BLASTX nr result

ID: Lithospermum23_contig00005695 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00005695
         (899 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

OMP10912.1 Ribosomal protein S10 [Corchorus olitorius]                133   2e-34
ERN11849.1 hypothetical protein AMTR_s00020p00100020 [Amborella ...   124   2e-32
KRH04768.1 hypothetical protein GLYMA_17G185400 [Glycine max]         112   4e-28
KCW59989.1 hypothetical protein EUGRSUZ_H02721 [Eucalyptus grandis]   102   5e-24
CBI40707.3 unnamed protein product, partial [Vitis vinifera]          110   1e-23
XP_013442761.1 ribosomal protein S10 [Medicago truncatula] KEH16...    83   9e-17
CBI31112.3 unnamed protein product, partial [Vitis vinifera]           91   1e-16
KJB09760.1 hypothetical protein B456_001G162600 [Gossypium raimo...    76   9e-14
CAN65166.1 hypothetical protein VITISV_029400 [Vitis vinifera]         68   2e-09
ERM93694.1 hypothetical protein AMTR_s00004p00209040 [Amborella ...    42   2e-08
XP_012436112.1 PREDICTED: ribosomal protein S10, mitochondrial [...    60   3e-07

>OMP10912.1 Ribosomal protein S10 [Corchorus olitorius]
          Length = 201

 Score =  133 bits (334), Expect = 2e-34
 Identities = 84/148 (56%), Positives = 96/148 (64%), Gaps = 2/148 (1%)
 Frame = +2

Query: 380 SVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQKTGGTALGRRRSKKRRLTQLKEGALEAY 559
           + GKRSPEYSTRSPFLAAMGSTC+QGKPNG +K GGTALGRRRSKKRRL QLKEGALEA+
Sbjct: 27  TTGKRSPEYSTRSPFLAAMGSTCKQGKPNGTKKRGGTALGRRRSKKRRLAQLKEGALEAH 86

Query: 560 LIIK-RGKGQPINLIRRKGVR*ARGSLLPSRP-GREESRDLCRC*LGSRVTE*VGQKXXX 733
           LII+ RGKG  I    R        S  P+RP G + S  +     G  +      +   
Sbjct: 87  LIIRERGKGGEIGDRER--------SYKPARPRGIKRSFPVLTWISGDGIRR---IEATS 135

Query: 734 XXXXXXXLADRLAVSLATAKRLPSTKER 817
                  +A RLAVSL TAKRLPS K+R
Sbjct: 136 SRGRSLAIAHRLAVSLTTAKRLPSAKKR 163


>ERN11849.1 hypothetical protein AMTR_s00020p00100020 [Amborella trichopoda]
          Length = 85

 Score =  124 bits (311), Expect = 2e-32
 Identities = 58/68 (85%), Positives = 59/68 (86%)
 Frame = -3

Query: 486 PPVFWFPLGLPCSQVDPMAARKGDLVLYSGDLFPTEARKLPSCPRSHSVNRKGKPTHLSA 307
           PPVFWFPLGLPCSQVDP A RKGDLVLYS DL PTEA KLPSCP+SHSVNRKGKPTH SA
Sbjct: 4   PPVFWFPLGLPCSQVDPNAVRKGDLVLYSDDLLPTEACKLPSCPKSHSVNRKGKPTHPSA 63

Query: 306 PLVDRCGF 283
           PLVD   F
Sbjct: 64  PLVDAVWF 71


>KRH04768.1 hypothetical protein GLYMA_17G185400 [Glycine max]
          Length = 62

 Score =  112 bits (280), Expect = 4e-28
 Identities = 56/62 (90%), Positives = 56/62 (90%), Gaps = 1/62 (1%)
 Frame = -3

Query: 435 MAARK-GDLVLYSGDLFPTEARKLPSCPRSHSVNRKGKPTHLSAPLVDRCGFTKRLSTVH 259
           MAARK GDLVLY GDLFPTEARK PSCPRSHSVNRKGKPTH  APLVDRCGFTKRL TVH
Sbjct: 1   MAARKKGDLVLYFGDLFPTEARKPPSCPRSHSVNRKGKPTHPLAPLVDRCGFTKRLGTVH 60

Query: 258 SR 253
           SR
Sbjct: 61  SR 62


>KCW59989.1 hypothetical protein EUGRSUZ_H02721 [Eucalyptus grandis]
          Length = 76

 Score =  102 bits (253), Expect = 5e-24
 Identities = 47/60 (78%), Positives = 51/60 (85%)
 Frame = +2

Query: 344 ECDLGHDGSLRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQKTGGTALGRRRSKKRR 523
           ECDLGHDGSL ASVGKRSPEYSTR PFLAAMGSTCEQGKPNGNQK GG  +G++   K +
Sbjct: 2   ECDLGHDGSLHASVGKRSPEYSTRLPFLAAMGSTCEQGKPNGNQKMGGYCIGQKTIHKAK 61



 Score = 53.5 bits (127), Expect = 6e-06
 Identities = 25/29 (86%), Positives = 25/29 (86%)
 Frame = +1

Query: 475 KNGGYRIGQKTIQKAKAHPAEGRSFGSLP 561
           K GGY IGQKTI KAKAHP EGRSFGSLP
Sbjct: 46  KMGGYCIGQKTIHKAKAHPIEGRSFGSLP 74


>CBI40707.3 unnamed protein product, partial [Vitis vinifera]
          Length = 574

 Score =  110 bits (276), Expect = 1e-23
 Identities = 52/56 (92%), Positives = 52/56 (92%)
 Frame = +2

Query: 320 VGFPFRFTECDLGHDGSLRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQKTGG 487
           VGF FRF ECDLGHDGSLRASVGKRS EYSTRSPFLA MGSTCEQGKPNGNQKTGG
Sbjct: 515 VGFLFRFIECDLGHDGSLRASVGKRSSEYSTRSPFLATMGSTCEQGKPNGNQKTGG 570


>XP_013442761.1 ribosomal protein S10 [Medicago truncatula] KEH16786.1 ribosomal
           protein S10 [Medicago truncatula]
          Length = 81

 Score = 83.2 bits (204), Expect = 9e-17
 Identities = 44/56 (78%), Positives = 47/56 (83%), Gaps = 3/56 (5%)
 Frame = +2

Query: 380 SVGKRSPEYSTRSP-FLAAMGSTCEQGKPNGNQKTGGTA--LGRRRSKKRRLTQLK 538
           + GKRSPEYSTRSP FLA MGSTC+QGKPNGNQK  GT   LGRRRSKK+RLT LK
Sbjct: 15  TTGKRSPEYSTRSPCFLAVMGSTCKQGKPNGNQKREGTTLILGRRRSKKQRLTLLK 70


>CBI31112.3 unnamed protein product, partial [Vitis vinifera]
          Length = 2099

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 72/168 (42%), Positives = 81/168 (48%), Gaps = 1/168 (0%)
 Frame = +1

Query: 199  QEVYDTTGNLKEWRQT*STRVNCA*TLRKTAPIYERS**MSRLPLSIHGM*SGTRWEFAC 378
            ++VYDTTGNLKEWR   S        + K +P Y      +R P              A 
Sbjct: 1761 RQVYDTTGNLKEWRLRAS--------VGKRSPEYS-----TRSPF------------LAA 1795

Query: 379  LGRKEITGV*HKIAFSCCHGVDL*TR*TQWEPKNGGYRIGQKTIQKAKAHPAEGRSFGSL 558
            +G             +C  G            K GGYRIGQKTIQKAKAHPAEGRSF   
Sbjct: 1796 MGS------------TCEQGKP------NGNQKMGGYRIGQKTIQKAKAHPAEGRSFDLT 1837

Query: 559  P-YY*KGKGATYQPNKKKGGEIGKR*LASKPARPRGIKRSLPVLTWIS 699
            P    KG+               +R LASKPARPRGIKRSLPVLTWIS
Sbjct: 1838 PLLLFKGERVVVDQADY------RRQLASKPARPRGIKRSLPVLTWIS 1879


>KJB09760.1 hypothetical protein B456_001G162600 [Gossypium raimondii]
          Length = 118

 Score = 76.3 bits (186), Expect = 9e-14
 Identities = 47/85 (55%), Positives = 47/85 (55%)
 Frame = +1

Query: 475 KNGGYRIGQKTIQKAKAHPAEGRSFGSLPYY*KGKGATYQPNKKKGGEIGKR*LASKPAR 654
           K GGYRIGQKTIQKAK                K KGATY  N KKGG             
Sbjct: 15  KTGGYRIGQKTIQKAKR---------------KRKGATYLTNNKKGG------------- 46

Query: 655 PRGIKRSLPVLTWISGDGISRPEAT 729
              IKRSLPVLTWISGDGI RPEAT
Sbjct: 47  ---IKRSLPVLTWISGDGIRRPEAT 68


>CAN65166.1 hypothetical protein VITISV_029400 [Vitis vinifera]
          Length = 267

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 34/42 (80%), Positives = 37/42 (88%)
 Frame = -1

Query: 728 VASGRLIPSPEIQVSTGKDLLIPRGRAGLEASYLLPISPPFF 603
           VASGRLIPSPEIQVSTGKDLLIPRGRAGLEASY   ++  F+
Sbjct: 47  VASGRLIPSPEIQVSTGKDLLIPRGRAGLEASYRKLLATRFY 88



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 35/60 (58%), Positives = 39/60 (65%), Gaps = 11/60 (18%)
 Frame = -3

Query: 471 FPLGLPCSQ-----------VDPMAARKGDLVLYSGDLFPTEARKLPSCPRSHSVNRKGK 325
           +P+GL  S            VDPMAARKGDLVLYSGDLFPTEARKLPSC +      KG+
Sbjct: 94  YPIGLEASYLSPISRPFNFLVDPMAARKGDLVLYSGDLFPTEARKLPSCTQITFRESKGE 153


>ERM93694.1 hypothetical protein AMTR_s00004p00209040 [Amborella trichopoda]
          Length = 172

 Score = 41.6 bits (96), Expect(3) = 2e-08
 Identities = 26/49 (53%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = +2

Query: 467 GNQKTGGTALGRRRSKKRRLTQLKE-GALEAYLIIKRGKGQPINLIRRK 610
           G +K  GTALGRRRSKKRRLT L E G  E Y       G  I + R+K
Sbjct: 2   GTKKWEGTALGRRRSKKRRLTHLGEIGNREPYFFQADRLGPGIEVSRQK 50



 Score = 34.3 bits (77), Expect(3) = 2e-08
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +1

Query: 676 LPVLTWISGDGISRPEA 726
           +PVLTWISGDGI RP A
Sbjct: 70  VPVLTWISGDGIRRPSA 86



 Score = 30.8 bits (68), Expect(3) = 2e-08
 Identities = 12/14 (85%), Positives = 14/14 (100%)
 Frame = +3

Query: 627 EVACFQAGPAARNQ 668
           +VACFQAGPAARN+
Sbjct: 54  QVACFQAGPAARNE 67


>XP_012436112.1 PREDICTED: ribosomal protein S10, mitochondrial [Gossypium
           raimondii]
          Length = 171

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = +2

Query: 53  SVKTPCDSEDIRLLGQAKKIADWMLLPHHAWPFSLP 160
           SVKTPCD  DIRLLGQAK ++D +LLPHHA PF+LP
Sbjct: 100 SVKTPCDLGDIRLLGQAKNLSDRVLLPHHARPFTLP 135


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