKYYEGTHNFHNFTTRTKAEDPSAHRYIISFDADSTVVVDGIEFVKC 770
            CYG++E+ RFNRILK+Y G+HNFHNFTTRTKAEDPSA RYI+SF A++ V V+GI+FVKC
Sbjct: 287  CYGEEEKGRFNRILKHYVGSHNFHNFTTRTKAEDPSARRYIVSFHANTVVNVEGIDFVKC 346

Query: 769  EVVGQSFMLHQIRKMIGLAVAIMRDCAPESLIETAFRKDVNINVPMAPEVGLYLDECFFY 590
            EVVGQSFMLHQIRKMIG+AVA+MR+CA ESLIETA RKDV+INVP APEVGLYLDEC F 
Sbjct: 347  EVVGQSFMLHQIRKMIGMAVAVMRNCASESLIETALRKDVSINVPTAPEVGLYLDECLFA 406

Query: 589  SYNNKWEDSHEEVSMKAYAEEAEEFKMKYIFSHIASAEHKDGAVALWLHSLNYRNYPDLH 410
            SYN KW+DSHEE+SMKAY EEAEEFKMK+I+SHIAS E ++G VALWLHSLN+RNYPDL 
Sbjct: 407  SYNQKWKDSHEELSMKAYEEEAEEFKMKFIYSHIASTEREEGVVALWLHSLNHRNYPDLR 466

Query: 409  WSDCKAENIEVKDLQEGSNDEVNTIKTVEV 320
               C  E IE   L+  +N +    K+  V
Sbjct: 467  --GCNVEMIEGMSLKVDNNTDNTDAKSASV 494


>XP_002307759.2 hypothetical protein POPTR_0005s26830g [Populus trichocarpa]
            EEE94755.2 hypothetical protein POPTR_0005s26830g
            [Populus trichocarpa]
          Length = 497

 Score =  612 bits (1579), Expect = 0.0
 Identities = 321/490 (65%), Positives = 371/490 (75%), Gaps = 10/490 (2%)
 Frame = -1

Query: 1810 PTMEVHSSPPLENQEPDTKKLKMXXXXXXXXXXXXXXXXTVDGGAAPIKPARLKRRKVAL 1631
            P  +  +SPP + QEPD K+ KM                   G    IK  R KRRK+A+
Sbjct: 4    PDSKTTTSPPRQ-QEPDLKRPKMSTTTSEDEDAATT----TPGDDTTIKKQRYKRRKIAI 58

Query: 1630 FFAYCGVGYQGMQKNPGAKTIEGELEEALYQAGAVPESDRGQSRKYDWARSARTDKGVSA 1451
            F  YCGVGYQGMQKNPGAKTIEG+LEEAL+ AGAVPE DRG  ++YDWARSARTDKGVSA
Sbjct: 59   FLTYCGVGYQGMQKNPGAKTIEGDLEEALFHAGAVPEHDRGIPKRYDWARSARTDKGVSA 118

Query: 1450 VGQVVSGRFYVDPPGFVERLNSKLPDQIRIFGYKRVTGSFHAKKFCDRRRYMYLLPVFAL 1271
            VGQVVSGRFY+DPPG VERL+S L  QIRIFGYKRVTGSF+AKKFCDRRRY+YL+PVFAL
Sbjct: 119  VGQVVSGRFYIDPPGLVERLHSNLSPQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFAL 178

Query: 1270 DSSCHRDRESVVASLGSGNDLVKCLECSERGRKVFGVMGKRAFDDLKNEKEGLDIESGSL 1091
            +   HRDRESV+ASLGSG++LVKCL+CSERGRKV G +GKR+F+  K++    +I S   
Sbjct: 179  NPCSHRDRESVLASLGSGSELVKCLQCSERGRKVVGAVGKRSFES-KSDVSPTEIWSND- 236

Query: 1090 SNNTVEKEEIENGVSV---------NXXXXXXXXXXXXXGDVGNGFGVAE-VKKSEFCYG 941
              +T  K EI+  VS+         N             GD  N     E +K S FCYG
Sbjct: 237  -KDTTLKSEIKEEVSISSNSEDANANPEIKDEIMVSIENGDDKNTKSEEEAIKGSGFCYG 295

Query: 940  DKERERFNRILKYYEGTHNFHNFTTRTKAEDPSAHRYIISFDADSTVVVDGIEFVKCEVV 761
            +KE+ERFNRIL YY G+HNFHNFTTRTKAEDPSA RYIISFDA +TV V+GIEFVKCEVV
Sbjct: 296  EKEKERFNRILNYYLGSHNFHNFTTRTKAEDPSAQRYIISFDAKTTVAVEGIEFVKCEVV 355

Query: 760  GQSFMLHQIRKMIGLAVAIMRDCAPESLIETAFRKDVNINVPMAPEVGLYLDECFFYSYN 581
            GQSFMLHQIRKMIG+AVAIMR+CA ESLI+TA +K+VNINVP APEVGLYLDECFF SYN
Sbjct: 356  GQSFMLHQIRKMIGVAVAIMRNCASESLIQTALQKNVNINVPTAPEVGLYLDECFFTSYN 415

Query: 580  NKWEDSHEEVSMKAYAEEAEEFKMKYIFSHIASAEHKDGAVALWLHSLNYRNYPDLHWSD 401
             KW+DSHEE+SMK Y EEAEEFKMK+I+SHIA+ EHK+G+VALWLHSLN+RNYPDL   D
Sbjct: 416  QKWKDSHEELSMKDYEEEAEEFKMKHIYSHIATTEHKEGSVALWLHSLNHRNYPDLRACD 475

Query: 400  CKAENIEVKD 371
               +NI  +D
Sbjct: 476  -NGDNITSED 484


>XP_016568306.1 PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Capsicum
            annuum]
          Length = 599

 Score =  615 bits (1585), Expect = 0.0
 Identities = 316/501 (63%), Positives = 372/501 (74%)
 Frame = -1

Query: 1771 QEPDTKKLKMXXXXXXXXXXXXXXXXTVDGGAAPIKPARLKRRKVALFFAYCGVGYQGMQ 1592
            +EP+ KK KM                    GAAP +  R KRRK+A+FFAYCGVGYQGMQ
Sbjct: 13   EEPEPKKQKMSITSDDEEEYDASAADGAGDGAAPARKPRYKRRKIAIFFAYCGVGYQGMQ 72

Query: 1591 KNPGAKTIEGELEEALYQAGAVPESDRGQSRKYDWARSARTDKGVSAVGQVVSGRFYVDP 1412
            KNPGAKTIEG+LEEALYQAG VP+ D+ Q R+YDWARSARTDKGVSAVGQVVSGRFYVDP
Sbjct: 73   KNPGAKTIEGDLEEALYQAGGVPDHDKCQPRRYDWARSARTDKGVSAVGQVVSGRFYVDP 132

Query: 1411 PGFVERLNSKLPDQIRIFGYKRVTGSFHAKKFCDRRRYMYLLPVFALDSSCHRDRESVVA 1232
            PGFV+RLNS L  QIRIFG+KR T +F+AKKFCD+RRY+YL+PVFALD   HRDRESV+A
Sbjct: 133  PGFVDRLNSILAPQIRIFGFKRTTNAFNAKKFCDKRRYVYLVPVFALDPCAHRDRESVLA 192

Query: 1231 SLGSGNDLVKCLECSERGRKVFGVMGKRAFDDLKNEKEGLDIESGSLSNNTVEKEEIENG 1052
            SLGSGN+LVKCL CSERGRKV G MGKR +D     K  + +++ +   N V    IENG
Sbjct: 193  SLGSGNELVKCLHCSERGRKVIGAMGKRVYDP--KTKSVIVVDAPTSEGNAV----IENG 246

Query: 1051 VSVNXXXXXXXXXXXXXGDVGNGFGVAEVKKSEFCYGDKERERFNRILKYYEGTHNFHNF 872
             S++              +         V++S F YG+KE+ERFNRILKYYEGTHNFHNF
Sbjct: 247  DSLSENVEEMNDENAKVVE-------ERVQESVFSYGEKEKERFNRILKYYEGTHNFHNF 299

Query: 871  TTRTKAEDPSAHRYIISFDADSTVVVDGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRDC 692
            TTRTKA+DP+A RYIISF+A++ V V GIEFVKCEV+GQSFMLHQIRKMIGLAVAIMR+C
Sbjct: 300  TTRTKADDPAAKRYIISFNANTVVNVQGIEFVKCEVIGQSFMLHQIRKMIGLAVAIMRNC 359

Query: 691  APESLIETAFRKDVNINVPMAPEVGLYLDECFFYSYNNKWEDSHEEVSMKAYAEEAEEFK 512
            APESLI TAFR+DVNINVPMAPEVGLYLDECFF SYN+KW+D+HEEVS+ AY+E AEEFK
Sbjct: 360  APESLIVTAFRRDVNINVPMAPEVGLYLDECFFTSYNSKWKDTHEEVSLTAYSEMAEEFK 419

Query: 511  MKYIFSHIASAEHKDGAVALWLHSLNYRNYPDLHWSDCKAENIEVKDLQEGSNDEVNTIK 332
            MK+I+SHIA  EHK+G + +WLHSLN+RNYPDL             DL + + D    ++
Sbjct: 420  MKHIYSHIALTEHKEGTMGVWLHSLNHRNYPDL----------RAVDLGKPAGDGSEVVE 469

Query: 331  TVEVTNVAEGVDV*GKNHTMD 269
             VE T V  G+ V     + D
Sbjct: 470  VVE-TAVDAGLGVVNNGESTD 489


>XP_004238400.1 PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Solanum
            lycopersicum]
          Length = 598

 Score =  612 bits (1579), Expect = 0.0
 Identities = 310/469 (66%), Positives = 363/469 (77%), Gaps = 1/469 (0%)
 Frame = -1

Query: 1804 MEVHSSPPLENQEPDTKKLKMXXXXXXXXXXXXXXXXTVDGGAAPIKPARLKRRKVALFF 1625
            ME    P    +EP  KK KM                    G+AP +  R KRRKVA+FF
Sbjct: 1    MEKEPVPSSITEEPQPKKQKMSTTTTSDEEYAAG----AGDGSAPERKPRYKRRKVAIFF 56

Query: 1624 AYCGVGYQGMQKNPGAKTIEGELEEALYQAGAVPESDRGQSRKYDWARSARTDKGVSAVG 1445
            AYCGVGYQGMQKNPGAKTIEG+LEEALYQAG VP+ D+ Q RKY+WARSARTDKGVSAVG
Sbjct: 57   AYCGVGYQGMQKNPGAKTIEGDLEEALYQAGGVPDHDKCQPRKYEWARSARTDKGVSAVG 116

Query: 1444 QVVSGRFYVDPPGFVERLNSKLPDQIRIFGYKRVTGSFHAKKFCDRRRYMYLLPVFALDS 1265
            QVVSGRFYVDPPGF++RLNS L  QIRIFG+KRVT +F AKKFCD+RRY+YL+PVFALD 
Sbjct: 117  QVVSGRFYVDPPGFIDRLNSILVPQIRIFGFKRVTNAFSAKKFCDKRRYVYLVPVFALDP 176

Query: 1264 SCHRDRESVVASLGSGNDLVKCLECSERGRKVFGVMGKRAFDDLKNEKEGLDIESGSLSN 1085
              HRDRESV+ASLGSG +LVKCL C ERGRKV GVMG+R FD +      +D    + ++
Sbjct: 177  YAHRDRESVLASLGSGKELVKCLNCPERGRKVAGVMGRRVFDPITQSVIIVDAPVVTAND 236

Query: 1084 NTVEKEEI-ENGVSVNXXXXXXXXXXXXXGDVGNGFGVAEVKKSEFCYGDKERERFNRIL 908
             T +   I EN  S++              +  N     +V++S FCYG+KE+ERFNRIL
Sbjct: 237  PTTDTNMIIENEASLSEKVEERIDVVERSDE--NAKKEEQVEESVFCYGEKEKERFNRIL 294

Query: 907  KYYEGTHNFHNFTTRTKAEDPSAHRYIISFDADSTVVVDGIEFVKCEVVGQSFMLHQIRK 728
            KY+EGTHNFHNFTTRTKA+DP+A R+IISF+A++ V VDGI+FVKCEV+GQSFMLHQIRK
Sbjct: 295  KYFEGTHNFHNFTTRTKADDPAAKRFIISFNANTVVNVDGIDFVKCEVIGQSFMLHQIRK 354

Query: 727  MIGLAVAIMRDCAPESLIETAFRKDVNINVPMAPEVGLYLDECFFYSYNNKWEDSHEEVS 548
            MIGLAVAIMR+CAPESLI TAFR+DVNINVPMAPEVGLYLDECFF SYN+KW+D+HEEVS
Sbjct: 355  MIGLAVAIMRNCAPESLIVTAFRRDVNINVPMAPEVGLYLDECFFTSYNSKWKDTHEEVS 414

Query: 547  MKAYAEEAEEFKMKYIFSHIASAEHKDGAVALWLHSLNYRNYPDLHWSD 401
            +KAY EEAEEFK+KYI+SHIAS E K+G +A+WLHSLN+RNYPDL   D
Sbjct: 415  LKAYLEEAEEFKVKYIYSHIASTEQKEGTMAVWLHSLNHRNYPDLRAVD 463


>KNA14783.1 hypothetical protein SOVF_104360 [Spinacia oleracea]
          Length = 633

 Score =  613 bits (1582), Expect = 0.0
 Identities = 328/544 (60%), Positives = 384/544 (70%), Gaps = 37/544 (6%)
 Frame = -1

Query: 1825 ISPLKPTMEVHSSPPL-ENQEPDTKKLKMXXXXXXXXXXXXXXXXTVDGGAAPIKPARLK 1649
            +S L P       P L E Q+P  KK KM                         KP RLK
Sbjct: 14   LSSLPPPPPPPPPPELPEQQQPPLKKPKMSSTTATSDEETAR------------KPPRLK 61

Query: 1648 RRKVALFFAYCGVGYQGMQKNPGAKTIEGELEEALYQAGAVPESDRGQSRKYDWARSART 1469
             RKVA+FFAYCGVGYQGMQKNPGAKTIEG+LEEAL+ AGAV E+DRG S+++DWARSART
Sbjct: 62   LRKVAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFFAGAVSEADRGISKRFDWARSART 121

Query: 1468 DKGVSAVGQVVSGRFYVDPPGFVERLNSKLPDQIRIFGYKRVTGSFHAKKFCDRRRYMYL 1289
            DKGVSAVGQVVSGRFYVDPPGFV+RLNS LP QIRIFGYKRVT SF+AKKFCDRRRY+YL
Sbjct: 122  DKGVSAVGQVVSGRFYVDPPGFVQRLNSNLPPQIRIFGYKRVTPSFNAKKFCDRRRYVYL 181

Query: 1288 LPVFALDSSCHRDRESVVASLGSGNDLVKCLECSERGRKVFGVMG-KRAFDDLKNEKEGL 1112
            LPVFALD SCHRDRESV+ASLGSGN+LVKC  CSERGRKV G+MG KR +++    + G+
Sbjct: 182  LPVFALDPSCHRDRESVLASLGSGNELVKCFGCSERGRKVIGLMGNKRDWENTGLIQSGI 241

Query: 1111 DIESGSLSNNTVEKEEIENGVS--------VNXXXXXXXXXXXXXGDVG----------- 989
               +G    N+ EKE IE  V         V+             GD             
Sbjct: 242  SSNTGDALLNSGEKEGIEGDVVLGNCDAGVVDCDVLVQSGILSNTGDASLVSDEKEKNVK 301

Query: 988  ----------NGFGVA------EVKKSEFCYGDKERERFNRILKYYEGTHNFHNFTTRTK 857
                      NG  V+      EV  SEF YG++ER+RFNRILKYYEGTHNFHNFTTRTK
Sbjct: 302  EDCNVSLENTNGVDVSMMASDSEVNASEFKYGEEERKRFNRILKYYEGTHNFHNFTTRTK 361

Query: 856  AEDPSAHRYIISFDADSTVVVDGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRDCAPESL 677
            AEDPSA RYI+SF+A++T+ ++GIEFVKCEVVGQSFMLHQIRK+IG+AV++MRD  PES+
Sbjct: 362  AEDPSAKRYIVSFEANTTLTIEGIEFVKCEVVGQSFMLHQIRKLIGMAVSVMRDFVPESI 421

Query: 676  IETAFRKDVNINVPMAPEVGLYLDECFFYSYNNKWEDSHEEVSMKAYAEEAEEFKMKYIF 497
             E AF +D  INVP APEVGLYLDECFF SYNNKW  +HEEVSMKAYAEEAEEFK+KYI+
Sbjct: 422  YERAFDQDFRINVPTAPEVGLYLDECFFTSYNNKWNSTHEEVSMKAYAEEAEEFKLKYIY 481

Query: 496  SHIASAEHKDGAVALWLHSLNYRNYPDLHWSDCKAENIEVKDLQEGSNDEVNTIKTVEVT 317
            SHIA+ EHK+G+VA+WLHSLN+RNYPD   S+ + E +   ++Q   +DEV  +   EV 
Sbjct: 482  SHIANTEHKEGSVAVWLHSLNHRNYPDFRPSNGEVEKVGNDEVQRVGDDEVQKVGNDEVQ 541

Query: 316  NVAE 305
             V +
Sbjct: 542  KVGD 545


>XP_015074162.1 PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Solanum
            pennellii]
          Length = 605

 Score =  612 bits (1579), Expect = 0.0
 Identities = 311/472 (65%), Positives = 364/472 (77%), Gaps = 4/472 (0%)
 Frame = -1

Query: 1804 MEVHSSPPLENQEPDTKKLKMXXXXXXXXXXXXXXXXTVDG---GAAPIKPARLKRRKVA 1634
            ME    P    +EP  KK KM                   G   G+AP +  R KRRKVA
Sbjct: 1    MEKEPVPSSITEEPQPKKQKMSTTTTSDDEEYAAGAAAGAGAGDGSAPERKPRYKRRKVA 60

Query: 1633 LFFAYCGVGYQGMQKNPGAKTIEGELEEALYQAGAVPESDRGQSRKYDWARSARTDKGVS 1454
            +FFAYCGVGYQGMQKNPGAKTIEG+LEEALYQAG VP+ D+ Q RKY+WARSARTDKGVS
Sbjct: 61   IFFAYCGVGYQGMQKNPGAKTIEGDLEEALYQAGGVPDHDKCQPRKYEWARSARTDKGVS 120

Query: 1453 AVGQVVSGRFYVDPPGFVERLNSKLPDQIRIFGYKRVTGSFHAKKFCDRRRYMYLLPVFA 1274
            AVGQVVSGRFYVDPPGF++RLNS L  QIRIFG+KRVT +F AKKFCD+RRY+YL+PVFA
Sbjct: 121  AVGQVVSGRFYVDPPGFIDRLNSILVPQIRIFGFKRVTNAFSAKKFCDKRRYVYLVPVFA 180

Query: 1273 LDSSCHRDRESVVASLGSGNDLVKCLECSERGRKVFGVMGKRAFDDLKNEKEGLDIESGS 1094
            LD   HRDRESV+ASLGSG +LVKCL C ERGRKV GVMG+R FD +      +D    +
Sbjct: 181  LDPYAHRDRESVLASLGSGKELVKCLNCPERGRKVAGVMGRRVFDPITQSVIIVDAPVVN 240

Query: 1093 LSNNTVEKEEI-ENGVSVNXXXXXXXXXXXXXGDVGNGFGVAEVKKSEFCYGDKERERFN 917
             ++ T +   I EN  S++              +  N     +V++S FCYG+KE+ERFN
Sbjct: 241  ANDPTTDTNMIIENEASLSEKVEERIDEVERSDE--NAKKEEQVEESVFCYGEKEKERFN 298

Query: 916  RILKYYEGTHNFHNFTTRTKAEDPSAHRYIISFDADSTVVVDGIEFVKCEVVGQSFMLHQ 737
            RILKY+EGTHNFHNFTTRTKA+DP+A R+IISF+A++ V VDGI+FVKCEV+GQSFMLHQ
Sbjct: 299  RILKYFEGTHNFHNFTTRTKADDPAAKRFIISFNANTVVNVDGIDFVKCEVIGQSFMLHQ 358

Query: 736  IRKMIGLAVAIMRDCAPESLIETAFRKDVNINVPMAPEVGLYLDECFFYSYNNKWEDSHE 557
            IRKMIGLAVAIMR+CAPESLI TAFR+DVNINVPMAPEVGLYLDECFF SYN+KW+D+HE
Sbjct: 359  IRKMIGLAVAIMRNCAPESLIVTAFRRDVNINVPMAPEVGLYLDECFFTSYNSKWKDTHE 418

Query: 556  EVSMKAYAEEAEEFKMKYIFSHIASAEHKDGAVALWLHSLNYRNYPDLHWSD 401
            EVS+KAY EEAEEFK+KYI+SHIAS E K+G +A+WLHSLN+RNYPDL   D
Sbjct: 419  EVSLKAYLEEAEEFKVKYIYSHIASTEQKEGTMAVWLHSLNHRNYPDLRAVD 470


>XP_018812063.1 PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Juglans
            regia]
          Length = 525

 Score =  605 bits (1561), Expect = 0.0
 Identities = 320/497 (64%), Positives = 361/497 (72%), Gaps = 31/497 (6%)
 Frame = -1

Query: 1810 PTMEVHSSPP------LENQEPDTKKLKMXXXXXXXXXXXXXXXXTVDGGAAPI--KPAR 1655
            P  +   SPP       E  EP+ KKLKM                     AAP   K  R
Sbjct: 4    PDSKSDKSPPPTHKLETEQSEPEPKKLKMSTTTTSDDEDTSTAT------AAPETNKKQR 57

Query: 1654 LKRRKVALFFAYCGVGYQGMQKNPGAKTIEGELEEALYQAGAVPESDRGQSRKYDWARSA 1475
             KRRK+A+FFAYCGVGYQGMQKNPGAKTIE +LEEAL+ +GAVPE DR   ++YDWARSA
Sbjct: 58   YKRRKIAIFFAYCGVGYQGMQKNPGAKTIESDLEEALFLSGAVPEQDRNNPKRYDWARSA 117

Query: 1474 RTDKGVSAVGQVVSGRFYVDPPGFVERLNSKLPDQIRIFGYKRVTGSFHAKKFCDRRRYM 1295
            RTDKGVSAVGQVVSGRFY+DPPG VERLNS L  QIRIFGYKRVT SF+AKKFCDRRRY+
Sbjct: 118  RTDKGVSAVGQVVSGRFYIDPPGLVERLNSNLSSQIRIFGYKRVTASFNAKKFCDRRRYV 177

Query: 1294 YLLPVFALDSSCHRDRESVVASLGSGNDLVKCLECSERGRKVFGVMGKRAFDDLKNEKEG 1115
            YL+PVFALD S H DRESV+ASLGSGN+LVKCLECSERGRKV G+MG+R F+     + G
Sbjct: 178  YLIPVFALDPSSHPDRESVLASLGSGNELVKCLECSERGRKVVGLMGRRIFESKGTVESG 237

Query: 1114 LDIESGSLSNNTVEKEE----IENGVS-------------VNXXXXXXXXXXXXXGDVGN 986
            +   SG     +  KEE    +ENG +             V+                 N
Sbjct: 238  ITSSSGDAIEESNIKEESRAYLENGENHKFTSESMEEAKVVDDSRASEIAAVEAEIPAQN 297

Query: 985  GFGVAEVKKSE------FCYGDKERERFNRILKYYEGTHNFHNFTTRTKAEDPSAHRYII 824
               V +V   E      F YG+KERE FNRILKYY GTHNFHNFTTRTKAEDP+A R+I+
Sbjct: 298  EDTVEKVNLQEGAKGGGFFYGEKERESFNRILKYYVGTHNFHNFTTRTKAEDPAAQRFIV 357

Query: 823  SFDADSTVVVDGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRDCAPESLIETAFRKDVNI 644
            SF+A++TV V G+EFVKCEVVGQSFMLHQIRKMIGLAVAIMRDCAPESLIE A +KDVNI
Sbjct: 358  SFNANTTVTVQGMEFVKCEVVGQSFMLHQIRKMIGLAVAIMRDCAPESLIEKALQKDVNI 417

Query: 643  NVPMAPEVGLYLDECFFYSYNNKWEDSHEEVSMKAYAEEAEEFKMKYIFSHIASAEHKDG 464
            NVP APEVGLYL+ECFF SYN KW+DSHEEVSMKAY +EAE+FKMK+I+SHIAS EHK+G
Sbjct: 418  NVPTAPEVGLYLEECFFTSYNQKWKDSHEEVSMKAYEQEAEDFKMKHIYSHIASTEHKEG 477

Query: 463  AVALWLHSLNYRNYPDL 413
            AVALWLHSLN RNYPDL
Sbjct: 478  AVALWLHSLNNRNYPDL 494


>XP_019453351.1 PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X1 [Lupinus angustifolius] OIW18622.1 hypothetical
            protein TanjilG_13374 [Lupinus angustifolius]
          Length = 506

 Score =  603 bits (1556), Expect = 0.0
 Identities = 318/483 (65%), Positives = 360/483 (74%), Gaps = 24/483 (4%)
 Frame = -1

Query: 1786 PPLENQEPDTKKLKMXXXXXXXXXXXXXXXXTVDGGAAPI--KPARLKRRKVALFFAYCG 1613
            P +  +EP+ KKLKM                  D G   +  +  R KRRK+A+FFAYCG
Sbjct: 19   PRVSAEEPEAKKLKMSTTTSD------------DEGCTTVTGRKIRYKRRKIAIFFAYCG 66

Query: 1612 VGYQGMQKNPGAKTIEGELEEALYQAGAVPESDRGQSRKYDWARSARTDKGVSAVGQVVS 1433
            VGYQGMQKNPGAKTIEG+LEEALY +GAVPE DRG   +YDWARSARTDKGVSAVGQVVS
Sbjct: 67   VGYQGMQKNPGAKTIEGDLEEALYASGAVPEHDRGIPNRYDWARSARTDKGVSAVGQVVS 126

Query: 1432 GRFYVDPPGFVERLNSKLPDQIRIFGYKRVTGSFHAKKFCDRRRYMYLLPVFALDSSCHR 1253
            GRFYVDPPGFV+RLNS L  QIRIFGYKRVTGS++AKKFCDRRRY+YL+PVFALD  C +
Sbjct: 127  GRFYVDPPGFVDRLNSNLSPQIRIFGYKRVTGSYNAKKFCDRRRYVYLIPVFALDPCCQQ 186

Query: 1252 DRESVVASLGSGNDLVKCLECSERGRKVFGVMGKRAFDDLKNEKEGLDIESGSLSN-NTV 1076
            DRESV+AS GS ++LVKCLE SERG KV G++G     DLK   E +D+E+   SN N  
Sbjct: 187  DRESVMASSGSESELVKCLESSERGHKVIGLVGN-VKSDLK--VEAVDVEAAISSNRNDA 243

Query: 1075 EKEEIENGVSV---NXXXXXXXXXXXXXGDVG---NGFGV---------------AEVKK 959
               E+   V V   N              D G   NG  V                  K+
Sbjct: 244  LNSEVTEDVEVLVDNVNSKTDIETVIPDQDEGTPLNGGSVNTSTILEEEKVNGEERATKE 303

Query: 958  SEFCYGDKERERFNRILKYYEGTHNFHNFTTRTKAEDPSAHRYIISFDADSTVVVDGIEF 779
            S+F YG+KERERFNRILKYY GTHNFHNFTTRTKAEDP+A RYIISFDA +TV+VDG+EF
Sbjct: 304  SKFSYGEKERERFNRILKYYVGTHNFHNFTTRTKAEDPAAIRYIISFDASTTVLVDGMEF 363

Query: 778  VKCEVVGQSFMLHQIRKMIGLAVAIMRDCAPESLIETAFRKDVNINVPMAPEVGLYLDEC 599
            VKCEVVGQSFMLHQIRKM+GLAVA+MR+CAPESLI  A +KDVNI+VP APEVGLYLDEC
Sbjct: 364  VKCEVVGQSFMLHQIRKMMGLAVAVMRNCAPESLITNALQKDVNIHVPTAPEVGLYLDEC 423

Query: 598  FFYSYNNKWEDSHEEVSMKAYAEEAEEFKMKYIFSHIASAEHKDGAVALWLHSLNYRNYP 419
            FF SYN KW+DSHEE+SMK YA+EAEEFKMKYI+SHIAS EHKDG VALWLHSLN+RNYP
Sbjct: 424  FFTSYNQKWKDSHEELSMKEYAKEAEEFKMKYIYSHIASTEHKDGTVALWLHSLNHRNYP 483

Query: 418  DLH 410
            DLH
Sbjct: 484  DLH 486


>XP_004292926.1 PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
            [Fragaria vesca subsp. vesca]
          Length = 591

 Score =  605 bits (1561), Expect = 0.0
 Identities = 318/520 (61%), Positives = 374/520 (71%), Gaps = 19/520 (3%)
 Frame = -1

Query: 1813 KPTMEVHSSPPLENQEPDTKKLKMXXXXXXXXXXXXXXXXTVDGGAAPIKPARLKRRKVA 1634
            KPT      PP   Q+PD KKLKM                  +  AA  +  RLKRRKVA
Sbjct: 8    KPTRSPPPPPP--QQQPDPKKLKMSTTTTDD-----------EQTAATTQKQRLKRRKVA 54

Query: 1633 LFFAYCGVGYQGMQKNPGAKTIEGELEEALYQAGAVPESDRGQSRKYDWARSARTDKGVS 1454
            +FFAYCGVGYQGMQKNPGAKTIEG+LEEALY +GAVPE DR   ++YDWARSARTDKGVS
Sbjct: 55   IFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPEQDRSNPKRYDWARSARTDKGVS 114

Query: 1453 AVGQVVSGRFYVDPPGFVERLNSKLPDQIRIFGYKRVTGSFHAKKFCDRRRYMYLLPVFA 1274
            AVGQVVSGRFYVDPPGFV+RLNS L  QIRIFGYKRVT SF+AKKFCDRRRY+YL+PVFA
Sbjct: 115  AVGQVVSGRFYVDPPGFVDRLNSHLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFA 174

Query: 1273 LDSSCHRDRESVVASLGSGNDLVKCLECSERGRKVFGVMGKRAFDDLKNEKEGLDIESGS 1094
            LD S HRDRESV ASLGS  + VKCLECS+RGRKV G+MGKR +      + G    S S
Sbjct: 175  LDPSAHRDRESVKASLGSDEEFVKCLECSDRGRKVGGLMGKRTYQ----LRGGNSYNSES 230

Query: 1093 LSN-NTVEKEEIENGVSVNXXXXXXXXXXXXXGDVGNGFGVAEVKKSEFCYGDKERERFN 917
            ++  +T +  +I+N +                 +V  G   A V+ S FCYG+KE+ERFN
Sbjct: 231  VTEISTNDDMKIDNDIEGEDNVVVGNADMNSAEEVNGGEKKA-VEGSGFCYGEKEKERFN 289

Query: 916  RILKYYEGTHNFHNFTTRTKAEDPSAHRYIISFDADSTVVVDGIEFVKCEVVGQSFMLHQ 737
            RIL  Y+GTHNFHNFTTRTKAEDP+A RYIISF A++TV V+GIEFVKCEVVGQSFMLHQ
Sbjct: 290  RILSCYQGTHNFHNFTTRTKAEDPAAIRYIISFSANATVTVEGIEFVKCEVVGQSFMLHQ 349

Query: 736  IRKMIGLAVAIMRDCAPESLIETAFRKDVNINVPMAPEVGLYLDECFFYSYNNKWEDSHE 557
            IRK+IGLAVAIMR+CAPESL+E A +KDVN+NVP APEVGLYLDECFF SYN KW D+HE
Sbjct: 350  IRKLIGLAVAIMRNCAPESLLERALQKDVNVNVPTAPEVGLYLDECFFSSYNQKWGDTHE 409

Query: 556  EVSMKAYAEEAEEFKMKYIFSHIASAEHKDGAVALWLHSLNYRNYPDL------------ 413
            EVSMK Y  EAE FKMK+I++HI + EHK+G V LWLHSLN+RNYPDL            
Sbjct: 410  EVSMKGYEAEAEAFKMKHIYTHIGATEHKEGVVGLWLHSLNHRNYPDLGAENNGDTSNGK 469

Query: 412  ----HWSDCKAENIEVK--DLQEGSNDEVNTIKTVEVTNV 311
                  +D   + I  K  D+   +N + + +KT ++++V
Sbjct: 470  TAEISSTDNNGDTINCKTADISADNNGDTSNVKTADISSV 509


>XP_004507719.1 PREDICTED: tRNA pseudouridine synthase A, mitochondrial isoform X1
            [Cicer arietinum]
          Length = 505

 Score =  599 bits (1545), Expect = 0.0
 Identities = 315/491 (64%), Positives = 360/491 (73%), Gaps = 20/491 (4%)
 Frame = -1

Query: 1825 ISPLKPTMEVHSSPPLENQEPDTKKLKMXXXXXXXXXXXXXXXXTVDGGAAPIKPARLKR 1646
            +SPL PT       P+  +EP TKK KM                     AA     R KR
Sbjct: 11   LSPLPPT-------PVIAEEPQTKKAKMSTTTSDDEECT----------AAAGTKVRYKR 53

Query: 1645 RKVALFFAYCGVGYQGMQKNPGAKTIEGELEEALYQAGAVPESDRGQSRKYDWARSARTD 1466
            RKVA+ FAYCGVGYQGMQKNPGAKTIEGE+EEALY +GAVPE DRG S++YDWARSARTD
Sbjct: 54   RKVAILFAYCGVGYQGMQKNPGAKTIEGEIEEALYVSGAVPEQDRGMSKRYDWARSARTD 113

Query: 1465 KGVSAVGQVVSGRFYVDPPGFVERLNSKLPDQIRIFGYKRVTGSFHAKKFCDRRRYMYLL 1286
            KGVSAVGQVVSGRFY+DPPGFV+RLNS LP QIRIFGYKRVT SF AKKFCDRRRY+YL+
Sbjct: 114  KGVSAVGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGYKRVTASFSAKKFCDRRRYVYLI 173

Query: 1285 PVFALDSSCHRDRESVVASLGSGNDLVKCLECSERGRKVFGVMG--KRAFD----DLKNE 1124
            PVFALD  CHRDRE+V+ASLGS N+LVKCLECSERGRKV G++G  KR  +    D++  
Sbjct: 174  PVFALDPCCHRDRETVLASLGSENELVKCLECSERGRKVEGLVGNSKRNLELEAMDVETT 233

Query: 1123 KEGLDIESGSLSNNT----VEKEEIENGVSVNXXXXXXXXXXXXXGDVGNGFGVAE---- 968
             +G D  S   S N     V  E++ +  S               G   N   V E    
Sbjct: 234  DKGDDNRSNKESINDNEGKVSVEDVNSKTSFETVVSGQDEVSPLNGGSENNSAVLEEEKV 293

Query: 967  ------VKKSEFCYGDKERERFNRILKYYEGTHNFHNFTTRTKAEDPSAHRYIISFDADS 806
                   K+SEFCYG+KERERFN+ILK Y GTHNFHNFTTR K EDPSA R+IISFDA +
Sbjct: 294  NGEDTPAKRSEFCYGEKERERFNKILKSYVGTHNFHNFTTRIKPEDPSAKRFIISFDASN 353

Query: 805  TVVVDGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRDCAPESLIETAFRKDVNINVPMAP 626
            TVV++G+EFVKCE+VGQSFMLHQIRKM+GLAVAIMR+CAPESLIE A + DV+I VP AP
Sbjct: 354  TVVIEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQTDVSITVPTAP 413

Query: 625  EVGLYLDECFFYSYNNKWEDSHEEVSMKAYAEEAEEFKMKYIFSHIASAEHKDGAVALWL 446
            EVGLYLDECFF SYN KW+D+HEEVSMKAY +EAE+FKMK+I+SHIAS E K+G V LWL
Sbjct: 414  EVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMKFIYSHIASTEQKEGTVGLWL 473

Query: 445  HSLNYRNYPDL 413
            HSLN+RNY DL
Sbjct: 474  HSLNHRNYSDL 484