BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00005419
         (731 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_011074171.1 PREDICTED: RNA pseudouridine synthase 3, mitochon...   248   1e-76
EYU34909.1 hypothetical protein MIMGU_mgv1a006040mg [Erythranthe...   236   5e-72
XP_012840385.1 PREDICTED: RNA pseudouridine synthase 3, mitochon...   234   4e-71
XP_012854072.1 PREDICTED: RNA pseudouridine synthase 3, mitochon...   233   6e-71
CDO98596.1 unnamed protein product [Coffea canephora]                 224   2e-67
XP_010263262.1 PREDICTED: RNA pseudouridine synthase 3, mitochon...   223   4e-67
EYU23584.1 hypothetical protein MIMGU_mgv1a026780mg, partial [Er...   220   4e-66
XP_007023655.2 PREDICTED: RNA pseudouridine synthase 3, mitochon...   219   1e-65
EOY26277.1 Pseudouridine synthase family protein [Theobroma cacao]    219   1e-65
XP_016577308.1 PREDICTED: RNA pseudouridine synthase 3, mitochon...   218   2e-65
XP_016577307.1 PREDICTED: RNA pseudouridine synthase 3, mitochon...   218   7e-65
XP_016433864.1 PREDICTED: RNA pseudouridine synthase 3, mitochon...   216   4e-64
XP_009620200.1 PREDICTED: RNA pseudouridine synthase 3, mitochon...   216   4e-64
XP_019176142.1 PREDICTED: RNA pseudouridine synthase 3, mitochon...   214   1e-63
XP_002267010.1 PREDICTED: RNA pseudouridine synthase 3, mitochon...   213   3e-63
XP_019249221.1 PREDICTED: RNA pseudouridine synthase 3, mitochon...   213   5e-63
KJB56430.1 hypothetical protein B456_009G119600 [Gossypium raimo...   206   8e-63
XP_016462039.1 PREDICTED: RNA pseudouridine synthase 3, mitochon...   212   9e-63
XP_009804022.1 PREDICTED: RNA pseudouridine synthase 3, mitochon...   212   1e-62
KJB56433.1 hypothetical protein B456_009G119600 [Gossypium raimo...   206   3e-62

>XP_011074171.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Sesamum
           indicum]
          Length = 475

 Score =  248 bits (633), Expect = 1e-76
 Identities = 124/177 (70%), Positives = 145/177 (81%)
 Frame = -3

Query: 531 TKSKVRXXXXXXXXPIIRVSNHIAHLGRPKAGPKPRQLLSLPPFPGGYPLAGRKPSGTGQ 352
           +KSK+R         +IRV+N+IAHLGRPK GPKPRQLLSLPPFPG + L GRK S + +
Sbjct: 18  SKSKIRPPPPASSPDVIRVTNNIAHLGRPKEGPKPRQLLSLPPFPG-HSLPGRK-STSAE 75

Query: 351 HVTAISWLKYYFDDIPPPLIQSHFNKGLVKVECLDSVGLTNSRKGIAKSMRKINHSEVMK 172
           HVTAISWLKYYFDDIPPPLIQSHFNKGLV++E LDS G +   +G   SMRK+ HS+VM+
Sbjct: 76  HVTAISWLKYYFDDIPPPLIQSHFNKGLVQMESLDSRGPSGCHQGQTDSMRKLKHSDVME 135

Query: 171 KGARIYAPVTVTEAKINKRFDVIPTGTQYPNADEIQYLQRLVMYKDSAILVLNKPPK 1
            GAR+Y PV+V E KI+KRFDVIP+GT YPNADEI+YL+RLV YKDSAILVLNKPPK
Sbjct: 136 VGARVYVPVSVAECKISKRFDVIPSGTLYPNADEIEYLRRLVKYKDSAILVLNKPPK 192


>EYU34909.1 hypothetical protein MIMGU_mgv1a006040mg [Erythranthe guttata]
          Length = 460

 Score =  236 bits (601), Expect = 5e-72
 Identities = 116/177 (65%), Positives = 140/177 (79%)
 Frame = -3

Query: 531 TKSKVRXXXXXXXXPIIRVSNHIAHLGRPKAGPKPRQLLSLPPFPGGYPLAGRKPSGTGQ 352
           T+SK+R         ++RVSN+IAHLG PK GPKPRQLLSLPPFPG  PL GR  +   +
Sbjct: 3   TRSKIRPPPPASAKAVLRVSNNIAHLGAPKEGPKPRQLLSLPPFPGN-PLPGRNSTSV-E 60

Query: 351 HVTAISWLKYYFDDIPPPLIQSHFNKGLVKVECLDSVGLTNSRKGIAKSMRKINHSEVMK 172
           HVTAISWLKYYFDD+ PP+IQ HFNKGLV++ECL+S GL+ S +G   S RKI  SE+++
Sbjct: 61  HVTAISWLKYYFDDVIPPVIQHHFNKGLVRMECLNSSGLSESYRGQTMSTRKIKPSEIVE 120

Query: 171 KGARIYAPVTVTEAKINKRFDVIPTGTQYPNADEIQYLQRLVMYKDSAILVLNKPPK 1
           +G R+Y PV+V E K++KRFDVIP+GT +PNADEI YLQRLV YKDSAILVLNKPPK
Sbjct: 121 EGDRVYVPVSVAENKVSKRFDVIPSGTLHPNADEIMYLQRLVKYKDSAILVLNKPPK 177


>XP_012840385.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like
           [Erythranthe guttata] XP_012853148.1 PREDICTED: RNA
           pseudouridine synthase 3, mitochondrial-like isoform X2
           [Erythranthe guttata]
          Length = 475

 Score =  234 bits (596), Expect = 4e-71
 Identities = 115/176 (65%), Positives = 139/176 (78%)
 Frame = -3

Query: 528 KSKVRXXXXXXXXPIIRVSNHIAHLGRPKAGPKPRQLLSLPPFPGGYPLAGRKPSGTGQH 349
           +SK+R         ++RVSN+IAHLG PK GPKPRQLLSLPPFPG  PL GR  +   +H
Sbjct: 19  RSKIRPPPPASAKAVLRVSNNIAHLGAPKEGPKPRQLLSLPPFPGN-PLPGRNSTSV-EH 76

Query: 348 VTAISWLKYYFDDIPPPLIQSHFNKGLVKVECLDSVGLTNSRKGIAKSMRKINHSEVMKK 169
           VTAISWLKYYFDD+ PP+IQ HFNKGLV++ECL+S GL+ S +G   S RKI  SE++++
Sbjct: 77  VTAISWLKYYFDDVIPPVIQHHFNKGLVRMECLNSSGLSESYRGQTMSTRKIKPSEIVEE 136

Query: 168 GARIYAPVTVTEAKINKRFDVIPTGTQYPNADEIQYLQRLVMYKDSAILVLNKPPK 1
           G R+Y PV+V E K++KRFDVIP+GT +PNADEI YLQRLV YKDSAILVLNKPPK
Sbjct: 137 GDRVYVPVSVAENKVSKRFDVIPSGTLHPNADEIMYLQRLVKYKDSAILVLNKPPK 192


>XP_012854072.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like
           [Erythranthe guttata] XP_012854073.1 PREDICTED: RNA
           pseudouridine synthase 3, mitochondrial-like
           [Erythranthe guttata]
          Length = 475

 Score =  233 bits (595), Expect = 6e-71
 Identities = 119/189 (62%), Positives = 142/189 (75%)
 Frame = -3

Query: 567 QKMVMKARHYSRTKSKVRXXXXXXXXPIIRVSNHIAHLGRPKAGPKPRQLLSLPPFPGGY 388
           QK +    H  R  SK+R         ++RVSN+IAHLG PK GPKP+QLLSLPPFPG  
Sbjct: 8   QKTISTVWHNRR--SKIRPPPPASTKAVLRVSNNIAHLGAPKEGPKPKQLLSLPPFPGN- 64

Query: 387 PLAGRKPSGTGQHVTAISWLKYYFDDIPPPLIQSHFNKGLVKVECLDSVGLTNSRKGIAK 208
           PL GR  +   +HVTAISWLKYYFDD+ PP+IQ HFNKGLV++ECL+S GL+ S  G   
Sbjct: 65  PLPGRHSTSV-EHVTAISWLKYYFDDVIPPVIQHHFNKGLVRMECLNSSGLSESYTGQTM 123

Query: 207 SMRKINHSEVMKKGARIYAPVTVTEAKINKRFDVIPTGTQYPNADEIQYLQRLVMYKDSA 28
           S RKI  SE+M++G R+Y PV+V E K++KRFDVIP+GT +PNADEI YLQRLV YKDSA
Sbjct: 124 STRKIKPSEIMEEGDRVYVPVSVAENKVSKRFDVIPSGTLHPNADEIMYLQRLVKYKDSA 183

Query: 27  ILVLNKPPK 1
           ILVLNKPPK
Sbjct: 184 ILVLNKPPK 192


>CDO98596.1 unnamed protein product [Coffea canephora]
          Length = 465

 Score =  224 bits (570), Expect = 2e-67
 Identities = 124/198 (62%), Positives = 147/198 (74%)
 Frame = -3

Query: 594 WKKTLSEDGQKMVMKARHYSRTKSKVRXXXXXXXXPIIRVSNHIAHLGRPKAGPKPRQLL 415
           W K +   G  +    RHYSR+K KV+         +IRV+N++AHLGRP+ GPKPRQLL
Sbjct: 3   WNKVVKLSGYSV----RHYSRSK-KVQPPR------VIRVTNNVAHLGRPRKGPKPRQLL 51

Query: 414 SLPPFPGGYPLAGRKPSGTGQHVTAISWLKYYFDDIPPPLIQSHFNKGLVKVECLDSVGL 235
           SLPPFPG  PL GR  S TG HVTAISWLKYYFDDIP  ++QSHFNKGLV++E LDS   
Sbjct: 52  SLPPFPG-LPLPGRN-SSTG-HVTAISWLKYYFDDIPGDVVQSHFNKGLVQMESLDSSMS 108

Query: 234 TNSRKGIAKSMRKINHSEVMKKGARIYAPVTVTEAKINKRFDVIPTGTQYPNADEIQYLQ 55
           + S+    KS RKINH+E M+ GAR+  PV+V EAKI+KRFD+IP+GT YPNADEI+YLQ
Sbjct: 109 SKSQGMQTKSTRKINHNEAMEPGARVSVPVSVAEAKISKRFDIIPSGTLYPNADEIEYLQ 168

Query: 54  RLVMYKDSAILVLNKPPK 1
           RL    DSAILVLNKPPK
Sbjct: 169 RL----DSAILVLNKPPK 182


>XP_010263262.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial isoform X1
           [Nelumbo nucifera]
          Length = 474

 Score =  223 bits (569), Expect = 4e-67
 Identities = 116/190 (61%), Positives = 141/190 (74%), Gaps = 3/190 (1%)
 Frame = -3

Query: 561 MVMKARHYSRTKSKVRXXXXXXXXPIIRVSNHIAHLGRPKAGPKPRQLLSLPPFPGGYPL 382
           +++  RHYSR    V          +IRVSN+IA LG PK  PKPRQLLSLPPFPG +PL
Sbjct: 10  ILLTVRHYSR----VSPPSPARATSVIRVSNNIARLGCPKEDPKPRQLLSLPPFPG-HPL 64

Query: 381 AGRKP---SGTGQHVTAISWLKYYFDDIPPPLIQSHFNKGLVKVECLDSVGLTNSRKGIA 211
            G+     +G   HVTAISW+KYYFDDIP P+IQSHFNKGLVK+ C +   L    +G  
Sbjct: 65  PGKSSVSVAGQSAHVTAISWVKYYFDDIPGPVIQSHFNKGLVKMACPNPGDLLMEEQGQM 124

Query: 210 KSMRKINHSEVMKKGARIYAPVTVTEAKINKRFDVIPTGTQYPNADEIQYLQRLVMYKDS 31
           +S++KI+ +EVM+ G+RIY PV+V E KI+KRFD IP+GT YPNADEI+YLQRLVMYKDS
Sbjct: 125 QSLKKISPNEVMEVGSRIYVPVSVIETKISKRFDTIPSGTLYPNADEIEYLQRLVMYKDS 184

Query: 30  AILVLNKPPK 1
           AI+VLNKPPK
Sbjct: 185 AIIVLNKPPK 194


>EYU23584.1 hypothetical protein MIMGU_mgv1a026780mg, partial [Erythranthe
           guttata]
          Length = 452

 Score =  220 bits (561), Expect = 4e-66
 Identities = 112/175 (64%), Positives = 134/175 (76%)
 Frame = -3

Query: 525 SKVRXXXXXXXXPIIRVSNHIAHLGRPKAGPKPRQLLSLPPFPGGYPLAGRKPSGTGQHV 346
           SK+R         ++RVSN+IAHLG PK GPKP+QLLSLPPFPG  PL GR  +   +HV
Sbjct: 1   SKIRPPPPASTKAVLRVSNNIAHLGAPKEGPKPKQLLSLPPFPGN-PLPGRHSTSV-EHV 58

Query: 345 TAISWLKYYFDDIPPPLIQSHFNKGLVKVECLDSVGLTNSRKGIAKSMRKINHSEVMKKG 166
           TAISWLKYYFDD+ PP+IQ HFNKGLV++ECL+S GL+ S  G   S RKI  SE+M++G
Sbjct: 59  TAISWLKYYFDDVIPPVIQHHFNKGLVRMECLNSSGLSESYTGQTMSTRKIKPSEIMEEG 118

Query: 165 ARIYAPVTVTEAKINKRFDVIPTGTQYPNADEIQYLQRLVMYKDSAILVLNKPPK 1
            R+Y PV+V E K++KRFDVIP+GT +PNADEI YLQRL    DSAILVLNKPPK
Sbjct: 119 DRVYVPVSVAENKVSKRFDVIPSGTLHPNADEIMYLQRL----DSAILVLNKPPK 169


>XP_007023655.2 PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Theobroma
           cacao]
          Length = 471

 Score =  219 bits (559), Expect = 1e-65
 Identities = 113/190 (59%), Positives = 137/190 (72%)
 Frame = -3

Query: 570 GQKMVMKARHYSRTKSKVRXXXXXXXXPIIRVSNHIAHLGRPKAGPKPRQLLSLPPFPGG 391
           G + +   RHYSR    V         P++RVSN +A+LG PK GPKPRQLLSLPPFPG 
Sbjct: 7   GWQFLSLVRHYSR----VAPPPPAYADPVLRVSNSVAYLGAPKQGPKPRQLLSLPPFPG- 61

Query: 390 YPLAGRKPSGTGQHVTAISWLKYYFDDIPPPLIQSHFNKGLVKVECLDSVGLTNSRKGIA 211
           YPL G+ P GT + VTAISWLKYYFD+IP   IQSHFNKGLV++E  ++      R G+ 
Sbjct: 62  YPLPGKNPGGTAR-VTAISWLKYYFDEIPDSAIQSHFNKGLVQMESSNAGDTCIERDGLM 120

Query: 210 KSMRKINHSEVMKKGARIYAPVTVTEAKINKRFDVIPTGTQYPNADEIQYLQRLVMYKDS 31
           K +RKI H+EVM+ G R++ PV++ E +I+KRFD IP+GT YPN DEI YLQRLV YKD 
Sbjct: 121 KPLRKIKHNEVMEVGTRVWVPVSIAETRISKRFDCIPSGTLYPNKDEIDYLQRLVKYKDY 180

Query: 30  AILVLNKPPK 1
           AILVLNKPPK
Sbjct: 181 AILVLNKPPK 190


>EOY26277.1 Pseudouridine synthase family protein [Theobroma cacao]
          Length = 471

 Score =  219 bits (559), Expect = 1e-65
 Identities = 113/190 (59%), Positives = 137/190 (72%)
 Frame = -3

Query: 570 GQKMVMKARHYSRTKSKVRXXXXXXXXPIIRVSNHIAHLGRPKAGPKPRQLLSLPPFPGG 391
           G + +   RHYSR    V         P++RVSN +A+LG PK GPKPRQLLSLPPFPG 
Sbjct: 7   GWQFLSLVRHYSR----VAPPPPAYADPVLRVSNSVAYLGAPKQGPKPRQLLSLPPFPG- 61

Query: 390 YPLAGRKPSGTGQHVTAISWLKYYFDDIPPPLIQSHFNKGLVKVECLDSVGLTNSRKGIA 211
           YPL G+ P GT + VTAISWLKYYFD+IP   IQSHFNKGLV++E  ++      R G+ 
Sbjct: 62  YPLPGKNPGGTAR-VTAISWLKYYFDEIPDSAIQSHFNKGLVQMESSNAGDTCIERDGLM 120

Query: 210 KSMRKINHSEVMKKGARIYAPVTVTEAKINKRFDVIPTGTQYPNADEIQYLQRLVMYKDS 31
           K +RKI H+EVM+ G R++ PV++ E +I+KRFD IP+GT YPN DEI YLQRLV YKD 
Sbjct: 121 KPLRKIKHNEVMEVGTRVWVPVSIAETRISKRFDCIPSGTLYPNKDEIDYLQRLVKYKDY 180

Query: 30  AILVLNKPPK 1
           AILVLNKPPK
Sbjct: 181 AILVLNKPPK 190


>XP_016577308.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial isoform X2
           [Capsicum annuum]
          Length = 424

 Score =  218 bits (554), Expect = 2e-65
 Identities = 120/202 (59%), Positives = 147/202 (72%), Gaps = 4/202 (1%)
 Frame = -3

Query: 594 WKKTLSEDGQKMVMKARHYSRTKSKVRXXXXXXXXPIIRVSNHIAHLGRPKAGPKPRQLL 415
           W K +S   + ++   R YSR+    R        P IRVSN+IAHLGR K G KP QLL
Sbjct: 3   WNKDMS---RCLLFLVRRYSRSVG--RSALANRCQPGIRVSNNIAHLGRQKEGAKPSQLL 57

Query: 414 SLPPFPGGYPLAGRK-PSGTGQ---HVTAISWLKYYFDDIPPPLIQSHFNKGLVKVECLD 247
           SLPPFPG +PL G+K P+G  Q   HVTAISW+KYYFD+IP  LIQSHF KGLV++EC +
Sbjct: 58  SLPPFPG-HPLPGKKAPTGPDQPSCHVTAISWIKYYFDEIPGSLIQSHFTKGLVQLECNE 116

Query: 246 SVGLTNSRKGIAKSMRKINHSEVMKKGARIYAPVTVTEAKINKRFDVIPTGTQYPNADEI 67
           S     S++G  + +RKI HSEVM+ GAR++ P++V EA+I+KR+DVIP+GT YPNADEI
Sbjct: 117 SF---TSKEGQTRFLRKIKHSEVMEVGARVHVPISVAEARISKRYDVIPSGTLYPNADEI 173

Query: 66  QYLQRLVMYKDSAILVLNKPPK 1
            YLQRLV YKD AILVLNKPPK
Sbjct: 174 AYLQRLVFYKDPAILVLNKPPK 195


>XP_016577307.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial isoform X1
           [Capsicum annuum]
          Length = 474

 Score =  218 bits (554), Expect = 7e-65
 Identities = 120/202 (59%), Positives = 147/202 (72%), Gaps = 4/202 (1%)
 Frame = -3

Query: 594 WKKTLSEDGQKMVMKARHYSRTKSKVRXXXXXXXXPIIRVSNHIAHLGRPKAGPKPRQLL 415
           W K +S   + ++   R YSR+    R        P IRVSN+IAHLGR K G KP QLL
Sbjct: 3   WNKDMS---RCLLFLVRRYSRSVG--RSALANRCQPGIRVSNNIAHLGRQKEGAKPSQLL 57

Query: 414 SLPPFPGGYPLAGRK-PSGTGQ---HVTAISWLKYYFDDIPPPLIQSHFNKGLVKVECLD 247
           SLPPFPG +PL G+K P+G  Q   HVTAISW+KYYFD+IP  LIQSHF KGLV++EC +
Sbjct: 58  SLPPFPG-HPLPGKKAPTGPDQPSCHVTAISWIKYYFDEIPGSLIQSHFTKGLVQLECNE 116

Query: 246 SVGLTNSRKGIAKSMRKINHSEVMKKGARIYAPVTVTEAKINKRFDVIPTGTQYPNADEI 67
           S     S++G  + +RKI HSEVM+ GAR++ P++V EA+I+KR+DVIP+GT YPNADEI
Sbjct: 117 SF---TSKEGQTRFLRKIKHSEVMEVGARVHVPISVAEARISKRYDVIPSGTLYPNADEI 173

Query: 66  QYLQRLVMYKDSAILVLNKPPK 1
            YLQRLV YKD AILVLNKPPK
Sbjct: 174 AYLQRLVFYKDPAILVLNKPPK 195


>XP_016433864.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like
           [Nicotiana tabacum] XP_016433865.1 PREDICTED: RNA
           pseudouridine synthase 3, mitochondrial-like [Nicotiana
           tabacum] XP_016433866.1 PREDICTED: RNA pseudouridine
           synthase 3, mitochondrial-like [Nicotiana tabacum]
           XP_016433867.1 PREDICTED: RNA pseudouridine synthase 3,
           mitochondrial-like [Nicotiana tabacum]
          Length = 478

 Score =  216 bits (549), Expect = 4e-64
 Identities = 115/202 (56%), Positives = 144/202 (71%), Gaps = 4/202 (1%)
 Frame = -3

Query: 594 WKKTLSEDGQKMVMKARHYSRTKSKVRXXXXXXXXPIIRVSNHIAHLGRPKAGPKPRQLL 415
           W K +S   + ++   R YSR+             P+IRVSN I HLGRPK G KP QLL
Sbjct: 3   WDKDVS---RCLLFLVRRYSRSVG--HSALANRGQPVIRVSNSITHLGRPKEGAKPSQLL 57

Query: 414 SLPPFPGGYPLAGRK----PSGTGQHVTAISWLKYYFDDIPPPLIQSHFNKGLVKVECLD 247
           SLPPFPG +PL G+K    P    +HVTAISW+KYYFD+IP  +IQSHFNKGLV++E  +
Sbjct: 58  SLPPFPG-HPLLGKKAATSPDQPSRHVTAISWIKYYFDEIPGSVIQSHFNKGLVQLEFNE 116

Query: 246 SVGLTNSRKGIAKSMRKINHSEVMKKGARIYAPVTVTEAKINKRFDVIPTGTQYPNADEI 67
           S   + S++G  + +RKI HSEVM+ GAR+Y P++V E KI+KR+DVIP+GT YPNADEI
Sbjct: 117 S---STSKEGQTRLLRKIKHSEVMEVGARVYVPISVAETKISKRYDVIPSGTLYPNADEI 173

Query: 66  QYLQRLVMYKDSAILVLNKPPK 1
            YLQRLV YKD A++VLNKPPK
Sbjct: 174 AYLQRLVFYKDPALIVLNKPPK 195


>XP_009620200.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial isoform X1
           [Nicotiana tomentosiformis] XP_009620208.1 PREDICTED:
           RNA pseudouridine synthase 3, mitochondrial isoform X1
           [Nicotiana tomentosiformis] XP_009620216.1 PREDICTED:
           RNA pseudouridine synthase 3, mitochondrial isoform X1
           [Nicotiana tomentosiformis] XP_009620223.1 PREDICTED:
           RNA pseudouridine synthase 3, mitochondrial isoform X1
           [Nicotiana tomentosiformis]
          Length = 478

 Score =  216 bits (549), Expect = 4e-64
 Identities = 115/202 (56%), Positives = 144/202 (71%), Gaps = 4/202 (1%)
 Frame = -3

Query: 594 WKKTLSEDGQKMVMKARHYSRTKSKVRXXXXXXXXPIIRVSNHIAHLGRPKAGPKPRQLL 415
           W K +S   + ++   R YSR+             P+IRVSN I HLGRPK G KP QLL
Sbjct: 3   WDKDVS---RCLLFLVRRYSRSVG--HSALANRGQPVIRVSNSITHLGRPKEGAKPSQLL 57

Query: 414 SLPPFPGGYPLAGRK----PSGTGQHVTAISWLKYYFDDIPPPLIQSHFNKGLVKVECLD 247
           SLPPFPG +PL G+K    P    +HVTAISW+KYYFD+IP  +IQSHFNKGLV++E  +
Sbjct: 58  SLPPFPG-HPLLGKKAATSPDQPSRHVTAISWIKYYFDEIPGSVIQSHFNKGLVQLEFNE 116

Query: 246 SVGLTNSRKGIAKSMRKINHSEVMKKGARIYAPVTVTEAKINKRFDVIPTGTQYPNADEI 67
           S   + S++G  + +RKI HSEVM+ GAR+Y P++V E KI+KR+DVIP+GT YPNADEI
Sbjct: 117 S---STSKEGQTRLLRKIKHSEVMEVGARVYVPISVAETKISKRYDVIPSGTLYPNADEI 173

Query: 66  QYLQRLVMYKDSAILVLNKPPK 1
            YLQRLV YKD A++VLNKPPK
Sbjct: 174 AYLQRLVFYKDPALIVLNKPPK 195


>XP_019176142.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Ipomoea
           nil]
          Length = 476

 Score =  214 bits (546), Expect = 1e-63
 Identities = 114/203 (56%), Positives = 141/203 (69%), Gaps = 4/203 (1%)
 Frame = -3

Query: 597 MWKKTLSEDGQKMVMKARHYSRTKSKVRXXXXXXXXPIIRVSNHIAHLGRPKAGPKPRQL 418
           MW + LS   +++    R YS      R         +IRVSN+IAHLG P+ G KP QL
Sbjct: 1   MWNRGLS---RRLFFVVRQYSSQ----RCDTSLNDDSVIRVSNNIAHLGCPREGSKPPQL 53

Query: 417 LSLPPFPGGYPLAGRK----PSGTGQHVTAISWLKYYFDDIPPPLIQSHFNKGLVKVECL 250
           +SLPPFPG + L G+K    P      +TAISWLKYYFD+IP P+IQSHFNKGLV+++C 
Sbjct: 54  MSLPPFPG-HCLPGKKSTTVPGRLSHRITAISWLKYYFDEIPGPVIQSHFNKGLVQMQCH 112

Query: 249 DSVGLTNSRKGIAKSMRKINHSEVMKKGARIYAPVTVTEAKINKRFDVIPTGTQYPNADE 70
           DS  +   +     SMRKI H EVM+ GAR+Y PV+V E+KI+KRFD+IP+GT YPNADE
Sbjct: 113 DSSSVERPKI----SMRKIKHHEVMEMGARVYVPVSVAESKISKRFDIIPSGTMYPNADE 168

Query: 69  IQYLQRLVMYKDSAILVLNKPPK 1
           I YLQRLV YKDSA++VLNKPPK
Sbjct: 169 IAYLQRLVFYKDSALIVLNKPPK 191


>XP_002267010.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Vitis
           vinifera]
          Length = 479

 Score =  213 bits (543), Expect = 3e-63
 Identities = 116/202 (57%), Positives = 141/202 (69%), Gaps = 3/202 (1%)
 Frame = -3

Query: 597 MWKKTLSEDGQKMVMKARHYSRTKSKVRXXXXXXXXPIIRVSNHIAHLGRPKAGPKPRQL 418
           MWK  L E  Q +    RHYSR    +         P+IRVSN++A LG PK GPKPRQL
Sbjct: 1   MWKNVLHEC-QGLFPVVRHYSR----IAPPRPASAAPVIRVSNNVAQLGSPKEGPKPRQL 55

Query: 417 LSLPPFPGGYPLAGRK---PSGTGQHVTAISWLKYYFDDIPPPLIQSHFNKGLVKVECLD 247
           LSLPPFP  +PL G+     SG   HVTAISW+KYYFD+IP  ++QSHFNKGLV +E  +
Sbjct: 56  LSLPPFPA-HPLPGKSLVNVSGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSN 114

Query: 246 SVGLTNSRKGIAKSMRKINHSEVMKKGARIYAPVTVTEAKINKRFDVIPTGTQYPNADEI 67
               +  ++G  K +RKI  +EVM+ G RIY PV+V EA+I+KRFD IP+GT +PNADEI
Sbjct: 115 LDDSSLEKEGQIKPLRKIKPNEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEI 174

Query: 66  QYLQRLVMYKDSAILVLNKPPK 1
           +YLQRLV YKD AILVLNKPPK
Sbjct: 175 EYLQRLVTYKDPAILVLNKPPK 196


>XP_019249221.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Nicotiana
           attenuata] XP_019249222.1 PREDICTED: RNA pseudouridine
           synthase 3, mitochondrial [Nicotiana attenuata]
           OIS99963.1 rna uridine synthase 3, mitochondrial
           [Nicotiana attenuata]
          Length = 478

 Score =  213 bits (542), Expect = 5e-63
 Identities = 115/202 (56%), Positives = 142/202 (70%), Gaps = 4/202 (1%)
 Frame = -3

Query: 594 WKKTLSEDGQKMVMKARHYSRTKSKVRXXXXXXXXPIIRVSNHIAHLGRPKAGPKPRQLL 415
           W K +S   + ++   R YSR+             P+IRVSN I HLGRPK G KP QLL
Sbjct: 3   WNKDVS---RCLLFLVRRYSRSVG--HSALANRGQPVIRVSNSITHLGRPKEGAKPSQLL 57

Query: 414 SLPPFPGGYPLAGRK----PSGTGQHVTAISWLKYYFDDIPPPLIQSHFNKGLVKVECLD 247
           SLPPFP  +PL G+K    P    +HVTAISW+KYYFD+IP  +IQSHFNKGLV++E  +
Sbjct: 58  SLPPFPS-HPLPGKKAATSPDQPSRHVTAISWIKYYFDEIPGSVIQSHFNKGLVQLEFNE 116

Query: 246 SVGLTNSRKGIAKSMRKINHSEVMKKGARIYAPVTVTEAKINKRFDVIPTGTQYPNADEI 67
           S   + S++G  +  RKI HSEVM+ GAR+Y P++V E KI+KR+DVIP+GT YPNADEI
Sbjct: 117 S---STSKEGQTRLPRKIKHSEVMEVGARVYVPISVAETKISKRYDVIPSGTLYPNADEI 173

Query: 66  QYLQRLVMYKDSAILVLNKPPK 1
            YLQRLV YKD AI+VLNKPPK
Sbjct: 174 AYLQRLVFYKDPAIIVLNKPPK 195


>KJB56430.1 hypothetical protein B456_009G119600 [Gossypium raimondii]
          Length = 265

 Score =  206 bits (524), Expect = 8e-63
 Identities = 113/192 (58%), Positives = 139/192 (72%), Gaps = 2/192 (1%)
 Frame = -3

Query: 570 GQKMVMKARHYSRTKSKVRXXXXXXXXPIIRVSNHIAHLGRPKAGPKPRQLLSLPPFPGG 391
           G  ++  ARHYSR    V         P+IRVSN++A+LG PK GPKPRQLLSLPPFPG 
Sbjct: 7   GHHLLSLARHYSR----VAPPPPAYADPVIRVSNNVAYLGSPKQGPKPRQLLSLPPFPGH 62

Query: 390 YPLAGRKPSGTGQHVTAISWLKYYFDDIPPPLIQSHFNKGLVKVECLDSVGLTN--SRKG 217
           + L G K S TG+ VTAISWLKYYFD+I    IQSHFNKGLV++E  +     +   R G
Sbjct: 63  H-LPG-KNSATGR-VTAISWLKYYFDEISDSAIQSHFNKGLVEIESSNPNAADSFIERDG 119

Query: 216 IAKSMRKINHSEVMKKGARIYAPVTVTEAKINKRFDVIPTGTQYPNADEIQYLQRLVMYK 37
             KS+RKI H+EVM+ GAR++ PV++ E +++KRFD IP+GT +PNADEI YL+RLV YK
Sbjct: 120 QMKSLRKIKHNEVMEVGARVWVPVSIAETRVSKRFDCIPSGTLHPNADEIDYLRRLVKYK 179

Query: 36  DSAILVLNKPPK 1
           D AILVLNKPPK
Sbjct: 180 DYAILVLNKPPK 191


>XP_016462039.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like
           [Nicotiana tabacum] XP_016462040.1 PREDICTED: RNA
           pseudouridine synthase 3, mitochondrial-like [Nicotiana
           tabacum] XP_016462041.1 PREDICTED: RNA pseudouridine
           synthase 3, mitochondrial-like [Nicotiana tabacum]
          Length = 478

 Score =  212 bits (540), Expect = 9e-63
 Identities = 115/202 (56%), Positives = 142/202 (70%), Gaps = 4/202 (1%)
 Frame = -3

Query: 594 WKKTLSEDGQKMVMKARHYSRTKSKVRXXXXXXXXPIIRVSNHIAHLGRPKAGPKPRQLL 415
           W K +S   + +    R YSR+             P+IRVSN I HLGRPK G KP QLL
Sbjct: 3   WNKDVS---RCLFFLVRRYSRSVG--HSAIANRRQPVIRVSNSITHLGRPKEGAKPSQLL 57

Query: 414 SLPPFPGGYPLAGRK----PSGTGQHVTAISWLKYYFDDIPPPLIQSHFNKGLVKVECLD 247
           SLPPFPG +PL G+K    P    +HVTAISW+KYYFD+I   +IQSHFNKGLV++E  +
Sbjct: 58  SLPPFPG-HPLPGKKAATSPDQPSRHVTAISWIKYYFDEILGSVIQSHFNKGLVQLEFNE 116

Query: 246 SVGLTNSRKGIAKSMRKINHSEVMKKGARIYAPVTVTEAKINKRFDVIPTGTQYPNADEI 67
           S   + S++G  + +RKI HSEVM+ GAR+Y P++V E KI+KR+DVIP+GT YPNADEI
Sbjct: 117 S---STSKEGQTRLLRKIKHSEVMEVGARVYVPISVAETKISKRYDVIPSGTLYPNADEI 173

Query: 66  QYLQRLVMYKDSAILVLNKPPK 1
            YLQRLV YKD AI+VLNKPPK
Sbjct: 174 AYLQRLVFYKDPAIIVLNKPPK 195


>XP_009804022.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Nicotiana
           sylvestris] XP_009804023.1 PREDICTED: RNA pseudouridine
           synthase 3, mitochondrial [Nicotiana sylvestris]
           XP_009804024.1 PREDICTED: RNA pseudouridine synthase 3,
           mitochondrial [Nicotiana sylvestris]
          Length = 478

 Score =  212 bits (539), Expect = 1e-62
 Identities = 115/202 (56%), Positives = 142/202 (70%), Gaps = 4/202 (1%)
 Frame = -3

Query: 594 WKKTLSEDGQKMVMKARHYSRTKSKVRXXXXXXXXPIIRVSNHIAHLGRPKAGPKPRQLL 415
           W K +S   + +    R YSR+             P+IRVSN I HLGRPK G KP QLL
Sbjct: 3   WNKDVS---RCLFFLVRRYSRSVG--HSAIANRRQPVIRVSNSITHLGRPKDGAKPSQLL 57

Query: 414 SLPPFPGGYPLAGRK----PSGTGQHVTAISWLKYYFDDIPPPLIQSHFNKGLVKVECLD 247
           SLPPFPG +PL G+K    P    +HVTAISW+KYYFD+I   +IQSHFNKGLV++E  +
Sbjct: 58  SLPPFPG-HPLPGKKAATSPDQPSRHVTAISWIKYYFDEILGSVIQSHFNKGLVQLEFNE 116

Query: 246 SVGLTNSRKGIAKSMRKINHSEVMKKGARIYAPVTVTEAKINKRFDVIPTGTQYPNADEI 67
           S   + S++G  + +RKI HSEVM+ GAR+Y P++V E KI+KR+DVIP+GT YPNADEI
Sbjct: 117 S---STSKEGQTRLLRKIKHSEVMEVGARVYVPISVAETKISKRYDVIPSGTLYPNADEI 173

Query: 66  QYLQRLVMYKDSAILVLNKPPK 1
            YLQRLV YKD AI+VLNKPPK
Sbjct: 174 AYLQRLVFYKDPAIIVLNKPPK 195


>KJB56433.1 hypothetical protein B456_009G119600 [Gossypium raimondii]
          Length = 307

 Score =  206 bits (524), Expect = 3e-62
 Identities = 113/192 (58%), Positives = 139/192 (72%), Gaps = 2/192 (1%)
 Frame = -3

Query: 570 GQKMVMKARHYSRTKSKVRXXXXXXXXPIIRVSNHIAHLGRPKAGPKPRQLLSLPPFPGG 391
           G  ++  ARHYSR    V         P+IRVSN++A+LG PK GPKPRQLLSLPPFPG 
Sbjct: 7   GHHLLSLARHYSR----VAPPPPAYADPVIRVSNNVAYLGSPKQGPKPRQLLSLPPFPGH 62

Query: 390 YPLAGRKPSGTGQHVTAISWLKYYFDDIPPPLIQSHFNKGLVKVECLDSVGLTN--SRKG 217
           + L G K S TG+ VTAISWLKYYFD+I    IQSHFNKGLV++E  +     +   R G
Sbjct: 63  H-LPG-KNSATGR-VTAISWLKYYFDEISDSAIQSHFNKGLVEIESSNPNAADSFIERDG 119

Query: 216 IAKSMRKINHSEVMKKGARIYAPVTVTEAKINKRFDVIPTGTQYPNADEIQYLQRLVMYK 37
             KS+RKI H+EVM+ GAR++ PV++ E +++KRFD IP+GT +PNADEI YL+RLV YK
Sbjct: 120 QMKSLRKIKHNEVMEVGARVWVPVSIAETRVSKRFDCIPSGTLHPNADEIDYLRRLVKYK 179

Query: 36  DSAILVLNKPPK 1
           D AILVLNKPPK
Sbjct: 180 DYAILVLNKPPK 191