BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00006164
         (3147 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_009601448.1 PREDICTED: polyadenylation and cleavage factor ho...   706   0.0  
XP_016432499.1 PREDICTED: LOW QUALITY PROTEIN: polyadenylation a...   702   0.0  
XP_006342553.1 PREDICTED: polyadenylation and cleavage factor ho...   699   0.0  
CBI23183.3 unnamed protein product, partial [Vitis vinifera]          698   0.0  
XP_009601446.1 PREDICTED: polyadenylation and cleavage factor ho...   697   0.0  
CDO99723.1 unnamed protein product [Coffea canephora]                 696   0.0  
XP_017645981.1 PREDICTED: polyadenylation and cleavage factor ho...   695   0.0  
XP_015162085.1 PREDICTED: polyadenylation and cleavage factor ho...   693   0.0  
XP_004253131.1 PREDICTED: polyadenylation and cleavage factor ho...   693   0.0  
XP_016683609.1 PREDICTED: polyadenylation and cleavage factor ho...   693   0.0  
XP_009601447.1 PREDICTED: polyadenylation and cleavage factor ho...   692   0.0  
XP_012450328.1 PREDICTED: polyadenylation and cleavage factor ho...   692   0.0  
XP_019257117.1 PREDICTED: polyadenylation and cleavage factor ho...   691   0.0  
XP_016550983.1 PREDICTED: polyadenylation and cleavage factor ho...   691   0.0  
XP_019195955.1 PREDICTED: polyadenylation and cleavage factor ho...   689   0.0  
XP_019195956.1 PREDICTED: polyadenylation and cleavage factor ho...   687   0.0  
XP_015061482.1 PREDICTED: polyadenylation and cleavage factor ho...   687   0.0  
XP_019067109.1 PREDICTED: polyadenylation and cleavage factor ho...   687   0.0  
XP_016753657.1 PREDICTED: polyadenylation and cleavage factor ho...   686   0.0  
XP_019173654.1 PREDICTED: polyadenylation and cleavage factor ho...   682   0.0  

>XP_009601448.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X3
            [Nicotiana tomentosiformis]
          Length = 980

 Score =  706 bits (1823), Expect = 0.0
 Identities = 448/1005 (44%), Positives = 566/1005 (56%), Gaps = 107/1005 (10%)
 Frame = -1

Query: 2886 MAISSKXXXXXTISERFREMVKEREEELRVSG-------DDVGL---SGDEIVRLYDILL 2737
            +A   K     +I ERFR  +KEREEELR S        DDV +   + DEIVRLY++ L
Sbjct: 19   VAAPPKPLPSPSIIERFRAALKEREEELRASSMPVVDDDDDVIVLPPTMDEIVRLYELFL 78

Query: 2736 SELSVNSKPIITDLTIIAGEQRMYGAGIADAICCRIIEVPVEQKLPSLYLLDSIVKNIGR 2557
            S+L+ NSKP+ITDLTIIAGEQR +G GIADAIC RI+EVPVEQKLPSLYLLDSIVKNIGR
Sbjct: 79   SDLTFNSKPVITDLTIIAGEQREHGQGIADAICSRILEVPVEQKLPSLYLLDSIVKNIGR 138

Query: 2556 EYIKYFSARLPEVFCDAYKQVHPNVHPAMRHLFGTWSTVFPLSVLRKIESHLQFXXXXXN 2377
            +Y+++FSA LPEVFC+AY+QVHP++HPAMRHLFGTWSTVFP  VLRKIE+ LQF      
Sbjct: 139  DYVRHFSAHLPEVFCEAYRQVHPSMHPAMRHLFGTWSTVFPAPVLRKIETRLQFSQPGPQ 198

Query: 2376 QSLALPPLRASESPRPAHGIHINPKYLEARRQFVNETADS-SVQPPRGVSTISKLSNQNH 2200
            QS  L   RASESPRP HGIH+NPKYLEARRQ  + T DS  V+ P G  +    + Q  
Sbjct: 199  QSSGLTSSRASESPRPTHGIHVNPKYLEARRQLGHSTIDSVRVENPAGHISSDLEAKQVL 258

Query: 2199 STDYEEFISDGDTDVXXXXXXXXXXXXXXXXXXXXXLPPTSSGRIEMSASLYGVGRVGFS 2020
            ST                                       + +   S+S Y VG     
Sbjct: 259  ST---------------------------------------ASKNARSSSPYRVGPARSL 279

Query: 2019 SPSLEHRQMDNSP---GRGASPLDSGIDYRTGGFLGSTARTDDWKRICVPGDSKNHVKTA 1849
            SP+L+   +DNS      GASP  S +DY      G     ++W+RI +P D+       
Sbjct: 280  SPTLDEFAVDNSAIGLREGASPSHSALDYGLNRVRGRDDERNEWQRI-LPDDANQQPDIP 338

Query: 1848 VR--LNNGVDVDRTRALIDAYGVDKRTDMM--KHPGVEEMQVNGIGTEPTM-AWQNSEEE 1684
            V+  LN   D+   RALIDAYG+D+R  ++  +   +    +N +G    +  WQN+EEE
Sbjct: 339  VKYGLNRDFDLQGPRALIDAYGIDEREKLVNQRQRKMGNAAMNSLGERVAVKTWQNTEEE 398

Query: 1683 EFQWENMSPTLADHGRKDVFXXXXXXXXSFR-----NTASVPPHL---RQDWPNRPQFPA 1528
            EF WE+MSPTLAD    +            R     ++  V P +   R+ W NR Q+ +
Sbjct: 399  EFNWEDMSPTLADQSPFNDLSTSVRHPQGIRTRPGLDSQHVVPLVSDPRRSWSNRGQYSS 458

Query: 1527 VNGSSIVDVPSSTDG-----------------------LENTVYAIHRVPTHIQDSST-- 1423
            V+ SS+ DV SS  G                       L   V  +H+    ++ S    
Sbjct: 459  VHDSSLDDVHSSGRGARNKITGYCDETSLISGSPYLQKLPENVPLLHQRHLKVEGSGIVT 518

Query: 1422 ----HQF--NATKVGNNARMPF-------------------QGSAIL---PPNVEQKPSS 1327
                H    N    G+  R P+                    G A +   PP     P S
Sbjct: 519  GEPKHPLISNLVADGHTWRPPYIPPRMNPTFESSVQDIRAVTGRAPIVPWPPTDVHNPQS 578

Query: 1326 IGYSPD-LNTQNQGQPFMSRGGSHA-------RPMLQAYQNVNSSS--------FPDHNL 1195
            +   P  L  Q+   PF  + GS++       +P+L   Q  NS S        FP  + 
Sbjct: 579  LTSKPFVLPHQHIRSPFEVKNGSNSVANHNLDKPVLPGQQIDNSKSNSYIKFPQFPSQHP 638

Query: 1194 NNTESILQNPMLPFSGQQLGPIPFNQSLVHTAMLPPHSLPHDMQ------HHAAPHSVVA 1033
             +  + LQNP    S +    + F+Q + H   +P  SLP          +   P    +
Sbjct: 639  ASFSASLQNPEQVASAES--QLLFSQRM-HQTTVPSASLPASNHFLLPPIYGYNPQGPGS 695

Query: 1032 SVGTILPNLYM--QVRMPNLNAPNASTXXXXXXXXXXXXXXG--ASHVLPIPQP-SYSAP 868
            SVGT+LP      QV +P +N PN S+                 +S   P  Q      P
Sbjct: 696  SVGTLLPLPVSGPQVSLPLVNIPNTSSQFSSGALPPLPRGPLPMSSQFTPTSQNLGQVTP 755

Query: 867  NPPVGGNFSNLFNSLMAQGVISLNQTSAKEDAVGLEFNPDLLKVRHESAVTALYSDLPRQ 688
            NPP GG FS+L +SLMAQG+ISL   +  +D+VGL+FNPDLLKVRH+SAVTALY+DLPRQ
Sbjct: 756  NPPAGG-FSSLISSLMAQGLISLTNEAPPQDSVGLDFNPDLLKVRHDSAVTALYADLPRQ 814

Query: 687  CTTCGLRFKLQEAHSSHMDWHVTRNRVTRNRKQKPSRKWFVSDNMWLTGAEALGTDSVPN 508
            CTTCGLRFK QEAHSSHMDWHVT+NRV++NRKQK SRKWFVS NMW +G EALG+D+ P 
Sbjct: 815  CTTCGLRFKCQEAHSSHMDWHVTKNRVSKNRKQKSSRKWFVSVNMWFSGTEALGSDAAPG 874

Query: 507  FLPSEDIVEKKDDEELAVPADDDQKCCALCGEPFDDFFCDERDEWMYKGAVYMNAPGGPA 328
            FLP+E +VEKKDDEELAVPADD+Q  CALCGEPFDDF+ DE +EWMYKGAVYMNAP G  
Sbjct: 875  FLPAEQVVEKKDDEELAVPADDEQNVCALCGEPFDDFYSDETEEWMYKGAVYMNAPSGST 934

Query: 327  ADMDRSQLGPIVHAKCRSETGTVSEDTKKRDQDFTEEGSQRKRMR 193
            A M++SQLGPI+HAKCRSE+    ++  +R  +  E+GSQRKRMR
Sbjct: 935  AGMEKSQLGPIIHAKCRSESSATPQEDSRRVDEGLEDGSQRKRMR 979


>XP_016432499.1 PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
            homolog 4-like [Nicotiana tabacum]
          Length = 986

 Score =  702 bits (1813), Expect = 0.0
 Identities = 447/1011 (44%), Positives = 566/1011 (55%), Gaps = 113/1011 (11%)
 Frame = -1

Query: 2886 MAISSKXXXXXTISERFREMVKEREEELRVSG-------DDVGL---SGDEIVRLYDILL 2737
            +A   K     +I ERFR  +KEREEELR S        DDV +   + DEIVRLY++ L
Sbjct: 19   VAAPPKPLPSPSIIERFRAALKEREEELRASSMPVVDDDDDVIVLPPTMDEIVRLYELFL 78

Query: 2736 SELSVNSKPIITDLTIIAGEQRMYGAGIADAICCRIIEVPVEQKLPSLYLLDSIVKNIGR 2557
            S+L+ NSKP+ITDLTIIAGEQR +G GIADAIC RI+EVPVEQKLPSLYLLDSIVKNIGR
Sbjct: 79   SDLTFNSKPVITDLTIIAGEQREHGQGIADAICSRILEVPVEQKLPSLYLLDSIVKNIGR 138

Query: 2556 EYIKYFSARLPEVFCDAYKQVHPNVHPAMRHLFGTWSTVFPLSVLRKIESHLQFXXXXXN 2377
            +Y+++FSA LPEVFC+AY+QVHP++HPAMRHLFGTWSTVFP  VLRKIE+ LQF      
Sbjct: 139  DYVRHFSAHLPEVFCEAYRQVHPSMHPAMRHLFGTWSTVFPAPVLRKIETRLQFSQPGPQ 198

Query: 2376 QSLALPPLRASESPRPAHGIHINPKYLEARRQFVNETADS-SVQPPRGVSTISKLSNQNH 2200
            QS  L   RASESPRP HGIH+NPKYLEARRQ  + T DS  V+ P G  +    + Q  
Sbjct: 199  QSSGLTSSRASESPRPTHGIHVNPKYLEARRQLGHSTIDSVRVENPAGHISSDLEAKQVL 258

Query: 2199 STDYEEFISDGDTDVXXXXXXXXXXXXXXXXXXXXXLPPTSSGRIEMSASLYGVGRVGFS 2020
            ST                                       + +   S+S Y VG     
Sbjct: 259  ST---------------------------------------ASKNARSSSPYRVGPARSL 279

Query: 2019 SPSLEHRQMDNSP---GRGASPLDSGIDYRTGGFLGSTARTDDWKRICVPGDSKNHVKTA 1849
            SP+L+   +DNS      GASP  S +DY      G     ++W+RI +P D+       
Sbjct: 280  SPTLDEFAVDNSAIGLREGASPSHSALDYGLNRVRGRDDERNEWQRI-LPDDANQQPDIP 338

Query: 1848 VR--------LNNGVDVDRTRALIDAYGVDKRTDMM--KHPGVEEMQVNGIGTEPTM-AW 1702
            V+        LN   D+   RALIDAYG+D+R  ++  +   +    +N +G    +  W
Sbjct: 339  VKYGLNKDYGLNRDFDLQGPRALIDAYGIDEREKLVNQRQRKMGNAAMNSLGERVAVKTW 398

Query: 1701 QNSEEEEFQWENMSPTLADHGRKDVFXXXXXXXXSFR-----NTASVPPHL---RQDWPN 1546
            QN+EEEEF WE+MSPTLAD    +            R     ++  V P +   R+ W N
Sbjct: 399  QNTEEEEFNWEDMSPTLADQSPFNDLSTSVRHPQGIRTRPGLDSQHVVPLVSDPRRSWSN 458

Query: 1545 RPQFPAVNGSSIVDVPSSTDGLENTVYA-------------IHRVPTH------------ 1441
            R Q+ +V+ SS+ DV SS  G  N +               + ++P +            
Sbjct: 459  RGQYSSVHDSSLDDVHSSGRGARNKITGYCDETSLISGSPYLQKLPENVPLLPQRHLKVE 518

Query: 1440 ----IQDSSTHQF--NATKVGNNARMP---------FQGSA-----------ILP--PNV 1345
                +     H    N    G+  R P         F+ S            I+P  P  
Sbjct: 519  GSGIVTGEPKHPLISNLVADGHTWRPPYIPPKMNPTFESSVQDIRAVTGRAPIVPWPPTD 578

Query: 1344 EQKPSSIGYSP-DLNTQNQGQPFMSRGGSHA-------RPMLQAYQNVNSSS-------- 1213
               P S+   P  L  Q+   PF  + GS++       +P+L   Q  NS S        
Sbjct: 579  VHNPQSLTSKPFVLPHQHIRSPFEVKNGSNSVANHNLDKPVLPGQQIDNSKSNSYIKFPQ 638

Query: 1212 FPDHNLNNTESILQNPMLPFSGQQLGPIPFNQSLVHTAMLPPHSLPHDMQ------HHAA 1051
            FP  +  +  + LQNP    S +    + F+Q + H   +P  SLP          +   
Sbjct: 639  FPSQHPASFSASLQNPEQVASAE--SQLLFSQRM-HQTTVPSASLPASNHFLLPPIYGYN 695

Query: 1050 PHSVVASVGTILPNLYM--QVRMPNLNAPNAST--XXXXXXXXXXXXXXGASHVLPIPQP 883
            P    +SVGT+LP      QV +P +N PN S+                 +S   P  Q 
Sbjct: 696  PQGPGSSVGTLLPLPVSGPQVSLPLVNIPNTSSQFSSGALPPLPRGPLPMSSQFTPTSQN 755

Query: 882  -SYSAPNPPVGGNFSNLFNSLMAQGVISLNQTSAKEDAVGLEFNPDLLKVRHESAVTALY 706
                 PNPP GG FS+L +SLMAQG+ISL   +  +D+VGL+FNPDLLKVRH+SAVTALY
Sbjct: 756  LGQVTPNPPAGG-FSSLISSLMAQGLISLTNEAPPQDSVGLDFNPDLLKVRHDSAVTALY 814

Query: 705  SDLPRQCTTCGLRFKLQEAHSSHMDWHVTRNRVTRNRKQKPSRKWFVSDNMWLTGAEALG 526
            +DLPRQCTTCGLRFK QEAHSSHMDWHVT+NRV++NRKQK SRKWFVS NMW +G EALG
Sbjct: 815  ADLPRQCTTCGLRFKCQEAHSSHMDWHVTKNRVSKNRKQKSSRKWFVSVNMWFSGTEALG 874

Query: 525  TDSVPNFLPSEDIVEKKDDEELAVPADDDQKCCALCGEPFDDFFCDERDEWMYKGAVYMN 346
            +D+ P FLP+E +VEKKDDEELAVPADD+Q  CALCGEPFDDF+ DE +EWMYKGAVYMN
Sbjct: 875  SDAAPGFLPAEQVVEKKDDEELAVPADDEQNVCALCGEPFDDFYSDETEEWMYKGAVYMN 934

Query: 345  APGGPAADMDRSQLGPIVHAKCRSETGTVSEDTKKRDQDFTEEGSQRKRMR 193
            AP G  A M++SQLGPI+HAKCRSE+     +  +R  +  E+GSQRKRMR
Sbjct: 935  APSGSTAGMEKSQLGPIIHAKCRSESSATPHEDSRRVDEGLEDGSQRKRMR 985


>XP_006342553.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
            [Solanum tuberosum]
          Length = 976

 Score =  699 bits (1804), Expect = 0.0
 Identities = 438/1014 (43%), Positives = 563/1014 (55%), Gaps = 106/1014 (10%)
 Frame = -1

Query: 2916 YKPTPLQMNTMAISSKXXXXXTISERFREMVKEREEELRVS---GDDVGL----SGDEIV 2758
            Y  + L  N  A++       ++ ER++  +KERE E+R S   GDD  +    S +EIV
Sbjct: 7    YANSKLIQNDAAVAPPKPLSSSVIERYKAALKEREMEIRASMPDGDDDVIVLPPSRNEIV 66

Query: 2757 RLYDILLSELSVNSKPIITDLTIIAGEQRMYGAGIADAICCRIIEVPVEQKLPSLYLLDS 2578
            RLY++LLSEL+ NSKPIITDLTIIAGEQR +G GIA AIC RI+EVPVEQKLP+LYLLDS
Sbjct: 67   RLYELLLSELAFNSKPIITDLTIIAGEQREHGEGIAHAICNRILEVPVEQKLPALYLLDS 126

Query: 2577 IVKNIGREYIKYFSARLPEVFCDAYKQVHPNVHPAMRHLFGTWSTVFPLSVLRKIESHLQ 2398
            +VKNIG++YIK+FSA LPEVFC+AY+QVHP++HPAMRHLFGTWSTVFP  VL+KIE+ LQ
Sbjct: 127  VVKNIGKDYIKHFSAHLPEVFCEAYRQVHPSMHPAMRHLFGTWSTVFPAPVLQKIETRLQ 186

Query: 2397 FXXXXXNQSLALPPLRASESPRPAHGIHINPKYLEARRQFVNETADSSVQPPRGVSTISK 2218
            F      QS  L   RASESPRP HGIH+NPKYLEARRQ  + T DS       V   + 
Sbjct: 187  FSQPGVQQSSGLTSSRASESPRPTHGIHVNPKYLEARRQLGHSTIDS-------VRAENS 239

Query: 2217 LSNQNHSTDYEEFISDGDTDVXXXXXXXXXXXXXXXXXXXXXLPPTSSGRIEMSASLYGV 2038
              + +   + ++ +S                               +S +   S+S Y V
Sbjct: 240  TGHISSDLEAKQVLS-------------------------------TSSKNARSSSPYTV 268

Query: 2037 GRVGFSSPSLEHRQMDNSPGRG----ASPLDSGIDYRTGGFLGSTARTDDWKRICVPGDS 1870
            G     SP+L    +DN P  G    ASP  + +DY      G      +W+RI   G +
Sbjct: 269  GPPRSLSPTLNEFALDN-PAIGLRERASPSHTALDYGFSRVRGRDVERSEWQRILPDGAN 327

Query: 1869 KN-HVKTAVRLNNGVDVDRTRALIDAYGVDKRTDM--MKHPGVEEMQVNGIGTEPTM-AW 1702
            +   + +  R+N G+D+   RALIDAYG+D+R  +  ++   +    +NG+G    +  W
Sbjct: 328  QQPDIPSKYRMNKGIDLQGPRALIDAYGIDEREKVSNLRQQKIGNATINGLGNRLAVKTW 387

Query: 1701 QNSEEEEFQWENMSPTLADHGRKDVFXXXXXXXXSFRNTASVPPHL--------RQDWPN 1546
            QN+EEEEF WE+MSPTLAD    +          S R    V            R+ W N
Sbjct: 388  QNTEEEEFNWEDMSPTLADQSPFNDLSASVRHPQSIRMRPGVDSQHAVPLVTDPRRSWAN 447

Query: 1545 RPQFPAVNGSSIVDVPSSTDGLENTV-------------YAIHRVPTHIQD--------- 1432
            R Q+  V+ SS+ DV SS  G  N +             + + ++P ++           
Sbjct: 448  RGQYSLVHDSSLDDVHSSGRGARNKITGYCDETSLISGSHYLQKLPENVPQLPLRHLKGE 507

Query: 1431 -----SSTHQFNATKVGNNA------RMPF---------------------QGSAI-LPP 1351
                 S+T +     +GN A      R P+                     +G  +  PP
Sbjct: 508  GSGISSATGELKHPLIGNLAADGHTWRPPYVPPRMNPTFDSSVQDIRVVTGRGPGVPWPP 567

Query: 1350 NVEQKPSSIGYSPDLNTQNQGQ-PFMSRGGSHA-------RPML--QAYQNVNSSS---- 1213
                 P S+   P +   N  + PF     S++       RP+L  Q   N+ SSS    
Sbjct: 568  QNVHTPQSLTSKPVVLPHNHVRSPFEVNNASNSVVNHTLDRPVLPEQHIDNLKSSSHIKF 627

Query: 1212 --FPDHNLNNTESILQNPMLPFSGQQLGPIPFNQSLVHTAMLPPHSLPHDMQHHAAP--- 1048
              FP  +  +  +  QNP    S +   P       +H  M P  SLP    +H  P   
Sbjct: 628  PQFPSQHPTSFSASHQNPEQMASAE---PQLLLSQRIHQTMPPSASLP--TSNHLLPPIY 682

Query: 1047 ----HSVVASVGTILPNLYM--QVRMPNLNAPNASTXXXXXXXXXXXXXXGA--SHVLPI 892
                    +S+GT  P      QV MP +N PN S+                  S  +P 
Sbjct: 683  RYPLQGPGSSIGTHFPRPVSGPQVSMPLVNVPNTSSQFSSGALPPFPRGPLPMPSKFMPA 742

Query: 891  PQ-PSYSAPNPPVGGNFSNLFNSLMAQGVISLNQTSAKEDAVGLEFNPDLLKVRHESAVT 715
             Q P    PNPP  G FS+L NSLMAQG+ISL   +  +D VGL+FNPDLLKVR +SAVT
Sbjct: 743  SQNPGQVTPNPPAAG-FSSLINSLMAQGLISLTNQAPAQDPVGLDFNPDLLKVRRDSAVT 801

Query: 714  ALYSDLPRQCTTCGLRFKLQEAHSSHMDWHVTRNRVTRNRKQKPSRKWFVSDNMWLTGAE 535
            ALY+DLPRQCTTCGLRFK QEAHSSHMDWHVT+NRV++NRKQK SRKWFVS NMWL+G E
Sbjct: 802  ALYADLPRQCTTCGLRFKCQEAHSSHMDWHVTKNRVSKNRKQKSSRKWFVSVNMWLSGTE 861

Query: 534  ALGTDSVPNFLPSEDIVEKKDDEELAVPADDDQKCCALCGEPFDDFFCDERDEWMYKGAV 355
            ALG+D+VP FLP+E +VE KDDEELAVPADD+Q  CALCGEPFDDF+ DE +EWMY+GAV
Sbjct: 862  ALGSDAVPGFLPTEQVVETKDDEELAVPADDEQNACALCGEPFDDFYSDETEEWMYRGAV 921

Query: 354  YMNAPGGPAADMDRSQLGPIVHAKCRSETGTVSEDTKKRDQDFTEEGSQRKRMR 193
            YMNAP G    M+RSQLGPI+HAKCRSE+     +  +   +  E+GSQRKRMR
Sbjct: 922  YMNAPSGSTVGMERSQLGPIIHAKCRSESSATPHEDSRNVDEGQEDGSQRKRMR 975


>CBI23183.3 unnamed protein product, partial [Vitis vinifera]
          Length = 1003

 Score =  698 bits (1801), Expect = 0.0
 Identities = 443/943 (46%), Positives = 552/943 (58%), Gaps = 57/943 (6%)
 Frame = -1

Query: 2850 ISERFREMVKEREEELRV-SGDDVGL-SGDEIVRLYDILLSELSVNSKPIITDLTIIAGE 2677
            I +RF+ ++K+RE+ELRV SGDDV   + +EIVRLY+I+LSEL  NSKPIITDLTIIAG+
Sbjct: 88   IVDRFKALLKQREDELRVLSGDDVPPPTTEEIVRLYEIVLSELIFNSKPIITDLTIIAGD 147

Query: 2676 QRMYGAGIADAICCRIIEVPVEQKLPSLYLLDSIVKNIGREYIKYFSARLPEVFCDAYKQ 2497
             + +  GIADAIC RI+EV VEQKLPSLYLLDSIVKNIGR+YIK+FS+RLPEVFC+AY+Q
Sbjct: 148  HKEHADGIADAICARIVEVSVEQKLPSLYLLDSIVKNIGRDYIKHFSSRLPEVFCEAYRQ 207

Query: 2496 VHPNVHPAMRHLFGTWSTVFPLSVLRKIESHLQFXXXXXNQSLALPPLRASESPRPAHGI 2317
            VHPN++ AMRHLFGTWS VFP SVLRKIE+ LQF     NQS  +  LRASESPRP H I
Sbjct: 208  VHPNLYTAMRHLFGTWSAVFPPSVLRKIEAQLQFSPTLNNQSSGMASLRASESPRPTHSI 267

Query: 2316 HINPKYLEARRQFVNETADSSVQPPRGVSTISKLSNQNHSTDYEEFISDGDTDVXXXXXX 2137
            H+NPKYLEAR QF +   DS++Q  RG S+  K+  Q  +  Y+E+ S G T+V      
Sbjct: 268  HVNPKYLEARHQFEHSPVDSNMQHSRGTSSTLKVYGQKPAIGYDEYDS-GHTEVISSQAR 326

Query: 2136 XXXXXXXXXXXXXXXLP------PTSSGRIEMSASLYGVGRVGFSSPSLEHRQMDNSPGR 1975
                                   P+S+ R+  S S   +G  G SSP  E   MDNSP R
Sbjct: 327  AQRLNSTGSVGRTPFALGADKLLPSSTARVAKSTSPR-IGTAGSSSPPAEKFSMDNSPRR 385

Query: 1974 ---GASPLDSGIDYRTGGFLGSTARTDDWKRICVPGDSKNHVKTAVRLNNGVDVDRTRAL 1804
                ASP   G +Y     +G    T D +R     D +     A  L+NG +    RAL
Sbjct: 386  VVERASPSHRGFEYGLVRSMGRDEETSDRQRKHWSND-RFETSAAHNLSNGRERQGLRAL 444

Query: 1803 IDAYGVDK--RTDMMKHPGVEEMQVNGIGTE-PTMAWQNSEEEEFQWENMSPTLADHGR- 1636
            IDAYG D+  RT   K P V  + +NG   + P  AWQN+EEEE+ WE+M+PTLA+  + 
Sbjct: 445  IDAYGNDRGQRTLNDKPPKVGHLDMNGTDNKVPKKAWQNTEEEEYDWEDMNPTLANRRQC 504

Query: 1635 KDVFXXXXXXXXSFRN------TASVP---PHLRQDWPNRPQFPAVNGSSIV--DVPSST 1489
             ++         SFR         + P      R  W  + Q   V+ S ++  DV  +T
Sbjct: 505  NNILQSSVSPFGSFRTRPGSGALGAAPLESDFNRSKWSGQAQLSMVDDSPVIAEDVVPTT 564

Query: 1488 D-----------GLENTVYA----------IHRVPTHIQDSSTHQFNATKVGNNARMPFQ 1372
                        G E   +           +HRVP     SS H  NA   G N   PF 
Sbjct: 565  SLGRGSISKPGFGNETKFHGSHYPQESWNLVHRVP----QSSQHNRNAKGRGKNFNTPFL 620

Query: 1371 GSAILPPNVEQKPSSIGYSPDLNTQNQGQPFM-SRGGSHARPMLQAYQNVNSSSFPDHNL 1195
            GS I     E     I   PD + Q +  P + SR GS +   +    NV S   P+   
Sbjct: 621  GSGISSSAAETISPLISNIPDADAQLRRLPTVASRMGSSSLNSM----NVESLFLPE--- 673

Query: 1194 NNTESILQNPMLPFSGQQLGPIPFN-QSLVHTAMLPPHSLPHDMQHHAAPHSVV-ASVGT 1021
                  L + +   + +Q G IP N ++      L P  LP +   +  P +    S  +
Sbjct: 674  ------LDSKLPQMANRQAGSIPLNGKNQTQVTRLQPQFLPQETHGNFVPSTTAPVSSYS 727

Query: 1020 ILPNLYMQVRMPNLNAPNASTXXXXXXXXXXXXXXGASHVLPIPQPSYSAPNPPV----- 856
            + P L      P  +A   ST              G    +PI   S S+   P+     
Sbjct: 728  VAPPLNPGY-TPQGHAAATST-------ILLNPVPGVHSSIPIHNISNSSNTGPIVSNQQ 779

Query: 855  -GGNFSNLFNSLMAQGVISLNQTSAKEDAVGLEFNPDLLKVRHESAVTALYSDLPRQCTT 679
             G   S L +SLMAQG+ISL +    +D+VG+EFN DLLKVRHESA++ALY D+ RQCTT
Sbjct: 780  PGSALSGLISSLMAQGLISLAKQPTVQDSVGIEFNVDLLKVRHESAISALYGDMSRQCTT 839

Query: 678  CGLRFKLQEAHSSHMDWHVTRNRVTRNRKQKPSRKWFVSDNMWLTGAEALGTDSVPNFLP 499
            CGLRFK QE HSSHMDWHVT+NR+++NRKQKPSRKWFVS +MWL+ AEALGTD+VP FLP
Sbjct: 840  CGLRFKCQEEHSSHMDWHVTKNRISKNRKQKPSRKWFVSASMWLSSAEALGTDAVPGFLP 899

Query: 498  SEDIVEKKDDEELAVPADDDQKCCALCGEPFDDFFCDERDEWMYKGAVYMNAPGGPAADM 319
            +E I EKKDDEELAVPAD+DQ  CALCGEPFDDF+ DE +EWMYKGAVY+NAP G AA M
Sbjct: 900  TETIAEKKDDEELAVPADEDQNVCALCGEPFDDFYSDETEEWMYKGAVYLNAPEGSAAGM 959

Query: 318  DRSQLGPIVHAKCRSETGTVS-EDTKKRDQDFTEEGSQRKRMR 193
            DRSQLGPIVHAKCRSE+  VS ED  + +    EEGS+RKRMR
Sbjct: 960  DRSQLGPIVHAKCRSESNVVSPEDFGQDEGGNMEEGSKRKRMR 1002


>XP_009601446.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
            [Nicotiana tomentosiformis]
          Length = 989

 Score =  697 bits (1799), Expect = 0.0
 Identities = 445/1001 (44%), Positives = 564/1001 (56%), Gaps = 108/1001 (10%)
 Frame = -1

Query: 2886 MAISSKXXXXXTISERFREMVKEREEELRVSG-------DDVGL---SGDEIVRLYDILL 2737
            +A   K     +I ERFR  +KEREEELR S        DDV +   + DEIVRLY++ L
Sbjct: 19   VAAPPKPLPSPSIIERFRAALKEREEELRASSMPVVDDDDDVIVLPPTMDEIVRLYELFL 78

Query: 2736 SELSVNSKPIITDLTIIAGEQRMYGAGIADAICCRIIEVPVEQKLPSLYLLDSIVKNIGR 2557
            S+L+ NSKP+ITDLTIIAGEQR +G GIADAIC RI+EVPVEQKLPSLYLLDSIVKNIGR
Sbjct: 79   SDLTFNSKPVITDLTIIAGEQREHGQGIADAICSRILEVPVEQKLPSLYLLDSIVKNIGR 138

Query: 2556 EYIKYFSARLPEVFCDAYKQVHPNVHPAMRHLFGTWSTVFPLSVLRKIESHLQFXXXXXN 2377
            +Y+++FSA LPEVFC+AY+QVHP++HPAMRHLFGTWSTVFP  VLRKIE+ LQF      
Sbjct: 139  DYVRHFSAHLPEVFCEAYRQVHPSMHPAMRHLFGTWSTVFPAPVLRKIETRLQFSQPGPQ 198

Query: 2376 QSLALPPLRASESPRPAHGIHINPKYLEARRQFVNETADS-SVQPPRGVSTISKLSNQNH 2200
            QS  L   RASESPRP HGIH+NPKYLEARRQ  + T DS  V+ P G  +    + Q  
Sbjct: 199  QSSGLTSSRASESPRPTHGIHVNPKYLEARRQLGHSTIDSVRVENPAGHISSDLEAKQVL 258

Query: 2199 STDYEEFISDGDTDVXXXXXXXXXXXXXXXXXXXXXLPPTSSGRIEMSASLYGVGRVGFS 2020
            ST                                       + +   S+S Y VG     
Sbjct: 259  ST---------------------------------------ASKNARSSSPYRVGPARSL 279

Query: 2019 SPSLEHRQMDNSP---GRGASPLDSGIDYRTGGFLGSTARTDDWKRICVPGDSKNHVKTA 1849
            SP+L+   +DNS      GASP  S +DY      G     ++W+RI +P D+       
Sbjct: 280  SPTLDEFAVDNSAIGLREGASPSHSALDYGLNRVRGRDDERNEWQRI-LPDDANQQPDIP 338

Query: 1848 VR--LNNGVDVDRTRALIDAYGVDKRTDMM--KHPGVEEMQVNGIGTEPTM-AWQNSEEE 1684
            V+  LN   D+   RALIDAYG+D+R  ++  +   +    +N +G    +  WQN+EEE
Sbjct: 339  VKYGLNRDFDLQGPRALIDAYGIDEREKLVNQRQRKMGNAAMNSLGERVAVKTWQNTEEE 398

Query: 1683 EFQWENMSPTLADHGRKDVFXXXXXXXXSFR-----NTASVPPHL---RQDWPNRPQFPA 1528
            EF WE+MSPTLAD    +            R     ++  V P +   R+ W NR Q+ +
Sbjct: 399  EFNWEDMSPTLADQSPFNDLSTSVRHPQGIRTRPGLDSQHVVPLVSDPRRSWSNRGQYSS 458

Query: 1527 VNGSSIVDVPSSTDG-----------------------LENTVYAIHRVPTHIQDSST-- 1423
            V+ SS+ DV SS  G                       L   V  +H+    ++ S    
Sbjct: 459  VHDSSLDDVHSSGRGARNKITGYCDETSLISGSPYLQKLPENVPLLHQRHLKVEGSGIVT 518

Query: 1422 ----HQF--NATKVGNNARMPF-------------------QGSAIL---PPNVEQKPSS 1327
                H    N    G+  R P+                    G A +   PP     P S
Sbjct: 519  GEPKHPLISNLVADGHTWRPPYIPPRMNPTFESSVQDIRAVTGRAPIVPWPPTDVHNPQS 578

Query: 1326 IGYSPD-LNTQNQGQPFMSRGGSHA-------RPMLQAYQNVNSSS--------FPDHNL 1195
            +   P  L  Q+   PF  + GS++       +P+L   Q  NS S        FP  + 
Sbjct: 579  LTSKPFVLPHQHIRSPFEVKNGSNSVANHNLDKPVLPGQQIDNSKSNSYIKFPQFPSQHP 638

Query: 1194 NNTESILQNPMLPFSGQQLGPIPFNQSLVHTAMLPPHSLPHDMQ------HHAAPHSVVA 1033
             +  + LQNP    S +    + F+Q + H   +P  SLP          +   P    +
Sbjct: 639  ASFSASLQNPEQVASAES--QLLFSQRM-HQTTVPSASLPASNHFLLPPIYGYNPQGPGS 695

Query: 1032 SVGTILPNLYM--QVRMPNLNAPNASTXXXXXXXXXXXXXXG--ASHVLPIPQP-SYSAP 868
            SVGT+LP      QV +P +N PN S+                 +S   P  Q      P
Sbjct: 696  SVGTLLPLPVSGPQVSLPLVNIPNTSSQFSSGALPPLPRGPLPMSSQFTPTSQNLGQVTP 755

Query: 867  NPPVGGNFSNLFNSLMAQGVISLNQTSAKEDAVGLEFNPDLLKVRHESAVTALYSDLPRQ 688
            NPP GG FS+L +SLMAQG+ISL   +  +D+VGL+FNPDLLKVRH+SAVTALY+DLPRQ
Sbjct: 756  NPPAGG-FSSLISSLMAQGLISLTNEAPPQDSVGLDFNPDLLKVRHDSAVTALYADLPRQ 814

Query: 687  CTTCGLRFKLQEAHSSHMDWHVTRNRVTRNRKQKPSRKWFVSDNMWLTGAEALGTDSVPN 508
            CTTCGLRFK QEAHSSHMDWHVT+NRV++NRKQK SRKWFVS NMW +G EALG+D+ P 
Sbjct: 815  CTTCGLRFKCQEAHSSHMDWHVTKNRVSKNRKQKSSRKWFVSVNMWFSGTEALGSDAAPG 874

Query: 507  FLPSEDIVEKKDDEELAVPADDDQKCCALCGEPFDDFFCDERDEWMYKGAVYMNAPGGPA 328
            FLP+E +VEKKDDEELAVPADD+Q  CALCGEPFDDF+ DE +EWMYKGAVYMNAP G  
Sbjct: 875  FLPAEQVVEKKDDEELAVPADDEQNVCALCGEPFDDFYSDETEEWMYKGAVYMNAPSGST 934

Query: 327  ADMDRSQLGPIVHAKCRSE-TGTVSEDTKKRDQDFTEEGSQ 208
            A M++SQLGPI+HAKCRSE + T  ED+++ D+ F +E +Q
Sbjct: 935  AGMEKSQLGPIIHAKCRSESSATPQEDSRRVDEKFLQEEAQ 975


>CDO99723.1 unnamed protein product [Coffea canephora]
          Length = 1005

 Score =  696 bits (1796), Expect = 0.0
 Identities = 435/998 (43%), Positives = 558/998 (55%), Gaps = 115/998 (11%)
 Frame = -1

Query: 2850 ISERFREMVKEREEELRVSG--DDVGLSGDEIVRLYDILLSELSVNSKPIITDLTIIAGE 2677
            I +RFR+M+KERE+ELRVS   D V LS D++V+LY+++LSEL  NSKP+ITDLTIIAGE
Sbjct: 42   ILDRFRDMLKEREDELRVSEGVDVVLLSSDDVVKLYEVVLSELVFNSKPVITDLTIIAGE 101

Query: 2676 QRMYGAGIADAICCRIIEVPVEQKLPSLYLLDSIVKNIGREYIKYFSARLPEVFCDAYKQ 2497
            QR +G GIADAIC RIIE PVEQKLP LYLLDS+VKNIGR+Y++YFSARLPEVFC+AY Q
Sbjct: 102  QRRHGQGIADAICARIIEAPVEQKLPFLYLLDSVVKNIGRDYVRYFSARLPEVFCEAYNQ 161

Query: 2496 VHPNVHPAMRHLFGTWSTVFPLSVLRKIESHLQFXXXXXNQSLALPPLRASESPRPAHGI 2317
            VHPN++P+MRHLF TWS+VF  SVLRKIE+ L+F     +Q  +L   RASESPRP HGI
Sbjct: 162  VHPNMYPSMRHLFKTWSSVFHSSVLRKIEALLEFSPPMNDQPSSLTSGRASESPRPTHGI 221

Query: 2316 HINPKYLEARRQFVNETADSSVQPPRGVSTISKLSNQNHSTDYEEFISDGDTDVXXXXXX 2137
            H+NPKYLEARRQ  + TAD++V          +LS ++H+ +    +             
Sbjct: 222  HVNPKYLEARRQLGHATADAAVT--------ERLSLRDHTDNTASGLG------------ 261

Query: 2136 XXXXXXXXXXXXXXXLPPTSSGRIEMSASLYGVGRVGFSSPSLEHRQMDNSPGRGA---S 1966
                           +   S+ R+  S+S YGV      SPSL++  +D SP R A   S
Sbjct: 262  ------------AVKMIRPSAARLAGSSSPYGVKHGRSLSPSLDNIAVDGSPRRAAEKAS 309

Query: 1965 PLDSGIDYRTGGFLGSTARTDDWKRICVP-GDSKNHVKTAVRLNNGVDVDRTRALIDAYG 1789
            P  SG +Y      G      DW+R  +  G S      A R NNG+D+DR RALIDAYG
Sbjct: 310  PSQSGFEYGFARTSGRHEEASDWQRNTLTNGTSVKFETPAYRYNNGIDLDRPRALIDAYG 369

Query: 1788 VDKR--TDMMKHPGVEEMQVNGIGTEPTM-AWQNSEEEEFQWENMSPTLADHGR-KDVFX 1621
            +D+R      KH  V+   VNGI    ++  WQN+EEEEF WE+MSPTL D  R  D+F 
Sbjct: 370  IDEREKPPSHKHLKVDHSIVNGINKSASLKTWQNTEEEEFNWEDMSPTLGDSSRNNDLFS 429

Query: 1620 XXXXXXXSFRNTASV----PPHL-----RQDWPNRPQFPAVNGSS---IVDVPSSTDGLE 1477
                   +FR          PHL     R ++  + Q P  + SS    V   SS  G+ 
Sbjct: 430  SSIPPSANFRTRPGFRTHPDPHLATSDFRSNFSKQAQLPIFSDSSPSENVSAVSSVRGVI 489

Query: 1476 NTVYAIHRVPTHIQD----------------SSTHQFNATKVGNNARMPFQGSAILPPNV 1345
              V        H+                  SS    +    G N +M F G  I P + 
Sbjct: 490  KKVAGFRDENKHVSSSHFPKDGFSMPQSHGRSSQQHLSIKGSGRNHQMSFSGMGIAPSS- 548

Query: 1344 EQKPSSIGYSPDLNTQNQGQPFM-----SRGGSHARPMLQAYQNVNSSSFP---DHNLNN 1189
            E KP S+   P+ + + +G   +     S G +   P +Q+     S   P   +   + 
Sbjct: 549  EYKPPSVSNFPNADPRIRGPSAVVSRIGSSGFASLTPEMQSIATPASMGVPPSVNIRASY 608

Query: 1188 TESILQNP-------------------MLPFSGQQLG---------PIPFNQ-------- 1117
             +++L +P                   M  F GQQLG         P P NQ        
Sbjct: 609  HQALLASPPMHEQIGYQPDAVGHQGMTMPNFPGQQLGSIENKPVSMPQPSNQPRGLIPPN 668

Query: 1116 -------------------------SLVHTAMLPPHSL---PHDMQHHAAPHSVVASVGT 1021
                                      +     LPP +L   P D  +    H V A +GT
Sbjct: 669  LQVGPHVNLSYSQPQPLPSQEARQNMVPPVPYLPPSNLVRPPLDHGYVPQVHGVHAIMGT 728

Query: 1020 ----ILPNLYMQVRMPNLNAPNASTXXXXXXXXXXXXXXGASHVLPIPQPSYSAPNPPVG 853
                ++PN+   + +P++   + S                ++ +     P    PNPP G
Sbjct: 729  GLQNVIPNVQSSMPVPSIVNASLSLPGVSMPPLQGSRPVSSTMIHITQNPGPVGPNPPAG 788

Query: 852  GNFSNLFNSLMAQGVISLNQTSAKEDAVGLEFNPDLLKVRHESAVTALYSDLPRQCTTCG 673
            G  S LFNSLMAQG+ISL + +  +D++ L+FN D LKVRHESA+ ALY+DLPRQCT CG
Sbjct: 789  GPLSGLFNSLMAQGLISLTKEAPMQDSMVLDFNQDTLKVRHESAIKALYADLPRQCTACG 848

Query: 672  LRFKLQEAHSSHMDWHVTRNRVTRNRKQKPSRKWFVSDNMWLTGAEALGTDSVPNFLPSE 493
            +RFK QEAHSSHMDWHV RNR ++N KQKPSR WFV  +MWL  AEALGTD+VP+FLP E
Sbjct: 849  VRFKCQEAHSSHMDWHVKRNRKSKN-KQKPSRNWFVRVDMWLRNAEALGTDAVPSFLPIE 907

Query: 492  DIVEKKDDEELAVPADDDQKCCALCGEPFDDFFCDERDEWMYKGAVYMNAPGGPAADMDR 313
            D VE+ DDEELAVPADDDQK CALCGEPFDDF+ DE +EWMY+GAVYMNAP G  A M+R
Sbjct: 908  DAVEQNDDEELAVPADDDQKFCALCGEPFDDFYSDETEEWMYRGAVYMNAPAGSTAGMNR 967

Query: 312  SQLGPIVHAKCRSETGTVSEDTKKRDQ-DFTEEGSQRK 202
            SQLGPI+H+KCRSET   S +   +D+  +TEEGS++K
Sbjct: 968  SQLGPIIHSKCRSETSGASAEVLSKDRGGYTEEGSEKK 1005


>XP_017645981.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
            [Gossypium arboreum] KHG24664.1 Pre-mRNA cleavage complex
            2 Pcf11 [Gossypium arboreum]
          Length = 1004

 Score =  695 bits (1793), Expect = 0.0
 Identities = 448/1003 (44%), Positives = 569/1003 (56%), Gaps = 117/1003 (11%)
 Frame = -1

Query: 2850 ISERFREMVKEREEELRVSG---DDVGLSG--DEIVRLYDILLSELSVNSKPIITDLTII 2686
            ISERF+ ++K+RE+ELRVSG   DD G +   +EIV+LY+++LSEL+ NSKPIITDLTII
Sbjct: 15   ISERFKALLKQREDELRVSGGIADDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLTII 74

Query: 2685 AGEQRMYGAGIADAICCRIIEVPVEQKLPSLYLLDSIVKNIGREYIKYFSARLPEVFCDA 2506
            AGEQR +G GIADAIC RIIEVPVEQKLPSLYLLDSIVKNIGREY++YFS+RLPEVFC+A
Sbjct: 75   AGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFCEA 134

Query: 2505 YKQVHPNVHPAMRHLFGTWSTVFPLSVLRKIESHLQFXXXXXNQSLALPPLRASESPRPA 2326
            Y+QV+PN+HPAMRHLFGTWSTVFP SVLRKIE  LQF      QS  +  L++SESPRP 
Sbjct: 135  YRQVNPNLHPAMRHLFGTWSTVFPPSVLRKIEMQLQFSQTGNQQSSGVTSLQSSESPRPT 194

Query: 2325 HGIHINPKYLEARRQFVNETADSSVQPPRGVSTISKLSNQNHSTDYEEFISDGDTDVXXX 2146
            HGIH+NPKYL    Q     ADS+ Q  RG+S   KL  Q H+  Y+EF SD  T+V   
Sbjct: 195  HGIHVNPKYLRQLEQ--QSGADSNTQHVRGMSAGQKLYGQKHTIAYDEFDSD-HTEVPSS 251

Query: 2145 XXXXXXXXXXXXXXXXXXL------PPTSSGRIEMSASLYGVGRVGFSSPSLEHRQMDNS 1984
                                       +S+ R+    S   +G     S  ++    D+S
Sbjct: 252  HVGVQRLSSTGNVGRTSLAIGANKSQLSSASRVSRPFSPSRIGSDRLLSSEIDDLPSDDS 311

Query: 1983 PGRGASPLDSG----IDYRTGGFLGSTARTDDWKRICVPGDSKNHVKT---AVRLNNGVD 1825
            P R A           D+  G        T +W R    GD +N  ++   A +L+NG +
Sbjct: 312  PRRFAEVASPSRPPVFDFGRGRGTIRDEETREWPRKHFYGDYRNCSESSLNAYKLSNGNE 371

Query: 1824 VDRTRALIDAYGVDKRTDMM--KHPGVEEMQVNGIGTEPT-MAWQNSEEEEFQWENMSPT 1654
                RALIDAYG D+   M   K   VE + +NG+G + T  +WQN+EEEEF WE+MSPT
Sbjct: 372  RQTLRALIDAYGNDRGQGMSNSKPVQVERLDLNGMGNKVTPRSWQNTEEEEFDWEDMSPT 431

Query: 1653 LADHGRKDVFXXXXXXXXSFRNTASVPPHL---RQDWPNRPQFPAVNGSSIVD--VPSST 1489
            LAD  R + F         F +  + P  L   R    N+ Q      S+I +  VPS +
Sbjct: 432  LADR-RSNEFSVSSVST--FGSIGARPAGLESNRSSRSNQTQLALDESSTIPEDTVPSLS 488

Query: 1488 DGLENTVYAIHRVPTHIQDS---------STHQFNATKVGNNARMPFQGSA--------- 1363
             G  + +  I R P + QD+         S+HQ +A   G + R PF  S          
Sbjct: 489  SG--HGLNQIQR-PRYPQDAWSNSYPFSQSSHQLHAKGRGRDFRTPFSASGISSLGGDKN 545

Query: 1362 --------------ILPPNVEQK------------------PSSIGYSPDLNTQNQGQP- 1282
                          + PP +  +                  P + G  P +N      P 
Sbjct: 546  VPLIEKLPEGGSQFVRPPALVPRSGSSSLDTVTVGAQPAMLPLTAGAWPPVNVLKSQPPT 605

Query: 1281 ------FMSRGGSHARPM--LQAYQNVNSSSFP------DHNLNNTESILQNPMLPFSGQ 1144
                      G SH   +  + A  N   +  P      D+  +  +S+   P LP  GQ
Sbjct: 606  AHTNYSLQQHGRSHFDSLNPINAAMNQGQNKHPYMPEQFDNFESKEQSLTTVPQLP--GQ 663

Query: 1143 QLGPIPFNQSLVH--------------------TAMLPPHSLPHDMQHHAAPHSVVASVG 1024
            +  P    ++ +H                    T  LPP  L   M H  +P    A + 
Sbjct: 664  R--PALRQRNSLHGSLQLHFTPHEARDSFLSSATGPLPPRLLAPSMNHGYSPQMHGAGI- 720

Query: 1023 TILPNLYMQVRMPNLNAPNASTXXXXXXXXXXXXXXG----ASHVLPIPQPSYSA-PNPP 859
            +++P+  + V  P L+ PN  T                   AS ++P  Q +    PN P
Sbjct: 721  SMVPSNPVPVAQPPLSIPNMPTGSLHLQGGAIPPLPPGPRPASQMMPATQNAGPLLPNQP 780

Query: 858  VGGNFSNLFNSLMAQGVISLNQTSAKEDAVGLEFNPDLLKVRHESAVTALYSDLPRQCTT 679
             GG F+ L +SLMAQG+ISL + +  +D+VGLEF+ DLLKVRHESA++ALY+DLPRQCTT
Sbjct: 781  QGGPFTGLISSLMAQGLISLTKPTPIQDSVGLEFDADLLKVRHESAISALYADLPRQCTT 840

Query: 678  CGLRFKLQEAHSSHMDWHVTRNRVTRNRKQKPSRKWFVSDNMWLTGAEALGTDSVPNFLP 499
            CGLRFK QE HS+HMDWHVTRNR+++NRKQKPSRKWFVS +MWL+GAEALGTD+VP FLP
Sbjct: 841  CGLRFKFQEEHSTHMDWHVTRNRMSKNRKQKPSRKWFVSASMWLSGAEALGTDAVPGFLP 900

Query: 498  SEDIVEKKDDEELAVPADDDQKCCALCGEPFDDFFCDERDEWMYKGAVYMNAPGGPAADM 319
            +EDIVEKKDDEELAVPAD+DQ  CALCGEPFDDF+ DE +EWMY+GAVYMNAP G    +
Sbjct: 901  TEDIVEKKDDEELAVPADEDQNLCALCGEPFDDFYSDETEEWMYRGAVYMNAPSGSVEGI 960

Query: 318  DRSQLGPIVHAKCRSETGTV-SEDTKKRDQDFTEEGSQRKRMR 193
            DRSQLGPIVHAKCRSE+  V  ED  + D    E+ SQRKR+R
Sbjct: 961  DRSQLGPIVHAKCRSESSVVPPEDFVRYDGGNPEDSSQRKRLR 1003


>XP_015162085.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
            [Solanum tuberosum]
          Length = 980

 Score =  693 bits (1789), Expect = 0.0
 Identities = 438/1018 (43%), Positives = 563/1018 (55%), Gaps = 110/1018 (10%)
 Frame = -1

Query: 2916 YKPTPLQMNTMAISSKXXXXXTISERFREMVKEREEELRVS---GDDVGL----SGDEIV 2758
            Y  + L  N  A++       ++ ER++  +KERE E+R S   GDD  +    S +EIV
Sbjct: 7    YANSKLIQNDAAVAPPKPLSSSVIERYKAALKEREMEIRASMPDGDDDVIVLPPSRNEIV 66

Query: 2757 RLYDILLSELSVNSKPIITDLTIIAGEQRMYGAGIADAICCRIIEVPVEQKLPSLYLLDS 2578
            RLY++LLSEL+ NSKPIITDLTIIAGEQR +G GIA AIC RI+EVPVEQKLP+LYLLDS
Sbjct: 67   RLYELLLSELAFNSKPIITDLTIIAGEQREHGEGIAHAICNRILEVPVEQKLPALYLLDS 126

Query: 2577 IVKNIGREYIKYFSARLPEVFCDAYKQVHPNVHPAMRHLFGTWSTVFPLSVLRKIESHLQ 2398
            +VKNIG++YIK+FSA LPEVFC+AY+QVHP++HPAMRHLFGTWSTVFP  VL+KIE+ LQ
Sbjct: 127  VVKNIGKDYIKHFSAHLPEVFCEAYRQVHPSMHPAMRHLFGTWSTVFPAPVLQKIETRLQ 186

Query: 2397 FXXXXXNQSLALPPLRASESPRPAHGIHINPKYLEARRQFVNETADSSVQPPRGVSTISK 2218
            F      QS  L   RASESPRP HGIH+NPKYLEARRQ  + T DS       V   + 
Sbjct: 187  FSQPGVQQSSGLTSSRASESPRPTHGIHVNPKYLEARRQLGHSTIDS-------VRAENS 239

Query: 2217 LSNQNHSTDYEEFISDGDTDVXXXXXXXXXXXXXXXXXXXXXLPPTSSGRIEMSASLYGV 2038
              + +   + ++ +S                               +S +   S+S Y V
Sbjct: 240  TGHISSDLEAKQVLS-------------------------------TSSKNARSSSPYTV 268

Query: 2037 GRVGFSSPSLEHRQMDNSPGRG----ASPLDSGIDYRTGGFLGSTARTDDWKRICVPGDS 1870
            G     SP+L    +DN P  G    ASP  + +DY      G      +W+RI   G +
Sbjct: 269  GPPRSLSPTLNEFALDN-PAIGLRERASPSHTALDYGFSRVRGRDVERSEWQRILPDGAN 327

Query: 1869 KN-HVKTAVRLNNGVDVDRTRALIDAYGVDKRTDM--MKHPGVEEMQVNGIGTEPTM-AW 1702
            +   + +  R+N G+D+   RALIDAYG+D+R  +  ++   +    +NG+G    +  W
Sbjct: 328  QQPDIPSKYRMNKGIDLQGPRALIDAYGIDEREKVSNLRQQKIGNATINGLGNRLAVKTW 387

Query: 1701 QNSEEEEFQWENMSPTLADHGRKDVFXXXXXXXXSFRNTASVPPHL--------RQDWPN 1546
            QN+EEEEF WE+MSPTLAD    +          S R    V            R+ W N
Sbjct: 388  QNTEEEEFNWEDMSPTLADQSPFNDLSASVRHPQSIRMRPGVDSQHAVPLVTDPRRSWAN 447

Query: 1545 RPQFPAVNGSSIVDVPS----STDGLENTV-------------YAIHRVPTHIQD----- 1432
            R Q+  V+ SS+ DV S    S  G  N +             + + ++P ++       
Sbjct: 448  RGQYSLVHDSSLDDVHSFFWQSGRGARNKITGYCDETSLISGSHYLQKLPENVPQLPLRH 507

Query: 1431 ---------SSTHQFNATKVGNNA------RMPF---------------------QGSAI 1360
                     S+T +     +GN A      R P+                     +G  +
Sbjct: 508  LKGEGSGISSATGELKHPLIGNLAADGHTWRPPYVPPRMNPTFDSSVQDIRVVTGRGPGV 567

Query: 1359 -LPPNVEQKPSSIGYSPDLNTQNQGQ-PFMSRGGSHA-------RPML--QAYQNVNSSS 1213
              PP     P S+   P +   N  + PF     S++       RP+L  Q   N+ SSS
Sbjct: 568  PWPPQNVHTPQSLTSKPVVLPHNHVRSPFEVNNASNSVVNHTLDRPVLPEQHIDNLKSSS 627

Query: 1212 ------FPDHNLNNTESILQNPMLPFSGQQLGPIPFNQSLVHTAMLPPHSLPHDMQHHAA 1051
                  FP  +  +  +  QNP    S +   P       +H  M P  SLP    +H  
Sbjct: 628  HIKFPQFPSQHPTSFSASHQNPEQMASAE---PQLLLSQRIHQTMPPSASLP--TSNHLL 682

Query: 1050 P-------HSVVASVGTILPNLYM--QVRMPNLNAPNASTXXXXXXXXXXXXXXGA--SH 904
            P           +S+GT  P      QV MP +N PN S+                  S 
Sbjct: 683  PPIYRYPLQGPGSSIGTHFPRPVSGPQVSMPLVNVPNTSSQFSSGALPPFPRGPLPMPSK 742

Query: 903  VLPIPQ-PSYSAPNPPVGGNFSNLFNSLMAQGVISLNQTSAKEDAVGLEFNPDLLKVRHE 727
             +P  Q P    PNPP  G FS+L NSLMAQG+ISL   +  +D VGL+FNPDLLKVR +
Sbjct: 743  FMPASQNPGQVTPNPPAAG-FSSLINSLMAQGLISLTNQAPAQDPVGLDFNPDLLKVRRD 801

Query: 726  SAVTALYSDLPRQCTTCGLRFKLQEAHSSHMDWHVTRNRVTRNRKQKPSRKWFVSDNMWL 547
            SAVTALY+DLPRQCTTCGLRFK QEAHSSHMDWHVT+NRV++NRKQK SRKWFVS NMWL
Sbjct: 802  SAVTALYADLPRQCTTCGLRFKCQEAHSSHMDWHVTKNRVSKNRKQKSSRKWFVSVNMWL 861

Query: 546  TGAEALGTDSVPNFLPSEDIVEKKDDEELAVPADDDQKCCALCGEPFDDFFCDERDEWMY 367
            +G EALG+D+VP FLP+E +VE KDDEELAVPADD+Q  CALCGEPFDDF+ DE +EWMY
Sbjct: 862  SGTEALGSDAVPGFLPTEQVVETKDDEELAVPADDEQNACALCGEPFDDFYSDETEEWMY 921

Query: 366  KGAVYMNAPGGPAADMDRSQLGPIVHAKCRSETGTVSEDTKKRDQDFTEEGSQRKRMR 193
            +GAVYMNAP G    M+RSQLGPI+HAKCRSE+     +  +   +  E+GSQRKRMR
Sbjct: 922  RGAVYMNAPSGSTVGMERSQLGPIIHAKCRSESSATPHEDSRNVDEGQEDGSQRKRMR 979


>XP_004253131.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
            [Solanum lycopersicum]
          Length = 975

 Score =  693 bits (1788), Expect = 0.0
 Identities = 441/1014 (43%), Positives = 565/1014 (55%), Gaps = 106/1014 (10%)
 Frame = -1

Query: 2916 YKPTPLQMNTMAISSKXXXXXTISERFREMVKEREEELRVS---GDDVGL----SGDEIV 2758
            Y  + L  N  A++       ++ ER++  +KERE E+R S   GDD  +    S +EIV
Sbjct: 7    YANSKLIQNDAAVAPPKPLSSSVIERYKSALKEREIEIRASMQGGDDDVIVLPPSMNEIV 66

Query: 2757 RLYDILLSELSVNSKPIITDLTIIAGEQRMYGAGIADAICCRIIEVPVEQKLPSLYLLDS 2578
            RLY++LLSEL+ NSKPIITDLTIIAGEQR +G GIA AIC RI+EVPVEQKLP+LYLLDS
Sbjct: 67   RLYEMLLSELAFNSKPIITDLTIIAGEQREHGEGIAHAICNRILEVPVEQKLPALYLLDS 126

Query: 2577 IVKNIGREYIKYFSARLPEVFCDAYKQVHPNVHPAMRHLFGTWSTVFPLSVLRKIESHLQ 2398
            +VKNIG++YIK+FSA LPEVFC+AY+QVHP++HPAMRHLFGTWSTVFP  VL+KIE+ LQ
Sbjct: 127  VVKNIGKDYIKHFSAHLPEVFCEAYRQVHPSMHPAMRHLFGTWSTVFPAPVLQKIETRLQ 186

Query: 2397 FXXXXXNQSLALPPLRASESPRPAHGIHINPKYLEARRQFVNETADSSVQPPRGVSTISK 2218
            F      QS  L   RASESPRPAHGIH+NPKYLEARRQ  + T DS       V   + 
Sbjct: 187  FSQPGVQQSSGLTSSRASESPRPAHGIHVNPKYLEARRQLGHSTIDS-------VRAENS 239

Query: 2217 LSNQNHSTDYEEFISDGDTDVXXXXXXXXXXXXXXXXXXXXXLPPTSSGRIEMSASLYGV 2038
              + +   + ++ +S                               +S +   S+S Y V
Sbjct: 240  TGHISSDLEAKQVLS-------------------------------TSSKNARSSSPYRV 268

Query: 2037 GRVGFSSPSLEHRQMDNSPGRG----ASPLDSGIDYRTGGFLGSTARTDDWKRICVPGDS 1870
            G     SP+L    +DN P  G    ASP  + +DY      G      +W+RI   G +
Sbjct: 269  GPPRSLSPTLNEFALDN-PAIGLRERASPSHTALDYGFSRVRGRDVERSEWQRILPDGAN 327

Query: 1869 KN-HVKTAVRLNNGVDVDRTRALIDAYGVDKRTDM--MKHPGVEEMQVNGIGTEPTM-AW 1702
            +   V    R+N G+D+   RALIDAYG+D+R  +  ++        +NG+G    +  W
Sbjct: 328  QQPDVPPKYRINKGIDLQGPRALIDAYGIDEREKVAHLRQQKTGNATINGLGNGLAVKTW 387

Query: 1701 QNSEEEEFQWENMSPTLADHGRKDVFXXXXXXXXSFRNTASVPPHL--------RQDWPN 1546
            QN+EEEEF WE+MSPTLAD    +          S R    V            R++W N
Sbjct: 388  QNTEEEEFNWEDMSPTLADQSPFNDLSASLRHPQSIRMRPCVDSQHAGPLVADPRRNWAN 447

Query: 1545 RPQFPAVNGSSIVDVPSSTDGLENTV-------------YAIHRVPTHIQD--------- 1432
            R Q+  V+ SS+ DV SS  G  N +             + + ++P ++           
Sbjct: 448  RGQYSLVHDSSVDDVHSSGRGARNKITGYCDETSLISGSHYLQKLPENVPQLPLRHLKGE 507

Query: 1431 -----SSTHQFNATKVGNNA------RMPF---------------------QGSAI-LPP 1351
                 S T +     +GN A      R P+                     +G  +  PP
Sbjct: 508  GSGISSVTGESKHPLIGNLAADGHTWRPPYVPPRMNPTFDSSVQDVRVVTGRGPGVPWPP 567

Query: 1350 NVEQKPSSIGYSPDLNTQNQGQ-PFMSRGGSHA-------RPML--QAYQNVNSSS---- 1213
                 P S+   P +   N  + P+     S++       RP+L  Q   N+ SSS    
Sbjct: 568  QNVHTPHSLTSKPVVLPHNHVRSPYEVNNASNSVVNHTLDRPVLPEQHIDNLKSSSHIKF 627

Query: 1212 --FPDHNLNNTESILQNPMLPFSGQQLGPIPFNQSLVHTAMLPPHSLPHDMQHHAAPHSV 1039
              FP  +  +  +  QN     S +   P       +H  M P  SLP    +H  P + 
Sbjct: 628  PQFPSQHPTSFSTSHQNSEQMASAE---PQLLLSQRIHQTMPPSASLP--ASNHLLPPTY 682

Query: 1038 V-------ASVGTILPNLYM--QVRMPNLNAPNASTXXXXXXXXXXXXXXGA--SHVLPI 892
                    +S+G   P      QV MP +N PN S+                  S  +P 
Sbjct: 683  RYPLPGPGSSIGPHFPRPVSGPQVSMPLVNVPNTSSQFSSGALPPFPRGPLPMPSKFMPA 742

Query: 891  PQ-PSYSAPNPPVGGNFSNLFNSLMAQGVISLNQTSAKEDAVGLEFNPDLLKVRHESAVT 715
             Q P    PNPP  G FS+L NSLMAQG+ISL   +  +D VGL+FNPDLLKVRH+SAVT
Sbjct: 743  SQNPGQVTPNPPAAG-FSSLINSLMAQGLISLTNQAPAQDPVGLDFNPDLLKVRHDSAVT 801

Query: 714  ALYSDLPRQCTTCGLRFKLQEAHSSHMDWHVTRNRVTRNRKQKPSRKWFVSDNMWLTGAE 535
            ALY+DLPRQCTTCGLRFK QEAHSSHMDWHVT+NRV++NRKQK SRKWFVS NMWL+G E
Sbjct: 802  ALYADLPRQCTTCGLRFKCQEAHSSHMDWHVTKNRVSKNRKQKSSRKWFVSVNMWLSGTE 861

Query: 534  ALGTDSVPNFLPSEDIVEKKDDEELAVPADDDQKCCALCGEPFDDFFCDERDEWMYKGAV 355
            ALG+D+VP FLP+E +VE KDDEELAVPADD+Q  CALCGEPFDDF+ DE +EWMY+GAV
Sbjct: 862  ALGSDAVPGFLPTEQVVETKDDEELAVPADDEQNACALCGEPFDDFYSDETEEWMYRGAV 921

Query: 354  YMNAPGGPAADMDRSQLGPIVHAKCRSETGTVSEDTKKRDQDFTEEGSQRKRMR 193
            YMNAP G    M+RSQLGPI+HAKCRSE+    ED++K D+   E+ SQRKRMR
Sbjct: 922  YMNAPSGSTVGMERSQLGPIIHAKCRSESSAPHEDSRKVDEG-PEDESQRKRMR 974


>XP_016683609.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X2 [Gossypium hirsutum]
          Length = 1004

 Score =  693 bits (1789), Expect = 0.0
 Identities = 454/1004 (45%), Positives = 570/1004 (56%), Gaps = 118/1004 (11%)
 Frame = -1

Query: 2850 ISERFREMVKEREEELRVSG---DDVGLSG--DEIVRLYDILLSELSVNSKPIITDLTII 2686
            ISERF+ ++K+RE+ELRVSG   DD G +   +EIV+LY+++LSEL+ NSKPIITDLTII
Sbjct: 15   ISERFKALLKQREDELRVSGGVADDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLTII 74

Query: 2685 AGEQRMYGAGIADAICCRIIEVPVEQKLPSLYLLDSIVKNIGREYIKYFSARLPEVFCDA 2506
            AGEQR +G GIADAIC RIIEVPVEQKLPSLYLLDSIVKNIGREY++YFS+RLPEVFC+A
Sbjct: 75   AGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFCEA 134

Query: 2505 YKQVHPNVHPAMRHLFGTWSTVFPLSVLRKIESHLQFXXXXXNQSLALPPLRASESPRPA 2326
            Y+QV+PN+HPAMRHLFGTWSTVFP SVL KIE  LQF      QS  +  L++SESPRP 
Sbjct: 135  YRQVNPNLHPAMRHLFGTWSTVFPPSVLHKIEMQLQFSQTGNQQSSGVTSLQSSESPRPT 194

Query: 2325 HGIHINPKYLEARRQFVNET-ADSSVQPPRGVSTISKLSNQNHSTDYEEFISDGDTDVXX 2149
            HGIH+NPKYL   RQF  ++ ADS+ Q  RG+S   KL  Q H+  Y+EF SD  T+V  
Sbjct: 195  HGIHVNPKYL---RQFEQQSGADSNTQHVRGMSAGQKLYGQKHTIAYDEFDSD-HTEVPS 250

Query: 2148 XXXXXXXXXXXXXXXXXXXL------PPTSSGRIEMSASLYGVGRVGFSSPSLEHRQMDN 1987
                                        +S+ R+    S   +G     S  ++    D+
Sbjct: 251  SHVGVQRLSSTGNVGCTSLAIGANKSQLSSASRVSRPFSPSRIGSDRLLSSEVDDLPSDD 310

Query: 1986 SPGRGASPLDSG----IDYRTGGFLGSTARTDDWKRICVPGDSKNHVKTAV---RLNNGV 1828
            SP R A           D+  G        T +W R    GD +N  + ++   +L+NG 
Sbjct: 311  SPRRFAEVASPSRPPVFDFGRGRGTIRDEETREWPRKHFYGDYRNCSEGSLNSYKLSNGN 370

Query: 1827 DVDRTRALIDAYGVDKRTDMM--KHPGVEEMQVNGIGTEPT-MAWQNSEEEEFQWENMSP 1657
            +    RALIDAYG D+   M   K   VE + VNG+G + T  +WQN+EEEEF WE+MSP
Sbjct: 371  ERQTLRALIDAYGNDRGQGMSNSKPVQVERLDVNGMGNKVTPRSWQNTEEEEFDWEDMSP 430

Query: 1656 TLADHGRKDVFXXXXXXXXSFRNTASVPPHL---RQDWPNRPQFPAVNGSSIVD--VPSS 1492
            TLAD  R + F         F +  + P  L   R    N+ Q      S+I +  VPS 
Sbjct: 431  TLADR-RSNEFSVSSVAT--FGSIGARPAGLESNRSSRSNQTQLALDESSTIPEDAVPSL 487

Query: 1491 TDGLENTVYAIHRVPTHIQDS---------STHQFNATKVGNNARMPFQGSAILP----- 1354
            + G  + +  I R P + QD+         S+HQ +A   G +  MPF  S I       
Sbjct: 488  SSG--HGLNQIQR-PRYPQDAWSNSYPFSQSSHQLHAKGRGRDFWMPFAASGISSLGGDK 544

Query: 1353 --PNVEQKPS----------------------------------SIGYSPDLNTQNQGQP 1282
              P +E+ P                                   + G  P +N      P
Sbjct: 545  NVPLIEKLPEGGSQFVRPPALVPRSGSSSLDTVTVVTQPAMLPLTAGAWPPVNVHKSQPP 604

Query: 1281 -------FMSRGGSH---ARPMLQAY-QNVNSSSFPDHNLNNTESILQN----PMLPFSG 1147
                       G SH     P+  A  Q  N   +     +N ES  Q+    P LP  G
Sbjct: 605  NAHTNYSLQQHGRSHFDSLNPINAAMNQGQNKHPYMPEQFDNFESKEQSLKTVPQLP--G 662

Query: 1146 QQLGPIPFNQSLVH--------------------TAMLPPHSLPHDMQHHAAPHSVVASV 1027
            Q+  P    ++ +H                    T  LPP  L   M H  +P    AS+
Sbjct: 663  QR--PALQQRNSLHGSLQPHFPPHEARDSFLSSATGPLPPRLLAPSMNHGYSPQMHGASI 720

Query: 1026 GTILPNLYMQVRMPNLNAPNASTXXXXXXXXXXXXXXG----ASHVLPIPQPSYSA-PNP 862
              +  NL + V  P L+ PN  T                   AS ++P  Q +    PN 
Sbjct: 721  SMVPSNL-VPVAQPPLSIPNMPTGSLHLQGGAMPPLPPGPRPASQMMPAAQNAGPLLPNQ 779

Query: 861  PVGGNFSNLFNSLMAQGVISLNQTSAKEDAVGLEFNPDLLKVRHESAVTALYSDLPRQCT 682
            P GG F+ L +SLMAQG+ISL + +  +D+VGLEF+ DLLKVRHESA++ALY+DLPRQCT
Sbjct: 780  PQGGPFTGLISSLMAQGLISLTKPTPIQDSVGLEFDADLLKVRHESAISALYADLPRQCT 839

Query: 681  TCGLRFKLQEAHSSHMDWHVTRNRVTRNRKQKPSRKWFVSDNMWLTGAEALGTDSVPNFL 502
            TCGLRFK QE HS+HMDWHVTRNR+++NRKQKPSRKWFVS +MWL+GAEALGTD+VP FL
Sbjct: 840  TCGLRFKFQEEHSTHMDWHVTRNRMSKNRKQKPSRKWFVSASMWLSGAEALGTDAVPGFL 899

Query: 501  PSEDIVEKKDDEELAVPADDDQKCCALCGEPFDDFFCDERDEWMYKGAVYMNAPGGPAAD 322
            P+EDIVEKKDDEELAV AD+DQ  CALCGEPFDDF+ DE +EWMY+GAVYMNAP G    
Sbjct: 900  PTEDIVEKKDDEELAVSADEDQNLCALCGEPFDDFYSDETEEWMYRGAVYMNAPSGSVEG 959

Query: 321  MDRSQLGPIVHAKCRSETGTV-SEDTKKRDQDFTEEGSQRKRMR 193
            +DRSQLGPIVHAKCRSE+  V  ED  + D    E+ SQRKR+R
Sbjct: 960  IDRSQLGPIVHAKCRSESSVVPPEDFVRYDGGNPEDSSQRKRLR 1003


>XP_009601447.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
            [Nicotiana tomentosiformis]
          Length = 985

 Score =  692 bits (1786), Expect = 0.0
 Identities = 442/994 (44%), Positives = 560/994 (56%), Gaps = 108/994 (10%)
 Frame = -1

Query: 2886 MAISSKXXXXXTISERFREMVKEREEELRVSG-------DDVGL---SGDEIVRLYDILL 2737
            +A   K     +I ERFR  +KEREEELR S        DDV +   + DEIVRLY++ L
Sbjct: 19   VAAPPKPLPSPSIIERFRAALKEREEELRASSMPVVDDDDDVIVLPPTMDEIVRLYELFL 78

Query: 2736 SELSVNSKPIITDLTIIAGEQRMYGAGIADAICCRIIEVPVEQKLPSLYLLDSIVKNIGR 2557
            S+L+ NSKP+ITDLTIIAGEQR +G GIADAIC RI+EVPVEQKLPSLYLLDSIVKNIGR
Sbjct: 79   SDLTFNSKPVITDLTIIAGEQREHGQGIADAICSRILEVPVEQKLPSLYLLDSIVKNIGR 138

Query: 2556 EYIKYFSARLPEVFCDAYKQVHPNVHPAMRHLFGTWSTVFPLSVLRKIESHLQFXXXXXN 2377
            +Y+++FSA LPEVFC+AY+QVHP++HPAMRHLFGTWSTVFP  VLRKIE+ LQF      
Sbjct: 139  DYVRHFSAHLPEVFCEAYRQVHPSMHPAMRHLFGTWSTVFPAPVLRKIETRLQFSQPGPQ 198

Query: 2376 QSLALPPLRASESPRPAHGIHINPKYLEARRQFVNETADS-SVQPPRGVSTISKLSNQNH 2200
            QS  L   RASESPRP HGIH+NPKYLEARRQ  + T DS  V+ P G  +    + Q  
Sbjct: 199  QSSGLTSSRASESPRPTHGIHVNPKYLEARRQLGHSTIDSVRVENPAGHISSDLEAKQVL 258

Query: 2199 STDYEEFISDGDTDVXXXXXXXXXXXXXXXXXXXXXLPPTSSGRIEMSASLYGVGRVGFS 2020
            ST                                       + +   S+S Y VG     
Sbjct: 259  ST---------------------------------------ASKNARSSSPYRVGPARSL 279

Query: 2019 SPSLEHRQMDNSP---GRGASPLDSGIDYRTGGFLGSTARTDDWKRICVPGDSKNHVKTA 1849
            SP+L+   +DNS      GASP  S +DY      G     ++W+RI +P D+       
Sbjct: 280  SPTLDEFAVDNSAIGLREGASPSHSALDYGLNRVRGRDDERNEWQRI-LPDDANQQPDIP 338

Query: 1848 VR--LNNGVDVDRTRALIDAYGVDKRTDMM--KHPGVEEMQVNGIGTEPTM-AWQNSEEE 1684
            V+  LN   D+   RALIDAYG+D+R  ++  +   +    +N +G    +  WQN+EEE
Sbjct: 339  VKYGLNRDFDLQGPRALIDAYGIDEREKLVNQRQRKMGNAAMNSLGERVAVKTWQNTEEE 398

Query: 1683 EFQWENMSPTLADHGRKDVFXXXXXXXXSFR-----NTASVPPHL---RQDWPNRPQFPA 1528
            EF WE+MSPTLAD    +            R     ++  V P +   R+ W NR Q+ +
Sbjct: 399  EFNWEDMSPTLADQSPFNDLSTSVRHPQGIRTRPGLDSQHVVPLVSDPRRSWSNRGQYSS 458

Query: 1527 VNGSSIVDVPSSTDG-----------------------LENTVYAIHRVPTHIQDSST-- 1423
            V+ SS+ DV SS  G                       L   V  +H+    ++ S    
Sbjct: 459  VHDSSLDDVHSSGRGARNKITGYCDETSLISGSPYLQKLPENVPLLHQRHLKVEGSGIVT 518

Query: 1422 ----HQF--NATKVGNNARMPF-------------------QGSAIL---PPNVEQKPSS 1327
                H    N    G+  R P+                    G A +   PP     P S
Sbjct: 519  GEPKHPLISNLVADGHTWRPPYIPPRMNPTFESSVQDIRAVTGRAPIVPWPPTDVHNPQS 578

Query: 1326 IGYSPD-LNTQNQGQPFMSRGGSHA-------RPMLQAYQNVNSSS--------FPDHNL 1195
            +   P  L  Q+   PF  + GS++       +P+L   Q  NS S        FP  + 
Sbjct: 579  LTSKPFVLPHQHIRSPFEVKNGSNSVANHNLDKPVLPGQQIDNSKSNSYIKFPQFPSQHP 638

Query: 1194 NNTESILQNPMLPFSGQQLGPIPFNQSLVHTAMLPPHSLPHDMQ------HHAAPHSVVA 1033
             +  + LQNP    S +    + F+Q + H   +P  SLP          +   P    +
Sbjct: 639  ASFSASLQNPEQVASAES--QLLFSQRM-HQTTVPSASLPASNHFLLPPIYGYNPQGPGS 695

Query: 1032 SVGTILPNLYM--QVRMPNLNAPNASTXXXXXXXXXXXXXXG--ASHVLPIPQP-SYSAP 868
            SVGT+LP      QV +P +N PN S+                 +S   P  Q      P
Sbjct: 696  SVGTLLPLPVSGPQVSLPLVNIPNTSSQFSSGALPPLPRGPLPMSSQFTPTSQNLGQVTP 755

Query: 867  NPPVGGNFSNLFNSLMAQGVISLNQTSAKEDAVGLEFNPDLLKVRHESAVTALYSDLPRQ 688
            NPP GG FS+L +SLMAQG+ISL   +  +D+VGL+FNPDLLKVRH+SAVTALY+DLPRQ
Sbjct: 756  NPPAGG-FSSLISSLMAQGLISLTNEAPPQDSVGLDFNPDLLKVRHDSAVTALYADLPRQ 814

Query: 687  CTTCGLRFKLQEAHSSHMDWHVTRNRVTRNRKQKPSRKWFVSDNMWLTGAEALGTDSVPN 508
            CTTCGLRFK QEAHSSHMDWHVT+NRV++NRKQK SRKWFVS NMW +G EALG+D+ P 
Sbjct: 815  CTTCGLRFKCQEAHSSHMDWHVTKNRVSKNRKQKSSRKWFVSVNMWFSGTEALGSDAAPG 874

Query: 507  FLPSEDIVEKKDDEELAVPADDDQKCCALCGEPFDDFFCDERDEWMYKGAVYMNAPGGPA 328
            FLP+E +VEKKDDEELAVPADD+Q  CALCGEPFDDF+ DE +EWMYKGAVYMNAP G  
Sbjct: 875  FLPAEQVVEKKDDEELAVPADDEQNVCALCGEPFDDFYSDETEEWMYKGAVYMNAPSGST 934

Query: 327  ADMDRSQLGPIVHAKCRSE-TGTVSEDTKKRDQD 229
            A M++SQLGPI+HAKCRSE + T  ED+++ D++
Sbjct: 935  AGMEKSQLGPIIHAKCRSESSATPQEDSRRVDEE 968


>XP_012450328.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
            [Gossypium raimondii] KJB67156.1 hypothetical protein
            B456_010G178200 [Gossypium raimondii]
          Length = 1004

 Score =  692 bits (1787), Expect = 0.0
 Identities = 451/1004 (44%), Positives = 572/1004 (56%), Gaps = 118/1004 (11%)
 Frame = -1

Query: 2850 ISERFREMVKEREEELRVSG---DDVGLSG--DEIVRLYDILLSELSVNSKPIITDLTII 2686
            ISERF+ ++K+RE+ELRVSG   DD G +   +EIV+LY+++LSEL+ NSKPIITDLTII
Sbjct: 15   ISERFKALLKQREDELRVSGGVADDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLTII 74

Query: 2685 AGEQRMYGAGIADAICCRIIEVPVEQKLPSLYLLDSIVKNIGREYIKYFSARLPEVFCDA 2506
            AGEQR +G GIADAIC RIIEVPVEQKLPSLYLLDSIVKNIGREY++YFS+RLPEVFC+A
Sbjct: 75   AGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFCEA 134

Query: 2505 YKQVHPNVHPAMRHLFGTWSTVFPLSVLRKIESHLQFXXXXXNQSLALPPLRASESPRPA 2326
            Y+QV+PN+HPAMRHLFGTWSTVFP SVLRKIE  LQF      QS  +  L++SESPRP 
Sbjct: 135  YRQVNPNLHPAMRHLFGTWSTVFPPSVLRKIEMQLQFSQTGNQQSSGVTSLQSSESPRPT 194

Query: 2325 HGIHINPKYLEARRQFVNET-ADSSVQPPRGVSTISKLSNQNHSTDYEEFISDGDTDVXX 2149
            HGIH+NPKYL   RQF  ++ ADS+ Q  RG+S   KL  Q H+  Y+EF SD  T+V  
Sbjct: 195  HGIHVNPKYL---RQFEQQSGADSNTQHVRGMSAGQKLYGQKHTITYDEFDSD-HTEVPS 250

Query: 2148 XXXXXXXXXXXXXXXXXXXL------PPTSSGRIEMSASLYGVGRVGFSSPSLEHRQMDN 1987
                                        +S+ R+    S   +G     S  ++    D+
Sbjct: 251  SHVGVQRLSSTGNVGCTSLAIGANKSQLSSASRVSRPFSPSRIGSDRLLSSEVDDLPSDD 310

Query: 1986 SPGRGASPLDSG----IDYRTGGFLGSTARTDDWKRICVPGDSKNHVKTAV---RLNNGV 1828
            SP R A           D+  G        T +W R    GD +N  + ++   +L+NG 
Sbjct: 311  SPRRFAEVASPSRPPVFDFGRGRGTIRDEETREWPRKHFYGDYRNCSEGSLNSYKLSNGN 370

Query: 1827 DVDRTRALIDAYGVDKRTDMM--KHPGVEEMQVNGIGTEPT-MAWQNSEEEEFQWENMSP 1657
            +    RALIDAYG D+   M   K   VE + VNG+G + T  +WQN+EEEEF WE+MSP
Sbjct: 371  ERQTLRALIDAYGNDRGQGMSNSKPVQVERLDVNGMGNKVTPRSWQNTEEEEFDWEDMSP 430

Query: 1656 TLADHGRKDVFXXXXXXXXSFRNTASVPPHL---RQDWPNRPQFPAVNGSSIVD--VPSS 1492
            TLAD  R + F         F +  + P  L   R    N+ Q      S+I +  VPS 
Sbjct: 431  TLADR-RSNEFSVSSVAT--FGSIGARPAGLESNRSSRSNQTQLALDESSTIPEDAVPSL 487

Query: 1491 TDGLENTVYAIHRVPTHIQDS---------STHQFNATKVGNNARMPFQGSA-------- 1363
            + G  + +  I R P + QD+         S+HQ +A   G +  +PF  S         
Sbjct: 488  SSG--HGLNQIQR-PRYPQDAWSNSYPFSQSSHQLHAKGRGRDFWIPFSASGISSLGGEK 544

Query: 1362 ---------------ILPPNVEQK------------------PSSIGYSPDLNTQNQGQP 1282
                           + PP +  +                  P + G  P +N      P
Sbjct: 545  NVPLIEKLPEGGSQFVRPPALVPRSGSSSLDTVTVVTQPAMLPLTAGAWPPVNVPKSQPP 604

Query: 1281 -------FMSRGGSH---ARPMLQAY-QNVNSSSFPDHNLNNTESILQN----PMLPFSG 1147
                       G SH     P+  A  Q  N   +     +N ES  Q+    P LP  G
Sbjct: 605  NAHTNYSLQQHGRSHFDSLNPINAAMNQGQNKHPYMPEQFDNFESKEQSLKTVPQLP--G 662

Query: 1146 QQLGPIPFNQSLVH--------------------TAMLPPHSLPHDMQHHAAPHSVVASV 1027
            Q+  P    ++ +H                    T  LPP  L   M H  +P    A +
Sbjct: 663  QR--PALQQRNSLHGSLQPHFPPNDARDSFLSSATGPLPPRLLAPSMNHGYSPQMHGAGI 720

Query: 1026 GTILPNLYMQVRMPNLNAPNASTXXXXXXXXXXXXXXGA----SHVLPIPQPSYSA-PNP 862
             +++P+  + V  P L+ PN  T                    S ++P  Q +    PN 
Sbjct: 721  -SMVPSNPIPVAQPPLSIPNMPTGSLHLQGGAMPPLPPGPRPTSQMMPAAQNAGPLLPNQ 779

Query: 861  PVGGNFSNLFNSLMAQGVISLNQTSAKEDAVGLEFNPDLLKVRHESAVTALYSDLPRQCT 682
            P GG F+ L +SLMAQG+ISL + +  +D+VGLEF+ DLLKVRHESA++ALY+DLPRQCT
Sbjct: 780  PQGGPFTGLISSLMAQGLISLTKPTPIQDSVGLEFDADLLKVRHESAISALYADLPRQCT 839

Query: 681  TCGLRFKLQEAHSSHMDWHVTRNRVTRNRKQKPSRKWFVSDNMWLTGAEALGTDSVPNFL 502
            TCGLRFK QE HS+HMDWHVTRNR+++NRKQKPSRKWFVS +MWL+GAEALGTD+VP FL
Sbjct: 840  TCGLRFKFQEEHSTHMDWHVTRNRMSKNRKQKPSRKWFVSASMWLSGAEALGTDAVPGFL 899

Query: 501  PSEDIVEKKDDEELAVPADDDQKCCALCGEPFDDFFCDERDEWMYKGAVYMNAPGGPAAD 322
            P+EDIVEKKDDEELAVPAD+DQ  CALCGEPFDDF+ DE +EWMY+GAVYMNAP G    
Sbjct: 900  PTEDIVEKKDDEELAVPADEDQNLCALCGEPFDDFYSDETEEWMYRGAVYMNAPNGSVEG 959

Query: 321  MDRSQLGPIVHAKCRSETGTV-SEDTKKRDQDFTEEGSQRKRMR 193
            +DRSQLGPIVHAKCRSE+  V  ED  + D    E+ SQRKR+R
Sbjct: 960  IDRSQLGPIVHAKCRSESSVVPPEDFVRYDGGNPEDSSQRKRLR 1003


>XP_019257117.1 PREDICTED: polyadenylation and cleavage factor homolog 4 [Nicotiana
            attenuata] OIS96062.1 polyadenylation and cleavage factor
            -like 4 [Nicotiana attenuata]
          Length = 982

 Score =  691 bits (1784), Expect = 0.0
 Identities = 441/1012 (43%), Positives = 563/1012 (55%), Gaps = 108/1012 (10%)
 Frame = -1

Query: 2904 PLQMNTM-AISSKXXXXXTISERFREMVKEREEELRVSG-------DDVGL---SGDEIV 2758
            P+Q + + A   K     +I ERFR  +KEREEELR S        DDV +   + DEIV
Sbjct: 12   PIQNDAVVAAPPKPLPSPSIIERFRAALKEREEELRASSMPVIDDDDDVIVLPPTMDEIV 71

Query: 2757 RLYDILLSELSVNSKPIITDLTIIAGEQRMYGAGIADAICCRIIEVPVEQKLPSLYLLDS 2578
            RLY++ LS+L+ NSKP+ITDLTIIAGEQR +G GIADAIC RI+EVPVEQKLPSLYLLDS
Sbjct: 72   RLYELFLSDLTFNSKPVITDLTIIAGEQREHGQGIADAICSRILEVPVEQKLPSLYLLDS 131

Query: 2577 IVKNIGREYIKYFSARLPEVFCDAYKQVHPNVHPAMRHLFGTWSTVFPLSVLRKIESHLQ 2398
            IVKNIGR+Y+++FSA LPEVFC+AY+QVHP++HPAMRHLFGTWSTVFP  VLRKIE+ LQ
Sbjct: 132  IVKNIGRDYVRHFSAHLPEVFCEAYRQVHPSMHPAMRHLFGTWSTVFPAPVLRKIETRLQ 191

Query: 2397 FXXXXXNQSLALPPLRASESPRPAHGIHINPKYLEARRQFVNETADSSVQPPRGVSTISK 2218
            F      QS  L   RASESPRP HGIH+NPKYLEARRQ  + T DS       V   + 
Sbjct: 192  FSQSGAQQSSGLTSSRASESPRPTHGIHVNPKYLEARRQLGHSTIDS-------VRAENL 244

Query: 2217 LSNQNHSTDYEEFISDGDTDVXXXXXXXXXXXXXXXXXXXXXLPPTSSGRIEMSASLYGV 2038
              + +   + ++ +S                               ++ +   S+S Y V
Sbjct: 245  AGHISSDLEAKQVLS-------------------------------TASKNARSSSPYRV 273

Query: 2037 GRVGFSSPSLEHRQMDNSP---GRGASPLDSGIDYRTGGFLGSTARTDDWKRICVPGDSK 1867
            G     SP+L+   +DNS      GASP  S +DY      G     ++W+RI +P D+ 
Sbjct: 274  GPARSLSPTLDEFAVDNSAIGLREGASPSHSALDYGLNRVRGRDDERNEWQRI-LPDDAN 332

Query: 1866 NHVKTAVR--LNNGVDVDRTRALIDAYGVDKRTDM--MKHPGVEEMQVNGIGTEPTM-AW 1702
                  V+  LN   D+   RALIDAYG+D+R  +   +   +    +NG+G    +  W
Sbjct: 333  QQPDIPVKYGLNKDFDLQGPRALIDAYGIDEREKLANQRQRKMGNAAMNGLGERIAVKTW 392

Query: 1701 QNSEEEEFQWENMSPTLADHGRKDVFXXXXXXXXSFRNTASVPPHL--------RQDWPN 1546
            QN+EEEEF WE+MSPTL D    +          S R    +            R+ W N
Sbjct: 393  QNTEEEEFNWEDMSPTLVDQSPFNDLSTSVRHPQSIRTRPGLDSQHAVPLVTDPRRSWSN 452

Query: 1545 RPQFPAVNGSSIVDVPSSTDG-----------------------LENTVYAIHRVPTHIQ 1435
            R Q+ +V+  S+ DV SS  G                       L   V  +H+    ++
Sbjct: 453  RGQYSSVHDPSLDDVHSSGRGARNKITGYCDETSLISGSHYLQKLPENVPLLHQRHLKVE 512

Query: 1434 DSSTHQF----------NATKVGNNARMPF-------------------QGSAIL---PP 1351
             S               N    G+  R P+                    G A +   PP
Sbjct: 513  GSGISLVTGEPKHPLISNLVADGHTWRPPYIPPRMNPTFDSSVQDIRAVTGRAPIVPWPP 572

Query: 1350 NVEQKPSSIGYSPD-LNTQNQGQPFMSRGGSHA-------RPMLQAYQNVNSSS------ 1213
                 P S+   P  L  Q+   PF  +  S +       + +L   +  NS S      
Sbjct: 573  TDVHNPQSLTSKPFVLPHQHIRSPFEVKNASSSVVNHNLDKSVLPGQRIDNSKSNSYIKF 632

Query: 1212 --FPDHNLNNTESILQNP--MLPFSGQQLGPIPFNQSLVHTAMLPPHS---LPHDMQHHA 1054
              FP  +L +  + LQN   + P   Q L     +Q+ V +A +P  +   LP    ++ 
Sbjct: 633  PQFPSQHLASFSASLQNSEQVAPAESQLLFSQRMHQTTVPSASIPASNHLLLPPIYGYN- 691

Query: 1053 APHSVVASVGTILPNLYM--QVRMPNLNAPNASTXXXXXXXXXXXXXXG--ASHVLPIPQ 886
             P    +SVGT+LP      QV +P +N PN S+                 +S   P  Q
Sbjct: 692  -PQGPGSSVGTLLPLPVSGPQVSLPLVNIPNTSSQFSSGAFPPLPRGPLPMSSQFTPTSQ 750

Query: 885  P-SYSAPNPPVGGNFSNLFNSLMAQGVISLNQTSAKEDAVGLEFNPDLLKVRHESAVTAL 709
                  PNPP GG FS+L +SLMAQG+ISL   +  +D+VGL+FNPDLLKVRH+SAVTAL
Sbjct: 751  NLGQVTPNPPAGG-FSSLISSLMAQGLISLTNQAPPQDSVGLDFNPDLLKVRHDSAVTAL 809

Query: 708  YSDLPRQCTTCGLRFKLQEAHSSHMDWHVTRNRVTRNRKQKPSRKWFVSDNMWLTGAEAL 529
            Y+DLPRQC TCGLRFK QEAHSSHMDWHVT+NRV++NRKQK SRKWFVS NMWL+G EAL
Sbjct: 810  YADLPRQCKTCGLRFKCQEAHSSHMDWHVTKNRVSKNRKQKSSRKWFVSVNMWLSGTEAL 869

Query: 528  GTDSVPNFLPSEDIVEKKDDEELAVPADDDQKCCALCGEPFDDFFCDERDEWMYKGAVYM 349
            G+D+ P FLP+E +VEKKDDEELAVPADD+Q  CALCGEPFDDF+ DE +EWMYKGAVYM
Sbjct: 870  GSDAAPGFLPTEQVVEKKDDEELAVPADDEQNVCALCGEPFDDFYSDETEEWMYKGAVYM 929

Query: 348  NAPGGPAADMDRSQLGPIVHAKCRSETGTVSEDTKKRDQDFTEEGSQRKRMR 193
            NAP G  A M +SQLGPI+HAKCRSE+     +  +R  +  E+GSQRKRMR
Sbjct: 930  NAPSGSTAGMKKSQLGPIIHAKCRSESSATPHEDSRRVDEGLEDGSQRKRMR 981


>XP_016550983.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
            [Capsicum annuum]
          Length = 968

 Score =  691 bits (1782), Expect = 0.0
 Identities = 431/993 (43%), Positives = 553/993 (55%), Gaps = 107/993 (10%)
 Frame = -1

Query: 2850 ISERFREMVKEREEELRVS----GDDVGL---SGDEIVRLYDILLSELSVNSKPIITDLT 2692
            I +R+R  ++EREEE+R +     DDV +   + +EIVRLYD+LLSEL+ NSKPIITDLT
Sbjct: 20   IIDRYRAALREREEEIRATMPEEDDDVIVLPPNMEEIVRLYDLLLSELTFNSKPIITDLT 79

Query: 2691 IIAGEQRMYGAGIADAICCRIIEVPVEQKLPSLYLLDSIVKNIGREYIKYFSARLPEVFC 2512
            IIAGEQ+ +  GIADAIC RI+E PVEQKLPSLYLLDSIVKNIGR+Y+++FSA LPEVFC
Sbjct: 80   IIAGEQQEHAEGIADAICGRILEAPVEQKLPSLYLLDSIVKNIGRDYVRHFSAHLPEVFC 139

Query: 2511 DAYKQVHPNVHPAMRHLFGTWSTVFPLSVLRKIESHLQFXXXXXNQSLALPPLRASESPR 2332
            +AY+QVHP++H AMRHLFGTWSTVFP  VLRKIE+HLQF      QS  L   RASESPR
Sbjct: 140  EAYRQVHPSMHSAMRHLFGTWSTVFPAPVLRKIETHLQFSQPGIQQSSGLTSSRASESPR 199

Query: 2331 PAHGIHINPKYLEARRQFVNETADSSVQPPRGVSTISKLSNQNHSTDYE--EFISDGDTD 2158
            P HGIH+NPKYLEARRQ  + T DS+          ++ S  + S+D E  + +S    +
Sbjct: 200  PTHGIHVNPKYLEARRQLGHSTIDSAR---------AENSTGHTSSDLEARQVLSTASKN 250

Query: 2157 VXXXXXXXXXXXXXXXXXXXXXLPPTSSGRIEMSASLYGVGRVGFSSPSLEHRQMDNSP- 1981
            V                                S+S Y VG     SP+L+   +DNS  
Sbjct: 251  VR-------------------------------SSSPYRVGPPRSLSPTLDEFAVDNSAI 279

Query: 1980 --GRGASPLDSGIDYRTGGFLGSTARTDDWKRICVPGDSKNHVKTAVR--LNNGVDVDRT 1813
                GASP    +DY      G      +W+RI +P D+       V+  +N G+D+   
Sbjct: 280  GLREGASPSHPALDYGLNRVRGRDDERSEWQRI-LPDDANQQPDIPVKYSVNKGIDLQGH 338

Query: 1812 RALIDAYGVDKRTDMM--KHPGVEEMQVNGIGTEPTM-AWQNSEEEEFQWENMSPTLADH 1642
            RALIDAYG+D+R  +   +   +    +NG+G    +  WQN+EEEEF WE+MSPTLAD 
Sbjct: 339  RALIDAYGIDEREKLFNQRQQKIGNATINGLGGRLAVKTWQNTEEEEFNWEDMSPTLADQ 398

Query: 1641 GRKDVFXXXXXXXXSFR--------NTASVPPHLRQDWPNRPQFPAVNGSSIVDVPSSTD 1486
               +          S R        +T  +    R+ W +R Q+  V+  S+ DV SS  
Sbjct: 399  NPFNDLSTSLRHPQSIRMRPGVDSQHTVPLVTDPRRSWSHRGQYSLVHDPSLDDVHSSGR 458

Query: 1485 GLENTV-------------YAIHRVPTHIQD------------------SSTHQF--NAT 1405
            G  N +             + + ++P ++                     S H    N  
Sbjct: 459  GARNKITGYCDETSLISGSHYLQKLPENVPQLPQRHLKGEGSGISSATGESKHPLISNLA 518

Query: 1404 KVGNNARMPFQ--------------------GSAIL---PPNVEQKPSSIGYSPDLNTQN 1294
              G+  R P+                     G A +   PP     P  +   P L   +
Sbjct: 519  ADGHTWRPPYAPPPRMNSTFDPPVQDIRVVTGRAPVVPWPPTSVHNPQYLASKPVLPHNH 578

Query: 1293 QGQPFMSRGGSHA-------RPML--QAYQNVNSSS------FPDHNLNNTESILQNPML 1159
               PF  +  S++       RP+L  Q   N+ SSS      FP  +  +  +  QNP  
Sbjct: 579  ISSPFEVKNTSNSVVNHILDRPVLPEQHNDNLKSSSYAKFPQFPGQHPTSFSASHQNPEQ 638

Query: 1158 PFSGQQLGPIPFNQSLVHTAMLPPHSLPHDMQ------HHAAPHSVVASVGTILPNLYM- 1000
              S +   P       +H    P  SLP          +   P    +S+GT+ P     
Sbjct: 639  MASAE---PQLLLSQRIHQTTPPSASLPSSNHLLLPPIYRYPPPGPGSSIGTLFPRPVPA 695

Query: 999  -QVRMPNLNAPNASTXXXXXXXXXXXXXXGASHVLPIPQPSYSAP---NPPVGGNFSNLF 832
             QV MP +N PN S+                     +P     AP   NPP GG FS+L 
Sbjct: 696  PQVSMPLVNVPNTSSQFSSGALPPLPRGPLPMSFQFMPTSQNLAPVTPNPPAGG-FSSLI 754

Query: 831  NSLMAQGVISLNQTSAKEDAVGLEFNPDLLKVRHESAVTALYSDLPRQCTTCGLRFKLQE 652
            +SLMAQG+ISL   +  +D+VGL+FNPDLLKVRH+SAVTALY+DLPRQCTTCGLRFK QE
Sbjct: 755  SSLMAQGLISLTNQAPAQDSVGLDFNPDLLKVRHDSAVTALYADLPRQCTTCGLRFKCQE 814

Query: 651  AHSSHMDWHVTRNRVTRNRKQKPSRKWFVSDNMWLTGAEALGTDSVPNFLPSEDIVEKKD 472
            +HSSHMDWHVT+NRV++NRKQK SRKWFVS NMWL+G EALG+D+VP FLP+E +VE KD
Sbjct: 815  SHSSHMDWHVTKNRVSKNRKQKSSRKWFVSVNMWLSGTEALGSDAVPGFLPTEQVVETKD 874

Query: 471  DEELAVPADDDQKCCALCGEPFDDFFCDERDEWMYKGAVYMNAPGGPAADMDRSQLGPIV 292
            DEELAVPADD+Q  CALCGEPFDDF+ DE +EWMY+G VYMNAP G    M+RSQLGPI+
Sbjct: 875  DEELAVPADDEQNACALCGEPFDDFYSDETEEWMYRGTVYMNAPSGSTVGMERSQLGPII 934

Query: 291  HAKCRSETGTVSEDTKKRDQDFTEEGSQRKRMR 193
            HAKCRSE+     +  +R  +  E+GSQRKRMR
Sbjct: 935  HAKCRSESSATPYEDSRRVDEGQEDGSQRKRMR 967


>XP_019195955.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X1 [Ipomoea nil]
          Length = 933

 Score =  689 bits (1777), Expect = 0.0
 Identities = 423/958 (44%), Positives = 540/958 (56%), Gaps = 72/958 (7%)
 Frame = -1

Query: 2850 ISERFREMVKEREEELRVSGDDVGLSG---DEIVRLYDILLSELSVNSKPIITDLTIIAG 2680
            I +RF+ M+KE +EE+RVS +D G+S    D +VRLY+I+LSEL+ NSKPIIT+LTIIAG
Sbjct: 39   ILDRFKTMLKEPDEEVRVSLEDGGISPSTMDMVVRLYEIVLSELTFNSKPIITELTIIAG 98

Query: 2679 EQRMYGAGIADAICCRIIEVPVEQKLPSLYLLDSIVKNIGREYIKYFSARLPEVFCDAYK 2500
            EQR +G GIA+AIC RI+E PVE KLPSLYLLDSIVKNIGREYI++FSARLPEVFC+AY+
Sbjct: 99   EQREHGQGIANAICARILEAPVEHKLPSLYLLDSIVKNIGREYIRHFSARLPEVFCEAYR 158

Query: 2499 QVHPNVHPAMRHLFGTWSTVFPLSVLRKIESHLQFXXXXXNQSLALPPLRASESPRPAHG 2320
            QV PN+  A+RHLFGTWSTVFP SVLRKIE+ LQF     +QS  L  LRASESPRP HG
Sbjct: 159  QVQPNMFAALRHLFGTWSTVFPSSVLRKIEACLQFSPSTSHQSSGLTNLRASESPRPGHG 218

Query: 2319 IHINPKYLEARRQFVNETADSSVQPPRGVSTISKLSNQNHSTDYEEFISDGDTDVXXXXX 2140
            IH+NPKYLEARRQ V            G STI+ +  +  S+     +   D D      
Sbjct: 219  IHVNPKYLEARRQLV------------GHSTINAVGAEKLSSTGRAGLISSDIDAVKLL- 265

Query: 2139 XXXXXXXXXXXXXXXXLPPTSSGRIEMSASLYGVGRVGFSSPSLEHRQMDNSP--GRGAS 1966
                              PT++ R    +S +GVGR    SP ++   +++SP      S
Sbjct: 266  ------------------PTAAARTVRPSSPFGVGRARSLSPPVDDFAVESSPQISERPS 307

Query: 1965 PLDSGIDYRTGGFLGSTARTDDWKRICVPGDSKNHVKTAVR--LNNGVDVDRTRALIDAY 1792
            P  S IDY   G +     T DW R  +  DS   ++ +V   +  G+D+   RALIDAY
Sbjct: 308  PSHSRIDYGLNGVMAGDDETIDWHRNLLHDDSSQRLENSVAYSVKKGIDLQGPRALIDAY 367

Query: 1791 GVDKRTDMMK--HPGVEEMQVNGIGTEPTM-AWQNSEEEEFQWENMSPTLADHGRKDVFX 1621
            G+D+R       H  + +   NGIG    +  WQN+EEEEF WE+MSPTL D  R++ F 
Sbjct: 368  GIDEREKAFNYHHHKLGQPDANGIGKRVGVKTWQNTEEEEFNWEDMSPTLGDPSRRNDF- 426

Query: 1620 XXXXXXXSFRNTASVPPHLRQDWPNRPQFPAVNGSSIVDVPSSTDGLENTVYAIHRVPTH 1441
                       ++S+PP  R           + G S+        G    + AI+     
Sbjct: 427  -----------SSSMPPSRR----------FITGPSV--------GSLQAISAINDSRRS 457

Query: 1440 IQDSSTHQFNATKVGNNARMP---FQGSAILPPNVEQKPSSIGYSPDLNTQNQGQPFMSR 1270
            + D + H    +  G  +++P    + S I  P+  Q+P    + P    Q         
Sbjct: 458  LSDQAQHSLVKSGRGITSKIPGFYEEASLISAPSYSQEPQ---FLPQDFPQQSHHRIRVE 514

Query: 1269 GGSHARPML-------------------------------QAYQNVN---SSSFPDHNLN 1192
            GG  A  ML                                    VN   +SS  D    
Sbjct: 515  GGGRAPSMLSGTGLSTKVGEQKLHLVGNLTTANGKFWRPPSVASRVNPGFNSSVQDVQAV 574

Query: 1191 NT-------ESILQNPMLPFSGQQLGPIPFNQSLVHTAMLPPHSLP-HD-MQHHAAPHSV 1039
            NT        +I  + +  F  Q  G +P N        L    LP HD +Q+   P ++
Sbjct: 575  NTGLSTGAWPTISMHNLPRFPVQHPGAVPLNHQRSGQMSLSQPQLPCHDVLQNKVPPAAI 634

Query: 1038 VASVGTILPNLY------------MQVRMPNLNAPNAST--XXXXXXXXXXXXXXGASHV 901
                 T++P               +Q  +P +N PN S                  A  +
Sbjct: 635  AVPTHTLMPPSNYGYTPQGQGVSGVQSTLPMVNIPNTSLQFTGAALAPIARVPTPAAPQM 694

Query: 900  LPIPQPS-YSAPNPPVGGNFSNLFNSLMAQGVISLNQTSAKEDAVGLEFNPDLLKVRHES 724
            +P  QPS     + P GG FSNL N+LMAQG+ISL+  +  ED+VG EFN +LLK RHES
Sbjct: 695  MPTLQPSGQGTQSAPQGGTFSNLINTLMAQGLISLSNQAPPEDSVGTEFNMELLKERHES 754

Query: 723  AVTALYSDLPRQCTTCGLRFKLQEAHSSHMDWHVTRNRVTRNRKQKPSRKWFVSDNMWLT 544
             +TALYS LPRQC TCGLRFK Q+AHSSHMDWHVT+NR+++NRK  PSRKWFVS +MWL+
Sbjct: 755  TITALYSALPRQCKTCGLRFKSQDAHSSHMDWHVTKNRLSKNRKHNPSRKWFVSLSMWLS 814

Query: 543  GAEALGTDSVPNFLPSEDIVEKKDDEELAVPADDDQKCCALCGEPFDDFFCDERDEWMYK 364
             AEALGTD+VP FLP ED+VEKKDD+ELAVPADD+Q  CALCGEPFDDF+ DE +EWMY+
Sbjct: 815  SAEALGTDAVPGFLPLEDVVEKKDDDELAVPADDEQNACALCGEPFDDFYSDETEEWMYR 874

Query: 363  GAVYMNAPGGPAADMDRSQLGPIVHAKCRSE-TGTVSEDTKKRDQDFTEEGSQRKRMR 193
            GAVYMNAP G    MDRSQLGPIVHAKCRSE + +  E +KK D+ +T++G  RKRMR
Sbjct: 875  GAVYMNAPTGSTTGMDRSQLGPIVHAKCRSESSSSCIEASKKHDEGYTDDGGLRKRMR 932


>XP_019195956.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X2 [Ipomoea nil]
          Length = 931

 Score =  687 bits (1774), Expect = 0.0
 Identities = 423/944 (44%), Positives = 546/944 (57%), Gaps = 58/944 (6%)
 Frame = -1

Query: 2850 ISERFREMVKEREEELRVSGDDVGLSG---DEIVRLYDILLSELSVNSKPIITDLTIIAG 2680
            I +RF+ M+KE +EE+RVS +D G+S    D +VRLY+I+LSEL+ NSKPIIT+LTIIAG
Sbjct: 39   ILDRFKTMLKEPDEEVRVSLEDGGISPSTMDMVVRLYEIVLSELTFNSKPIITELTIIAG 98

Query: 2679 EQRMYGAGIADAICCRIIEVPVEQKLPSLYLLDSIVKNIGREYIKYFSARLPEVFCDAYK 2500
            EQR +G GIA+AIC RI+E PVE KLPSLYLLDSIVKNIGREYI++FSARLPEVFC+AY+
Sbjct: 99   EQREHGQGIANAICARILEAPVEHKLPSLYLLDSIVKNIGREYIRHFSARLPEVFCEAYR 158

Query: 2499 QVHPNVHPAMRHLFGTWSTVFPLSVLRKIESHLQFXXXXXNQSLALPPLRASESPRPAHG 2320
            QV PN+  A+RHLFGTWSTVFP SVLRKIE+ LQF     +QS  L  LRASESPRP HG
Sbjct: 159  QVQPNMFAALRHLFGTWSTVFPSSVLRKIEACLQFSPSTSHQSSGLTNLRASESPRPGHG 218

Query: 2319 IHINPKYLEARRQFVNETADSSVQPPRGVSTISKLSNQNHSTDYEEFISDGDTDVXXXXX 2140
            IH+NPKYLEARRQ V            G STI+ +  +  S+     +   D D      
Sbjct: 219  IHVNPKYLEARRQLV------------GHSTINAVGAEKLSSTGRAGLISSDIDAVKLL- 265

Query: 2139 XXXXXXXXXXXXXXXXLPPTSSGRIEMSASLYGVGRVGFSSPSLEHRQMDNSP--GRGAS 1966
                              PT++ R    +S +GVGR    SP ++   +++SP      S
Sbjct: 266  ------------------PTAAARTVRPSSPFGVGRARSLSPPVDDFAVESSPQISERPS 307

Query: 1965 PLDSGIDYRTGGFLGSTARTDDWKRICVPGDSKNHVKTAVR--LNNGVDVDRTRALIDAY 1792
            P  S IDY   G +     T DW R  +  DS   ++ +V   +  G+D+   RALIDAY
Sbjct: 308  PSHSRIDYGLNGVMAGDDETIDWHRNLLHDDSSQRLENSVAYSVKKGIDLQGPRALIDAY 367

Query: 1791 GVDKRTDMMK--HPGVEEMQVNGIGTEPTM-AWQNSEEEEFQWENMSPTLADHGRKDVFX 1621
            G+D+R       H  + +   NGIG    +  WQN+EEEEF WE+MSPTL D  R++ F 
Sbjct: 368  GIDEREKAFNYHHHKLGQPDANGIGKRVGVKTWQNTEEEEFNWEDMSPTLGDPSRRNDF- 426

Query: 1620 XXXXXXXSFRNTASVPPHLR----QDWPNRPQFPAVNGS--SIVDVPS---STDGLENTV 1468
                       ++S+PP  R        +     A+N S  S+ D      S  G+ + +
Sbjct: 427  -----------SSSMPPSRRFITGPSVGSLQAISAINDSRRSLSDQAQHSLSGRGITSKI 475

Query: 1467 YAIHR------VPTHIQD---------SSTHQFNATKVGNNARMPFQGSAILPPNVEQKP 1333
               +        P++ Q+           +H     + G  A     G+ +     EQK 
Sbjct: 476  PGFYEEASLISAPSYSQEPQFLPQDFPQQSHHRIRVEGGGRAPSMLSGTGLSTKVGEQKL 535

Query: 1332 SSIGYSPDLNTQNQGQPFM-SRGGSHARPMLQAYQNVN----SSSFPDHNLNNTESILQN 1168
              +G     N +    P + SR        +Q  Q VN    + ++P  +++N       
Sbjct: 536  HLVGNLTTANGKFWRPPSVASRVNPGFNSSVQDVQAVNTGLSTGAWPTISMHN------- 588

Query: 1167 PMLP-FSGQQLGPIPFNQSLVHTAMLPPHSLP-HD-MQHHAAPHSVVASVGTILPNLY-- 1003
              LP F  Q  G +P N        L    LP HD +Q+   P ++     T++P     
Sbjct: 589  --LPRFPVQHPGAVPLNHQRSGQMSLSQPQLPCHDVLQNKVPPAAIAVPTHTLMPPSNYG 646

Query: 1002 ----------MQVRMPNLNAPNAST--XXXXXXXXXXXXXXGASHVLPIPQPS-YSAPNP 862
                      +Q  +P +N PN S                  A  ++P  QPS     + 
Sbjct: 647  YTPQGQGVSGVQSTLPMVNIPNTSLQFTGAALAPIARVPTPAAPQMMPTLQPSGQGTQSA 706

Query: 861  PVGGNFSNLFNSLMAQGVISLNQTSAKEDAVGLEFNPDLLKVRHESAVTALYSDLPRQCT 682
            P GG FSNL N+LMAQG+ISL+  +  ED+VG EFN +LLK RHES +TALYS LPRQC 
Sbjct: 707  PQGGTFSNLINTLMAQGLISLSNQAPPEDSVGTEFNMELLKERHESTITALYSALPRQCK 766

Query: 681  TCGLRFKLQEAHSSHMDWHVTRNRVTRNRKQKPSRKWFVSDNMWLTGAEALGTDSVPNFL 502
            TCGLRFK Q+AHSSHMDWHVT+NR+++NRK  PSRKWFVS +MWL+ AEALGTD+VP FL
Sbjct: 767  TCGLRFKSQDAHSSHMDWHVTKNRLSKNRKHNPSRKWFVSLSMWLSSAEALGTDAVPGFL 826

Query: 501  PSEDIVEKKDDEELAVPADDDQKCCALCGEPFDDFFCDERDEWMYKGAVYMNAPGGPAAD 322
            P ED+VEKKDD+ELAVPADD+Q  CALCGEPFDDF+ DE +EWMY+GAVYMNAP G    
Sbjct: 827  PLEDVVEKKDDDELAVPADDEQNACALCGEPFDDFYSDETEEWMYRGAVYMNAPTGSTTG 886

Query: 321  MDRSQLGPIVHAKCRSE-TGTVSEDTKKRDQDFTEEGSQRKRMR 193
            MDRSQLGPIVHAKCRSE + +  E +KK D+ +T++G  RKRMR
Sbjct: 887  MDRSQLGPIVHAKCRSESSSSCIEASKKHDEGYTDDGGLRKRMR 930


>XP_015061482.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
            [Solanum pennellii]
          Length = 976

 Score =  687 bits (1773), Expect = 0.0
 Identities = 442/1015 (43%), Positives = 566/1015 (55%), Gaps = 107/1015 (10%)
 Frame = -1

Query: 2916 YKPTPLQMNTMAISSKXXXXXTISERFREMVKEREEELRVS---GDDVGL----SGDEIV 2758
            Y  + L  N  A++       ++ ER++  +KERE E+R S   GDD  +    S +EIV
Sbjct: 7    YANSKLIQNDAAVAPPKPLSSSVIERYKSALKEREIEIRASMQGGDDDVIVLPPSMNEIV 66

Query: 2757 RLYDILLSELSVNSKPIITDLTIIAGEQRMYGAGIADAICCRIIEVPVEQKLPSLYLLDS 2578
            RLY++LLSEL+ NSKPIITDLTIIAGEQR +G GIA AIC RI+EVPVEQKLP+LYLLDS
Sbjct: 67   RLYEMLLSELAFNSKPIITDLTIIAGEQREHGEGIAHAICNRILEVPVEQKLPALYLLDS 126

Query: 2577 IVKNIGREYIKYFSARLPEVFCDAYKQVHPNVHPAMRHLFGTWSTVFPLSVLRKIESHLQ 2398
            +VKNIG++YIK+FSA LPEVFC+AY+QVHP++HPAMRHLFGTWSTVFP  VL+KIE+ LQ
Sbjct: 127  VVKNIGKDYIKHFSAHLPEVFCEAYRQVHPSMHPAMRHLFGTWSTVFPAPVLQKIETRLQ 186

Query: 2397 FXXXXXNQSLALPPLRASESPRPAHGIHINPKYLEARRQFVNETADSSVQPPRGVSTISK 2218
            F      QS  L   RASESPRPAHGIHINPKYLEARRQ  + T DS       V   + 
Sbjct: 187  FSQPGVQQSSGLTSSRASESPRPAHGIHINPKYLEARRQLGHSTIDS-------VRAENS 239

Query: 2217 LSNQNHSTDYEEFISDGDTDVXXXXXXXXXXXXXXXXXXXXXLPPTSSGRIEMSASLYGV 2038
              + +   + ++ +S                               +S +   S+S Y V
Sbjct: 240  TGHISSDLEAKQVLS-------------------------------TSSKNARSSSPYRV 268

Query: 2037 GRVGFSSPSLEHRQMDNSPGRG----ASPLDSGIDYRTGGFLGSTARTDDWKRICVPGDS 1870
            G     SP+L    +DN P  G    ASP  + +DY      G      +W+RI   G +
Sbjct: 269  GPPRSLSPTLNEFALDN-PAIGLRERASPSHTALDYGFSRVRGRDVERSEWQRILPDGAN 327

Query: 1869 KN-HVKTAVRLNNGVDVDRTRALIDAYGVDKRTDM--MKHPGVEEMQVNGIGTEPTM-AW 1702
            +   V    R+N G+D+   RALIDAYG+D+R  +  ++        +NG+G    +  W
Sbjct: 328  QQPDVPPKYRMNKGIDLQGPRALIDAYGIDEREKVAHLRQQKTGNATINGLGNRLAVKTW 387

Query: 1701 QNSEEEEFQWENMSPTLADHGRKDVFXXXXXXXXSFRNTASVPPHL--------RQDWPN 1546
            QN+EEEEF WE+MSPTLAD    +          S R    V            R++W N
Sbjct: 388  QNTEEEEFNWEDMSPTLADQSPFNDLSASLRHPQSIRMRPCVDSQHAGPLVADPRRNWAN 447

Query: 1545 RPQFPAVNGSSIVDVPSSTDGLENTV-------------YAIHRVPTHIQD--------- 1432
            R Q+  V+ SS+ DV SS  G  N +             + + ++P ++           
Sbjct: 448  RGQYSLVHDSSVDDVHSSGRGARNKITGYCDETSLISGSHYLQKLPENVPQLPLRHLKGE 507

Query: 1431 -----SSTHQFNATKVGNNA------RMPF---------------------QGSAI-LPP 1351
                 S T +     +GN A      R P+                     +G  +  PP
Sbjct: 508  GSGISSVTGESKHPLIGNLAADGHTWRPPYVPPRMNPTFDSSVQDVRVVTGRGPGVPWPP 567

Query: 1350 NVEQKPSSIGYSPDLNTQNQGQ-PFMSRGGSHA-------RPML--QAYQNVNSSS---- 1213
                 P S+   P +   N  + P+     S++       RP+L  Q   N+ SSS    
Sbjct: 568  QNVHTPHSLTSKPVVLPHNHVRSPYEVNNASNSVVNHTLDRPVLPEQHIDNLKSSSHIKF 627

Query: 1212 --FPDHNLNNTESILQNPMLPFSGQQLGPIPFNQSLVHTAMLPPHSLPHDMQHHAAPHSV 1039
              FP  +  +  +  QN     S +   P       +H  M P  SLP    +H  P + 
Sbjct: 628  PQFPSQHPTSFSTSHQNSEQMASAE---PQLLLSQRIHQTMPPSASLP--ASNHLLPPTY 682

Query: 1038 V-------ASVGTIL--PNLYMQVRMPNLNAPNASTXXXXXXXXXXXXXXGA--SHVLPI 892
                    +S+G     P    QV +P +N PN S+                  S  +P 
Sbjct: 683  RYPLPGPGSSIGPHFSRPVSGPQVSIPLVNVPNTSSQFSSGALPPFPRGPLPMPSKFMPA 742

Query: 891  PQ-PSYSAPNPPVGGNFSNLFNSLMAQGVISLNQTSAKEDAVGLEFNPDLLKVRHESAVT 715
             Q P    PNPP  G FS+L NSLMAQG+ISL   +  +D VGL+FNPDLLKVRH+SAVT
Sbjct: 743  SQNPGQVNPNPPAAG-FSSLINSLMAQGLISLTNQAPAQDPVGLDFNPDLLKVRHDSAVT 801

Query: 714  ALYSDLPRQCTTCGLRFKLQEAHSSHMDWHVTRNRVTRNRKQKPSRKWFVSDNMWLTGAE 535
            ALY+DLPRQCTTCGLRFK QEAHSSHMDWHVT+NRV++NRKQK SRKWFVS NMWL+G E
Sbjct: 802  ALYADLPRQCTTCGLRFKCQEAHSSHMDWHVTKNRVSKNRKQKSSRKWFVSVNMWLSGTE 861

Query: 534  ALGTDSVPNFLPSEDIVEKKDDEELAVPADDDQKCCALCGEPFDDFFCDERDEWMYKGAV 355
            ALG+D+VP FLP+E +VE KDDEELAVPADD+Q  CALCGEPFDDF+ DE +EWMY+GAV
Sbjct: 862  ALGSDAVPGFLPTEQVVETKDDEELAVPADDEQNACALCGEPFDDFYSDETEEWMYRGAV 921

Query: 354  YMNAPGGPAADMDRSQLGPIVHAKCRSE-TGTVSEDTKKRDQDFTEEGSQRKRMR 193
            YMNAP G    M+RSQLGPI+HAKCRSE + T  ED++K D+   E+ SQRKRMR
Sbjct: 922  YMNAPSGSTVGMERSQLGPIIHAKCRSESSATPHEDSRKVDEG-PEDESQRKRMR 975


>XP_019067109.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
            [Solanum lycopersicum] XP_019067110.1 PREDICTED:
            polyadenylation and cleavage factor homolog 4 isoform X1
            [Solanum lycopersicum]
          Length = 979

 Score =  687 bits (1773), Expect = 0.0
 Identities = 441/1018 (43%), Positives = 565/1018 (55%), Gaps = 110/1018 (10%)
 Frame = -1

Query: 2916 YKPTPLQMNTMAISSKXXXXXTISERFREMVKEREEELRVS---GDDVGL----SGDEIV 2758
            Y  + L  N  A++       ++ ER++  +KERE E+R S   GDD  +    S +EIV
Sbjct: 7    YANSKLIQNDAAVAPPKPLSSSVIERYKSALKEREIEIRASMQGGDDDVIVLPPSMNEIV 66

Query: 2757 RLYDILLSELSVNSKPIITDLTIIAGEQRMYGAGIADAICCRIIEVPVEQKLPSLYLLDS 2578
            RLY++LLSEL+ NSKPIITDLTIIAGEQR +G GIA AIC RI+EVPVEQKLP+LYLLDS
Sbjct: 67   RLYEMLLSELAFNSKPIITDLTIIAGEQREHGEGIAHAICNRILEVPVEQKLPALYLLDS 126

Query: 2577 IVKNIGREYIKYFSARLPEVFCDAYKQVHPNVHPAMRHLFGTWSTVFPLSVLRKIESHLQ 2398
            +VKNIG++YIK+FSA LPEVFC+AY+QVHP++HPAMRHLFGTWSTVFP  VL+KIE+ LQ
Sbjct: 127  VVKNIGKDYIKHFSAHLPEVFCEAYRQVHPSMHPAMRHLFGTWSTVFPAPVLQKIETRLQ 186

Query: 2397 FXXXXXNQSLALPPLRASESPRPAHGIHINPKYLEARRQFVNETADSSVQPPRGVSTISK 2218
            F      QS  L   RASESPRPAHGIH+NPKYLEARRQ  + T DS       V   + 
Sbjct: 187  FSQPGVQQSSGLTSSRASESPRPAHGIHVNPKYLEARRQLGHSTIDS-------VRAENS 239

Query: 2217 LSNQNHSTDYEEFISDGDTDVXXXXXXXXXXXXXXXXXXXXXLPPTSSGRIEMSASLYGV 2038
              + +   + ++ +S                               +S +   S+S Y V
Sbjct: 240  TGHISSDLEAKQVLS-------------------------------TSSKNARSSSPYRV 268

Query: 2037 GRVGFSSPSLEHRQMDNSPGRG----ASPLDSGIDYRTGGFLGSTARTDDWKRICVPGDS 1870
            G     SP+L    +DN P  G    ASP  + +DY      G      +W+RI   G +
Sbjct: 269  GPPRSLSPTLNEFALDN-PAIGLRERASPSHTALDYGFSRVRGRDVERSEWQRILPDGAN 327

Query: 1869 KN-HVKTAVRLNNGVDVDRTRALIDAYGVDKRTDM--MKHPGVEEMQVNGIGTEPTM-AW 1702
            +   V    R+N G+D+   RALIDAYG+D+R  +  ++        +NG+G    +  W
Sbjct: 328  QQPDVPPKYRINKGIDLQGPRALIDAYGIDEREKVAHLRQQKTGNATINGLGNGLAVKTW 387

Query: 1701 QNSEEEEFQWENMSPTLADHGRKDVFXXXXXXXXSFRNTASVPPHL--------RQDWPN 1546
            QN+EEEEF WE+MSPTLAD    +          S R    V            R++W N
Sbjct: 388  QNTEEEEFNWEDMSPTLADQSPFNDLSASLRHPQSIRMRPCVDSQHAGPLVADPRRNWAN 447

Query: 1545 RPQFPAVNGSSIVDVPS----STDGLENTV-------------YAIHRVPTHIQD----- 1432
            R Q+  V+ SS+ DV S    S  G  N +             + + ++P ++       
Sbjct: 448  RGQYSLVHDSSVDDVHSFFWQSGRGARNKITGYCDETSLISGSHYLQKLPENVPQLPLRH 507

Query: 1431 ---------SSTHQFNATKVGNNA------RMPF---------------------QGSAI 1360
                     S T +     +GN A      R P+                     +G  +
Sbjct: 508  LKGEGSGISSVTGESKHPLIGNLAADGHTWRPPYVPPRMNPTFDSSVQDVRVVTGRGPGV 567

Query: 1359 -LPPNVEQKPSSIGYSPDLNTQNQGQ-PFMSRGGSHA-------RPML--QAYQNVNSSS 1213
              PP     P S+   P +   N  + P+     S++       RP+L  Q   N+ SSS
Sbjct: 568  PWPPQNVHTPHSLTSKPVVLPHNHVRSPYEVNNASNSVVNHTLDRPVLPEQHIDNLKSSS 627

Query: 1212 ------FPDHNLNNTESILQNPMLPFSGQQLGPIPFNQSLVHTAMLPPHSLPHDMQHHAA 1051
                  FP  +  +  +  QN     S +   P       +H  M P  SLP    +H  
Sbjct: 628  HIKFPQFPSQHPTSFSTSHQNSEQMASAE---PQLLLSQRIHQTMPPSASLP--ASNHLL 682

Query: 1050 PHSVV-------ASVGTILPNLYM--QVRMPNLNAPNASTXXXXXXXXXXXXXXGA--SH 904
            P +         +S+G   P      QV MP +N PN S+                  S 
Sbjct: 683  PPTYRYPLPGPGSSIGPHFPRPVSGPQVSMPLVNVPNTSSQFSSGALPPFPRGPLPMPSK 742

Query: 903  VLPIPQ-PSYSAPNPPVGGNFSNLFNSLMAQGVISLNQTSAKEDAVGLEFNPDLLKVRHE 727
             +P  Q P    PNPP  G FS+L NSLMAQG+ISL   +  +D VGL+FNPDLLKVRH+
Sbjct: 743  FMPASQNPGQVTPNPPAAG-FSSLINSLMAQGLISLTNQAPAQDPVGLDFNPDLLKVRHD 801

Query: 726  SAVTALYSDLPRQCTTCGLRFKLQEAHSSHMDWHVTRNRVTRNRKQKPSRKWFVSDNMWL 547
            SAVTALY+DLPRQCTTCGLRFK QEAHSSHMDWHVT+NRV++NRKQK SRKWFVS NMWL
Sbjct: 802  SAVTALYADLPRQCTTCGLRFKCQEAHSSHMDWHVTKNRVSKNRKQKSSRKWFVSVNMWL 861

Query: 546  TGAEALGTDSVPNFLPSEDIVEKKDDEELAVPADDDQKCCALCGEPFDDFFCDERDEWMY 367
            +G EALG+D+VP FLP+E +VE KDDEELAVPADD+Q  CALCGEPFDDF+ DE +EWMY
Sbjct: 862  SGTEALGSDAVPGFLPTEQVVETKDDEELAVPADDEQNACALCGEPFDDFYSDETEEWMY 921

Query: 366  KGAVYMNAPGGPAADMDRSQLGPIVHAKCRSETGTVSEDTKKRDQDFTEEGSQRKRMR 193
            +GAVYMNAP G    M+RSQLGPI+HAKCRSE+    ED++K D+   E+ SQRKRMR
Sbjct: 922  RGAVYMNAPSGSTVGMERSQLGPIIHAKCRSESSAPHEDSRKVDEG-PEDESQRKRMR 978


>XP_016753657.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X2 [Gossypium hirsutum]
          Length = 1004

 Score =  686 bits (1769), Expect = 0.0
 Identities = 444/1003 (44%), Positives = 568/1003 (56%), Gaps = 117/1003 (11%)
 Frame = -1

Query: 2850 ISERFREMVKEREEELRVSG---DDVGLSG--DEIVRLYDILLSELSVNSKPIITDLTII 2686
            ISERF+ ++K+RE+ELRVSG   DD G +   +EIV+LY+++LSEL+ NSKPIITDLTII
Sbjct: 15   ISERFKALLKQREDELRVSGGIADDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLTII 74

Query: 2685 AGEQRMYGAGIADAICCRIIEVPVEQKLPSLYLLDSIVKNIGREYIKYFSARLPEVFCDA 2506
            AGEQR +G GIADAIC RIIEVPVEQKLPSLYLLDSIVKNIGREY++YFS+RLPEVFC+A
Sbjct: 75   AGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFCEA 134

Query: 2505 YKQVHPNVHPAMRHLFGTWSTVFPLSVLRKIESHLQFXXXXXNQSLALPPLRASESPRPA 2326
            Y+QV+PN+HPAMRHLFGTWSTVF  SVL KIE  LQF      QS  +  L++SESPRP 
Sbjct: 135  YRQVNPNLHPAMRHLFGTWSTVFSPSVLGKIEMQLQFSQTGNQQSSGVTSLQSSESPRPT 194

Query: 2325 HGIHINPKYLEARRQFVNETADSSVQPPRGVSTISKLSNQNHSTDYEEFISDGDTDVXXX 2146
            HGIH+NPKYL    Q     ADS+ Q  RG+S   KL  + H+  Y+EF SD  T+V   
Sbjct: 195  HGIHVNPKYLRQLEQ--QSGADSNTQHVRGMSAGQKLYGKKHTIAYDEFDSD-HTEVPSS 251

Query: 2145 XXXXXXXXXXXXXXXXXXLPPTSSGRIEMSAS---LYGVGRVGFS---SPSLEHRQMDNS 1984
                                  +  ++  ++    L+   R+G     S  ++    D+S
Sbjct: 252  HVGVQRLSSTGNVGRTSLAIGANKSQLSSASRVSRLFSPSRIGSDRLLSSEVDDLPSDDS 311

Query: 1983 PGRGASPLDSG----IDYRTGGFLGSTARTDDWKRICVPGDSKNHVKT---AVRLNNGVD 1825
            P R A           D+  G        T +W R    GD +N  ++   A +L+NG +
Sbjct: 312  PRRFAEVASPSRPPVFDFGRGRGTIRDEETREWPRKHFYGDYRNCSESSLNAYKLSNGNE 371

Query: 1824 VDRTRALIDAYGVDKRTDMM--KHPGVEEMQVNGIGTEPT-MAWQNSEEEEFQWENMSPT 1654
                RALIDAYG D+   M   K   VE + VNG+G + T  +WQN+EEEEF WE+MSPT
Sbjct: 372  RQTLRALIDAYGNDRGQGMSNSKPVQVERLDVNGMGNKVTPRSWQNTEEEEFDWEDMSPT 431

Query: 1653 LADHGRKDVFXXXXXXXXSFRNTASVPPHL---RQDWPNRPQFPAVNGSSIVD--VPSST 1489
            LAD  R + F         F +  + P  L   R    N+ Q      S+I +  VPS +
Sbjct: 432  LADR-RSNEFSVSSVST--FGSIGARPAGLESNRSSRSNQTQLALDESSTIPEDTVPSLS 488

Query: 1488 DGLENTVYAIHRVPTHIQDS---------STHQFNATKVGNNARMPFQGSA--------- 1363
             G  + +  I R P + QD+         S+HQ +A   G + R PF  S          
Sbjct: 489  SG--HGLNQIQR-PRYPQDAWSNSYPFSQSSHQLHAKGRGRDFRTPFSASGISSLGGDKN 545

Query: 1362 --------------ILPPNVEQK------------------PSSIGYSPDLNTQNQGQP- 1282
                          + PP +  +                  P + G  P +N      P 
Sbjct: 546  VPLIEKLPEGGSQFVRPPALVPRSGSSSLDTVTVGAQPAMLPLTAGAWPPVNVLKSQPPT 605

Query: 1281 ------FMSRGGSHARPM--LQAYQNVNSSSFP------DHNLNNTESILQNPMLPFSGQ 1144
                      G SH   +  + A  N   +  P      D+  +  +S+   P LP  GQ
Sbjct: 606  AHTNYSLQQHGRSHFDSLNPINAAMNQGQNKHPYMPEQFDNFESKEQSLTTVPQLP--GQ 663

Query: 1143 QLGPIPFNQSLVH--------------------TAMLPPHSLPHDMQHHAAPHSVVASVG 1024
            +  P    ++ +H                    T  LPP  L   M H  +P    A + 
Sbjct: 664  R--PALRQRNSLHGSLQLHFTPHEARDSFLSSATGPLPPRLLAPSMNHGYSPQMHGAGI- 720

Query: 1023 TILPNLYMQVRMPNLNAPNASTXXXXXXXXXXXXXXG----ASHVLPIPQPSYSA-PNPP 859
            +++P+  + V  P L+ PN  T                   AS ++P  Q +    PN P
Sbjct: 721  SMVPSNPVPVAQPPLSIPNMPTGSLHLQGGAIPPLPSGPRPASQMMPATQNAGPLLPNQP 780

Query: 858  VGGNFSNLFNSLMAQGVISLNQTSAKEDAVGLEFNPDLLKVRHESAVTALYSDLPRQCTT 679
             GG F+ L +SLMAQG+ISL + +  +D+VGLEF+ DLLKVRHESA++ALY+DLPRQCTT
Sbjct: 781  QGGPFTGLISSLMAQGLISLTKPTPIQDSVGLEFDADLLKVRHESAISALYADLPRQCTT 840

Query: 678  CGLRFKLQEAHSSHMDWHVTRNRVTRNRKQKPSRKWFVSDNMWLTGAEALGTDSVPNFLP 499
            CGLRFK QE HS+HMDWHVTRNR+++NRKQKPSRKWFVS +MWL+GAEALGTD+VP FLP
Sbjct: 841  CGLRFKFQEEHSTHMDWHVTRNRMSKNRKQKPSRKWFVSASMWLSGAEALGTDAVPGFLP 900

Query: 498  SEDIVEKKDDEELAVPADDDQKCCALCGEPFDDFFCDERDEWMYKGAVYMNAPGGPAADM 319
            +EDIVEKKDDEELAV AD+DQ  CALCGEPFDDF+ DE +EWMY+GAVYMNAP G    +
Sbjct: 901  TEDIVEKKDDEELAVSADEDQNLCALCGEPFDDFYSDETEEWMYRGAVYMNAPSGSVEGI 960

Query: 318  DRSQLGPIVHAKCRSETGTV-SEDTKKRDQDFTEEGSQRKRMR 193
            DRSQLGPIVHAKCRSE+  V  ED  + D    E+ SQRKR+R
Sbjct: 961  DRSQLGPIVHAKCRSESSVVPPEDFVRYDGGNPEDSSQRKRLR 1003


>XP_019173654.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X1 [Ipomoea nil]
          Length = 980

 Score =  682 bits (1761), Expect = 0.0
 Identities = 424/981 (43%), Positives = 545/981 (55%), Gaps = 95/981 (9%)
 Frame = -1

Query: 2850 ISERFREMVKEREEELRVSGDDVGLSG---DEIVRLYDILLSELSVNSKPIITDLTIIAG 2680
            I +RF+ M+KER+EE+RVS +D  +S    DE+VRLY+I+LS+L+ NSKPIIT+LTIIAG
Sbjct: 39   ILDRFKAMLKERDEEVRVSSEDGVISPPTMDEVVRLYEIVLSDLTFNSKPIITELTIIAG 98

Query: 2679 EQRMYGAGIADAICCRIIEVPVEQKLPSLYLLDSIVKNIGREYIKYFSARLPEVFCDAYK 2500
            EQR +  GIA+AIC RI+E PVEQKLPSLYLLDSIVKNIGREYI++ SARLPEVFC+AY+
Sbjct: 99   EQREHSQGIANAICSRILEAPVEQKLPSLYLLDSIVKNIGREYIRHISARLPEVFCEAYR 158

Query: 2499 QVHPNVHPAMRHLFGTWSTVFPLSVLRKIESHLQFXXXXXNQSLALPPLRASESPRPAHG 2320
            QV PN+  A+RHLFGTWSTVFP SVLRKIE+ LQF     +QS  L  LRASES RP HG
Sbjct: 159  QVQPNMFAALRHLFGTWSTVFPSSVLRKIEACLQFSPSTSHQSSGLTNLRASESSRPGHG 218

Query: 2319 IHINPKYLEARRQFVNETADSSVQPPRGVSTISKLSNQNHSTDYEEFISDGDTDVXXXXX 2140
            IH+NPKYLEARRQ V            G STI+ +  +  S+     +   D D      
Sbjct: 219  IHVNPKYLEARRQLV------------GHSTINAVGAEKLSSTGRAGLISSDIDAVKLL- 265

Query: 2139 XXXXXXXXXXXXXXXXLPPTSSGRIEMSASLYGVGRVGFSSPSLEHRQMDNSP--GRGAS 1966
                              PT++ R   S+S +GVGR    SP ++   +++SP      S
Sbjct: 266  ------------------PTAAARTVRSSSPFGVGRARSLSPPVDDFAVESSPQISERPS 307

Query: 1965 PLDSGIDYRTGGFLGSTARTDDWKRICVPGDSKNHVKTAVRLN--NGVDVDRTRALIDAY 1792
            P  S IDY   G +     T DW R  +  DS   ++ +V  N   GVD+   RALIDAY
Sbjct: 308  PSHSRIDYGLNGVMAGDDETIDWHRNLLHDDSSQRLENSVSYNVKKGVDLQGPRALIDAY 367

Query: 1791 GVDKR--TDMMKHPGVEEMQVNGIGTEPTM-AWQNSEEEEFQWENMSPTLADHGRKDVFX 1621
            G+D+R  T    H  + +   NGIG    +  WQN+EEEEF WE+MSPTL D  R++ F 
Sbjct: 368  GIDEREKTFNYHHHKLGQPDANGIGKRVGVKTWQNTEEEEFNWEDMSPTLGDPSRRNDFS 427

Query: 1620 XXXXXXXSF--------RNTASVPPHLRQDWPNRPQFPAVNG--------------SSIV 1507
                    F            S     R+  P++ Q   V                +S++
Sbjct: 428  SSMPPSGRFITGPRVGSLQAVSAINDSRRSLPDQAQHSLVKSGRGITSKIPGFYEEASLI 487

Query: 1506 DVPSSTDGLENTVYAIHRVPTHIQDSSTHQFNATKVGNNARMPFQGSAILPPNVEQKPSS 1327
              PS +   +        +P      S H       G    M   G+ +     EQK   
Sbjct: 488  SAPSYSQEPQ-------FLPQDFPQQSHHHIRVEGGGRAPSMRLSGTGLSTKVGEQKLHL 540

Query: 1326 IG------------------YSPDLNTQNQGQPFMSRG-GSHARPMLQAY--QNVNSSSF 1210
            +G                   +P  N+  Q    ++ G  + A P +  +  Q +NS+S 
Sbjct: 541  VGNLTTADGKFWRPPSVASRVNPGFNSSVQDVQAVNTGLSTGAWPTISTHNSQLLNSTSM 600

Query: 1209 -----------------PDHNLN-------NTESILQNPMLPFSGQQLGPIPFNQSLVHT 1102
                              +H LN       +     + P LP   Q  G +P N      
Sbjct: 601  IPPQKQIRDQFDAMNTVANHGLNERRIDNIDLRPQFELPRLPV--QHPGAVPLNHQRSGQ 658

Query: 1101 AMLPPHSLPHD--MQHHAAPHSVVASVGTILPNLY------------MQVRMPNLNAPNA 964
              L    LP    +Q+   P ++     T++P               +Q  +P +N PN 
Sbjct: 659  ISLSQPQLPCQDVLQNKVPPAAMAVPTHTLMPPSNYGYTPQGQGVSGVQSTLPMVNIPNT 718

Query: 963  ST--XXXXXXXXXXXXXXGASHVLPIPQPS-YSAPNPPVGGNFSNLFNSLMAQGVISLNQ 793
            S                  A  ++P  QPS     + P GG FSNL N+LMAQG+ISL+ 
Sbjct: 719  SLQFTGAALPPIARVPTPAAPQMMPTLQPSGQVTQSAPQGGTFSNLINTLMAQGLISLSN 778

Query: 792  TSAKEDAVGLEFNPDLLKVRHESAVTALYSDLPRQCTTCGLRFKLQEAHSSHMDWHVTRN 613
             +  ED+VG EFN +LLK RHES +TALYS LPRQCTTCGLRFK Q+AHSSHMDWHVT+N
Sbjct: 779  QAPPEDSVGTEFNMELLKERHESTITALYSALPRQCTTCGLRFKSQDAHSSHMDWHVTKN 838

Query: 612  RVTRNRKQKPSRKWFVSDNMWLTGAEALGTDSVPNFLPSEDIVEKKDDEELAVPADDDQK 433
            R+++NRK  PSRKWFVS +MWL+ AEALGTD+VP FLP ED+VEKKDD+ELAVPADD+Q 
Sbjct: 839  RLSKNRKHNPSRKWFVSLSMWLSSAEALGTDAVPGFLPLEDVVEKKDDDELAVPADDEQN 898

Query: 432  CCALCGEPFDDFFCDERDEWMYKGAVYMNAPGGPAADMDRSQLGPIVHAKCRSE-TGTVS 256
             CALCGEPFDDF+ DE +EWM++GAVYMNAP G   +MDRSQLGPIVHAKCRSE + +  
Sbjct: 899  ACALCGEPFDDFYSDETEEWMFRGAVYMNAPTGSTTEMDRSQLGPIVHAKCRSESSSSCI 958

Query: 255  EDTKKRDQDFTEEGSQRKRMR 193
            E +KK D+ +T++G  RKRMR
Sbjct: 959  EASKKHDEGYTDDGGLRKRMR 979