BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00004889
         (5240 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_011098511.1 PREDICTED: DNA repair protein UVH3 [Sesamum indicum]  1124   0.0  
XP_016496710.1 PREDICTED: DNA repair protein UVH3-like [Nicotian...  1123   0.0  
XP_009588377.1 PREDICTED: DNA repair protein UVH3 isoform X1 [Ni...  1123   0.0  
XP_009801326.1 PREDICTED: DNA repair protein UVH3 [Nicotiana syl...  1122   0.0  
XP_016477170.1 PREDICTED: DNA repair protein UVH3-like isoform X...  1118   0.0  
XP_019261038.1 PREDICTED: DNA repair protein UVH3 [Nicotiana att...  1117   0.0  
XP_010271996.1 PREDICTED: DNA repair protein UVH3 isoform X1 [Ne...  1085   0.0  
KVI09079.1 5'-3' exonuclease, C-terminal domain-containing prote...  1051   0.0  
XP_017609403.1 PREDICTED: DNA repair protein UVH3 isoform X4 [Go...  1022   0.0  
XP_017609399.1 PREDICTED: DNA repair protein UVH3 isoform X3 [Go...  1018   0.0  
XP_017609393.1 PREDICTED: DNA repair protein UVH3 isoform X2 [Go...  1018   0.0  
XP_017609388.1 PREDICTED: DNA repair protein UVH3 isoform X1 [Go...  1018   0.0  
KHG04183.1 DNA repair UVH3 -like protein [Gossypium arboreum]        1018   0.0  
XP_016746864.1 PREDICTED: DNA repair protein UVH3-like isoform X...  1017   0.0  
KJB11465.1 hypothetical protein B456_001G260400 [Gossypium raimo...   965   0.0  
XP_016749880.1 PREDICTED: DNA repair protein UVH3-like isoform X...   906   0.0  
XP_016749879.1 PREDICTED: DNA repair protein UVH3-like isoform X...   906   0.0  
XP_012444053.1 PREDICTED: DNA repair protein UVH3 isoform X4 [Go...   902   0.0  
XP_012444035.1 PREDICTED: DNA repair protein UVH3 isoform X2 [Go...   902   0.0  
KJB11467.1 hypothetical protein B456_001G260400 [Gossypium raimo...   899   0.0  

>XP_011098511.1 PREDICTED: DNA repair protein UVH3 [Sesamum indicum]
          Length = 1522

 Score = 1124 bits (2908), Expect = 0.0
 Identities = 713/1497 (47%), Positives = 891/1497 (59%), Gaps = 42/1497 (2%)
 Frame = -1

Query: 5186 MGVHNLWELLAPVGRRVSVETLAGKKLAIDASIWMIQFMKAMRDEKGEMIRNAHLVGFFR 5007
            MGVH LWELLAPVGRRVSVETLAGKKLAIDASIWMIQFMKAMRDEKGEM+RNAH++GFFR
Sbjct: 1    MGVHGLWELLAPVGRRVSVETLAGKKLAIDASIWMIQFMKAMRDEKGEMVRNAHILGFFR 60

Query: 5006 RICKLLFLRVKPVFVFDGATPALKRRTVIARRRQRENAQTKIRKTAEKLLLNQLKAMRLK 4827
            RICKLL+LR KPVFVFDG TPALKRRTVIARRRQRENAQ KIRKTAEKLLLN LKAMRLK
Sbjct: 61   RICKLLYLRTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLLNHLKAMRLK 120

Query: 4826 ELQKNLQEQRQQDDSEPKMVSSKIIENAKGKR-VVDETIMANHLSEDENISAATCSREAL 4650
            EL  +L++QRQ++D+             KGKR ++ E  +  +  +  +  A   ++E +
Sbjct: 121  ELAADLEKQRQENDT-------------KGKRPIIQEPNILQNTEKGNDAEAVNYNQEEV 167

Query: 4649 DEMLAASIAAEEDGSFSPDASTSGAG--------VHYXXXXXXXXEMILPAMHGNVDPAV 4494
            DEMLAASIA EE+  FS DASTSGAG                   EMILP MHG VDPAV
Sbjct: 168  DEMLAASIAVEENEGFSFDASTSGAGDPDNKVFDGEEDEDDDEDEEMILPEMHGKVDPAV 227

Query: 4493 LASLPPSMQLDLLVQMRERLMAENRQRYQKVKKVPSRFSELQIQAYLKTVAFRREIDAVQ 4314
            LA+LPPSMQLDLLVQMRERLMAENRQ+YQKVKK P+RFSELQIQAYLKTVAFRREID VQ
Sbjct: 228  LAALPPSMQLDLLVQMRERLMAENRQKYQKVKKAPARFSELQIQAYLKTVAFRREIDGVQ 287

Query: 4313 KSAAGKGLGGMQTSRIASEANREFIFSSSFTGDKQVLASGGEVKTDARPTENSRVDVSSK 4134
            KSAAG+G+GG+QTSRIASE+ REFIFSSSFTGDKQ L S G+    A  ++   V+ S+ 
Sbjct: 288  KSAAGRGIGGVQTSRIASESKREFIFSSSFTGDKQALTSVGQEVVGADQSQPEPVNCSTD 347

Query: 4133 AFNDIVSITRS-----NQTEECSRDTAGTELPKGVETYVDERGRIRVSRGRAMGIRMTRD 3969
            A N+I+S + +      +TE+   D         VETY+DERGR+RVSR RA+GIRMTRD
Sbjct: 348  AVNEILSTSGAVGPTVVETEKAFHD--------DVETYLDERGRVRVSRVRALGIRMTRD 399

Query: 3968 LQRNLELMKESEQVRVPSEEYVNNEXXXXXXXXXXXXXXXXXXXXPKEG--NEAMLHTSQ 3795
            LQRNL+LMKE +Q +  +++  N E                          N  M     
Sbjct: 400  LQRNLDLMKEIDQEKADTDQEKNKESTTAELVDDLERSSDRIQHREVSDKINNRMNDEID 459

Query: 3794 SYEDPTLQGVASLEISFE-TNGEQKSGDDEDLFARLVAGETLMNIPADSSPAEKPSDLED 3618
              ++P +    S+EISFE T   +   DD+ LFA LVAG  +M+   D+S + K +   D
Sbjct: 460  KTDEPAVVNGTSIEISFEDTLDNECDNDDDKLFASLVAGNPVMDFAVDNSASVKQT--SD 517

Query: 3617 ISASDCEWEDGVIDGKSAVLNKQTVHELNSYLAHDDMEDDSGVEWEDGCASISKDVSPPP 3438
             SASD EWE+GVI+ K            ++YL    M  +  VEWE+    I    S  P
Sbjct: 518  HSASDFEWEEGVIEEKR-----------SAYLFEGGMRGEGEVEWEEEVQDIQLKSSSCP 566

Query: 3437 AECSESLSRGALEEEAEYQEAIRRSLVDLKGSGDSNASCENL---KSGDAGLIDNLGESS 3267
             E  +++ +GAL+EE++ QEAIRRSL D +G    N   EN    +  +    +++  + 
Sbjct: 567  DESQKTVRKGALQEESDIQEAIRRSLEDTRGCRSMNNFHENSICERGREVVTKEHMTHAC 626

Query: 3266 SIINEYSIPESSIPVKDNVKSCKSSFETQTNKMIDNQVKLDMPQHSNNSETQSTPRLGV- 3090
             + + Y   E    V  ++ + +  F   ++ +++N          N SE +S   + + 
Sbjct: 627  QVQSVYEGKEGP-EVDASMINVRQPF--GSSNILEN----------NCSEAKSAAFMDLK 673

Query: 3089 ---DLVGLELSPGDAPGRCSNSVQDKTNDLRTQEEIIERVKNCNPEKDILIQEQQGDIKS 2919
                 + L+LS  DA G   N   +K   L T + I E  + C  EK   I     D  S
Sbjct: 674  HEKSSLDLKLSSEDA-GISGNLTGEK---LVTPDTIPEEEELCVTEKQ-PIDTCSEDGNS 728

Query: 2918 SKVXXXXXXXXXXXXXXXTPYTLSGDLHTFT-------HVDEPHLELEAKVDDRLHESLI 2760
                              +    S  +H            D  H+  +A  DD  H    
Sbjct: 729  HAANKLEDTCSGLAAHNVSGSAFSSVIHELNDRALDSGSADAQHM-FQAASDD--HACDT 785

Query: 2759 SESSSFADVENKSDVENKSDFEPKSSPGHNVLHFEKEKYGGNSSFIENMVEQVPXXXXXX 2580
            ++    +  ++ +D++   D   +   G+     EKE+   NSSF+++  EQ        
Sbjct: 786  AKIGKISTDDSITDLDGVKDLGKEKIYGN--FSMEKEETTRNSSFMDDDKEQ-EIMEAHL 842

Query: 2579 XXXXXXXXXXXXXLGNEQRRLERNAESVSGEMFAECQELLQMFGLPYIIAPMEAEAQCAF 2400
                         LG+EQR+LERNAESVS EMFAECQELLQMFG+PYIIAPMEAEAQCAF
Sbjct: 843  EEEMLFLGIEREELGSEQRKLERNAESVSNEMFAECQELLQMFGIPYIIAPMEAEAQCAF 902

Query: 2399 MELANLVDGVVTDDSDAFLFGARSVYKNIFDDRKYVETYFMKDIESELGLDRDKLIRMAL 2220
            ME +NLVDGVVTDDSDAFLFGARSVYKNIFDDRKYVETY MKDIE+ELGLDR+KLI MAL
Sbjct: 903  MEQSNLVDGVVTDDSDAFLFGARSVYKNIFDDRKYVETYLMKDIENELGLDREKLIHMAL 962

Query: 2219 LLGSDYTEGISGIGIVNAIEVVNAFPEEDGLRQFRKWIESPDPSILGKFDVQEGCGSRKR 2040
            LLGSDYTEGISGIGIVNAIEVVNAFP++DGLR+FR+WIESPDP+ILGK DV+ G  SR++
Sbjct: 963  LLGSDYTEGISGIGIVNAIEVVNAFPKKDGLREFREWIESPDPTILGKLDVEAGGNSRRK 1022

Query: 2039 GSKIRENEKNKHGGKLEGSSDCDLNMXXXXXXXXXXKQIFMEKHRNVSKNWHIPSTFPSD 1860
            GSK  E+         EG S CD +           KQIFM+KHRNVSKNWHIP+TFPSD
Sbjct: 1023 GSKGSESMMGGSSSNTEGRS-CDQSEPQPVDEAKRIKQIFMDKHRNVSKNWHIPATFPSD 1081

Query: 1859 VVIAAYASPQVDNSTDSFSWGRPDLVTLHKVCWEKFGWGSKKADEVLLPVLKEYDKHETQ 1680
             VI AYASPQVD STD FSWG+PDL  L K+CWEKFGWG  K+DE+LLPVLKEY+KHETQ
Sbjct: 1082 AVILAYASPQVDKSTDPFSWGKPDLFVLRKLCWEKFGWGMSKSDELLLPVLKEYNKHETQ 1141

Query: 1679 LRLEAFYTFNEKFAKIRSKRIKSALKGVRGNKSEDVMNDSGEGDSKNRKRRKANYVEAKT 1500
            LRLEAFYTFNE+FAKIRSKRIK A+KG+ G KS D+M+D+    S + K+RK    E + 
Sbjct: 1142 LRLEAFYTFNERFAKIRSKRIKKAVKGITGEKSSDLMDDT-TPQSGSGKKRKVRPSENEA 1200

Query: 1499 NEVEKDS-GLRDHGVIKQKIAKILKPKQSRGRNSQGEAVEGIDTQPSEEASMTXXXXXXX 1323
            N+    S GL   G     I K    +   G+  +  +   ++         T       
Sbjct: 1201 NQSGGGSEGLDGCGTSDNTIKKTTVRRLKGGQTKEKTSRRNLELS-------TNVDNHLL 1253

Query: 1322 XXXXXXXXXXXXXXRKKNKINSCLEDVGT-SSDGEFNNETEERAPWEFERPSKVRRSERP 1146
                           ++ + NS  ED  T S DG ++   +E+     +   +VRRS R 
Sbjct: 1254 TRKESHIRGHLSGKGRRKQRNSSGEDTETGSDDGTYSGSDKEKQLDISKESFQVRRSGRI 1313

Query: 1145 RKAVNYTISNEDILEECCATTSKLDGFETSHNKVIGNSLSGKXXXXXXXXXXXXXXXXED 966
            RK VNYT++  D+ + C   +            V   SL  +                 D
Sbjct: 1314 RKTVNYTVA--DVFDNCEEESPNC----LEEGAVTKESLMDQVVGSVDKSNVNEHKEGND 1367

Query: 965  FLESGGGFCSEVTE---------PSQANLGDIGNAVVEDQLSEGYLKMGGGFCLEDD 822
             +  G   C + TE          SQ +   I + V +  LS+ YL+ GGGFC+E+D
Sbjct: 1368 -VGMGSRLCVDETEQASRMDEMRTSQFSDSQIDDPVNQSHLSKDYLQFGGGFCMEED 1423


>XP_016496710.1 PREDICTED: DNA repair protein UVH3-like [Nicotiana tabacum]
          Length = 1541

 Score = 1123 bits (2905), Expect = 0.0
 Identities = 696/1502 (46%), Positives = 895/1502 (59%), Gaps = 47/1502 (3%)
 Frame = -1

Query: 5186 MGVHNLWELLAPVGRRVSVETLAGKKLAIDASIWMIQFMKAMRDEKGEMIRNAHLVGFFR 5007
            MGV  LWELLAPVGRRVSVETLAGKKLAIDASIW+IQFMKAMRDEKGEM+RNAH++GFFR
Sbjct: 1    MGVQGLWELLAPVGRRVSVETLAGKKLAIDASIWIIQFMKAMRDEKGEMVRNAHILGFFR 60

Query: 5006 RICKLLFLRVKPVFVFDGATPALKRRTVIARRRQRENAQTKIRKTAEKLLLNQLKAMRLK 4827
            RICKLL+LR KPVFVFDG TPALKRRTVIARRRQRENAQ KIRKTAEKLLLN LKAMRLK
Sbjct: 61   RICKLLYLRTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLLNHLKAMRLK 120

Query: 4826 ELQKNLQEQRQQDDSEPKMVSSKIIENAKGKRVVDE-TIMANHLSEDENISAATCSREAL 4650
            EL  +L+ QR+Q+D             AKGK+V  E T    ++ E   ++A    REAL
Sbjct: 121  ELAVDLENQRKQND-------------AKGKKVSTEATGTVKNVDEGNGLAAENYDREAL 167

Query: 4649 DEMLAASIAAEEDGSFSPDASTSGAGVH-YXXXXXXXXEMILPAMHGNVDPAVLASLPPS 4473
            DEMLAASI AEED +F+ +ASTS AG H          EMILP+M G VDP+VLA+LPPS
Sbjct: 168  DEMLAASIQAEEDWNFTGNASTSCAGDHAENDNTDEDEEMILPSMQGKVDPSVLAALPPS 227

Query: 4472 MQLDLLVQMRERLMAENRQRYQKVKKVPSRFSELQIQAYLKTVAFRREIDAVQKSAAGKG 4293
            MQLDLL QMRERLMAENRQ+YQKVKK P +FSELQIQAYLKTVAFRREID VQKSAAGKG
Sbjct: 228  MQLDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQAYLKTVAFRREIDEVQKSAAGKG 287

Query: 4292 LGGMQTSRIASEANREFIFSSSFTGDKQVLASGGEVKTDARPTENSRVDVSSKAFNDIVS 4113
            +GG++T RIASEANREFIFSSSFTGDK VL S G+ +T  +P+E    +    +     +
Sbjct: 288  IGGVRTKRIASEANREFIFSSSFTGDKDVLVSAGKDQTRKKPSEVQTENSLPNSATASDA 347

Query: 4112 ITRSNQTEECSRDTAGTELPKGVETYVDERGRIRVSRGRAMGIRMTRDLQRNLELMKESE 3933
             TR +   E      G+     VETY+DERG +RVSR RAMG+RMTRDLQRNL+++KE E
Sbjct: 348  ATRKSSVLESIVTEPGSAFNDDVETYLDERGHLRVSRLRAMGVRMTRDLQRNLDMIKEIE 407

Query: 3932 QVRVPSEE---YVNNEXXXXXXXXXXXXXXXXXXXXPKEGNEAMLHTSQSYEDPTLQGVA 3762
            +  +   +   YV                           N+    ++   E+  L+   
Sbjct: 408  EESLSRNKDFSYVPAINDTAVHSPGNVSDTIPQLNSSNPDNDGKACSNNKSEESELKSGT 467

Query: 3761 SLEISFETNGEQK--SGDDEDLFARLVAGETLMNIPADSSPAEKPSDLEDISASDCEWED 3588
            S++ISFE N      + DD+D+FA LVAG+  M    D SP++K S L+  SASD EWE+
Sbjct: 468  SIQISFEDNFAHNCANDDDDDIFAHLVAGDPAMEFSIDHSPSKKQS-LD--SASDVEWEE 524

Query: 3587 GVIDGKSAVLNKQTVHELNSYLAHDDMEDDSGVEWEDGCASISKDVSPPPAECSESLSRG 3408
            G+I+ K  +L+  +  E  + L  D M+D+  VEWE+ C  I K+ S  P + S S S+G
Sbjct: 525  GLIEEKRDLLSNNSQGESQATLEKDGMDDEVEVEWEEECVDICKERSLFPFD-SRSASKG 583

Query: 3407 ALEEEAEYQEAIRRSLVDLKGSGDSNASCENLKS-------------GDAGLIDNLGESS 3267
            ALEEEA+YQEA+RRSL DL+     + S EN  S             G  G  +N  ++ 
Sbjct: 584  ALEEEADYQEAVRRSLEDLRDHRCIDKSHENDMSEEASQMVTHGIVIGSDGQDNNCPKTH 643

Query: 3266 SIINEYSIPESSIPVKDNVKSCKSSFETQTNKMIDNQVKLDMPQHSN---------NSET 3114
             I+ +  +P S I       +   +   + N  + NQ+      +S           ++ 
Sbjct: 644  EILQQKELP-SEIQTAHLHDTVHETDIAEGNNCLGNQLGEQFQANSGYRNMQIEEVTNQA 702

Query: 3113 QSTPRLGVDLVGLELSPGDAPGRCSNSVQDKTNDLRTQEEIIERVKNCNPEK-DILIQEQ 2937
              T    + +   +   G       N + D T ++ +  +    V +    + + L   +
Sbjct: 703  DRTLHCDIRMGPTDPLDGSEVRMIRNKIADTTVEVSSNGKSASDVTSIEQARFNELPNAR 762

Query: 2936 QGDIKSSKVXXXXXXXXXXXXXXXTPYT--LSGDLHTFTHVDEPHLELEAKVDDRLHESL 2763
              D +  +                  +T     D ++   +DE     E   DD L E  
Sbjct: 763  TSDAQQYEAGAASHHYTHESTELAKAFTEGFISDANSAQKLDE-----EGTCDDPLLEG- 816

Query: 2762 ISESSSFADVENKSDVENKSDFEPKSSPGHNVLHFEKEKYGGNSSFIENMVEQVPXXXXX 2583
                  F ++++    E++           +VL  E+EK G     +E   E        
Sbjct: 817  ---KDLFGNLDSAGSKEDQKVMMASLEEEMDVLDKEREKLGDEQRKLERNAE-------- 865

Query: 2582 XXXXXXXXXXXXXXLGNEQRRLERNAESVSGEMFAECQELLQMFGLPYIIAPMEAEAQCA 2403
                                       SVS EMFAECQELLQMFGLPYIIAPMEAEAQCA
Sbjct: 866  ---------------------------SVSSEMFAECQELLQMFGLPYIIAPMEAEAQCA 898

Query: 2402 FMELANLVDGVVTDDSDAFLFGARSVYKNIFDDRKYVETYFMKDIESELGLDRDKLIRMA 2223
            +MEL NLVDGVVTDDSDAFLFGAR+VYKNIFDDRKYVETYFMKD+E+ELGLDR+KLIR A
Sbjct: 899  YMELTNLVDGVVTDDSDAFLFGARNVYKNIFDDRKYVETYFMKDVENELGLDREKLIRTA 958

Query: 2222 LLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLRQFRKWIESPDPSILGKFDVQEGCGSRK 2043
            L LGSDYTEG+SGIGIVNAIEV+NAFPEEDGL++FR+W+ESPDPSILG  D Q G  +RK
Sbjct: 959  LFLGSDYTEGVSGIGIVNAIEVLNAFPEEDGLQKFREWVESPDPSILGGLDAQAGSSTRK 1018

Query: 2042 RGSKIRENEKNKHGGKLEGSSDCDLNMXXXXXXXXXXKQIFMEKHRNVSKNWHIPSTFPS 1863
            RGS++ + + +     +EG+S  D N+          KQIFM KHRN+SKNWHIPS+FPS
Sbjct: 1019 RGSEVGDPDMSCSRSNVEGNSASDENV-KSEDRVQKLKQIFMNKHRNISKNWHIPSSFPS 1077

Query: 1862 DVVIAAYASPQVDNSTDSFSWGRPDLVTLHKVCWEKFGWGSKKADEVLLPVLKEYDKHET 1683
            D VI+AYASP+VD ST+ F+WG+PD+  L KVCWEKFGW S+KADE+L+ VLKEY+KHET
Sbjct: 1078 DAVISAYASPRVDKSTEHFAWGKPDVSVLRKVCWEKFGWSSQKADELLVSVLKEYNKHET 1137

Query: 1682 QLRLEAFYTFNEKFAKIRSKRIKSALKGVRGNKSEDVMNDSGEGDSKNRKRRKANYVEAK 1503
            QLRLEAFYTFNE+FAKIRSKRIK A+K + GNKS ++M+ S +   +N K+R+  +   +
Sbjct: 1138 QLRLEAFYTFNERFAKIRSKRIKKAVKLMTGNKSMNLMDASVQDAPENLKKRELKFNNVE 1197

Query: 1502 TNEVEKD-SGLRDHGV-IKQKIAKILKPKQSRGRNSQGEAVEGIDTQPSEEASMTXXXXX 1329
              ++E   +GL   G   ++   K    KQSR R  +GE ++    +P E +        
Sbjct: 1198 EEKIEDPLTGLESAGADYEETKTKRSVGKQSRKR--KGEHLQPEHLEPPEGSGSKQNTNK 1255

Query: 1328 XXXXXXXXXXXXXXXXRKKNKINSCLEDVGTSSDGEFNNETEERAPWE-FERPSKVRRSE 1152
                             K +K  SC     TSS+GE +++ E+++  E  E+P + RRSE
Sbjct: 1256 KSSGSIRGGRKTARSVGKASK-KSCSRSFKTSSEGEKDSDIEQQSQIEKLEKPKQARRSE 1314

Query: 1151 RPRKAVNYTISNEDILEEC-----CATTSKLDGFETSHNKVI-------GNSLSGKXXXX 1008
            R RK VNY+   +D  ++       +TT KL+  E+  +  I        ++++      
Sbjct: 1315 RHRKIVNYSEGRDDESDKVDKDDGDSTTDKLERRESGADVGIVERCPDDSSNMTENDVSN 1374

Query: 1007 XXXXXXXXXXXXEDFLESGGGFCSEVTEPSQANLGDIGNAVVEDQLSEGYLKMGGGFCLE 828
                           + +GG       +PS    G++ + V  D LS+ YLKMGGGFCLE
Sbjct: 1375 DYCPQGLSNPETSADVNTGGAEMESAVQPS---FGEMDDPVPGDLLSKEYLKMGGGFCLE 1431

Query: 827  DD 822
            +D
Sbjct: 1432 ED 1433


>XP_009588377.1 PREDICTED: DNA repair protein UVH3 isoform X1 [Nicotiana
            tomentosiformis]
          Length = 1542

 Score = 1123 bits (2904), Expect = 0.0
 Identities = 702/1534 (45%), Positives = 908/1534 (59%), Gaps = 56/1534 (3%)
 Frame = -1

Query: 5186 MGVHNLWELLAPVGRRVSVETLAGKKLAIDASIWMIQFMKAMRDEKGEMIRNAHLVGFFR 5007
            MGV  LW+LLAPVGRRVSVETLAGKKLAIDASIW+IQFMKAMRDEKGEM+RNAH++GFFR
Sbjct: 1    MGVQGLWDLLAPVGRRVSVETLAGKKLAIDASIWIIQFMKAMRDEKGEMVRNAHILGFFR 60

Query: 5006 RICKLLFLRVKPVFVFDGATPALKRRTVIARRRQRENAQTKIRKTAEKLLLNQLKAMRLK 4827
            RICKLL+LR KPVFVFDG TPALKRRTVIARRRQRENAQ KIRKTAEKLLLN LKAMRLK
Sbjct: 61   RICKLLYLRTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLLNHLKAMRLK 120

Query: 4826 ELQKNLQEQRQQDDSEPKMVSSKIIENAKGKRVVDETIMANHLSEDENISAATCSREALD 4647
            EL  +L+ QR+Q+D++ K VSS+     K            +++E   ++A    +EALD
Sbjct: 121  ELAGDLENQRKQNDAKGKKVSSEATGTVK------------NVAEGNGLAAENYDKEALD 168

Query: 4646 EMLAASIAAEEDGSFSPDASTSGAG-VHYXXXXXXXXEMILPAMHGNVDPAVLASLPPSM 4470
            EMLAASI AEED +F+ DASTS AG            EMILPAM G VDP+VLA+LPPSM
Sbjct: 169  EMLAASIQAEEDWNFADDASTSCAGNPAENDNTDEDEEMILPAMQGKVDPSVLAALPPSM 228

Query: 4469 QLDLLVQMRERLMAENRQRYQKVKKVPSRFSELQIQAYLKTVAFRREIDAVQKSAAGKGL 4290
            QLDLL QMRERLMAENRQ+YQKVKKVP +FSELQIQAYLKTVAFRREID VQKSAAG+G+
Sbjct: 229  QLDLLGQMRERLMAENRQKYQKVKKVPEKFSELQIQAYLKTVAFRREIDEVQKSAAGRGI 288

Query: 4289 GGMQTSRIASEANREFIFSSSFTGDKQVLASGGEVKTDARPTENSRVDVSSKAFNDIVSI 4110
            GG++T RIASEANREFIFSSSFTGDK VLAS GE  T  +P+E    +    +     + 
Sbjct: 289  GGVRTKRIASEANREFIFSSSFTGDKDVLASAGEDHTRKKPSEVQTENSLPNSATASDAA 348

Query: 4109 TRSNQTEECSRDTAGTELPKGVETYVDERGRIRVSRGRAMGIRMTRDLQRNLELMKESEQ 3930
            T+ +   E      G+     VETY+DERG +RVSR RAMG+RMTRDLQRNL+++KE E+
Sbjct: 349  TKKSSVLESIVTEPGSAFNDDVETYLDERGHLRVSRLRAMGVRMTRDLQRNLDMIKEIEE 408

Query: 3929 VRVPSEEYVNNEXXXXXXXXXXXXXXXXXXXXPKEG---NEAMLHTSQSYEDPTLQGVAS 3759
              +   +  ++                            N+  + ++   E+  L+   S
Sbjct: 409  ESLSRNKDFSDVPTVSDTAVHSPGNVSDTIPQLNSSNPDNDGKVCSNNKSEESELKSGTS 468

Query: 3758 LEISFETN-GEQKSGDDEDLFARLVAGETLMNIPADSSPAEKPSDLEDISASDCEWEDGV 3582
            ++ISFE N     + DD+D+FA LVAG+  M    D S ++K S L+  SASD EWE+GV
Sbjct: 469  IQISFEDNFAHDCANDDDDIFAHLVAGDPAMEFSIDHSLSKKQS-LD--SASDVEWEEGV 525

Query: 3581 IDGKSAVLNKQTVHELNSYLAHDDMEDDSGVEWEDGCASISKDVSPPPAECSESLSRGAL 3402
            I+ K  +L+  +  E  + L  D ++D+  VEWE+ C  I K+ S  P + S   S+GAL
Sbjct: 526  IEEKYDLLSNNSQGESQATLEKDGIDDEVEVEWEEECVDICKEPSLFPFD-SRIASKGAL 584

Query: 3401 EEEAEYQEAIRRSLVDLKGSGDSNASCENLKS-------------GDAGLIDNLGESSSI 3261
            EEEA YQEA+RRSL DL+     + S EN  S             G  G  +N  +S  I
Sbjct: 585  EEEANYQEAVRRSLEDLRDHRCIDKSHENEMSEEAVQMVTQGIIIGSDGQDNNCPKSYEI 644

Query: 3260 INEYSIPESSIPVKDNVKSCKSSFETQTNKMIDNQVKLDMPQHS-------NNSETQSTP 3102
            + +  +P S I       +   +   + N  + NQ+      +S         +  Q+  
Sbjct: 645  LQQKELP-SEIQTAHLHDTVHETDIAEGNNCLGNQLGEQFQANSGYRNMQIEEATDQADR 703

Query: 3101 RLGVDLVGLELSPGDAPGRCSNSVQDKTNDLRTQEEIIERVKNCNPEKDILIQEQQGDIK 2922
             L  D+     +P D  G   + ++ K  D  T  E+    K+  P+   + Q +  ++ 
Sbjct: 704  NLHCDIRMGPTAPLD--GSEVSMIRKKIAD--TTVEVSSNTKSA-PDVTSIEQARFNELP 758

Query: 2921 SSKVXXXXXXXXXXXXXXXTPYTLSGDLHTFTHVDE-----------PHLELEAKVDDR- 2778
            +++                  Y      H +TH                     K+DD  
Sbjct: 759  NART------------SDAQQYESGAASHHYTHESTELAKAFTEGFISDTNSAQKLDDEG 806

Query: 2777 -LHESLISESSSFADVENKSDVENKSDFEPKSSPGHNVLHFEKEKYGGNSSFIENMVEQV 2601
               + L+     F ++++    E++           +VL  E+EK G     +E      
Sbjct: 807  TCDDPLLEGKDLFGNLDSAGSKEDQKVMMTSLEEEMHVLDKEREKLGDEQRKLE------ 860

Query: 2600 PXXXXXXXXXXXXXXXXXXXLGNEQRRLERNAESVSGEMFAECQELLQMFGLPYIIAPME 2421
                                         RNAESVS EMFAECQELLQMFGLPYIIAPME
Sbjct: 861  -----------------------------RNAESVSSEMFAECQELLQMFGLPYIIAPME 891

Query: 2420 AEAQCAFMELANLVDGVVTDDSDAFLFGARSVYKNIFDDRKYVETYFMKDIESELGLDRD 2241
            AEAQCA+MEL NLVDGVVTDDSDAFLFGAR+VYKNIFDDRKYVETYFMKD+E+ELGLDR+
Sbjct: 892  AEAQCAYMELTNLVDGVVTDDSDAFLFGARNVYKNIFDDRKYVETYFMKDVENELGLDRE 951

Query: 2240 KLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLRQFRKWIESPDPSILGKFDVQE 2061
            K+IRMAL LGSDYTEG+SGIGIVNAIEV+NAFPEEDGL++FR+W+ESPDPSILG  D Q 
Sbjct: 952  KIIRMALFLGSDYTEGVSGIGIVNAIEVLNAFPEEDGLQKFREWVESPDPSILGGLDAQA 1011

Query: 2060 GCGSRKRGSKIRENEKNKHGGKLEGSSDCDLNMXXXXXXXXXXKQIFMEKHRNVSKNWHI 1881
               +RKRGS++ + + +     +EG+S  D N+          KQIFM KHRN+SKNWHI
Sbjct: 1012 SSSTRKRGSEVGDPDMSCSSSNVEGNSASDENV-KSEDRVQKLKQIFMNKHRNISKNWHI 1070

Query: 1880 PSTFPSDVVIAAYASPQVDNSTDSFSWGRPDLVTLHKVCWEKFGWGSKKADEVLLPVLKE 1701
            PS+FPSD VI+AYASP+VD ST+ F+WG+PD+  L KVCWEKFGW S+KADE+L+PVLKE
Sbjct: 1071 PSSFPSDAVISAYASPRVDKSTEPFAWGKPDVSVLRKVCWEKFGWSSQKADELLVPVLKE 1130

Query: 1700 YDKHETQLRLEAFYTFNEKFAKIRSKRIKSALKGVRGNKSEDVMNDSGEGDSKNRKRRKA 1521
            Y+KHETQLRLEAFYTFNE+FAKIRSKRIK A+K + GNKS ++M+ S +      K+R+ 
Sbjct: 1131 YNKHETQLRLEAFYTFNERFAKIRSKRIKKAVKHMTGNKSMNLMDASVQDAPGTFKKREL 1190

Query: 1520 NYVEAKTNEVEKD-SGLRDHGV-IKQKIAKILKPKQSRGRNSQGEAVEGIDTQPSEEASM 1347
             +   +  ++E    GL   G   ++   K    KQSR R  +GE ++    +P E +  
Sbjct: 1191 KFNNVEEEKIEDPLMGLESAGADYEETKTKRSVGKQSRKR--KGEHLQPEHLEPPEGSGS 1248

Query: 1346 TXXXXXXXXXXXXXXXXXXXXXRKKNKINSCLEDVGTSSDGEFNNETEERAPWE-FERPS 1170
                                   K +K  SC     TSS+G  +N+ E+++  E  E+P 
Sbjct: 1249 KQNTNKKSSGGIGGGRKTARSAGKASK-KSCSRSFKTSSEGGKDNDIEQQSQIEKLEKPK 1307

Query: 1169 KVRRSERPRKAVNYTISNEDILEEC-----CATTSKLDGFETSHNKVI-------GNSLS 1026
            + RRSER RK VNY+   +D  ++       +TT KL+  E+  +  I        ++++
Sbjct: 1308 QARRSERHRKIVNYSEVRDDDSDKVDKDDGDSTTDKLERRESGADVGIAERCPDDSSNMT 1367

Query: 1025 GKXXXXXXXXXXXXXXXXEDFLESGGGFCSEVTEPSQANLGDIGNAVVEDQLSEGYLKMG 846
                                 +++GG       +PS    G++ + V  D LS  YLKMG
Sbjct: 1368 ENDVSNDYCPEGLSNPETSADVDTGGAEMESAVQPS---FGEMDDPVPGDLLSNEYLKMG 1424

Query: 845  GGFCLEDDAARGNTD---EYPGKAAESSQVNSRS 753
            GGFCLE+D      +     P  + E S +N+ S
Sbjct: 1425 GGFCLEEDDGAMEHEINASSPILSVECSDINNSS 1458


>XP_009801326.1 PREDICTED: DNA repair protein UVH3 [Nicotiana sylvestris]
          Length = 1543

 Score = 1122 bits (2902), Expect = 0.0
 Identities = 696/1504 (46%), Positives = 894/1504 (59%), Gaps = 49/1504 (3%)
 Frame = -1

Query: 5186 MGVHNLWELLAPVGRRVSVETLAGKKLAIDASIWMIQFMKAMRDEKGEMIRNAHLVGFFR 5007
            MGV  LWELLAPVGRRVSVETLAGKKLAIDASIW+IQFMKAMRDEKGEM+RNAH++GFFR
Sbjct: 1    MGVQGLWELLAPVGRRVSVETLAGKKLAIDASIWIIQFMKAMRDEKGEMVRNAHILGFFR 60

Query: 5006 RICKLLFLRVKPVFVFDGATPALKRRTVIARRRQRENAQTKIRKTAEKLLLNQLKAMRLK 4827
            RICKLL+LR KPVFVFDG TPALKRRTVIARRRQRENAQ KIRKTAEKLLLN LKAMRLK
Sbjct: 61   RICKLLYLRTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLLNHLKAMRLK 120

Query: 4826 ELQKNLQEQRQQDDSEPKMVSSKIIENAKGKRVVDE-TIMANHLSEDENISAATCSREAL 4650
            EL  +L+ QR+Q+D             AKGK+V  E T    ++ E   ++A    REAL
Sbjct: 121  ELAVDLENQRKQND-------------AKGKKVSTEATGTVKNVDEGNGLAAENYDREAL 167

Query: 4649 DEMLAASIAAEEDGSFSPDASTSGAGVH-YXXXXXXXXEMILPAMHGNVDPAVLASLPPS 4473
            DEMLAASI AEED +F+ +ASTS AG H          EMILP+M G VDP+VLA+LPPS
Sbjct: 168  DEMLAASIQAEEDWNFTGNASTSCAGDHAENDNTDEDEEMILPSMQGKVDPSVLAALPPS 227

Query: 4472 MQLDLLVQMRERLMAENRQRYQKVKKVPSRFSELQIQAYLKTVAFRREIDAVQKSAAGKG 4293
            MQLDLL QMRERLMAENRQ+YQKVKK P +FSELQIQAYLKTVAFRREID VQKSAAGKG
Sbjct: 228  MQLDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQAYLKTVAFRREIDEVQKSAAGKG 287

Query: 4292 LGGMQTSRIASEANREFIFSSSFTGDKQVLASGGEVKTDARPTENSRVDVSSKAFNDIVS 4113
            +GG++T RIASEANREFIFSSSFTGDK VL S G+ +T  +P+E    +    +     +
Sbjct: 288  IGGVRTKRIASEANREFIFSSSFTGDKDVLVSAGKDQTRKKPSEVQTENSLPNSATASDA 347

Query: 4112 ITRSNQTEECSRDTAGTELPKGVETYVDERGRIRVSRGRAMGIRMTRDLQRNLELMKESE 3933
             TR +   E      G+     VETY+DERG +RVSR RAMG+RMTRDLQRNL+++KE E
Sbjct: 348  ATRKSSVLESIVTEPGSAFNDDVETYLDERGHLRVSRLRAMGVRMTRDLQRNLDMIKEIE 407

Query: 3932 QVRVPSEE---YVNNEXXXXXXXXXXXXXXXXXXXXPKEGNEAMLHTSQSYEDPTLQGVA 3762
            +  +   +   YV                           N+    ++   E+  L+   
Sbjct: 408  EESLSRNKDFSYVPAINDTAVHSPGNVSDTIPQLNSSNPDNDGKACSNNKSEESELKSGT 467

Query: 3761 SLEISFETNGEQK----SGDDEDLFARLVAGETLMNIPADSSPAEKPSDLEDISASDCEW 3594
            S++ISFE N          DD+D+FA LVAG+  M    D SP++K S L+  SASD EW
Sbjct: 468  SIQISFEDNFAHNCANDDDDDDDIFAHLVAGDPAMEFSIDHSPSKKQS-LD--SASDVEW 524

Query: 3593 EDGVIDGKSAVLNKQTVHELNSYLAHDDMEDDSGVEWEDGCASISKDVSPPPAECSESLS 3414
            E+G+I+ K  +L+  +  E  + L  D M+D+  VEWE+ C  I K+ S  P + S S S
Sbjct: 525  EEGLIEEKRDLLSNNSQGESQATLEKDGMDDEVEVEWEEECVDICKERSLFPFD-SRSAS 583

Query: 3413 RGALEEEAEYQEAIRRSLVDLKGSGDSNASCENLKS-------------GDAGLIDNLGE 3273
            +GALEEEA+YQEA+RRSL DL+     + S EN  S             G  G  +N  +
Sbjct: 584  KGALEEEADYQEAVRRSLEDLRDHRCIDKSHENDMSEEASQMVTHGIVIGSDGQDNNCPK 643

Query: 3272 SSSIINEYSIPESSIPVKDNVKSCKSSFETQTNKMIDNQVKLDMPQHSN---------NS 3120
            +  I+ +  +P S I       +   +   + N  + NQ+      +S           +
Sbjct: 644  THEILQQKELP-SEIQTAHLHDTVHETDIAEGNNCLGNQLGEQFQANSGYRNMQIEEVTN 702

Query: 3119 ETQSTPRLGVDLVGLELSPGDAPGRCSNSVQDKTNDLRTQEEIIERVKNCNPEK-DILIQ 2943
            +   T    + +   +   G       N + D T ++ +  +    V +    + + L  
Sbjct: 703  QADRTLHCDIRMGPTDPLDGSEVRMIRNKIADTTVEVSSNGKSASDVTSIEQARFNELPN 762

Query: 2942 EQQGDIKSSKVXXXXXXXXXXXXXXXTPYT--LSGDLHTFTHVDEPHLELEAKVDDRLHE 2769
             +  D +  +                  +T     D ++   +DE     E   DD L E
Sbjct: 763  ARTSDAQQYEAGAASHHYTHESTELAKAFTEGFISDANSAQKLDE-----EGTCDDPLLE 817

Query: 2768 SLISESSSFADVENKSDVENKSDFEPKSSPGHNVLHFEKEKYGGNSSFIENMVEQVPXXX 2589
                    F ++++    E++           +VL  E+EK G     +E   E      
Sbjct: 818  G----KDLFGNLDSAGSKEDQKVMMASLEEEMDVLDKEREKLGDEQRKLERNAE------ 867

Query: 2588 XXXXXXXXXXXXXXXXLGNEQRRLERNAESVSGEMFAECQELLQMFGLPYIIAPMEAEAQ 2409
                                         SVS EMFAECQELLQMFGLPYIIAPMEAEAQ
Sbjct: 868  -----------------------------SVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 898

Query: 2408 CAFMELANLVDGVVTDDSDAFLFGARSVYKNIFDDRKYVETYFMKDIESELGLDRDKLIR 2229
            CA+MEL NLVDGVVTDDSDAFLFGAR+VYKNIFDDRKYVETYFMKD+E+ELGLDR+KLIR
Sbjct: 899  CAYMELTNLVDGVVTDDSDAFLFGARNVYKNIFDDRKYVETYFMKDVENELGLDREKLIR 958

Query: 2228 MALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLRQFRKWIESPDPSILGKFDVQEGCGS 2049
             AL LGSDYTEG+SGIGIVNAIEV+NAFPEEDGL++FR+W+ESPDPSILG  D Q G  +
Sbjct: 959  TALFLGSDYTEGVSGIGIVNAIEVLNAFPEEDGLQKFREWVESPDPSILGGLDAQAGSST 1018

Query: 2048 RKRGSKIRENEKNKHGGKLEGSSDCDLNMXXXXXXXXXXKQIFMEKHRNVSKNWHIPSTF 1869
            RKRGS++ + + +     +EG+S  D N+          KQIFM KHRN+SKNWHIPS+F
Sbjct: 1019 RKRGSEVGDPDMSCSRSNVEGNSASDENV-KSEDRVQKLKQIFMNKHRNISKNWHIPSSF 1077

Query: 1868 PSDVVIAAYASPQVDNSTDSFSWGRPDLVTLHKVCWEKFGWGSKKADEVLLPVLKEYDKH 1689
            PSD VI+AYASP+VD ST+ F+WG+PD+  L KVCWEKFGW S+KADE+L+ VLKEY+KH
Sbjct: 1078 PSDAVISAYASPRVDKSTEPFAWGKPDVSVLRKVCWEKFGWSSQKADELLVSVLKEYNKH 1137

Query: 1688 ETQLRLEAFYTFNEKFAKIRSKRIKSALKGVRGNKSEDVMNDSGEGDSKNRKRRKANYVE 1509
            ETQLRLEAFYTFNE+FAKIRSKRIK A+K + GNKS ++M+ S +   +N K+R+  +  
Sbjct: 1138 ETQLRLEAFYTFNERFAKIRSKRIKKAVKLMTGNKSMNLMDASVQDAPENLKKRELKFNN 1197

Query: 1508 AKTNEVEKD-SGLRDHGV-IKQKIAKILKPKQSRGRNSQGEAVEGIDTQPSEEASMTXXX 1335
             +  ++E   +GL   G   ++   K    KQSR R  +GE ++    +P E +      
Sbjct: 1198 VEEEKIEDPLTGLESAGADYEETKTKRSVGKQSRKR--KGEHLQPEHLEPPEGSGSKQNT 1255

Query: 1334 XXXXXXXXXXXXXXXXXXRKKNKINSCLEDVGTSSDGEFNNETEERAPWE-FERPSKVRR 1158
                               K +K  SC     TSS+GE +++ E+++  E  E+P + RR
Sbjct: 1256 NKKSSGSIRGGRKTARSVGKASK-KSCSRSFKTSSEGEKDSDIEQQSQIEKLEKPKQARR 1314

Query: 1157 SERPRKAVNYTISNEDILEEC-----CATTSKLDGFETSHNKVI-------GNSLSGKXX 1014
            SER RK VNY+   +D  ++       +TT KL+  E+  +  I        ++++    
Sbjct: 1315 SERHRKIVNYSEGRDDESDKVDKDDGDSTTDKLERRESGADVGIVERCPDDSSNMTENDV 1374

Query: 1013 XXXXXXXXXXXXXXEDFLESGGGFCSEVTEPSQANLGDIGNAVVEDQLSEGYLKMGGGFC 834
                             + +GG       +PS    G++ + V  D LS+ YLKMGGGFC
Sbjct: 1375 SNDYCPQGLSNPETSADVNTGGAEMESAVQPS---FGEMDDPVPGDLLSKEYLKMGGGFC 1431

Query: 833  LEDD 822
            LE+D
Sbjct: 1432 LEED 1435


>XP_016477170.1 PREDICTED: DNA repair protein UVH3-like isoform X1 [Nicotiana
            tabacum]
          Length = 1536

 Score = 1118 bits (2893), Expect = 0.0
 Identities = 701/1531 (45%), Positives = 903/1531 (58%), Gaps = 53/1531 (3%)
 Frame = -1

Query: 5186 MGVHNLWELLAPVGRRVSVETLAGKKLAIDASIWMIQFMKAMRDEKGEMIRNAHLVGFFR 5007
            MGV  LW+LLAPVGRRVSVETLAGKKLAIDASIW+IQFMKAMRDEKGEM+RNAH++GFFR
Sbjct: 1    MGVQGLWDLLAPVGRRVSVETLAGKKLAIDASIWIIQFMKAMRDEKGEMVRNAHILGFFR 60

Query: 5006 RICKLLFLRVKPVFVFDGATPALKRRTVIARRRQRENAQTKIRKTAEKLLLNQLKAMRLK 4827
            RICKLL+LR KPVFVFDG TPALKRRTVIARRRQRENAQ KIRKTAEKLLLN LKAMRLK
Sbjct: 61   RICKLLYLRTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLLNHLKAMRLK 120

Query: 4826 ELQKNLQEQRQQDDSEPKMVSSKIIENAKGKRVVDETIMANHLSEDENISAATCSREALD 4647
            EL  +L+ QR+Q+D++ K VSS+     K +            +E   ++A    +EALD
Sbjct: 121  ELAGDLENQRKQNDAKGKKVSSEATGTVKNE------------AEGNGLAAENYDKEALD 168

Query: 4646 EMLAASIAAEEDGSFSPDASTSGAG-VHYXXXXXXXXEMILPAMHGNVDPAVLASLPPSM 4470
            EMLAASI AEED +F+ DASTS AG            EMILPAM G VDP+VLA+LPPSM
Sbjct: 169  EMLAASIQAEEDWNFADDASTSCAGNPAENDNTDEDEEMILPAMQGKVDPSVLAALPPSM 228

Query: 4469 QLDLLVQMRERLMAENRQRYQKVKKVPSRFSELQIQAYLKTVAFRREIDAVQKSAAGKGL 4290
            QLDLL QMRERLMAENRQ+YQKVKKVP +FSELQIQAYLKTVAFRREID VQKSAAG+G+
Sbjct: 229  QLDLLGQMRERLMAENRQKYQKVKKVPEKFSELQIQAYLKTVAFRREIDEVQKSAAGRGI 288

Query: 4289 GGMQTSRIASEANREFIFSSSFTGDKQVLASGGEVKTDARPTENSRVDVSSKAFNDIVSI 4110
            GG++T RIASEANREFIFSSSFTGDK VLAS GE  T  +P+E    +    +     + 
Sbjct: 289  GGVRTKRIASEANREFIFSSSFTGDKDVLASAGEDHTRKKPSEVQTENSLPNSATASDAA 348

Query: 4109 TRSNQTEECSRDTAGTELPKGVETYVDERGRIRVSRGRAMGIRMTRDLQRNLELMKESEQ 3930
            TR +   E      G+     VETY+DERG +RVSR RAMG+RMTRDLQRNL+++KE E 
Sbjct: 349  TRKSSVLESIVTEPGSAFNDDVETYLDERGHLRVSRLRAMGVRMTRDLQRNLDMIKEIED 408

Query: 3929 VRVPSEEYVNNEXXXXXXXXXXXXXXXXXXXXPKEGNEAMLHTSQSYEDPTLQGVASLEI 3750
                    V++                         N+  + ++   E+  L+   S++I
Sbjct: 409  KDFSDVPTVSD---TAVHSPGNVSDTIPQLNSSNPDNDGKVCSNNKSEESELKSGTSIQI 465

Query: 3749 SFETN-GEQKSGDDEDLFARLVAGETLMNIPADSSPAEKPSDLEDISASDCEWEDGVIDG 3573
            SFE N     + DD+D+FA LVAG+  M    D S ++K S L+  SASD EWE+GVI+ 
Sbjct: 466  SFEDNFAHDCANDDDDIFAHLVAGDPAMEFSIDHSLSKKQS-LD--SASDVEWEEGVIEE 522

Query: 3572 KSAVLNKQTVHELNSYLAHDDMEDDSGVEWEDGCASISKDVSPPPAECSESLSRGALEEE 3393
            K  +L+  +  E  + L  D ++D+  VEWE+ C  I K+ S  P + S   S+GALEEE
Sbjct: 523  KYDLLSNNSQGESQATLEKDGIDDEVEVEWEEECVDICKEPSLFPFD-SRIASKGALEEE 581

Query: 3392 AEYQEAIRRSLVDLKGSGDSNASCENLKS-------------GDAGLIDNLGESSSIINE 3252
            A YQEA+RRSL DL+     + S EN  S             G  G  +N  +S  I+ +
Sbjct: 582  ANYQEAVRRSLEDLRDHRCIDKSHENEMSEEAVQMVTQGIIIGSDGQDNNCPKSYEILQQ 641

Query: 3251 YSIPESSIPVKDNVKSCKSSFETQTNKMIDNQVKLDMPQHS-------NNSETQSTPRLG 3093
              +P S I       +   +   + N  + NQ+      +S         +  Q+   L 
Sbjct: 642  KELP-SEIQTAHLHDTVHETDIAEGNNCLGNQLGEQFQANSGYRNMQIEEATDQADRNLH 700

Query: 3092 VDLVGLELSPGDAPGRCSNSVQDKTNDLRTQEEIIERVKNCNPEKDILIQEQQGDIKSSK 2913
             D+     +P D  G   + ++ K  D  T  E+    K+  P+   + Q +  ++ +++
Sbjct: 701  CDIRMGPTAPLD--GSEVSMIRKKIAD--TTVEVSSNTKSA-PDVTSIEQARFNELPNAR 755

Query: 2912 VXXXXXXXXXXXXXXXTPYTLSGDLHTFTHVDE-----------PHLELEAKVDDR--LH 2772
                              Y      H +TH                     K+DD     
Sbjct: 756  T------------SDAQQYESGAASHHYTHESTELAKAFTEGFISDTNSAQKLDDEGTCD 803

Query: 2771 ESLISESSSFADVENKSDVENKSDFEPKSSPGHNVLHFEKEKYGGNSSFIENMVEQVPXX 2592
            + L+     F ++++    E++           +VL  E+EK G     +E         
Sbjct: 804  DPLLEGKDLFGNLDSAGSKEDQKVMMTSLEEEMHVLDKEREKLGDEQRKLE--------- 854

Query: 2591 XXXXXXXXXXXXXXXXXLGNEQRRLERNAESVSGEMFAECQELLQMFGLPYIIAPMEAEA 2412
                                      RNAESVS EMFAECQELLQMFGLPYIIAPMEAEA
Sbjct: 855  --------------------------RNAESVSSEMFAECQELLQMFGLPYIIAPMEAEA 888

Query: 2411 QCAFMELANLVDGVVTDDSDAFLFGARSVYKNIFDDRKYVETYFMKDIESELGLDRDKLI 2232
            QCA+MEL NLVDGVVTDDSDAFLFGAR+VYKNIFDDRKYVETYFMKD+E+ELGLDR+K+I
Sbjct: 889  QCAYMELTNLVDGVVTDDSDAFLFGARNVYKNIFDDRKYVETYFMKDVENELGLDREKII 948

Query: 2231 RMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLRQFRKWIESPDPSILGKFDVQEGCG 2052
            RMAL LGSDYTEG+SGIGIVNAIEV+NAFPEEDGL++FR+W+ESPDPSILG  D Q    
Sbjct: 949  RMALFLGSDYTEGVSGIGIVNAIEVLNAFPEEDGLQKFREWVESPDPSILGGLDAQASSS 1008

Query: 2051 SRKRGSKIRENEKNKHGGKLEGSSDCDLNMXXXXXXXXXXKQIFMEKHRNVSKNWHIPST 1872
            +RKRGS++ + + +     +EG+S  D N+          KQIFM KHRN+SKNWHIPS+
Sbjct: 1009 TRKRGSEVGDPDMSCSSSNVEGNSASDENV-KSEDRVQKLKQIFMNKHRNISKNWHIPSS 1067

Query: 1871 FPSDVVIAAYASPQVDNSTDSFSWGRPDLVTLHKVCWEKFGWGSKKADEVLLPVLKEYDK 1692
            FPSD VI+AYASP+VD ST+ F+WG+PD+  L KVCWEKFGW S+KADE+L+PVLKEY+K
Sbjct: 1068 FPSDAVISAYASPRVDKSTEPFAWGKPDVSVLRKVCWEKFGWSSQKADELLVPVLKEYNK 1127

Query: 1691 HETQLRLEAFYTFNEKFAKIRSKRIKSALKGVRGNKSEDVMNDSGEGDSKNRKRRKANYV 1512
            HETQLRLEAFYTFNE+FAKIRSKRIK A+K + GN S ++M+ S +      K+R+  + 
Sbjct: 1128 HETQLRLEAFYTFNERFAKIRSKRIKKAVKHMTGNNSMNLMDASVQDAPGTFKKRELKFN 1187

Query: 1511 EAKTNEVEKD-SGLRDHGV-IKQKIAKILKPKQSRGRNSQGEAVEGIDTQPSEEASMTXX 1338
              +  ++E    GL   G   ++   K    KQSR R  +GE ++    +P E +     
Sbjct: 1188 NVEEEKIEDPLMGLESAGADYEETKTKRSVGKQSRKR--KGEHLQPEHLEPPEGSGSKQN 1245

Query: 1337 XXXXXXXXXXXXXXXXXXXRKKNKINSCLEDVGTSSDGEFNNETEERAPWE-FERPSKVR 1161
                                K +K  SC     TSS+GE +N+ E+++  E  E+P + R
Sbjct: 1246 TNKKSSGGIGGGRKTARSAGKASK-KSCSRSFKTSSEGEKDNDIEQQSQIEKLEKPKQAR 1304

Query: 1160 RSERPRKAVNYTISNEDILEEC-----CATTSKLDGFETSHNKVI-------GNSLSGKX 1017
            RSER RK VNY+   +D  ++       + T KL+  E+  +  I        ++++   
Sbjct: 1305 RSERHRKIVNYSEGRDDDSDKVDKDDGDSITDKLERRESGADVGIAERCPDDSSNMTEND 1364

Query: 1016 XXXXXXXXXXXXXXXEDFLESGGGFCSEVTEPSQANLGDIGNAVVEDQLSEGYLKMGGGF 837
                              +++GG       +PS    G++ + V  + LS  YLKMGGGF
Sbjct: 1365 VSNDYCPEGLSNPETSADVDTGGAEMESAVQPS---FGEMDDPVPGNLLSNEYLKMGGGF 1421

Query: 836  CLEDDAARGNTD---EYPGKAAESSQVNSRS 753
            C E+D      +     P  + E S +N+ S
Sbjct: 1422 CSEEDDGAMEHEINASSPILSVECSDINNSS 1452


>XP_019261038.1 PREDICTED: DNA repair protein UVH3 [Nicotiana attenuata] OIT38752.1
            dna repair protein uvh3 [Nicotiana attenuata]
          Length = 1529

 Score = 1117 bits (2888), Expect = 0.0
 Identities = 690/1531 (45%), Positives = 893/1531 (58%), Gaps = 53/1531 (3%)
 Frame = -1

Query: 5186 MGVHNLWELLAPVGRRVSVETLAGKKLAIDASIWMIQFMKAMRDEKGEMIRNAHLVGFFR 5007
            MGV  LWELLAPVGRRVSVETLAGKKLAIDASIW+IQFMKAMRDEKGEM+RNAH++GFFR
Sbjct: 1    MGVQGLWELLAPVGRRVSVETLAGKKLAIDASIWIIQFMKAMRDEKGEMVRNAHILGFFR 60

Query: 5006 RICKLLFLRVKPVFVFDGATPALKRRTVIARRRQRENAQTKIRKTAEKLLLNQLKAMRLK 4827
            RICKLL+LR KPVFVFDG TPALKRRTVIARRRQRENAQ KIRKTAEKLLLN LKAMRLK
Sbjct: 61   RICKLLYLRTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLLNHLKAMRLK 120

Query: 4826 ELQKNLQEQRQQDDSEPKMVSSKIIENAKGKRVVDE-TIMANHLSEDENISAATCSREAL 4650
            EL  +L+ QR+Q+D             AKGK+V  E T    +++E   ++     +EAL
Sbjct: 121  ELAVDLENQRKQND-------------AKGKKVSTEATGTLKNMAEGNGLAEENYDKEAL 167

Query: 4649 DEMLAASIAAEEDGSFSPDASTSGAG-VHYXXXXXXXXEMILPAMHGNVDPAVLASLPPS 4473
            DEMLAASI AEED +F+ DASTS AG            EMILPAM G VDP+VLA+LPPS
Sbjct: 168  DEMLAASIQAEEDWNFAGDASTSCAGDPAENDNTDEDEEMILPAMQGKVDPSVLAALPPS 227

Query: 4472 MQLDLLVQMRERLMAENRQRYQKVKKVPSRFSELQIQAYLKTVAFRREIDAVQKSAAGKG 4293
            MQLDLL QMRERLMAENRQ+YQKVKK P +FSELQIQAYLKTVAFRREID VQKSAAG+G
Sbjct: 228  MQLDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQAYLKTVAFRREIDEVQKSAAGRG 287

Query: 4292 LGGMQTSRIASEANREFIFSSSFTGDKQVLASGGEVKTDARPTENSRVDVSSKAFNDIVS 4113
            +GG++T RIASEANREFIFSSSFTGDK VLAS GE +T  +P+E    +    +     +
Sbjct: 288  IGGVRTKRIASEANREFIFSSSFTGDKDVLASAGEDQTRKKPSEVQTENSLPHSATASDA 347

Query: 4112 ITRSNQTEECSRDTAGTELPKGVETYVDERGRIRVSRGRAMGIRMTRDLQRNLELMKESE 3933
             TR +   E      G+     VETY+DERG +RVSR RAMG+RMTRDLQRNL+++KE E
Sbjct: 348  ATRKSSVLESIVTEPGSAFNDDVETYLDERGHLRVSRLRAMGVRMTRDLQRNLDMIKEIE 407

Query: 3932 QVRVPSEEYVNNEXXXXXXXXXXXXXXXXXXXXPKEG---NEAMLHTSQSYEDPTLQGVA 3762
            +  +   +  ++                            N+    ++   E+  L+   
Sbjct: 408  EESLSRNKDFSDVPTVSETAVHSPGNVSDTVPQLNSSNPDNDGKAFSNNKSEESELKSRT 467

Query: 3761 SLEISFETN-GEQKSGDDEDLFARLVAGETLMNIPADSSPAEKPSDLEDISASDCEWEDG 3585
            S++ISFE N     + DD+D+FA LVAG+  M    D SP++K S L+  SASD EWE+G
Sbjct: 468  SIQISFEDNFAHDCANDDDDIFAHLVAGDPAMEFSIDHSPSKKQS-LD--SASDVEWEEG 524

Query: 3584 VIDGKSAVLNKQTVHELNSYLAHDDMEDDSGVEWEDGCASISKDVSPPPAECSESLSRGA 3405
             I+ K  +L   +  E  + L  D M+D+  VEWE+ C  I K+ S  P + S S S+GA
Sbjct: 525  AIEEKRDLLGNNSQGESQATLEKDGMDDEVEVEWEEECVDICKEPSLFPFD-SRSASKGA 583

Query: 3404 LEEEAEYQEAIRRSLVDLKGSGDSNASCENLKS-------------GDAGLIDNLGESSS 3264
            LEEE  Y+EA+RRSL DL+     + S EN  S             G  G  +N  ++  
Sbjct: 584  LEEEVNYEEAVRRSLEDLRDHRCIDKSHENEMSEVAIQMVTQGIIIGSDGQDNNCTKTHE 643

Query: 3263 IINEYSIPESSIPVKDNVKSCKSSFETQTNKMIDNQVKLDMPQHSNNSETQSTPRLGVDL 3084
            I+ +  +P                 E QT  + D   + D+ + +N S  Q   +   + 
Sbjct: 644  ILQQKELPS----------------EIQTAHLHDTVHETDIAEGNNCSGNQLGGQFQANS 687

Query: 3083 VGLELSPGDAPGRCSNSV-----QDKTNDLRTQEEIIERVKNCNPEKDILIQEQQGDIKS 2919
            V   +   +A  +   ++        T  L   E  + R K  +   ++    +     +
Sbjct: 688  VYRNMQIEEATNQADRNLHCDIRMGPTAPLDGSEVSMIRKKIADTTVEVSSNAKSASDFT 747

Query: 2918 SKVXXXXXXXXXXXXXXXTPYTLSGDLHTFTH-------------VDEPHLELEAKVDDR 2778
            S                   Y      H +TH             + + +   +   +  
Sbjct: 748  SIEQARYNELPNSRTSDAQQYESGAASHHYTHELTELAKAFTEGFISDTNSAQKLDDEGT 807

Query: 2777 LHESLISESSSFADVENKSDVENKSDFEPKSSPGHNVLHFEKEKYGGNSSFIENMVEQVP 2598
                L+     F ++++    E++           +VL  E+EK G     +E   E   
Sbjct: 808  CDGPLLEGKDLFGNLDSAGSKEDQKVMMTSLEEEMHVLDKEREKLGDEQRKLERNAE--- 864

Query: 2597 XXXXXXXXXXXXXXXXXXXLGNEQRRLERNAESVSGEMFAECQELLQMFGLPYIIAPMEA 2418
                                            SVS EMFAECQELLQMFGLPYIIAPMEA
Sbjct: 865  --------------------------------SVSSEMFAECQELLQMFGLPYIIAPMEA 892

Query: 2417 EAQCAFMELANLVDGVVTDDSDAFLFGARSVYKNIFDDRKYVETYFMKDIESELGLDRDK 2238
            EAQCA+MEL NLVDGVVTDDSDAFLFGAR+VYKNIFDDRKYVETYFMKD+E+ELGLDR+K
Sbjct: 893  EAQCAYMELTNLVDGVVTDDSDAFLFGARNVYKNIFDDRKYVETYFMKDVENELGLDREK 952

Query: 2237 LIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLRQFRKWIESPDPSILGKFDVQEG 2058
            LIRM L LGSDYTEG+SGIGIVNAIEV+NAFPEEDGL++FR+W+ESPDPSILG  D Q G
Sbjct: 953  LIRMTLFLGSDYTEGVSGIGIVNAIEVLNAFPEEDGLQKFREWVESPDPSILGGLDAQAG 1012

Query: 2057 CGSRKRGSKIRENEKNKHGGKLEGSSDCDLNMXXXXXXXXXXKQIFMEKHRNVSKNWHIP 1878
              +RKRG ++ + + +     +EG+S  D N+          KQIFM KHRN+SKNWHIP
Sbjct: 1013 SSTRKRGGEVGDPDMSCSSSNVEGNSVSDENV-KSEDRVQKLKQIFMNKHRNISKNWHIP 1071

Query: 1877 STFPSDVVIAAYASPQVDNSTDSFSWGRPDLVTLHKVCWEKFGWGSKKADEVLLPVLKEY 1698
            S+FPSD VI+AYASP+VD ST+ F+WG+PD+  L KVCWEKFGW S+KADE+L+PVLKEY
Sbjct: 1072 SSFPSDAVISAYASPRVDKSTEPFAWGKPDVSVLRKVCWEKFGWSSQKADELLVPVLKEY 1131

Query: 1697 DKHETQLRLEAFYTFNEKFAKIRSKRIKSALKGVRGNKSEDVMNDSGEGDSKNRKRRKAN 1518
            +KHETQLRLEAFYTFNE+FAKIRSKRIK A+K + GNK+ ++M+ S +      K+R++ 
Sbjct: 1132 NKHETQLRLEAFYTFNERFAKIRSKRIKKAVKHMTGNKAMNLMDASVQDAPGTLKKRESK 1191

Query: 1517 YVEAKTNEVEKDSGLRDHGVIKQKIAKILKPKQSRGRNSQGEAVEGIDTQPSEEASMTXX 1338
            +  A+  ++E D  +     +KQ             R  +GE ++    +P E +     
Sbjct: 1192 FNNAEEEKIE-DPLMGLESAVKQ------------SRKRKGEHLQPEHLEPPEGSGSKQN 1238

Query: 1337 XXXXXXXXXXXXXXXXXXXRKKNKINSCLEDVGTSSDGEFNNETEERAPWE-FERPSKVR 1161
                                K NK  SC     TSS+GE +++ E+++  E  E+P + R
Sbjct: 1239 TNKKSSGSIGGGRKTARSVGKANK-KSCSRSFKTSSEGEKDSDIEQQSQIEKLEKPKQAR 1297

Query: 1160 RSERPRKAVNYTISNEDILEEC-----CATTSKLDGFETSHNKVI-------GNSLSGKX 1017
            RSER RK VNY+   +D  ++       ++T KL+  E+  +  I        +++S   
Sbjct: 1298 RSERHRKIVNYSEGRDDDSDKVDKDDGDSSTDKLERRESGADVGIAERCPDDSSNMSEND 1357

Query: 1016 XXXXXXXXXXXXXXXEDFLESGGGFCSEVTEPSQANLGDIGNAVVEDQLSEGYLKMGGGF 837
                              +++GG       +PS    G++ + V  D LS+ YLKMGGGF
Sbjct: 1358 VSNNYCPQGPSNPETSADVDTGGAEMESAVQPS---FGEMEDPVPGDLLSKEYLKMGGGF 1414

Query: 836  CLEDDAARGNTD---EYPGKAAESSQVNSRS 753
            CLE+D      +     P ++ E S +N+ S
Sbjct: 1415 CLEEDDGDMEHEINASSPIQSVECSDINNSS 1445


>XP_010271996.1 PREDICTED: DNA repair protein UVH3 isoform X1 [Nelumbo nucifera]
          Length = 1571

 Score = 1085 bits (2807), Expect = 0.0
 Identities = 700/1567 (44%), Positives = 910/1567 (58%), Gaps = 64/1567 (4%)
 Frame = -1

Query: 5186 MGVHNLWELLAPVGRRVSVETLAGKKLAIDASIWMIQFMKAMRDEKGEMIRNAHLVGFFR 5007
            MGV  LWELLAPVGRRVSVETLAGK+LAIDASIWMIQFMKAMRDEKGEM+RNAHL+GFFR
Sbjct: 1    MGVQGLWELLAPVGRRVSVETLAGKRLAIDASIWMIQFMKAMRDEKGEMVRNAHLIGFFR 60

Query: 5006 RICKLLFLRVKPVFVFDGATPALKRRTVIARRRQRENAQTKIRKTAEKLLLNQLKAMRLK 4827
            RICKLLFLR KPVFVFDG TPALKRRTVIARRRQR+ AQ KIRKTAEKLLLN LKAM+LK
Sbjct: 61   RICKLLFLRTKPVFVFDGGTPALKRRTVIARRRQRDIAQAKIRKTAEKLLLNHLKAMKLK 120

Query: 4826 ELQKNLQEQRQQDDSEPKMVSSKIIENAKGKRVVDETIMANHLSEDENIS-----AATCS 4662
            EL +++++Q+Q +DS             KGK VV +     H++  ENI+     A   +
Sbjct: 121  ELAEDIEKQKQNNDS-------------KGKNVVPD-----HINTTENIATNDTLAGGYN 162

Query: 4661 REALDEMLAASIAAEEDGSFSPDASTSGAGVHYXXXXXXXXEMILPAMHGNVDPAVLASL 4482
            +E+LDE+LAASIAAEEDGS + +ASTS  G+          EM+LP MHGNVDPAVLA+L
Sbjct: 163  QESLDELLAASIAAEEDGSLTINASTSIGGIPPEEDDSDDEEMMLPIMHGNVDPAVLAAL 222

Query: 4481 PPSMQLDLLVQMRERLMAENRQRYQKVKKVPSRFSELQIQAYLKTVAFRREIDAVQKSAA 4302
            PPSMQLDLLVQMRERLMAENRQ+YQKVKK P++FSELQIQAYLKTVAFRREID VQKSAA
Sbjct: 223  PPSMQLDLLVQMRERLMAENRQKYQKVKKAPAKFSELQIQAYLKTVAFRREIDEVQKSAA 282

Query: 4301 GKGLGGMQTSRIASEANREFIFSSSFTGDKQVLASGGEVKTDARPTENSRVDVSSKAFND 4122
            G+G+GG+QTSRIASEANREFIFSSSFTG+K++L S G  +T     EN  V   S   N 
Sbjct: 283  GRGIGGVQTSRIASEANREFIFSSSFTGNKEMLTSAGVNQTGGG-LENQTVGNGSSFLNS 341

Query: 4121 IVSITRSNQTEECSRDTAGTE--LPKGVETYVDERGRIRVSRGRAMGIRMTRDLQRNLEL 3948
            +   + ++           +E      VETY+DERG +RVSR RAMGIRMTRDLQRNL+L
Sbjct: 342  VNCSSAAHCNSAMGSAVGDSERGFEDDVETYLDERGCVRVSRLRAMGIRMTRDLQRNLDL 401

Query: 3947 MKESEQVRVPSEEYVNNEXXXXXXXXXXXXXXXXXXXXPKE-------GNEAMLHTSQSY 3789
            MKE EQ ++  + +  ++                              G + +L    ++
Sbjct: 402  MKEIEQEKMREKNFAKSDSIVNEVLRIQENTVKNNQHGEASNVGNNLIGEKGILPQGDNH 461

Query: 3788 ---EDPTLQGVASLEISFETN-GEQKSGD--DEDLFARLVAGETLMNIP--ADSSPAEKP 3633
               E   L    ++ ISFE +  E+ +GD  D+D+FARLV G+++M IP  A +S  ++P
Sbjct: 462  HLHEHSILGNGNTMVISFEDDVREEHAGDANDDDVFARLVVGDSVM-IPYTAITSSEKQP 520

Query: 3632 SDLEDISASDCEWEDGVIDGKSAVLNKQTVHELNSYLAHDDMEDDSGVEWEDGCASISKD 3453
             D++    SDC WE+G +      +NK + HE  S     ++ DDS ++WE  C +  ++
Sbjct: 521  CDVD----SDCSWEEGNVKD----VNKGS-HECFS---ESNINDDSELDWEGVC-NYPEN 567

Query: 3452 VSPPPAECSESLSRGALEEEAEYQEAIRRSLVDLKGSGDSNASCENLKSGDAGLIDNLGE 3273
            VSPPP E  +++S+G LEE AE QEAI+R+L D +    +     N++            
Sbjct: 568  VSPPPTENKKTVSKGCLEEAAEIQEAIKRNLEDFRKEKPTGMHPANIEITTQDTAFEFPA 627

Query: 3272 SSSIINEYSIPESSIPVKDNVKSCKSSFETQTN-KMIDNQVKLDMPQHSNNSETQSTPRL 3096
                + + ++    +P++ N +  +SS+      + ++N V  D+P  ++    Q +  +
Sbjct: 628  QVLDLVKDTVDSLKLPLESNNQQIQSSYGAAGEFEKLNNVVSKDVPPSNDTPMGQLSSSM 687

Query: 3095 GVDLVGLELSPGD----APGRCSNSVQD-KTNDLRTQEEIIERVKNCNPEKDILIQEQQG 2931
             +     + +  D     PG  S S ++ +      ++  I  V    P++  L  +++ 
Sbjct: 688  ALGETNEKETLTDELYLVPGLQSLSQEESEKRRFSLEKSNIGPVSPIEPKEIHLASDKKF 747

Query: 2930 DIKSSKVXXXXXXXXXXXXXXXTPYTLSGDLHTFTHVDEPHLELEAKVDDRL-------- 2775
            D                         + G     +HV     EL    DD L        
Sbjct: 748  D-----------AFDDGGALASVTEAMDGSSRDDSHVSA--TELXVMPDDSLVGAAQHEC 794

Query: 2774 ----------HESLI-SESSSFADVENKSDVENKSDFEPKSSPGHNVLHFEKEKYGGNSS 2628
                      +E++I  E  S   +EN  +++N     P +   ++     +  Y   S 
Sbjct: 795  GPVPCSSHEVNENIIPREEISVEKMENDVEIKN----NPVTDEKYDAFSDGRTPYRDKSV 850

Query: 2627 FIENMVEQVPXXXXXXXXXXXXXXXXXXXLGNEQRRLERNAESVSGEMFAECQELLQMFG 2448
              +NM   +                    LG EQR+LERNAESVSGEMFAECQELLQMFG
Sbjct: 851  IEDNMEVHIEASRAILDDEMQTLSQERMHLGEEQRKLERNAESVSGEMFAECQELLQMFG 910

Query: 2447 LPYIIAPMEAEAQCAFMELANLVDGVVTDDSDAFLFGARSVYKNIFDDRKYVETYFMKDI 2268
            LPYIIAPMEAEAQCA+MELANLVDGVVTDDSD FLFGARSVYKNIFDDRKYVETYFMKDI
Sbjct: 911  LPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDI 970

Query: 2267 ESELGLDRDKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLRQFRKWIESPDPS 2088
            ESELGL R+KLI MALLLGSDYTEGISGIGIVNAIEVV+AFPEEDGL++F++W+ESPDPS
Sbjct: 971  ESELGLTREKLIHMALLLGSDYTEGISGIGIVNAIEVVHAFPEEDGLQKFKEWLESPDPS 1030

Query: 2087 ILGKFDVQEGCGSRKRGSKIRENEKN------KHGGKLEGSSDCDLNMXXXXXXXXXXKQ 1926
            IL KFD      SRK+  K+ +N+ N      + G   +GS     N           KQ
Sbjct: 1031 ILEKFDAHSESSSRKKLLKVNKNDVNYLEGRVQEGPAFDGSVPQGQNDRQSMDNIQNIKQ 1090

Query: 1925 IFMEKHRNVSKNWHIPSTFPSDVVIAAYASPQVDNSTDSFSWGRPDLVTLHKVCWEKFGW 1746
            IFM KHRNVSKNWHIPS+FPS++V++AYASPQVD ST+ FSWG+PDL  L K+CWEKFGW
Sbjct: 1091 IFMNKHRNVSKNWHIPSSFPSEMVVSAYASPQVDKSTEPFSWGKPDLFALRKLCWEKFGW 1150

Query: 1745 GSKKADEVLLPVLKEYDKHETQLRLEAFYTFNEKFAKIRSKRIKSALKGVRGNKSEDVMN 1566
             ++KADE+LLPVLKEY+KHETQLRLEAFYTFNE+FAKIRS+RIK A+KG+ GN++ ++ +
Sbjct: 1151 SNQKADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRSQRIKRAVKGITGNRTSELDD 1210

Query: 1565 DSGEGDS-KNRKRRKANYVEAKTNEVEKDSGLRDHGVIKQKIAKILKPKQSRGRNSQGEA 1389
               E    KNR R     V     E   +  L  +G    ++    K  + RG  S+   
Sbjct: 1211 LLCEASKVKNRSR-----VNPLPEEKRSNISLNGNGDSSAELPS--KWPRRRGTESKSAP 1263

Query: 1388 VEGIDTQP---SEEASMTXXXXXXXXXXXXXXXXXXXXXRKKNKINSCLEDVGTSSDGEF 1218
             E  ++ P    +    T                      K+   +  +E   T SD  +
Sbjct: 1264 SEVTNSAPPFQMDSKKSTKKRLKRDTGGRQKGKGAGRGRGKQAPNHDAIETSSTDSDNSW 1323

Query: 1217 NNETEERAPWEFERPSKVRRSERPRKAVNYTISNEDILEECCATTSKLDGFETSHNKVIG 1038
              + +E    + E    VRRS R +K V Y + + +I  +    +S+    E +  + + 
Sbjct: 1324 --DEQEMQVEKTEGLPAVRRSTRLKKQVEYAVKDLEI--DGLGESSERTREEFTTEETVE 1379

Query: 1037 NSLSGKXXXXXXXXXXXXXXXXEDFLESGGGFCSEVTEPSQANLGDIGNAVVEDQLSEGY 858
               S +                       G     V E +Q    D  N  ++D     Y
Sbjct: 1380 QETSAEENMF-------------------GDIAHGVEERNQC---DQSNPSLKDGSCRDY 1417

Query: 857  LKMGGGFCLE-------DDAARGNTDEYPGKAAESSQVNSRSDGDPLAEDHISEEYLKIG 699
            L+MGGGFC++       D+A   N     G +   S   S  DGD    D    +YLK+G
Sbjct: 1418 LEMGGGFCMDKTEGFLMDEAGTENRSTQFGSSLNRS---SNPDGDFSPIDGTCGDYLKMG 1474

Query: 698  GGFCLDD 678
            GGFC+D+
Sbjct: 1475 GGFCIDE 1481


>KVI09079.1 5'-3' exonuclease, C-terminal domain-containing protein [Cynara
            cardunculus var. scolymus]
          Length = 1490

 Score = 1051 bits (2717), Expect = 0.0
 Identities = 689/1525 (45%), Positives = 890/1525 (58%), Gaps = 70/1525 (4%)
 Frame = -1

Query: 5186 MGVHNLWELLAPVGRRVSVETLAGKKLAIDASIWMIQFMKAMRDEKGEMIRNAHLVGFFR 5007
            MGVH LW+LL+PVGRRVSVETLAGK+LAIDASIWMIQFMKAMRDE+G+M+RNAH++GFFR
Sbjct: 1    MGVHGLWDLLSPVGRRVSVETLAGKRLAIDASIWMIQFMKAMRDERGDMVRNAHILGFFR 60

Query: 5006 RICKLLFLRVKPVFVFDGATPALKRRTVIARRRQRENAQTKIRKTAEKLLLNQLKAMRLK 4827
            RICKLLFLR KPVFVFDG TPALKRRTVIARRRQRENAQ KIRKTAEKLLL+ LKA RLK
Sbjct: 61   RICKLLFLRTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLLSHLKATRLK 120

Query: 4826 ELQKNLQEQRQQDDSEPKMVSSKIIENAKGKRVV-DETIMANHLSEDENISAATCSREAL 4650
            EL  +L+ QR+ +               KGK+V+ D   ++       +       +E L
Sbjct: 121  ELANDLENQRKNNGD-------------KGKKVITDHADLSGTALNTNSSDTKAFDQEVL 167

Query: 4649 DEMLAASIAAEEDGSFSPDASTSGAG-VHYXXXXXXXXEMILPAMHGNVDPAVLASLPPS 4473
            D MLAASI AEE   F  DASTSGAG +          EMILPA+ G VDPAVLA+LPPS
Sbjct: 168  DAMLAASIEAEEGEGFIGDASTSGAGFLAEDEDGDDDEEMILPALQGKVDPAVLAALPPS 227

Query: 4472 MQLDLLVQMRERLMAENRQRYQKVKKVPSRFSELQIQAYLKTVAFRREIDAVQKSAAGKG 4293
            MQLDLLVQMRERLMAENRQ+YQKVKK P+RFSELQI+AYLKTVAFRREID VQK+A G+G
Sbjct: 228  MQLDLLVQMRERLMAENRQKYQKVKKAPARFSELQIEAYLKTVAFRREIDEVQKAAGGRG 287

Query: 4292 LGGMQTSRIASEANREFIFSSSFTGDKQVLASGGEVKTDARPTENSRVDVSSKAFNDIVS 4113
            +GG++TSRIASEANREFIFSSSFTG++Q LAS G       P++ +    S+ + ND+VS
Sbjct: 288  IGGVKTSRIASEANREFIFSSSFTGNRQSLASSGVEGNSNVPSQIATRHPSTGSVNDVVS 347

Query: 4112 ITRSNQTEECSRDTAGTELPKGVETYVDERGRIRVSRGRAMGIRMTRDLQRNLELMKESE 3933
              +SN T E   +       + VETY DERG IRVS+ RAMGIRMTRDLQRNL+LMKE E
Sbjct: 348  TNKSNSTIESIMNKPRKAFNEDVETYRDERGSIRVSKVRAMGIRMTRDLQRNLDLMKEIE 407

Query: 3932 QVRVPSEEYVNNEXXXXXXXXXXXXXXXXXXXXPKEGNEAMLHTSQSYEDPTLQGVASLE 3753
            Q R+      N+                         ++  + ++++ +D       S+E
Sbjct: 408  QDRIDPCIKSNDRISHCKETAFPSTVPESSKLPGTSLHDRSVCSNETNQDSIPVSGTSIE 467

Query: 3752 ISFETNGEQKSGD-DEDLFARLVAGETLMNIPAD-SSPAEKPSDLEDISASDCEWEDGVI 3579
            +SFE + EQ+  D D+D+FA +VAG+ L+   AD +S A++P+    ++ SDCEWE+G++
Sbjct: 468  VSFEDDNEQQFVDSDDDVFACIVAGDPLVVTSADNTSSAKQPA----MTLSDCEWEEGML 523

Query: 3578 -DGKSAVLNKQTVHELNSYLAHDDMEDDSGVEWEDGCASISKDVSPPPAECSESLSRGAL 3402
             D K   L           LA     D+S VEWE+G +   +  +    EC E++S+G L
Sbjct: 524  GDTKGKRL-----------LAGHSTSDESEVEWEEGPSDKPESGAACEIECRETVSKGDL 572

Query: 3401 EEEAEYQEAIRRSLVDLKGSGDSNASCENLKSGDAGLIDNLGESSSIINEY--------S 3246
             EEA+ QEAIR S+ D++   D +AS    +      +D   E +  ++EY         
Sbjct: 573  LEEADLQEAIRLSMEDMRCQKDIDASSAPEEFKGNKNMDT--ECAVFVSEYVETDRAAPR 630

Query: 3245 IPESSIPVKDNVKSCKSSFETQTNKMIDNQVKLDMPQHSNNSETQSTPRLGVDLVGLELS 3066
            +P  S+P      +  +  +   + + + ++K      +   E  ++    +  V +E S
Sbjct: 631  LPSESVPPNKLSIATVAGVDDGVDSVDETKIKKANSSPTTQLEVTTSDDPSLMEVRMETS 690

Query: 3065 -PGDAPGRCSNSVQDKTNDLRTQEEIIERVKNCNPEK---DILIQEQQGDIKSSKVXXXX 2898
               D       S+++  +D  +Q E  E V N   E    D++   ++ + +SS      
Sbjct: 691  YQSDLKYHPELSIREACDDRNSQGE-TEHVDNSQGETEHVDVINPTKEDETESS----IE 745

Query: 2897 XXXXXXXXXXXTPYTLSGDLHTFTHVDEPHL-------------ELEAKVDDRLHESLIS 2757
                       TP + +    T  H+ +P +             EL+A V D + E    
Sbjct: 746  LHEDNCGGNSKTPISSNIFSCTTNHISKPDVGMPDAPLADAQQSELKALVSDHIPEITKP 805

Query: 2756 ESSSFADVENKSDVENKSDFEPKSSPGHNVLHFEKEKYGGNSSFIENM-VEQVPXXXXXX 2580
            + ++  + ++  DV  K   E       N   +E+ +   N   + +M  EQV       
Sbjct: 806  KETAVNESKHDFDVALKVTEE-----RDNYASYEQREDDVNKFVLTDMSEEQVEIAKASL 860

Query: 2579 XXXXXXXXXXXXXLGNEQRRLERNAESVSGEMFAECQ----------------------- 2469
                         LG+EQ+RLERNAESVSGEMFAECQ                       
Sbjct: 861  EEEMTNLTKERTDLGDEQKRLERNAESVSGEMFAECQVRTTACLASLEAHNEIGGVRCED 920

Query: 2468 ---------------ELLQMFGLPYIIAPMEAEAQCAFMELANLVDGVVTDDSDAFLFGA 2334
                           ELLQMFGLPYIIAPMEAEAQCA+MEL NLVDGV+TDDSD  LFGA
Sbjct: 921  DSLKMHSSGESDKRWELLQMFGLPYIIAPMEAEAQCAYMELENLVDGVITDDSDVLLFGA 980

Query: 2333 RSVYKNIFDDRKYVETYFMKDIESELGLDRDKLIRMALLLGSDYTEGISGIGIVNAIEVV 2154
            RSVYKNIFDDRKYVETYFMKDIE+ELGL RDKLIRMA+LLGSDYTEGISGIGIVNA EV+
Sbjct: 981  RSVYKNIFDDRKYVETYFMKDIETELGLTRDKLIRMAMLLGSDYTEGISGIGIVNATEVL 1040

Query: 2153 NAFPEEDGLRQFRKWIESPDPSILGKFDVQEGCGSRKRGSKIRENEKNKHGGKLEGSSDC 1974
            NAFPEEDGL++FR+WIESPDP+ILGK        +RKRGS     E +     +  S D 
Sbjct: 1041 NAFPEEDGLQKFREWIESPDPTILGK-----ASSTRKRGSNSSAEEASTVNQGVTNSDD- 1094

Query: 1973 DLNMXXXXXXXXXXKQIFMEKHRNVSKNWHIPSTFPSDVVIAAYASPQVDNSTDSFSWGR 1794
            D++           KQIFM+KHRNVSKNWHIPSTFPSD VI+AYASPQVD ST+ FSWG+
Sbjct: 1095 DIH---------RMKQIFMDKHRNVSKNWHIPSTFPSDAVISAYASPQVDKSTEPFSWGK 1145

Query: 1793 PDLVTLHKVCWEKFGWGSKKADEVLLPVLKEYDKHETQLRLEAFYTFNEKFAKIRSKRIK 1614
            PDL  L K+CWEKFGWG++KADE+L PVLKEY+KHETQLRLEAFYTFNE+FAKIRSKRI 
Sbjct: 1146 PDLFVLRKLCWEKFGWGTQKADELLQPVLKEYNKHETQLRLEAFYTFNERFAKIRSKRIS 1205

Query: 1613 SALKGVRGNKSEDVMNDSGEGDSKNRKRRKANYVEAKTNEVEKDSGLRDHGVIKQKIAKI 1434
             A+KG+ G+K+ + M D  E D+ + K RK         EV+ + G  D  V K+++   
Sbjct: 1206 KAVKGIAGSKTSESM-DYDELDASSGKERK---------EVKHEEGNVD--VTKEQLT-- 1251

Query: 1433 LKPKQSRGRNSQGEAVEGIDTQPSEEASMTXXXXXXXXXXXXXXXXXXXXXRKKNKINSC 1254
               ++S     +GE     +T+                             +++ K    
Sbjct: 1252 APTEKSELSTQEGERK---NTKERSSVGGRGRGRGRGRGRGRGRGRGQSVGKRRRKTKYN 1308

Query: 1253 LEDVGTSSDGEFNNETEERAPWEF-ERPSKVRRSERPRKAVNYTISNEDILEECCATTSK 1077
            LE  GTSSD   N++  +    E  E   +VR+S+R RK+V  + +NED         S+
Sbjct: 1309 LELSGTSSDDGNNSDYVQEVHAEHSEGQHEVRKSKRVRKSVISSTNNED---------SE 1359

Query: 1076 LDGFETSHNKVIGNSLSGKXXXXXXXXXXXXXXXXEDFLESGGGFCSEVTEPSQANLGDI 897
            +D       +V GN    +                + F+ SG G  S+     +    + 
Sbjct: 1360 MD----EAREVAGNGEPSR-------EEERLVSHDDKFMLSGSGIRSDKHWCQE----EE 1404

Query: 896  GNAVVEDQLSEGYLKMGGGFCLEDD 822
            G  V+E  LSE YLKMGGGFCL+++
Sbjct: 1405 GGPVIE--LSEEYLKMGGGFCLDEE 1427


>XP_017609403.1 PREDICTED: DNA repair protein UVH3 isoform X4 [Gossypium arboreum]
          Length = 1673

 Score = 1022 bits (2642), Expect = 0.0
 Identities = 673/1647 (40%), Positives = 903/1647 (54%), Gaps = 125/1647 (7%)
 Frame = -1

Query: 5186 MGVHNLWELLAPVGRRVSVETLAGKKLAIDASIWMIQFMKAMRDEKGEMIRNAHLVGFFR 5007
            MGVH LWELLAPVGRRVSVETLAGKKLAIDASIWM+QFMKAMRDEKGEMIRNAHL+GFFR
Sbjct: 1    MGVHGLWELLAPVGRRVSVETLAGKKLAIDASIWMVQFMKAMRDEKGEMIRNAHLLGFFR 60

Query: 5006 RICKLLFLRVKPVFVFDGATPAL--------KRRTVIARRRQRENAQTKIRKTAEKLLL- 4854
            RICKLL+L+ KPVFVFDGATP L        +R+   A+ + R+ A+  +    +++ L 
Sbjct: 61   RICKLLYLKTKPVFVFDGATPILKRRTVIARRRQRENAQAKIRKTAEKLLLNQLKQMRLK 120

Query: 4853 -------NQLKAMR-----------------------------LKELQKNLQE------- 4803
                   NQ K  +                              KE    L+E       
Sbjct: 121  ELAKDLDNQRKMQKNNNKDKGKMVSSDNQSDTNFVGCNANVELTKEGDVKLKEKLEVPSI 180

Query: 4802 -----QRQQDDSEPKMVSSKIIEN----------------------AKGKRVV----DET 4716
                 Q + +D +  ++   I EN                      AKGK+++    +++
Sbjct: 181  AKDGGQNEDEDEDEVIILPDIDENIDPDVLAALPQSMQRQLLKQTDAKGKKILLNDLNQS 240

Query: 4715 IMANHLSEDENISAATCSREALDEMLAASIAAEEDGSFSPDASTSGAGVHYXXXXXXXXE 4536
                  +E + + + + S+E LDEMLAAS+A +ED + + +ASTS A +          E
Sbjct: 241  NKERSSTEHDAMKSTSYSQEKLDEMLAASLATKEDSNLA-NASTSVAAIPSEEDGDEDEE 299

Query: 4535 MILPAMHGNVDPAVLASLPPSMQLDLLVQMRERLMAENRQRYQKVKKVPSRFSELQIQAY 4356
            MILPAMHGNVDPAVLA+LPPS+QLDLL QMRERLMAENRQ+YQKVKK P +FSELQIQ+Y
Sbjct: 300  MILPAMHGNVDPAVLAALPPSLQLDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSY 359

Query: 4355 LKTVAFRREIDAVQKSAAGKGLGGMQTSRIASEANREFIFSSSFTGDKQVLASGGEVKTD 4176
            LKTVAFRREID VQ++AAG+G+ G+QTSRIASEANREFIFSSSFTGDKQ   S  + + +
Sbjct: 360  LKTVAFRREIDEVQRAAAGQGVAGVQTSRIASEANREFIFSSSFTGDKQAFTSARKERDE 419

Query: 4175 ARPTENSRVDVSSKAFNDIVSITRSNQTEECSRDTAGTELPKGVETYVDERGRIRVSRGR 3996
             +  E    D  S     + S  +SN   E   D + +   + V TY+DE GR+RVSR R
Sbjct: 420  DKQQERHS-DHPSGFLGSVKSSCKSNVAAESVPDESTSAPHEDVGTYLDETGRVRVSRVR 478

Query: 3995 AMGIRMTRDLQRNLELMKESEQVRVPSEEYVNNEXXXXXXXXXXXXXXXXXXXXP---KE 3825
             MGIRMTRDLQRNL+LMKE E+ R    + VN +                        ++
Sbjct: 479  GMGIRMTRDLQRNLDLMKEIEKERTNLNKGVNVQSVPDKSKIDASKSVSNGNQFVETSRD 538

Query: 3824 GNEAMLHTSQSYEDPTLQGVASLEISFETNGEQKS-GDDEDLFARLVAGETL-MNIPADS 3651
             N   ++ ++S      +  + +EI+FE +G+ +   DD+D+FA L AG+ + +  P + 
Sbjct: 539  DNGESVNVNESNRKSAFETESCMEITFEDDGKTEYFDDDDDIFACLAAGDPVTLPSPKEK 598

Query: 3650 SPAEKPSDLEDISASDCEWEDGVIDGKSAVLNKQTVHELNSYLAHDDMEDDSGVEWEDGC 3471
            S  ++ S     S SD EWE+GV++GK   +      E N      ++ DDS VEWE+  
Sbjct: 599  SLRKQASG----SDSDFEWEEGVVEGKWDDVTPGMNAEHNLLNKESNINDDSEVEWEEEP 654

Query: 3470 ASISKDVSPPPAECSESLSRGALEEEAEYQEAIRRSLVDLKGSGDSNASCENLKSGDAGL 3291
            +   K  S  P E    LS+G  EEE++ QEAIRRSL D+     ++   + ++S + G 
Sbjct: 655  SDAPKS-SSGPVESGRMLSKGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESKNLG- 712

Query: 3290 IDNLGESSSIINEYSIPESSIPVKDNVKSCKSSFETQTNKMIDNQVKLDMPQHSNNSETQ 3111
             +NL E    ++E     +S    D V     S E              +   + NS  +
Sbjct: 713  -ENLDEDFESLHEKGDTGASSFPGDAVNWQNKSCENLDRPQKPCTGNEPIISETFNSPER 771

Query: 3110 STPRLGVDLVGLELSPGDAPGRCSNSVQDKTNDLRTQEEIIERVKNCNPEKDILIQEQQG 2931
             +P    D     LS        S+S Q + N+       +E+  +    K + + E+  
Sbjct: 772  PSPVHNSDKNMTILSKFSERSDGSHSEQSRHNETAEFVATLEKEVDFPTGKHLDVSEEVD 831

Query: 2930 DIKSSKVXXXXXXXXXXXXXXXTPYTLSGDLHTFTHVDEPHLELEA-----KVDDRLHES 2766
             + +                         +     +V+   +E E      K+D     S
Sbjct: 832  GLSTISDSWFKVNSHSFDAAHDKKTVSENEPSNLVNVNTSSVEAEILDQDKKIDFEAKPS 891

Query: 2765 LISESSSFADVENKSDVENKSDFEPKSSPGHNVLHFEKEKYGG---------------NS 2631
              S  +    +       NK  F+         LH E+E  G                 S
Sbjct: 892  QQSVDTVDLSIPTVQSSANKVIFD---------LHIEQELSGDITYENCVNKAEQHTDMS 942

Query: 2630 SFIENMVEQVPXXXXXXXXXXXXXXXXXXXLGNEQRRLERNAESVSGEMFAECQELLQMF 2451
            +   N  E++                    + +EQR+LERNAESVS EMFAECQELLQMF
Sbjct: 943  TIKGNDNEEIQFSKASLDEELLILDQECINMVDEQRKLERNAESVSSEMFAECQELLQMF 1002

Query: 2450 GLPYIIAPMEAEAQCAFMELANLVDGVVTDDSDAFLFGARSVYKNIFDDRKYVETYFMKD 2271
            GLPYIIAPMEAEAQCA+MEL NLVDGVVTDDSD FLFGARSVYKNIFDDRKYVETYFM+D
Sbjct: 1003 GLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQD 1062

Query: 2270 IESELGLDRDKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLRQFRKWIESPDP 2091
            IE ELGL R+KL+RMALLLGSDYTEG+SGIGIVNAIEVVNAFPEEDGL +F++WIESPDP
Sbjct: 1063 IEKELGLTREKLMRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLHKFQEWIESPDP 1122

Query: 2090 SILGKFDVQEGCGSRKRGSKIRENE----KNKHGG--KLEGSSDCDLNM------XXXXX 1947
            +ILGK +VQEG  + KRG K  E +    K   GG     G+S  D N            
Sbjct: 1123 TILGKLNVQEGSSAWKRGPKSTEKDVNSTKTSTGGSESNNGASSLDQNSFQADKNMQSTD 1182

Query: 1946 XXXXXKQIFMEKHRNVSKNWHIPSTFPSDVVIAAYASPQVDNSTDSFSWGRPDLVTLHKV 1767
                 KQIFM+KHRNVSKNWHIPS+FPS+ VI+AY+ PQVD ST+ F+WGRPDL  L K+
Sbjct: 1183 CINDIKQIFMDKHRNVSKNWHIPSSFPSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKL 1242

Query: 1766 CWEKFGWGSKKADEVLLPVLKEYDKHETQLRLEAFYTFNEKFAKIRSKRIKSALKGVRGN 1587
            CWEKFGWGS+K+DE+LLPVL+EY+K ETQLR+EAFYTFNE+FAKIRSKRIK A+KG+ GN
Sbjct: 1243 CWEKFGWGSQKSDELLLPVLREYEKRETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGN 1302

Query: 1586 KSEDVMNDSGEGDSKNRKRRKANYVEAKTNEVEKDSGLRDH--GVIKQKIAKILKPKQSR 1413
            +S ++++D  +  SK+R +R+ + V++  ++  + S  ++      + K      PK SR
Sbjct: 1303 QSSELIDDGMQQASKSRNKRRVSPVQSGDDKSGEPSNKKEDIASQCQSKSTDKSVPKTSR 1362

Query: 1412 GRNSQGEAVEGIDTQPSEEASMTXXXXXXXXXXXXXXXXXXXXXRKKNKINSCLEDVGTS 1233
             R + G+ V   + +  E    T                      ++ K +S  +   TS
Sbjct: 1363 KRQNSGKDV-SFEMRTPEPQLRTLRRRKTNKQSAGNGRGRGGGEGRRRKGSSGFQQFETS 1421

Query: 1232 SD-GEFNNETEERAPWEFERPSKVRRSERPRKAVNYTISNEDILEECCATTSKLDGFETS 1056
            S  G+  N+ +E    + ++P +VRRS R R  VNYT++  D+ +E   +  +  G +  
Sbjct: 1422 SSGGDSGNDNQEVDGEKLDQPREVRRSMRTRNPVNYTVN--DLEDEGGLSHKESSGEDAM 1479

Query: 1055 HNKVIGNSLSGKXXXXXXXXXXXXXXXXEDFLESGGGFCSEV--TEPSQANLGDIGNAVV 882
              + + +    K                 D+LE+GGGFC +   T+   AN     +  +
Sbjct: 1480 EKEAVEDV---KEKIQCEAREPSLDNIDGDYLETGGGFCMDERGTDLPDAN----QDFDL 1532

Query: 881  EDQLSEGYLKMGGGFCLEDDAARGNTDEYPGKAAESSQVNSRSDGDPLAEDHISEEYLKI 702
            E + +  YLKMGGGFC+E D  + +T +               D +P +E   + +YLK+
Sbjct: 1533 ETEPTNDYLKMGGGFCMEGDIDQSDTSQ---------------DINPFSETGSANDYLKM 1577

Query: 701  GGGFCLDDDEAADGNRDNRPSVTKPNS 621
            GGGFC+++ E  D      PSV    S
Sbjct: 1578 GGGFCMEESETIDNPDAAEPSVNAEGS 1604


>XP_017609399.1 PREDICTED: DNA repair protein UVH3 isoform X3 [Gossypium arboreum]
          Length = 1697

 Score = 1018 bits (2633), Expect = 0.0
 Identities = 669/1633 (40%), Positives = 899/1633 (55%), Gaps = 125/1633 (7%)
 Frame = -1

Query: 5186 MGVHNLWELLAPVGRRVSVETLAGKKLAIDASIWMIQFMKAMRDEKGEMIRNAHLVGFFR 5007
            MGVH LWELLAPVGRRVSVETLAGKKLAIDASIWM+QFMKAMRDEKGEMIRNAHL+GFFR
Sbjct: 1    MGVHGLWELLAPVGRRVSVETLAGKKLAIDASIWMVQFMKAMRDEKGEMIRNAHLLGFFR 60

Query: 5006 RICKLLFLRVKPVFVFDGATPAL--------KRRTVIARRRQRENAQTKIRKTAEKLLL- 4854
            RICKLL+L+ KPVFVFDGATP L        +R+   A+ + R+ A+  +    +++ L 
Sbjct: 61   RICKLLYLKTKPVFVFDGATPILKRRTVIARRRQRENAQAKIRKTAEKLLLNQLKQMRLK 120

Query: 4853 -------NQLKAMR-----------------------------LKELQKNLQE------- 4803
                   NQ K  +                              KE    L+E       
Sbjct: 121  ELAKDLDNQRKMQKNNNKDKGKMVSSDNQSDTNFVGCNANVELTKEGDVKLKEKLEVPSI 180

Query: 4802 -----QRQQDDSEPKMVSSKIIEN----------------------AKGKRVV----DET 4716
                 Q + +D +  ++   I EN                      AKGK+++    +++
Sbjct: 181  AKDGGQNEDEDEDEVIILPDIDENIDPDVLAALPQSMQRQLLKQTDAKGKKILLNDLNQS 240

Query: 4715 IMANHLSEDENISAATCSREALDEMLAASIAAEEDGSFSPDASTSGAGVHYXXXXXXXXE 4536
                  +E + + + + S+E LDEMLAAS+A +ED + + +ASTS A +          E
Sbjct: 241  NKERSSTEHDAMKSTSYSQEKLDEMLAASLATKEDSNLA-NASTSVAAIPSEEDGDEDEE 299

Query: 4535 MILPAMHGNVDPAVLASLPPSMQLDLLVQMRERLMAENRQRYQKVKKVPSRFSELQIQAY 4356
            MILPAMHGNVDPAVLA+LPPS+QLDLL QMRERLMAENRQ+YQKVKK P +FSELQIQ+Y
Sbjct: 300  MILPAMHGNVDPAVLAALPPSLQLDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSY 359

Query: 4355 LKTVAFRREIDAVQKSAAGKGLGGMQTSRIASEANREFIFSSSFTGDKQVLASGGEVKTD 4176
            LKTVAFRREID VQ++AAG+G+ G+QTSRIASEANREFIFSSSFTGDKQ   S  + + +
Sbjct: 360  LKTVAFRREIDEVQRAAAGQGVAGVQTSRIASEANREFIFSSSFTGDKQAFTSARKERDE 419

Query: 4175 ARPTENSRVDVSSKAFNDIVSITRSNQTEECSRDTAGTELPKGVETYVDERGRIRVSRGR 3996
             +  E    D  S     + S  +SN   E   D + +   + V TY+DE GR+RVSR R
Sbjct: 420  DKQQERHS-DHPSGFLGSVKSSCKSNVAAESVPDESTSAPHEDVGTYLDETGRVRVSRVR 478

Query: 3995 AMGIRMTRDLQRNLELMKESEQVRVPSEEYVNNEXXXXXXXXXXXXXXXXXXXXP---KE 3825
             MGIRMTRDLQRNL+LMKE E+ R    + VN +                        ++
Sbjct: 479  GMGIRMTRDLQRNLDLMKEIEKERTNLNKGVNVQSVPDKSKIDASKSVSNGNQFVETSRD 538

Query: 3824 GNEAMLHTSQSYEDPTLQGVASLEISFETNGEQKS-GDDEDLFARLVAGETL-MNIPADS 3651
             N   ++ ++S      +  + +EI+FE +G+ +   DD+D+FA L AG+ + +  P + 
Sbjct: 539  DNGESVNVNESNRKSAFETESCMEITFEDDGKTEYFDDDDDIFACLAAGDPVTLPSPKEK 598

Query: 3650 SPAEKPSDLEDISASDCEWEDGVIDGKSAVLNKQTVHELNSYLAHDDMEDDSGVEWEDGC 3471
            S  ++ S     S SD EWE+GV++GK   +      E N      ++ DDS VEWE+  
Sbjct: 599  SLRKQASG----SDSDFEWEEGVVEGKWDDVTPGMNAEHNLLNKESNINDDSEVEWEEEP 654

Query: 3470 ASISKDVSPPPAECSESLSRGALEEEAEYQEAIRRSLVDLKGSGDSNASCENLKSGDAGL 3291
            +   K  S  P E    LS+G  EEE++ QEAIRRSL D+     ++   + ++S + G 
Sbjct: 655  SDAPKS-SSGPVESGRMLSKGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESKNLG- 712

Query: 3290 IDNLGESSSIINEYSIPESSIPVKDNVKSCKSSFETQTNKMIDNQVKLDMPQHSNNSETQ 3111
             +NL E    ++E     +S    D V     S E              +   + NS  +
Sbjct: 713  -ENLDEDFESLHEKGDTGASSFPGDAVNWQNKSCENLDRPQKPCTGNEPIISETFNSPER 771

Query: 3110 STPRLGVDLVGLELSPGDAPGRCSNSVQDKTNDLRTQEEIIERVKNCNPEKDILIQEQQG 2931
             +P    D     LS        S+S Q + N+       +E+  +    K + + E+  
Sbjct: 772  PSPVHNSDKNMTILSKFSERSDGSHSEQSRHNETAEFVATLEKEVDFPTGKHLDVSEEVD 831

Query: 2930 DIKSSKVXXXXXXXXXXXXXXXTPYTLSGDLHTFTHVDEPHLELEA-----KVDDRLHES 2766
             + +                         +     +V+   +E E      K+D     S
Sbjct: 832  GLSTISDSWFKVNSHSFDAAHDKKTVSENEPSNLVNVNTSSVEAEILDQDKKIDFEAKPS 891

Query: 2765 LISESSSFADVENKSDVENKSDFEPKSSPGHNVLHFEKEKYGG---------------NS 2631
              S  +    +       NK  F+         LH E+E  G                 S
Sbjct: 892  QQSVDTVDLSIPTVQSSANKVIFD---------LHIEQELSGDITYENCVNKAEQHTDMS 942

Query: 2630 SFIENMVEQVPXXXXXXXXXXXXXXXXXXXLGNEQRRLERNAESVSGEMFAECQELLQMF 2451
            +   N  E++                    + +EQR+LERNAESVS EMFAECQELLQMF
Sbjct: 943  TIKGNDNEEIQFSKASLDEELLILDQECINMVDEQRKLERNAESVSSEMFAECQELLQMF 1002

Query: 2450 GLPYIIAPMEAEAQCAFMELANLVDGVVTDDSDAFLFGARSVYKNIFDDRKYVETYFMKD 2271
            GLPYIIAPMEAEAQCA+MEL NLVDGVVTDDSD FLFGARSVYKNIFDDRKYVETYFM+D
Sbjct: 1003 GLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQD 1062

Query: 2270 IESELGLDRDKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLRQFRKWIESPDP 2091
            IE ELGL R+KL+RMALLLGSDYTEG+SGIGIVNAIEVVNAFPEEDGL +F++WIESPDP
Sbjct: 1063 IEKELGLTREKLMRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLHKFQEWIESPDP 1122

Query: 2090 SILGKFDVQEGCGSRKRGSKIRENE----KNKHGG--KLEGSSDCDLNM------XXXXX 1947
            +ILGK +VQEG  + KRG K  E +    K   GG     G+S  D N            
Sbjct: 1123 TILGKLNVQEGSSAWKRGPKSTEKDVNSTKTSTGGSESNNGASSLDQNSFQADKNMQSTD 1182

Query: 1946 XXXXXKQIFMEKHRNVSKNWHIPSTFPSDVVIAAYASPQVDNSTDSFSWGRPDLVTLHKV 1767
                 KQIFM+KHRNVSKNWHIPS+FPS+ VI+AY+ PQVD ST+ F+WGRPDL  L K+
Sbjct: 1183 CINDIKQIFMDKHRNVSKNWHIPSSFPSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKL 1242

Query: 1766 CWEKFGWGSKKADEVLLPVLKEYDKHETQLRLEAFYTFNEKFAKIRSKRIKSALKGVRGN 1587
            CWEKFGWGS+K+DE+LLPVL+EY+K ETQLR+EAFYTFNE+FAKIRSKRIK A+KG+ GN
Sbjct: 1243 CWEKFGWGSQKSDELLLPVLREYEKRETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGN 1302

Query: 1586 KSEDVMNDSGEGDSKNRKRRKANYVEAKTNEVEKDSGLRDH--GVIKQKIAKILKPKQSR 1413
            +S ++++D  +  SK+R +R+ + V++  ++  + S  ++      + K      PK SR
Sbjct: 1303 QSSELIDDGMQQASKSRNKRRVSPVQSGDDKSGEPSNKKEDIASQCQSKSTDKSVPKTSR 1362

Query: 1412 GRNSQGEAVEGIDTQPSEEASMTXXXXXXXXXXXXXXXXXXXXXRKKNKINSCLEDVGTS 1233
             R + G+ V   + +  E    T                      ++ K +S  +   TS
Sbjct: 1363 KRQNSGKDV-SFEMRTPEPQLRTLRRRKTNKQSAGNGRGRGGGEGRRRKGSSGFQQFETS 1421

Query: 1232 SD-GEFNNETEERAPWEFERPSKVRRSERPRKAVNYTISNEDILEECCATTSKLDGFETS 1056
            S  G+  N+ +E    + ++P +VRRS R R  VNYT++  D+ +E   +  +  G +  
Sbjct: 1422 SSGGDSGNDNQEVDGEKLDQPREVRRSMRTRNPVNYTVN--DLEDEGGLSHKESSGEDAM 1479

Query: 1055 HNKVIGNSLSGKXXXXXXXXXXXXXXXXEDFLESGGGFCSEV--TEPSQANLGDIGNAVV 882
              + + +    K                 D+LE+GGGFC +   T+   AN     +  +
Sbjct: 1480 EKEAVEDV---KEKIQCEAREPSLDNIDGDYLETGGGFCMDERGTDLPDAN----QDFDL 1532

Query: 881  EDQLSEGYLKMGGGFCLEDDAARGNTDEYPGKAAESSQVNSRSDGDPLAEDHISEEYLKI 702
            E + +  YLKMGGGFC+E D  + +T +               D +P +E   + +YLK+
Sbjct: 1533 ETEPTNDYLKMGGGFCMEGDIDQSDTSQ---------------DINPFSETGSANDYLKM 1577

Query: 701  GGGFCLDDDEAAD 663
            GGGFC+++ E  D
Sbjct: 1578 GGGFCMEESETID 1590


>XP_017609393.1 PREDICTED: DNA repair protein UVH3 isoform X2 [Gossypium arboreum]
          Length = 1700

 Score = 1018 bits (2633), Expect = 0.0
 Identities = 669/1633 (40%), Positives = 899/1633 (55%), Gaps = 125/1633 (7%)
 Frame = -1

Query: 5186 MGVHNLWELLAPVGRRVSVETLAGKKLAIDASIWMIQFMKAMRDEKGEMIRNAHLVGFFR 5007
            MGVH LWELLAPVGRRVSVETLAGKKLAIDASIWM+QFMKAMRDEKGEMIRNAHL+GFFR
Sbjct: 1    MGVHGLWELLAPVGRRVSVETLAGKKLAIDASIWMVQFMKAMRDEKGEMIRNAHLLGFFR 60

Query: 5006 RICKLLFLRVKPVFVFDGATPAL--------KRRTVIARRRQRENAQTKIRKTAEKLLL- 4854
            RICKLL+L+ KPVFVFDGATP L        +R+   A+ + R+ A+  +    +++ L 
Sbjct: 61   RICKLLYLKTKPVFVFDGATPILKRRTVIARRRQRENAQAKIRKTAEKLLLNQLKQMRLK 120

Query: 4853 -------NQLKAMR-----------------------------LKELQKNLQE------- 4803
                   NQ K  +                              KE    L+E       
Sbjct: 121  ELAKDLDNQRKMQKNNNKDKGKMVSSDNQSDTNFVGCNANVELTKEGDVKLKEKLEVPSI 180

Query: 4802 -----QRQQDDSEPKMVSSKIIEN----------------------AKGKRVV----DET 4716
                 Q + +D +  ++   I EN                      AKGK+++    +++
Sbjct: 181  AKDGGQNEDEDEDEVIILPDIDENIDPDVLAALPQSMQRQLLKQTDAKGKKILLNDLNQS 240

Query: 4715 IMANHLSEDENISAATCSREALDEMLAASIAAEEDGSFSPDASTSGAGVHYXXXXXXXXE 4536
                  +E + + + + S+E LDEMLAAS+A +ED + + +ASTS A +          E
Sbjct: 241  NKERSSTEHDAMKSTSYSQEKLDEMLAASLATKEDSNLA-NASTSVAAIPSEEDGDEDEE 299

Query: 4535 MILPAMHGNVDPAVLASLPPSMQLDLLVQMRERLMAENRQRYQKVKKVPSRFSELQIQAY 4356
            MILPAMHGNVDPAVLA+LPPS+QLDLL QMRERLMAENRQ+YQKVKK P +FSELQIQ+Y
Sbjct: 300  MILPAMHGNVDPAVLAALPPSLQLDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSY 359

Query: 4355 LKTVAFRREIDAVQKSAAGKGLGGMQTSRIASEANREFIFSSSFTGDKQVLASGGEVKTD 4176
            LKTVAFRREID VQ++AAG+G+ G+QTSRIASEANREFIFSSSFTGDKQ   S  + + +
Sbjct: 360  LKTVAFRREIDEVQRAAAGQGVAGVQTSRIASEANREFIFSSSFTGDKQAFTSARKERDE 419

Query: 4175 ARPTENSRVDVSSKAFNDIVSITRSNQTEECSRDTAGTELPKGVETYVDERGRIRVSRGR 3996
             +  E    D  S     + S  +SN   E   D + +   + V TY+DE GR+RVSR R
Sbjct: 420  DKQQERHS-DHPSGFLGSVKSSCKSNVAAESVPDESTSAPHEDVGTYLDETGRVRVSRVR 478

Query: 3995 AMGIRMTRDLQRNLELMKESEQVRVPSEEYVNNEXXXXXXXXXXXXXXXXXXXXP---KE 3825
             MGIRMTRDLQRNL+LMKE E+ R    + VN +                        ++
Sbjct: 479  GMGIRMTRDLQRNLDLMKEIEKERTNLNKGVNVQSVPDKSKIDASKSVSNGNQFVETSRD 538

Query: 3824 GNEAMLHTSQSYEDPTLQGVASLEISFETNGEQKS-GDDEDLFARLVAGETL-MNIPADS 3651
             N   ++ ++S      +  + +EI+FE +G+ +   DD+D+FA L AG+ + +  P + 
Sbjct: 539  DNGESVNVNESNRKSAFETESCMEITFEDDGKTEYFDDDDDIFACLAAGDPVTLPSPKEK 598

Query: 3650 SPAEKPSDLEDISASDCEWEDGVIDGKSAVLNKQTVHELNSYLAHDDMEDDSGVEWEDGC 3471
            S  ++ S     S SD EWE+GV++GK   +      E N      ++ DDS VEWE+  
Sbjct: 599  SLRKQASG----SDSDFEWEEGVVEGKWDDVTPGMNAEHNLLNKESNINDDSEVEWEEEP 654

Query: 3470 ASISKDVSPPPAECSESLSRGALEEEAEYQEAIRRSLVDLKGSGDSNASCENLKSGDAGL 3291
            +   K  S  P E    LS+G  EEE++ QEAIRRSL D+     ++   + ++S + G 
Sbjct: 655  SDAPKS-SSGPVESGRMLSKGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESKNLG- 712

Query: 3290 IDNLGESSSIINEYSIPESSIPVKDNVKSCKSSFETQTNKMIDNQVKLDMPQHSNNSETQ 3111
             +NL E    ++E     +S    D V     S E              +   + NS  +
Sbjct: 713  -ENLDEDFESLHEKGDTGASSFPGDAVNWQNKSCENLDRPQKPCTGNEPIISETFNSPER 771

Query: 3110 STPRLGVDLVGLELSPGDAPGRCSNSVQDKTNDLRTQEEIIERVKNCNPEKDILIQEQQG 2931
             +P    D     LS        S+S Q + N+       +E+  +    K + + E+  
Sbjct: 772  PSPVHNSDKNMTILSKFSERSDGSHSEQSRHNETAEFVATLEKEVDFPTGKHLDVSEEVD 831

Query: 2930 DIKSSKVXXXXXXXXXXXXXXXTPYTLSGDLHTFTHVDEPHLELEA-----KVDDRLHES 2766
             + +                         +     +V+   +E E      K+D     S
Sbjct: 832  GLSTISDSWFKVNSHSFDAAHDKKTVSENEPSNLVNVNTSSVEAEILDQDKKIDFEAKPS 891

Query: 2765 LISESSSFADVENKSDVENKSDFEPKSSPGHNVLHFEKEKYGG---------------NS 2631
              S  +    +       NK  F+         LH E+E  G                 S
Sbjct: 892  QQSVDTVDLSIPTVQSSANKVIFD---------LHIEQELSGDITYENCVNKAEQHTDMS 942

Query: 2630 SFIENMVEQVPXXXXXXXXXXXXXXXXXXXLGNEQRRLERNAESVSGEMFAECQELLQMF 2451
            +   N  E++                    + +EQR+LERNAESVS EMFAECQELLQMF
Sbjct: 943  TIKGNDNEEIQFSKASLDEELLILDQECINMVDEQRKLERNAESVSSEMFAECQELLQMF 1002

Query: 2450 GLPYIIAPMEAEAQCAFMELANLVDGVVTDDSDAFLFGARSVYKNIFDDRKYVETYFMKD 2271
            GLPYIIAPMEAEAQCA+MEL NLVDGVVTDDSD FLFGARSVYKNIFDDRKYVETYFM+D
Sbjct: 1003 GLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQD 1062

Query: 2270 IESELGLDRDKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLRQFRKWIESPDP 2091
            IE ELGL R+KL+RMALLLGSDYTEG+SGIGIVNAIEVVNAFPEEDGL +F++WIESPDP
Sbjct: 1063 IEKELGLTREKLMRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLHKFQEWIESPDP 1122

Query: 2090 SILGKFDVQEGCGSRKRGSKIRENE----KNKHGG--KLEGSSDCDLNM------XXXXX 1947
            +ILGK +VQEG  + KRG K  E +    K   GG     G+S  D N            
Sbjct: 1123 TILGKLNVQEGSSAWKRGPKSTEKDVNSTKTSTGGSESNNGASSLDQNSFQADKNMQSTD 1182

Query: 1946 XXXXXKQIFMEKHRNVSKNWHIPSTFPSDVVIAAYASPQVDNSTDSFSWGRPDLVTLHKV 1767
                 KQIFM+KHRNVSKNWHIPS+FPS+ VI+AY+ PQVD ST+ F+WGRPDL  L K+
Sbjct: 1183 CINDIKQIFMDKHRNVSKNWHIPSSFPSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKL 1242

Query: 1766 CWEKFGWGSKKADEVLLPVLKEYDKHETQLRLEAFYTFNEKFAKIRSKRIKSALKGVRGN 1587
            CWEKFGWGS+K+DE+LLPVL+EY+K ETQLR+EAFYTFNE+FAKIRSKRIK A+KG+ GN
Sbjct: 1243 CWEKFGWGSQKSDELLLPVLREYEKRETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGN 1302

Query: 1586 KSEDVMNDSGEGDSKNRKRRKANYVEAKTNEVEKDSGLRDH--GVIKQKIAKILKPKQSR 1413
            +S ++++D  +  SK+R +R+ + V++  ++  + S  ++      + K      PK SR
Sbjct: 1303 QSSELIDDGMQQASKSRNKRRVSPVQSGDDKSGEPSNKKEDIASQCQSKSTDKSVPKTSR 1362

Query: 1412 GRNSQGEAVEGIDTQPSEEASMTXXXXXXXXXXXXXXXXXXXXXRKKNKINSCLEDVGTS 1233
             R + G+ V   + +  E    T                      ++ K +S  +   TS
Sbjct: 1363 KRQNSGKDV-SFEMRTPEPQLRTLRRRKTNKQSAGNGRGRGGGEGRRRKGSSGFQQFETS 1421

Query: 1232 SD-GEFNNETEERAPWEFERPSKVRRSERPRKAVNYTISNEDILEECCATTSKLDGFETS 1056
            S  G+  N+ +E    + ++P +VRRS R R  VNYT++  D+ +E   +  +  G +  
Sbjct: 1422 SSGGDSGNDNQEVDGEKLDQPREVRRSMRTRNPVNYTVN--DLEDEGGLSHKESSGEDAM 1479

Query: 1055 HNKVIGNSLSGKXXXXXXXXXXXXXXXXEDFLESGGGFCSEV--TEPSQANLGDIGNAVV 882
              + + +    K                 D+LE+GGGFC +   T+   AN     +  +
Sbjct: 1480 EKEAVEDV---KEKIQCEAREPSLDNIDGDYLETGGGFCMDERGTDLPDAN----QDFDL 1532

Query: 881  EDQLSEGYLKMGGGFCLEDDAARGNTDEYPGKAAESSQVNSRSDGDPLAEDHISEEYLKI 702
            E + +  YLKMGGGFC+E D  + +T +               D +P +E   + +YLK+
Sbjct: 1533 ETEPTNDYLKMGGGFCMEGDIDQSDTSQ---------------DINPFSETGSANDYLKM 1577

Query: 701  GGGFCLDDDEAAD 663
            GGGFC+++ E  D
Sbjct: 1578 GGGFCMEESETID 1590


>XP_017609388.1 PREDICTED: DNA repair protein UVH3 isoform X1 [Gossypium arboreum]
          Length = 1701

 Score = 1018 bits (2633), Expect = 0.0
 Identities = 669/1633 (40%), Positives = 899/1633 (55%), Gaps = 125/1633 (7%)
 Frame = -1

Query: 5186 MGVHNLWELLAPVGRRVSVETLAGKKLAIDASIWMIQFMKAMRDEKGEMIRNAHLVGFFR 5007
            MGVH LWELLAPVGRRVSVETLAGKKLAIDASIWM+QFMKAMRDEKGEMIRNAHL+GFFR
Sbjct: 1    MGVHGLWELLAPVGRRVSVETLAGKKLAIDASIWMVQFMKAMRDEKGEMIRNAHLLGFFR 60

Query: 5006 RICKLLFLRVKPVFVFDGATPAL--------KRRTVIARRRQRENAQTKIRKTAEKLLL- 4854
            RICKLL+L+ KPVFVFDGATP L        +R+   A+ + R+ A+  +    +++ L 
Sbjct: 61   RICKLLYLKTKPVFVFDGATPILKRRTVIARRRQRENAQAKIRKTAEKLLLNQLKQMRLK 120

Query: 4853 -------NQLKAMR-----------------------------LKELQKNLQE------- 4803
                   NQ K  +                              KE    L+E       
Sbjct: 121  ELAKDLDNQRKMQKNNNKDKGKMVSSDNQSDTNFVGCNANVELTKEGDVKLKEKLEVPSI 180

Query: 4802 -----QRQQDDSEPKMVSSKIIEN----------------------AKGKRVV----DET 4716
                 Q + +D +  ++   I EN                      AKGK+++    +++
Sbjct: 181  AKDGGQNEDEDEDEVIILPDIDENIDPDVLAALPQSMQRQLLKQTDAKGKKILLNDLNQS 240

Query: 4715 IMANHLSEDENISAATCSREALDEMLAASIAAEEDGSFSPDASTSGAGVHYXXXXXXXXE 4536
                  +E + + + + S+E LDEMLAAS+A +ED + + +ASTS A +          E
Sbjct: 241  NKERSSTEHDAMKSTSYSQEKLDEMLAASLATKEDSNLA-NASTSVAAIPSEEDGDEDEE 299

Query: 4535 MILPAMHGNVDPAVLASLPPSMQLDLLVQMRERLMAENRQRYQKVKKVPSRFSELQIQAY 4356
            MILPAMHGNVDPAVLA+LPPS+QLDLL QMRERLMAENRQ+YQKVKK P +FSELQIQ+Y
Sbjct: 300  MILPAMHGNVDPAVLAALPPSLQLDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSY 359

Query: 4355 LKTVAFRREIDAVQKSAAGKGLGGMQTSRIASEANREFIFSSSFTGDKQVLASGGEVKTD 4176
            LKTVAFRREID VQ++AAG+G+ G+QTSRIASEANREFIFSSSFTGDKQ   S  + + +
Sbjct: 360  LKTVAFRREIDEVQRAAAGQGVAGVQTSRIASEANREFIFSSSFTGDKQAFTSARKERDE 419

Query: 4175 ARPTENSRVDVSSKAFNDIVSITRSNQTEECSRDTAGTELPKGVETYVDERGRIRVSRGR 3996
             +  E    D  S     + S  +SN   E   D + +   + V TY+DE GR+RVSR R
Sbjct: 420  DKQQERHS-DHPSGFLGSVKSSCKSNVAAESVPDESTSAPHEDVGTYLDETGRVRVSRVR 478

Query: 3995 AMGIRMTRDLQRNLELMKESEQVRVPSEEYVNNEXXXXXXXXXXXXXXXXXXXXP---KE 3825
             MGIRMTRDLQRNL+LMKE E+ R    + VN +                        ++
Sbjct: 479  GMGIRMTRDLQRNLDLMKEIEKERTNLNKGVNVQSVPDKSKIDASKSVSNGNQFVETSRD 538

Query: 3824 GNEAMLHTSQSYEDPTLQGVASLEISFETNGEQKS-GDDEDLFARLVAGETL-MNIPADS 3651
             N   ++ ++S      +  + +EI+FE +G+ +   DD+D+FA L AG+ + +  P + 
Sbjct: 539  DNGESVNVNESNRKSAFETESCMEITFEDDGKTEYFDDDDDIFACLAAGDPVTLPSPKEK 598

Query: 3650 SPAEKPSDLEDISASDCEWEDGVIDGKSAVLNKQTVHELNSYLAHDDMEDDSGVEWEDGC 3471
            S  ++ S     S SD EWE+GV++GK   +      E N      ++ DDS VEWE+  
Sbjct: 599  SLRKQASG----SDSDFEWEEGVVEGKWDDVTPGMNAEHNLLNKESNINDDSEVEWEEEP 654

Query: 3470 ASISKDVSPPPAECSESLSRGALEEEAEYQEAIRRSLVDLKGSGDSNASCENLKSGDAGL 3291
            +   K  S  P E    LS+G  EEE++ QEAIRRSL D+     ++   + ++S + G 
Sbjct: 655  SDAPKS-SSGPVESGRMLSKGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESKNLG- 712

Query: 3290 IDNLGESSSIINEYSIPESSIPVKDNVKSCKSSFETQTNKMIDNQVKLDMPQHSNNSETQ 3111
             +NL E    ++E     +S    D V     S E              +   + NS  +
Sbjct: 713  -ENLDEDFESLHEKGDTGASSFPGDAVNWQNKSCENLDRPQKPCTGNEPIISETFNSPER 771

Query: 3110 STPRLGVDLVGLELSPGDAPGRCSNSVQDKTNDLRTQEEIIERVKNCNPEKDILIQEQQG 2931
             +P    D     LS        S+S Q + N+       +E+  +    K + + E+  
Sbjct: 772  PSPVHNSDKNMTILSKFSERSDGSHSEQSRHNETAEFVATLEKEVDFPTGKHLDVSEEVD 831

Query: 2930 DIKSSKVXXXXXXXXXXXXXXXTPYTLSGDLHTFTHVDEPHLELEA-----KVDDRLHES 2766
             + +                         +     +V+   +E E      K+D     S
Sbjct: 832  GLSTISDSWFKVNSHSFDAAHDKKTVSENEPSNLVNVNTSSVEAEILDQDKKIDFEAKPS 891

Query: 2765 LISESSSFADVENKSDVENKSDFEPKSSPGHNVLHFEKEKYGG---------------NS 2631
              S  +    +       NK  F+         LH E+E  G                 S
Sbjct: 892  QQSVDTVDLSIPTVQSSANKVIFD---------LHIEQELSGDITYENCVNKAEQHTDMS 942

Query: 2630 SFIENMVEQVPXXXXXXXXXXXXXXXXXXXLGNEQRRLERNAESVSGEMFAECQELLQMF 2451
            +   N  E++                    + +EQR+LERNAESVS EMFAECQELLQMF
Sbjct: 943  TIKGNDNEEIQFSKASLDEELLILDQECINMVDEQRKLERNAESVSSEMFAECQELLQMF 1002

Query: 2450 GLPYIIAPMEAEAQCAFMELANLVDGVVTDDSDAFLFGARSVYKNIFDDRKYVETYFMKD 2271
            GLPYIIAPMEAEAQCA+MEL NLVDGVVTDDSD FLFGARSVYKNIFDDRKYVETYFM+D
Sbjct: 1003 GLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQD 1062

Query: 2270 IESELGLDRDKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLRQFRKWIESPDP 2091
            IE ELGL R+KL+RMALLLGSDYTEG+SGIGIVNAIEVVNAFPEEDGL +F++WIESPDP
Sbjct: 1063 IEKELGLTREKLMRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLHKFQEWIESPDP 1122

Query: 2090 SILGKFDVQEGCGSRKRGSKIRENE----KNKHGG--KLEGSSDCDLNM------XXXXX 1947
            +ILGK +VQEG  + KRG K  E +    K   GG     G+S  D N            
Sbjct: 1123 TILGKLNVQEGSSAWKRGPKSTEKDVNSTKTSTGGSESNNGASSLDQNSFQADKNMQSTD 1182

Query: 1946 XXXXXKQIFMEKHRNVSKNWHIPSTFPSDVVIAAYASPQVDNSTDSFSWGRPDLVTLHKV 1767
                 KQIFM+KHRNVSKNWHIPS+FPS+ VI+AY+ PQVD ST+ F+WGRPDL  L K+
Sbjct: 1183 CINDIKQIFMDKHRNVSKNWHIPSSFPSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKL 1242

Query: 1766 CWEKFGWGSKKADEVLLPVLKEYDKHETQLRLEAFYTFNEKFAKIRSKRIKSALKGVRGN 1587
            CWEKFGWGS+K+DE+LLPVL+EY+K ETQLR+EAFYTFNE+FAKIRSKRIK A+KG+ GN
Sbjct: 1243 CWEKFGWGSQKSDELLLPVLREYEKRETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGN 1302

Query: 1586 KSEDVMNDSGEGDSKNRKRRKANYVEAKTNEVEKDSGLRDH--GVIKQKIAKILKPKQSR 1413
            +S ++++D  +  SK+R +R+ + V++  ++  + S  ++      + K      PK SR
Sbjct: 1303 QSSELIDDGMQQASKSRNKRRVSPVQSGDDKSGEPSNKKEDIASQCQSKSTDKSVPKTSR 1362

Query: 1412 GRNSQGEAVEGIDTQPSEEASMTXXXXXXXXXXXXXXXXXXXXXRKKNKINSCLEDVGTS 1233
             R + G+ V   + +  E    T                      ++ K +S  +   TS
Sbjct: 1363 KRQNSGKDV-SFEMRTPEPQLRTLRRRKTNKQSAGNGRGRGGGEGRRRKGSSGFQQFETS 1421

Query: 1232 SD-GEFNNETEERAPWEFERPSKVRRSERPRKAVNYTISNEDILEECCATTSKLDGFETS 1056
            S  G+  N+ +E    + ++P +VRRS R R  VNYT++  D+ +E   +  +  G +  
Sbjct: 1422 SSGGDSGNDNQEVDGEKLDQPREVRRSMRTRNPVNYTVN--DLEDEGGLSHKESSGEDAM 1479

Query: 1055 HNKVIGNSLSGKXXXXXXXXXXXXXXXXEDFLESGGGFCSEV--TEPSQANLGDIGNAVV 882
              + + +    K                 D+LE+GGGFC +   T+   AN     +  +
Sbjct: 1480 EKEAVEDV---KEKIQCEAREPSLDNIDGDYLETGGGFCMDERGTDLPDAN----QDFDL 1532

Query: 881  EDQLSEGYLKMGGGFCLEDDAARGNTDEYPGKAAESSQVNSRSDGDPLAEDHISEEYLKI 702
            E + +  YLKMGGGFC+E D  + +T +               D +P +E   + +YLK+
Sbjct: 1533 ETEPTNDYLKMGGGFCMEGDIDQSDTSQ---------------DINPFSETGSANDYLKM 1577

Query: 701  GGGFCLDDDEAAD 663
            GGGFC+++ E  D
Sbjct: 1578 GGGFCMEESETID 1590


>KHG04183.1 DNA repair UVH3 -like protein [Gossypium arboreum]
          Length = 1697

 Score = 1018 bits (2633), Expect = 0.0
 Identities = 669/1633 (40%), Positives = 899/1633 (55%), Gaps = 125/1633 (7%)
 Frame = -1

Query: 5186 MGVHNLWELLAPVGRRVSVETLAGKKLAIDASIWMIQFMKAMRDEKGEMIRNAHLVGFFR 5007
            MGVH LWELLAPVGRRVSVETLAGKKLAIDASIWM+QFMKAMRDEKGEMIRNAHL+GFFR
Sbjct: 1    MGVHGLWELLAPVGRRVSVETLAGKKLAIDASIWMVQFMKAMRDEKGEMIRNAHLLGFFR 60

Query: 5006 RICKLLFLRVKPVFVFDGATPAL--------KRRTVIARRRQRENAQTKIRKTAEKLLL- 4854
            RICKLL+L+ KPVFVFDGATP L        +R+   A+ + R+ A+  +    +++ L 
Sbjct: 61   RICKLLYLKTKPVFVFDGATPILKRRTVIARRRQRENAQAKIRKTAEKLLLNQLKQMRLK 120

Query: 4853 -------NQLKAMR-----------------------------LKELQKNLQE------- 4803
                   NQ K  +                              KE    L+E       
Sbjct: 121  ELAKDLDNQRKMQKNNNKDKGKMVSSDNQSDTNFVGCNANVELTKEGDVKLKEKLEVPSI 180

Query: 4802 -----QRQQDDSEPKMVSSKIIEN----------------------AKGKRVV----DET 4716
                 Q + +D +  ++   I EN                      AKGK+++    +++
Sbjct: 181  AKDGGQNEDEDEDEVIILPDIDENIDPDVLAALPQSMQRQLLKQTDAKGKKILLNDLNQS 240

Query: 4715 IMANHLSEDENISAATCSREALDEMLAASIAAEEDGSFSPDASTSGAGVHYXXXXXXXXE 4536
                  +E + + + + S+E LDEMLAAS+A +ED + + +ASTS A +          E
Sbjct: 241  NKERSSTEHDAMKSTSYSQEKLDEMLAASLATKEDSNLA-NASTSVAAIPSEEDGDEDEE 299

Query: 4535 MILPAMHGNVDPAVLASLPPSMQLDLLVQMRERLMAENRQRYQKVKKVPSRFSELQIQAY 4356
            MILPAMHGNVDPAVLA+LPPS+QLDLL QMRERLMAENRQ+YQKVKK P +FSELQIQ+Y
Sbjct: 300  MILPAMHGNVDPAVLAALPPSLQLDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSY 359

Query: 4355 LKTVAFRREIDAVQKSAAGKGLGGMQTSRIASEANREFIFSSSFTGDKQVLASGGEVKTD 4176
            LKTVAFRREID VQ++AAG+G+ G+QTSRIASEANREFIFSSSFTGDKQ   S  + + +
Sbjct: 360  LKTVAFRREIDEVQRAAAGQGVAGVQTSRIASEANREFIFSSSFTGDKQAFTSARKERDE 419

Query: 4175 ARPTENSRVDVSSKAFNDIVSITRSNQTEECSRDTAGTELPKGVETYVDERGRIRVSRGR 3996
             +  E    D  S     + S  +SN   E   D + +   + V TY+DE GR+RVSR R
Sbjct: 420  DKQQERHS-DHPSGFLGSVKSSCKSNVAAESVPDESTSAPHEDVGTYLDETGRVRVSRVR 478

Query: 3995 AMGIRMTRDLQRNLELMKESEQVRVPSEEYVNNEXXXXXXXXXXXXXXXXXXXXP---KE 3825
             MGIRMTRDLQRNL+LMKE E+ R    + VN +                        ++
Sbjct: 479  GMGIRMTRDLQRNLDLMKEIEKERTNLNKGVNVQSVPDKSKIDASKSVSNGNQFVETSRD 538

Query: 3824 GNEAMLHTSQSYEDPTLQGVASLEISFETNGEQKS-GDDEDLFARLVAGETL-MNIPADS 3651
             N   ++ ++S      +  + +EI+FE +G+ +   DD+D+FA L AG+ + +  P + 
Sbjct: 539  DNGESVNVNESNRKSAFETESCMEITFEDDGKTEYFDDDDDIFACLAAGDPVTLPSPKEK 598

Query: 3650 SPAEKPSDLEDISASDCEWEDGVIDGKSAVLNKQTVHELNSYLAHDDMEDDSGVEWEDGC 3471
            S  ++ S     S SD EWE+GV++GK   +      E N      ++ DDS VEWE+  
Sbjct: 599  SLRKQASG----SDSDFEWEEGVVEGKWDDVTPGMNAEHNLLNKESNINDDSEVEWEEEP 654

Query: 3470 ASISKDVSPPPAECSESLSRGALEEEAEYQEAIRRSLVDLKGSGDSNASCENLKSGDAGL 3291
            +   K  S  P E    LS+G  EEE++ QEAIRRSL D+     ++   + ++S + G 
Sbjct: 655  SDAPKS-SSGPVESGRMLSKGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESKNLG- 712

Query: 3290 IDNLGESSSIINEYSIPESSIPVKDNVKSCKSSFETQTNKMIDNQVKLDMPQHSNNSETQ 3111
             +NL E    ++E     +S    D V     S E              +   + NS  +
Sbjct: 713  -ENLDEDFESLHEKGDTGASSFPGDAVNWQNKSCENLDRPQKPCTGNEPIISETFNSPER 771

Query: 3110 STPRLGVDLVGLELSPGDAPGRCSNSVQDKTNDLRTQEEIIERVKNCNPEKDILIQEQQG 2931
             +P    D     LS        S+S Q + N+       +E+  +    K + + E+  
Sbjct: 772  PSPVHNSDKNMTILSKFSERSDGSHSEQSRHNETAEFVATLEKEVDFPTGKHLDVSEEVD 831

Query: 2930 DIKSSKVXXXXXXXXXXXXXXXTPYTLSGDLHTFTHVDEPHLELEA-----KVDDRLHES 2766
             + +                         +     +V+   +E E      K+D     S
Sbjct: 832  GLSTISDSWFKVNSHSFDAAHDKKTVSENEPSNLVNVNTSSVEAEILDQDKKIDFEAKPS 891

Query: 2765 LISESSSFADVENKSDVENKSDFEPKSSPGHNVLHFEKEKYGG---------------NS 2631
              S  +    +       NK  F+         LH E+E  G                 S
Sbjct: 892  QQSVDTVDLSIPTVQSSANKVIFD---------LHIEQELSGDITYENCVNKAEQHTDMS 942

Query: 2630 SFIENMVEQVPXXXXXXXXXXXXXXXXXXXLGNEQRRLERNAESVSGEMFAECQELLQMF 2451
            +   N  E++                    + +EQR+LERNAESVS EMFAECQELLQMF
Sbjct: 943  TIKGNDNEEIKFSKASLDEELLILDQECINMVDEQRKLERNAESVSSEMFAECQELLQMF 1002

Query: 2450 GLPYIIAPMEAEAQCAFMELANLVDGVVTDDSDAFLFGARSVYKNIFDDRKYVETYFMKD 2271
            GLPYIIAPMEAEAQCA+MEL NLVDGVVTDDSD FLFGARSVYKNIFDDRKYVETYFM+D
Sbjct: 1003 GLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQD 1062

Query: 2270 IESELGLDRDKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLRQFRKWIESPDP 2091
            IE ELGL R+KL+RMALLLGSDYTEG+SGIGIVNAIEVVNAFPEEDGL +F++WIESPDP
Sbjct: 1063 IEKELGLTREKLMRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLHKFQEWIESPDP 1122

Query: 2090 SILGKFDVQEGCGSRKRGSKIRENE----KNKHGG--KLEGSSDCDLNM------XXXXX 1947
            +ILGK +VQEG  + KRG K  E +    K   GG     G+S  D N            
Sbjct: 1123 TILGKLNVQEGSSAWKRGPKSTEKDVNSTKTSTGGSESNNGASSLDQNSFQADKNMQSTD 1182

Query: 1946 XXXXXKQIFMEKHRNVSKNWHIPSTFPSDVVIAAYASPQVDNSTDSFSWGRPDLVTLHKV 1767
                 KQIFM+KHRNVSKNWHIPS+FPS+ VI+AY+ PQVD ST+ F+WGRPDL  L K+
Sbjct: 1183 CINDIKQIFMDKHRNVSKNWHIPSSFPSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKL 1242

Query: 1766 CWEKFGWGSKKADEVLLPVLKEYDKHETQLRLEAFYTFNEKFAKIRSKRIKSALKGVRGN 1587
            CWEKFGWGS+K+DE+LLPVL+EY+K ETQLR+EAFYTFNE+FAKIRSKRIK A+KG+ GN
Sbjct: 1243 CWEKFGWGSQKSDELLLPVLREYEKRETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGN 1302

Query: 1586 KSEDVMNDSGEGDSKNRKRRKANYVEAKTNEVEKDSGLRDH--GVIKQKIAKILKPKQSR 1413
            +S ++++D  +  SK+R +R+ + V++  ++  + S  ++      + K      PK SR
Sbjct: 1303 QSSELIDDGMQQASKSRNKRRVSPVQSGDDKSGEPSNKKEDIASQCQSKSTDKSVPKTSR 1362

Query: 1412 GRNSQGEAVEGIDTQPSEEASMTXXXXXXXXXXXXXXXXXXXXXRKKNKINSCLEDVGTS 1233
             R + G+ V   + +  E    T                      ++ K +S  +   TS
Sbjct: 1363 KRQNSGKDV-SFEMRTPEPQLRTLRRRKTNKQSAGNGRGRGGGEGRRRKGSSGFQQFETS 1421

Query: 1232 SD-GEFNNETEERAPWEFERPSKVRRSERPRKAVNYTISNEDILEECCATTSKLDGFETS 1056
            S  G+  N+ +E    + ++P +VRRS R R  VNYT++  D+ +E   +  +  G +  
Sbjct: 1422 SSGGDSGNDNQEVDGEKLDQPREVRRSMRTRNPVNYTVN--DLEDEGGLSHKESSGEDAM 1479

Query: 1055 HNKVIGNSLSGKXXXXXXXXXXXXXXXXEDFLESGGGFCSEV--TEPSQANLGDIGNAVV 882
              + + +    K                 D+LE+GGGFC +   T+   AN     +  +
Sbjct: 1480 EKEAVEDV---KEKIQCEAREPSLDNIDGDYLETGGGFCMDERGTDLPDAN----QDFDL 1532

Query: 881  EDQLSEGYLKMGGGFCLEDDAARGNTDEYPGKAAESSQVNSRSDGDPLAEDHISEEYLKI 702
            E + +  YLKMGGGFC+E D  + +T +               D +P +E   + +YLK+
Sbjct: 1533 ETEPTNDYLKMGGGFCMEGDIDQSDTSQ---------------DINPFSETGSANDYLKM 1577

Query: 701  GGGFCLDDDEAAD 663
            GGGFC+++ E  D
Sbjct: 1578 GGGFCMEESETID 1590


>XP_016746864.1 PREDICTED: DNA repair protein UVH3-like isoform X5 [Gossypium
            hirsutum]
          Length = 1682

 Score = 1017 bits (2630), Expect = 0.0
 Identities = 672/1656 (40%), Positives = 909/1656 (54%), Gaps = 134/1656 (8%)
 Frame = -1

Query: 5186 MGVHNLWELLAPVGRRVSVETLAGKKLAIDASIWMIQFMKAMRDEKGEMIRNAHLVGFFR 5007
            MGVH LWELLAPVGRRVSVETLAGKKLAIDASIWM+QFMKAMRDEKGEMIRNAHL+GFFR
Sbjct: 1    MGVHGLWELLAPVGRRVSVETLAGKKLAIDASIWMVQFMKAMRDEKGEMIRNAHLLGFFR 60

Query: 5006 RICKLLFLRVKPVFVFDGATPAL--------KRRTVIARRRQRENAQTKIRKTAEKLLL- 4854
            RICKLL+L+ KPVFVFDGATP L        +R+   A+ + R+ A+  +    +++ L 
Sbjct: 61   RICKLLYLKTKPVFVFDGATPILKRRTVIARRRQRENAQAKIRKTAEKLLLNQLKQMRLK 120

Query: 4853 -------NQLKAMR-----------------------------LKELQKNLQE------- 4803
                   NQ K  +                              KE    L+E       
Sbjct: 121  ELAKDLDNQRKMQKNNNKDKGKMVSSDNQSDTNFVGCNANVELTKEGDVKLKEKLEVPSI 180

Query: 4802 -----QRQQDDSEPKMVSSKIIEN----------------------AKGKRVV----DET 4716
                 Q + +D +  ++   I EN                      AKGK+++    +++
Sbjct: 181  AKDGGQNEDEDEDEVIILPDIDENIDPDVLAALPQSMQRQLLKQTDAKGKKILLNDLNQS 240

Query: 4715 IMANHLSEDENISAATCSREALDEMLAASIAAEEDGSFSPDASTSGAGVHYXXXXXXXXE 4536
                  +E + + + + S+E LDEMLAAS+A +ED + + +ASTS A +          E
Sbjct: 241  NKERSSTEHDAMKSTSYSQEKLDEMLAASLATKEDSNLA-NASTSVAAIPSEEDGDEDEE 299

Query: 4535 MILPAMHGNVDPAVLASLPPSMQLDLLVQMRERLMAENRQRYQKVKKVPSRFSELQIQAY 4356
            MILPAMHGNVDPAVLA+LPPS+QLDLL QMRERLMAENRQ+YQKVKK P +FSELQIQ+Y
Sbjct: 300  MILPAMHGNVDPAVLAALPPSLQLDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSY 359

Query: 4355 LKTVAFRREIDAVQKSAAGKGLGGMQTSRIASEANREFIFSSSFTGDKQVLASGGEVKTD 4176
            LKTVAFRREID VQ++AAG+G+ G+QTSRIASEANREFIFSSSFTGDKQ   S  + + +
Sbjct: 360  LKTVAFRREIDEVQRAAAGQGVAGVQTSRIASEANREFIFSSSFTGDKQAFTSARKERDE 419

Query: 4175 ARPTENSRVDVSSKAFNDIVSITRSNQTEECSRDTAGTELPKGVETYVDERGRIRVSRGR 3996
             +  E    D  S     + S  +SN   E   D + +   + V TY+DE GR+RVSR R
Sbjct: 420  DKQQERHS-DHPSGFLGSVKSSCKSNVAAESVPDESTSAPHEDVGTYLDETGRVRVSRVR 478

Query: 3995 AMGIRMTRDLQRNLELMKESEQVRVPSEEYVNNEXXXXXXXXXXXXXXXXXXXXP---KE 3825
             MGIRMTRDLQRNL+LMKE E+ R    + VN +                        ++
Sbjct: 479  GMGIRMTRDLQRNLDLMKEIEKERTNLNKGVNVQSVPDKSKIDASKSVSNGNQFVETSRD 538

Query: 3824 GNEAMLHTSQSYEDPTLQGVASLEISFETNGEQKS-GDDEDLFARLVAGETL-MNIPADS 3651
             N   ++ ++S      +  + +EI+FE +G+ +   DD+D+FA L AG+ + +  P + 
Sbjct: 539  DNGESVNVNESNRKSAFETESCMEITFEDDGKTEYFDDDDDIFACLAAGDPVTLPSPKEK 598

Query: 3650 SPAEKPSDLEDISASDCEWEDGVIDGKSAVLNKQTVHELNSYLAHDDMEDDSGVEWEDGC 3471
            S  ++ S     S SD EWE+GV++GK   +      E N      ++ DDS VEWE+  
Sbjct: 599  SLRKQASG----SDSDFEWEEGVVEGKWDDVTPGMNAEHNLLNKESNINDDSEVEWEEEP 654

Query: 3470 ASISKDVSPPPAECSESLSRGALEEEAEYQEAIRRSLVDLKGSGDSNASCENLKSGDAGL 3291
            +   K  S  P E    LS+G  EEE++ QEAIRRSL D+     ++   + ++S + G 
Sbjct: 655  SDAPKS-SSGPVESGRMLSKGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESKNLG- 712

Query: 3290 IDNLGESSSIINEYSIPESSIPVKDNVKSCKSSFETQTNKMIDNQVKLDMPQHSNNSETQ 3111
             +NL E    ++E     +S    D V     S E              +   + NS  +
Sbjct: 713  -ENLDEDFESLHEKGDTGASSFPGDAVNWQNKSCENLDRPQKPCTGNEPIISETFNSPER 771

Query: 3110 STPRLGVDLVGLELSPGDAPGRCSNSVQDKTNDLRTQEEIIERVKNCNPEKDILIQEQQG 2931
             +P    D     LS        S+S Q + N+       +E+  +    K + + E+  
Sbjct: 772  PSPVHNSDKNMTILSKFSERSDGSHSEQSRHNETAEFVATLEKEVDFPTGKHLDVSEEVD 831

Query: 2930 DIKSSKVXXXXXXXXXXXXXXXTPYTLSGDLHTFTHVDEPHLELEAKVDDRLHESLISES 2751
             + +                         + H+F    +     E +  + ++++  S  
Sbjct: 832  GLSTISDSWFKV-----------------NSHSFDAAHDKKTVSENEPSNLVNDNTSSVE 874

Query: 2750 SSFADVENKSDVENKSDFEPKSSPGHNV-------------LHFEKEKYGG--------- 2637
            +   D + K D E K   +   +   ++             LH E+E  G          
Sbjct: 875  AEILDQDKKIDFEAKPSQQSVDTVDLSIPTVQSSANKVIFDLHIEQELSGDITYENCVNK 934

Query: 2636 ------NSSFIENMVEQVPXXXXXXXXXXXXXXXXXXXLGNEQRRLERNAESVSGEMFAE 2475
                   S+   N  E++                    + +EQR+LERNAESVS EMFAE
Sbjct: 935  AEQHTDMSTIKGNDNEEIKFSKASLDEEQLILDQECINMVDEQRKLERNAESVSSEMFAE 994

Query: 2474 CQELLQMFGLPYIIAPMEAEAQCAFMELANLVDGVVTDDSDAFLFGARSVYKNIFDDRKY 2295
            CQELLQMFGLPYIIAPMEAEAQCA+MEL NLVDGVVTDDSD FLFGARSVYKNIFDDRKY
Sbjct: 995  CQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDVFLFGARSVYKNIFDDRKY 1054

Query: 2294 VETYFMKDIESELGLDRDKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLRQFR 2115
            VETYFM+DIE ELGL R+KL+RMALLLGSDYTEG+SGIGIVNAIEVVNAFPEEDGL +FR
Sbjct: 1055 VETYFMQDIEKELGLTREKLMRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLHKFR 1114

Query: 2114 KWIESPDPSILGKFDVQEGCGSRKRGSKIRENE----KNKHGG--KLEGSSDCDLNM--- 1962
             WIESPDP+ILGK +VQEG  + KRG K  E +    K   GG     G+S  D N    
Sbjct: 1115 VWIESPDPTILGKLNVQEGSSAWKRGPKSTEKDVNSTKTSTGGSESNNGASSFDQNSFQA 1174

Query: 1961 ---XXXXXXXXXXKQIFMEKHRNVSKNWHIPSTFPSDVVIAAYASPQVDNSTDSFSWGRP 1791
                         KQIFM+KHRNVSKNWHIPS+FPS+ VI+AY+ PQVD ST+ F+WGRP
Sbjct: 1175 DKNMQSTDCINDIKQIFMDKHRNVSKNWHIPSSFPSEAVISAYSLPQVDKSTEPFTWGRP 1234

Query: 1790 DLVTLHKVCWEKFGWGSKKADEVLLPVLKEYDKHETQLRLEAFYTFNEKFAKIRSKRIKS 1611
            DL  L K+CWEKFGWGS+K+DE+LLPVL+EY+K ETQLR+EAFYTFNE+FAKIRSKRIK 
Sbjct: 1235 DLFVLRKLCWEKFGWGSQKSDELLLPVLREYEKRETQLRMEAFYTFNERFAKIRSKRIKK 1294

Query: 1610 ALKGVRGNKSEDVMNDSGEGDSKNRKRRKANYVEAKTNEVEKDSGLRDHGVIKQKIAKIL 1431
            A+KG+ G +S ++++D  +  SK+R +R+ + V++  ++  + S  ++  +  Q  +K +
Sbjct: 1295 AVKGITGKQSSELIDDGMQQASKSRNKRRVSPVQSGDDKSGEPSNKKE-DIASQCQSKSM 1353

Query: 1430 K---PKQSRGRNSQGEAVEGIDTQPSEEASMTXXXXXXXXXXXXXXXXXXXXXRKKNKIN 1260
                PK SR R + G+ V   + +  E    T                      ++ K +
Sbjct: 1354 DKSVPKTSRKRQNSGKDV-SFEMRTPEPQLRTLCRRKTNKQSAGNGRGRGGGEGRRRKGS 1412

Query: 1259 SCLEDVGTSSD-GEFNNETEERAPWEFERPSKVRRSERPRKAVNYTISNEDILEECCATT 1083
            S  +   TSS  G+  N+ +E    + ++P +VRRS R R  VNYT++  D+ +E   + 
Sbjct: 1413 SGFQQFETSSSGGDSGNDNQEVDGEKLDQPREVRRSMRTRNPVNYTVN--DLEDEGGLSH 1470

Query: 1082 SKLDGFETSHNKVIGNSLSGKXXXXXXXXXXXXXXXXEDFLESGGGFCSEV--TEPSQAN 909
             +  G +    + + +    K                 D+LE+GGGFC +   T+   AN
Sbjct: 1471 KESSGEDAMEKEAVEDV---KEKIQCEAREPSLDNIDGDYLETGGGFCMDERGTDLPDAN 1527

Query: 908  LGDIGNAVVEDQLSEGYLKMGGGFCLEDDAARGNTDEYPGKAAESSQVNSRSDGDPLAED 729
                 +  +E + +  YLKMGGGFC+E D  + +T +               D +P +E 
Sbjct: 1528 ----QDFDLETEPTNDYLKMGGGFCMEGDIDQPDTSQ---------------DINPFSES 1568

Query: 728  HISEEYLKIGGGFCLDDDEAADGNRDNRPSVTKPNS 621
              + +YLK+GGGFC+++ E  D      P V    S
Sbjct: 1569 GSANDYLKMGGGFCMEESETIDNPDAAEPFVNAEGS 1604


>KJB11465.1 hypothetical protein B456_001G260400 [Gossypium raimondii]
          Length = 1667

 Score =  965 bits (2495), Expect = 0.0
 Identities = 654/1614 (40%), Positives = 878/1614 (54%), Gaps = 136/1614 (8%)
 Frame = -1

Query: 5084 MIQFMKAMRDEKGEMIRNAHLVGFFRRICKLLFLRVKPVFVFDGATPAL--------KRR 4929
            M+QFMKAMRDEKGEMIRNAHL+GFFRRICKLL+L+ KPVFVFDGATP L        +R+
Sbjct: 1    MVQFMKAMRDEKGEMIRNAHLLGFFRRICKLLYLKTKPVFVFDGATPILKRRTVIARRRQ 60

Query: 4928 TVIARRRQRENAQTKIRKTAEKLLL--------NQLKA---------------------- 4839
               A+ + R+ A+  +    +++ L        NQ K                       
Sbjct: 61   RENAQAKIRKTAEKLLLNQLKQMRLKELAKDLDNQRKMQKNNNKDKGKMVSSDNQSDTNF 120

Query: 4838 --------------MRLKE------LQKNLQEQRQQDDSEPKMVSSKIIEN--------- 4746
                          ++LKE      + K+      +D+ E +++    I+          
Sbjct: 121  VGCNANVELTKEGDVKLKEKLEVPSIAKDGGHNEDEDEDEDEVIILPDIDGNIDPDVLAA 180

Query: 4745 ---AKGKRVVDETIMANHLS---------EDENISAATCSREALDEMLAASIAAEEDGSF 4602
               +  ++++ + I+ N L+         E + +++ + S+E LDEMLAAS+A +ED + 
Sbjct: 181  LPQSMQRQLLKQKILLNDLNQSNKERSGTEHDAMTSTSYSQEKLDEMLAASLATQEDSNL 240

Query: 4601 SPDASTSGAGVHYXXXXXXXXEMILPAMHGNVDPAVLASLPPSMQLDLLVQMRERLMAEN 4422
            + +ASTS A +          EMILPAMHGNVDPAVLA+LPPS+QLDLL QMRERLMAEN
Sbjct: 241  A-NASTSVAAIPSEDDGDEDEEMILPAMHGNVDPAVLAALPPSLQLDLLGQMRERLMAEN 299

Query: 4421 RQRYQKVKKVPSRFSELQIQAYLKTVAFRREIDAVQKSAAGKGLGGMQTSRIASEANREF 4242
            RQ+YQKVKK P +FSELQIQ+YLKTVAFRREID VQ++AAG+G+ G+QTSRIASEANREF
Sbjct: 300  RQKYQKVKKAPEKFSELQIQSYLKTVAFRREIDEVQRAAAGRGVAGVQTSRIASEANREF 359

Query: 4241 IFSSSFTGDKQVLASGG-EVKTDARPTENSRVDVSSKAFNDIVSITRSNQTEECSRDTAG 4065
            IFSSSFTGDKQ L S   E+  D +   +S  D  S     + S  +SN   E   D + 
Sbjct: 360  IFSSSFTGDKQALTSARKEIDEDKQQERHS--DHPSGFLGSVKSSCKSNVAAESVPDEST 417

Query: 4064 TELPKGVETYVDERGRIRVSRGRAMGIRMTRDLQRNLELMKESEQVRVPSEEYVNNEXXX 3885
            +   + V TYVD  GRIRVSR R MGIRMTRDLQRNL+LMKE E+ R    + VN +   
Sbjct: 418  SAPDEDVGTYVDATGRIRVSRVRGMGIRMTRDLQRNLDLMKEIEKERTNLNKGVNVKSVP 477

Query: 3884 XXXXXXXXXXXXXXXXXPK---EGNEAMLHTSQSYEDPTLQGVASLEISFETNGEQKSGD 3714
                              +   + N   ++ ++S +    +  + +EI+FE +G+ +  D
Sbjct: 478  DKSKIDASKSVSNGNQFVETSHDDNGESVNVNESNQQSAFETESCMEITFEDDGKTEYFD 537

Query: 3713 DEDLFARLVAGETL-MNIPADSSPAEKPSDLEDISASDCEWEDGVIDGKSAVLNKQTVHE 3537
            D+D+FARL AGE + +  P + S  ++PS     S SD EWE+GV++GK   +      E
Sbjct: 538  DDDIFARLAAGEPVTLPSPEEKSLRKQPSG----SDSDFEWEEGVVEGKWDGVTPGMNAE 593

Query: 3536 LNSYLAHDDMEDDSGVEWEDGCASISKDVSPPPAECSESLSRGALEEEAEYQEAIRRSLV 3357
             N      ++ DDS VEWE+  +   K  S  P E    LS+G  EEE++ QEAIRRSL 
Sbjct: 594  HNLLNKESNITDDSEVEWEEEPSDAPKS-SSGPVESGRMLSKGYWEEESDLQEAIRRSLT 652

Query: 3356 DLKGSGDSNASCENLKSGDAGLIDNLGESSSIINEYSIPESSIPVKDNVKSCKSSFETQT 3177
            D+     ++   + ++S + G  +NL E    ++E     +S    D V     S E   
Sbjct: 653  DVGVEKSNSFPSDVIESKNLG--ENLDEDFGSLHEKGDTGASSFPGDAVNWQNKSCENLD 710

Query: 3176 NKMIDNQVKLDMPQHSNNSETQSTPRLGVDLVGLELSPGDAPGRCSNSVQDKTNDLRTQE 2997
                   V       + NS    +P    D     LS        S+S Q + N+     
Sbjct: 711  RPRKPCTVNEPSISETFNSPESPSPVHNSDKNMTILSKFSERSDGSHSEQSRHNETAEFV 770

Query: 2996 EIIERVKNCNPEKDILIQEQQGDIKS-SKVXXXXXXXXXXXXXXXTPYTLSGDLHTFTHV 2820
              +E+  +    K + + ++   + + S                  P T+  D  T +  
Sbjct: 771  ATLEKEVDFPTGKHLDVSKEVDGLSTISDSWFKDNSHSFDAAHGDIPDTIQVDKKTGSE- 829

Query: 2819 DEPHLELEAKVDDRLHESLISESSSFADVENKSDVENKSDFEPKSSPGH----------- 2673
            DEP              +L+S++ S  + E   D + K DFE K S              
Sbjct: 830  DEP-------------SNLVSDNKSSIEAEIL-DQDKKIDFEAKPSQQSVDTVNLSIPTV 875

Query: 2672 --------NVLHFEKEKYGG---------------NSSFIENMVEQVPXXXXXXXXXXXX 2562
                    + LH E+E  G                 S+   N  E++             
Sbjct: 876  QSSANKVISDLHIEQELSGDITYENCVNKAEQHTDMSTIKGNDNEEIKFSKASLDEELLI 935

Query: 2561 XXXXXXXLGNEQRRLERNAESVSGEMFAECQELLQMFGLPYIIAPMEAEAQCAFMELANL 2382
                   + +EQR+LERNAESVS EMFAECQELLQMFGLPYIIAPMEAEAQCA+MEL NL
Sbjct: 936  LDQECINMVDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNL 995

Query: 2381 VDGVVTDDSDAFLFGARSVYKNIFDDRKYVETYFMKDIESELGLDRDKLIRMALLLGSDY 2202
            VDGVVTDDSD FLFGARSVYKNIFDDRKYVETYFM+DIE ELGL R+KL+RMALLLGSDY
Sbjct: 996  VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDY 1055

Query: 2201 TEGISGIGIVNAIEVVNAFPEEDGLRQFRKWIESPDPSILGKFDVQEGCGSRKRGSKIRE 2022
            TEG+SGIGIVNAIEVVNAFPEEDGL +FR+WIESPDP+ILGK +VQEG  +RKRG K  E
Sbjct: 1056 TEGVSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTE 1115

Query: 2021 NEKNKHGGKLEGSS-------------DCDLNMXXXXXXXXXXKQIFMEKHRNVSKNWHI 1881
             + N       GS                D NM          KQIFM+KHRNVSKNWHI
Sbjct: 1116 KDVNGTKTSTRGSESNNGTSSLDQNSFQADKNM-QSTDCTDDIKQIFMDKHRNVSKNWHI 1174

Query: 1880 PSTFPSDVVIAAYASPQVDNSTDSFSWGRPDLVTLHKVCWEKFGWGSKKADEVLLPVLKE 1701
            PS+FPS+ VI+AY+ PQVD ST+ F+WGRPDL  L K+CWEKFGWGS+K+DE+LLPVL+E
Sbjct: 1175 PSSFPSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDELLLPVLRE 1234

Query: 1700 YDKHETQLRLEAFYTFNEKFAKIRSKRIKSALKGVRGNKSEDVMNDSGEGDSKNRKRRKA 1521
             +K ETQLR+EAFYTFNE+FAKIRSKRIK A+KG+ GN+S ++++D  +  SK+R++R+A
Sbjct: 1235 SEKRETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVSKSRRKRRA 1294

Query: 1520 NYVEAKTNEVEKDSGLRDH--GVIKQKIAKILKPKQSRGRNSQGEAVEGIDTQPSEEASM 1347
            + V++  ++  + S  ++      + K      PK SR R S G+ V   + +  E    
Sbjct: 1295 SPVQSGDDKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDV-SFEMRTPEPQLQ 1353

Query: 1346 TXXXXXXXXXXXXXXXXXXXXXRKKNKINSCLEDVGTSSD-GEFNNETEERAPWEFERPS 1170
            T                      ++ K +S  +   TSS  G+  N  +E    + ++P 
Sbjct: 1354 TLRRRETNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQEVDGEKLDQPR 1413

Query: 1169 KVRRSERPRKAVNYTISNEDILEECCATTSKLDGFETSHNKVIGNSLSGKXXXXXXXXXX 990
            +VRRS   R  VNYT+ +   LE+    + K    E +  K  G  +  K          
Sbjct: 1414 EVRRSMHTRNPVNYTVKD---LEDEGGLSHKESSGEDAMEKEAGEDV--KEKIQCEAREP 1468

Query: 989  XXXXXXEDFLESGGGFCSEVTEPSQANLGDIGNAV-VEDQLSEGYLKMGGGFCLEDDAAR 813
                   D+LE+GGGFC    +    +L D    V +E + +  YLKMGGGF +E D  +
Sbjct: 1469 SLDNIYGDYLETGGGFC---MDERGTDLPDANQDVDLETEPTNDYLKMGGGFYMEGDIDQ 1525

Query: 812  GNTDEYPGKAAESSQVNSRSDGDPLAEDHISEEYLKIGGGFCLDDDEAADGNRD 651
             +T +               D +P +E   + +YLK+GGGFC+++ E   GN D
Sbjct: 1526 PDTSQ---------------DVNPFSETGSANDYLKMGGGFCMEESETI-GNPD 1563


>XP_016749880.1 PREDICTED: DNA repair protein UVH3-like isoform X2 [Gossypium
            hirsutum]
          Length = 1698

 Score =  906 bits (2341), Expect = 0.0
 Identities = 592/1405 (42%), Positives = 793/1405 (56%), Gaps = 56/1405 (3%)
 Frame = -1

Query: 4697 SEDENISAATCSREALDEMLAASIAAEEDGSFSPDASTSGAGVHYXXXXXXXXEMILPAM 4518
            +E + +++ + S+E LDEMLAAS+A +ED + + +ASTS A +          EMILPAM
Sbjct: 240  TEHDAMTSTSYSQEKLDEMLAASLATQEDSNLA-NASTSVAAIPSEDDGDEDEEMILPAM 298

Query: 4517 HGNVDPAVLASLPPSMQLDLLVQMRERLMAENRQRYQKVKKVPSRFSELQIQAYLKTVAF 4338
            HGNVDPAVLA+LPPS+QLDLL QMRERLMAENRQ+YQKVKK P +FSELQIQ+YLKTVAF
Sbjct: 299  HGNVDPAVLAALPPSLQLDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSYLKTVAF 358

Query: 4337 RREIDAVQKSAAGKGLGGMQTSRIASEANREFIFSSSFTGDKQVLASGG-EVKTDARPTE 4161
            RREID VQ++AAG+G+ G+QTSRIASEANREFIFSSSFTGDKQ L S   E+  D +P  
Sbjct: 359  RREIDEVQRAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQALTSARKEIDEDKQPER 418

Query: 4160 NSRVDVSSKAFNDIVSITRSNQTEECSRDTAGTELPKGVETYVDERGRIRVSRGRAMGIR 3981
            +S  D  S     + S  +SN   E   D + +   + V TYVD  GRIRVSR R MGIR
Sbjct: 419  HS--DHPSGFLGSVKSSCKSNVAAESVPDESTSAPDEDVGTYVDATGRIRVSRVRGMGIR 476

Query: 3980 MTRDLQRNLELMKESEQVRVPSEEYVNNEXXXXXXXXXXXXXXXXXXXXPK---EGNEAM 3810
            MTRDLQRNL+LMKE E+ R    + VN +                     +   + N   
Sbjct: 477  MTRDLQRNLDLMKEIEKERTNLNKGVNVQSVPDKSKIDASKSVSNGNQFVETSHDDNGES 536

Query: 3809 LHTSQSYEDPTLQGVASLEISFETNGEQKSGDDEDLFARLVAGETL-MNIPADSSPAEKP 3633
            ++ ++S +    +  + +EI+FE +G+ +  DD+D+FARL AGE + +  P + S  ++P
Sbjct: 537  VNVNESNQQSAFETESCMEITFEDDGKTEYFDDDDIFARLAAGEPVTLPSPEEKSLRKQP 596

Query: 3632 SDLEDISASDCEWEDGVIDGKSAVLNKQTVHELNSYLAHDDMEDDSGVEWEDGCASISKD 3453
            S     S SD EWE+GV++GK   +      E N      ++ DDS VEWE+  +   K 
Sbjct: 597  SG----SDSDFEWEEGVVEGKWDGVTPGMNAEHNLLNKESNITDDSEVEWEEEPSDAPKS 652

Query: 3452 VSPPPAECSESLSRGALEEEAEYQEAIRRSLVDLKGSGDSNASCENLKSGDAGLIDNLGE 3273
             S  P E    LS+G  EEE++ QEAIRRSL D+     ++   + ++S + G  +NL E
Sbjct: 653  -SSGPVESGRMLSKGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESKNLG--ENLDE 709

Query: 3272 SSSIINEYSIPESSIPVKDNVKSCKSSFETQTNKMIDNQVKLDMPQHSNNSETQSTPRLG 3093
                ++E     +S    D V     S E          V       + NS    +P   
Sbjct: 710  DFGSLHEKGDTGASSFPGDAVNWQNKSCENLDRPRKPCTVNEPSISETFNSPESPSPVHN 769

Query: 3092 VDLVGLELSPGDAPGRCSNSVQDKTNDLRTQEEIIERVKNCNPEKDILIQEQQGDIKS-S 2916
             D     LS        S+S Q + ++       +E+  +    K + + ++   + + S
Sbjct: 770  SDKNMTILSKFSERSDGSHSEQSRHHETAEFVATLEKEVDFPTGKHLDVSKEVDGLSTIS 829

Query: 2915 KVXXXXXXXXXXXXXXXTPYTLSGDLHTFTHVDEPHLELEAKVDDRLHESLISESSSFAD 2736
                              P T+  D  T +  DEP              +L+S++ S  +
Sbjct: 830  DSWFKDNSHSFDAARGDIPDTIQVDKKTGSE-DEP-------------SNLVSDNKSSIE 875

Query: 2735 VENKSDVENKSDFEPKSSPGH-------------------NVLHFEKEKYGG-------- 2637
             E   D + K DFE K S                      + LH E+E  G         
Sbjct: 876  AEIL-DQDKKIDFEAKPSQQSVDTVNLSIPTVQSSANKVISDLHIEQELSGDITYENCVD 934

Query: 2636 -------NSSFIENMVEQVPXXXXXXXXXXXXXXXXXXXLGNEQRRLERNAESVSGEMFA 2478
                    S+   N  E++                    + +EQR+LERNAESVS EMFA
Sbjct: 935  KAEQHTDMSTIKGNDNEEIKFSKASLDEELLILDQECINMVDEQRKLERNAESVSSEMFA 994

Query: 2477 ECQELLQMFGLPYIIAPMEAEAQCAFMELANLVDGVVTDDSDAFLFGARSVYKNIFDDRK 2298
            ECQELLQMFGLPYIIAPMEAEAQCA+MEL NLVDGVVTDDSD FLFGARS+YKNIFDDRK
Sbjct: 995  ECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDVFLFGARSIYKNIFDDRK 1054

Query: 2297 YVETYFMKDIESELGLDRDKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLRQF 2118
            YVETYFM+DIE ELGL R+KL+RMALLLGSDYTEG+SGIGIVNAIEVVNAF EEDGL +F
Sbjct: 1055 YVETYFMQDIEKELGLTREKLMRMALLLGSDYTEGVSGIGIVNAIEVVNAFSEEDGLHKF 1114

Query: 2117 RKWIESPDPSILGKFDVQEGCGSRKRGSKIRENEKN-----KHGGKL-EGSSDCDLNM-- 1962
            R+WIESPDP+ILGK +VQEG  +RKRG K  E + N     + G +   G+S  D N   
Sbjct: 1115 REWIESPDPTILGKLNVQEGSSARKRGPKSTEKDVNGTKTSRRGSESNNGTSSLDQNSFQ 1174

Query: 1961 ----XXXXXXXXXXKQIFMEKHRNVSKNWHIPSTFPSDVVIAAYASPQVDNSTDSFSWGR 1794
                          KQIFM+KHRNVSKNWHIPS+FPS+ VI+AY+ PQVD ST+ F+WGR
Sbjct: 1175 ADKNMQSTDCTDDIKQIFMDKHRNVSKNWHIPSSFPSEAVISAYSLPQVDKSTEPFTWGR 1234

Query: 1793 PDLVTLHKVCWEKFGWGSKKADEVLLPVLKEYDKHETQLRLEAFYTFNEKFAKIRSKRIK 1614
            PDL  L K+CWEKFGWGS+K+DE+LLPVL+EY+K ETQLR+EAFYTFNE+FAKIRSKRIK
Sbjct: 1235 PDLFVLRKLCWEKFGWGSQKSDELLLPVLREYEKRETQLRMEAFYTFNERFAKIRSKRIK 1294

Query: 1613 SALKGVRGNKSEDVMNDSGEGDSKNRKRRKANYVEAKTNEVEKDSGLRDH--GVIKQKIA 1440
             A+KG+ GN+S +++++  +  SK+R++R+A+ V++  ++  + S  ++      + K  
Sbjct: 1295 KAVKGITGNQSSELIDEGMQQVSKSRRKRRASPVQSGDDKSGEPSNKKEDIASRCQSKST 1354

Query: 1439 KILKPKQSRGRNSQGEAVEGIDTQPSEEASMTXXXXXXXXXXXXXXXXXXXXXRKKNKIN 1260
                PK SR R + G+ V   + +  E    T                      ++ K +
Sbjct: 1355 DKSVPKTSRKRQNSGKDV-SFEMRTPEPQLQTLRGRKTNKQSAGNGRGRGGGEGRRRKGS 1413

Query: 1259 SCLEDVGTSSD-GEFNNETEERAPWEFERPSKVRRSERPRKAVNYTISNEDILEECCATT 1083
            S  +   TSS  G+  N+ +E    + ++P +VRRS R R  VNYT+ +   LE+    +
Sbjct: 1414 SGFQQFETSSSGGDSGNDNQEVDGEKLDQPREVRRSMRTRNPVNYTVKD---LEDEGGLS 1470

Query: 1082 SKLDGFETSHNKVIGNSLSGKXXXXXXXXXXXXXXXXEDFLESGGGFCSEVTEPSQANLG 903
             K    E +  K  G  +  K                 D+LE+GGGFC    +    +L 
Sbjct: 1471 HKESSGEDAMEKEAGEDV--KEKIQCEAREPSLDNIYGDYLETGGGFC---MDERGTDLP 1525

Query: 902  DIGNAV-VEDQLSEGYLKMGGGFCLEDDAARGNTDEYPGKAAESSQVNSRSDGDPLAEDH 726
            D    V +E + +  YLKMGGGFC+E D  + +T +               D +P +E  
Sbjct: 1526 DANQDVDLETEPTNDYLKMGGGFCMEGDIDQPDTSQ---------------DVNPFSETG 1570

Query: 725  ISEEYLKIGGGFCLDDDEAADGNRD 651
             + +YLK+GGGFC+++ E   GN D
Sbjct: 1571 SANDYLKMGGGFCMEESETI-GNPD 1594



 Score =  255 bits (652), Expect = 8e-65
 Identities = 152/263 (57%), Positives = 173/263 (65%), Gaps = 5/263 (1%)
 Frame = -1

Query: 5186 MGVHNLWELLAPVGRRVSVETLAGKKLAIDASIWMIQFMKAMRDEKGEMIRNAHLVGFFR 5007
            MGVH LWELLAPVGRRVSVETLAGKKLAIDASIWM+QFMKAMRDEKGEMIRNAHL+GFFR
Sbjct: 1    MGVHGLWELLAPVGRRVSVETLAGKKLAIDASIWMVQFMKAMRDEKGEMIRNAHLLGFFR 60

Query: 5006 RICKLLFLRVKPVFVFDGATPALKRRTVIARRRQRENAQTKIRKTAEKLLLNQLKAMRLK 4827
            RICKLL+L+ KPVFVFDGATP LKRRTVIARRRQRENAQ KIRKTAEKLLLNQLK MRLK
Sbjct: 61   RICKLLYLKTKPVFVFDGATPILKRRTVIARRRQRENAQAKIRKTAEKLLLNQLKQMRLK 120

Query: 4826 ELQKNLQEQRQ----QDDSEPKMVSSKIIENAKGKRVVDETIMANHLSEDENISAATCSR 4659
            EL K+L  QR+     +  + KMVSS            D     N +  + N+       
Sbjct: 121  ELAKDLDNQRKMQKNNNKDKRKMVSS------------DNQSDTNFVGCNANVELTKEGD 168

Query: 4658 EALDEMLAASIAAEEDGSFSPDASTSGAGVHYXXXXXXXXEMILPAMHGNVDPAVLASLP 4479
              L E L    +  +DG  + D                   +ILP + GN+DP VLA+LP
Sbjct: 169  VKLKEKLEVP-SIGKDGGHNEDEDED-------------EVIILPDIDGNIDPDVLAALP 214

Query: 4478 PSMQLDLLVQ-MRERLMAENRQR 4413
             SMQ  LL Q +   L   N++R
Sbjct: 215  QSMQRQLLKQILLNDLNQSNKER 237


>XP_016749879.1 PREDICTED: DNA repair protein UVH3-like isoform X1 [Gossypium
            hirsutum]
          Length = 1701

 Score =  906 bits (2341), Expect = 0.0
 Identities = 592/1405 (42%), Positives = 793/1405 (56%), Gaps = 56/1405 (3%)
 Frame = -1

Query: 4697 SEDENISAATCSREALDEMLAASIAAEEDGSFSPDASTSGAGVHYXXXXXXXXEMILPAM 4518
            +E + +++ + S+E LDEMLAAS+A +ED + + +ASTS A +          EMILPAM
Sbjct: 243  TEHDAMTSTSYSQEKLDEMLAASLATQEDSNLA-NASTSVAAIPSEDDGDEDEEMILPAM 301

Query: 4517 HGNVDPAVLASLPPSMQLDLLVQMRERLMAENRQRYQKVKKVPSRFSELQIQAYLKTVAF 4338
            HGNVDPAVLA+LPPS+QLDLL QMRERLMAENRQ+YQKVKK P +FSELQIQ+YLKTVAF
Sbjct: 302  HGNVDPAVLAALPPSLQLDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSYLKTVAF 361

Query: 4337 RREIDAVQKSAAGKGLGGMQTSRIASEANREFIFSSSFTGDKQVLASGG-EVKTDARPTE 4161
            RREID VQ++AAG+G+ G+QTSRIASEANREFIFSSSFTGDKQ L S   E+  D +P  
Sbjct: 362  RREIDEVQRAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQALTSARKEIDEDKQPER 421

Query: 4160 NSRVDVSSKAFNDIVSITRSNQTEECSRDTAGTELPKGVETYVDERGRIRVSRGRAMGIR 3981
            +S  D  S     + S  +SN   E   D + +   + V TYVD  GRIRVSR R MGIR
Sbjct: 422  HS--DHPSGFLGSVKSSCKSNVAAESVPDESTSAPDEDVGTYVDATGRIRVSRVRGMGIR 479

Query: 3980 MTRDLQRNLELMKESEQVRVPSEEYVNNEXXXXXXXXXXXXXXXXXXXXPK---EGNEAM 3810
            MTRDLQRNL+LMKE E+ R    + VN +                     +   + N   
Sbjct: 480  MTRDLQRNLDLMKEIEKERTNLNKGVNVQSVPDKSKIDASKSVSNGNQFVETSHDDNGES 539

Query: 3809 LHTSQSYEDPTLQGVASLEISFETNGEQKSGDDEDLFARLVAGETL-MNIPADSSPAEKP 3633
            ++ ++S +    +  + +EI+FE +G+ +  DD+D+FARL AGE + +  P + S  ++P
Sbjct: 540  VNVNESNQQSAFETESCMEITFEDDGKTEYFDDDDIFARLAAGEPVTLPSPEEKSLRKQP 599

Query: 3632 SDLEDISASDCEWEDGVIDGKSAVLNKQTVHELNSYLAHDDMEDDSGVEWEDGCASISKD 3453
            S     S SD EWE+GV++GK   +      E N      ++ DDS VEWE+  +   K 
Sbjct: 600  SG----SDSDFEWEEGVVEGKWDGVTPGMNAEHNLLNKESNITDDSEVEWEEEPSDAPKS 655

Query: 3452 VSPPPAECSESLSRGALEEEAEYQEAIRRSLVDLKGSGDSNASCENLKSGDAGLIDNLGE 3273
             S  P E    LS+G  EEE++ QEAIRRSL D+     ++   + ++S + G  +NL E
Sbjct: 656  -SSGPVESGRMLSKGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESKNLG--ENLDE 712

Query: 3272 SSSIINEYSIPESSIPVKDNVKSCKSSFETQTNKMIDNQVKLDMPQHSNNSETQSTPRLG 3093
                ++E     +S    D V     S E          V       + NS    +P   
Sbjct: 713  DFGSLHEKGDTGASSFPGDAVNWQNKSCENLDRPRKPCTVNEPSISETFNSPESPSPVHN 772

Query: 3092 VDLVGLELSPGDAPGRCSNSVQDKTNDLRTQEEIIERVKNCNPEKDILIQEQQGDIKS-S 2916
             D     LS        S+S Q + ++       +E+  +    K + + ++   + + S
Sbjct: 773  SDKNMTILSKFSERSDGSHSEQSRHHETAEFVATLEKEVDFPTGKHLDVSKEVDGLSTIS 832

Query: 2915 KVXXXXXXXXXXXXXXXTPYTLSGDLHTFTHVDEPHLELEAKVDDRLHESLISESSSFAD 2736
                              P T+  D  T +  DEP              +L+S++ S  +
Sbjct: 833  DSWFKDNSHSFDAARGDIPDTIQVDKKTGSE-DEP-------------SNLVSDNKSSIE 878

Query: 2735 VENKSDVENKSDFEPKSSPGH-------------------NVLHFEKEKYGG-------- 2637
             E   D + K DFE K S                      + LH E+E  G         
Sbjct: 879  AEIL-DQDKKIDFEAKPSQQSVDTVNLSIPTVQSSANKVISDLHIEQELSGDITYENCVD 937

Query: 2636 -------NSSFIENMVEQVPXXXXXXXXXXXXXXXXXXXLGNEQRRLERNAESVSGEMFA 2478
                    S+   N  E++                    + +EQR+LERNAESVS EMFA
Sbjct: 938  KAEQHTDMSTIKGNDNEEIKFSKASLDEELLILDQECINMVDEQRKLERNAESVSSEMFA 997

Query: 2477 ECQELLQMFGLPYIIAPMEAEAQCAFMELANLVDGVVTDDSDAFLFGARSVYKNIFDDRK 2298
            ECQELLQMFGLPYIIAPMEAEAQCA+MEL NLVDGVVTDDSD FLFGARS+YKNIFDDRK
Sbjct: 998  ECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDVFLFGARSIYKNIFDDRK 1057

Query: 2297 YVETYFMKDIESELGLDRDKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLRQF 2118
            YVETYFM+DIE ELGL R+KL+RMALLLGSDYTEG+SGIGIVNAIEVVNAF EEDGL +F
Sbjct: 1058 YVETYFMQDIEKELGLTREKLMRMALLLGSDYTEGVSGIGIVNAIEVVNAFSEEDGLHKF 1117

Query: 2117 RKWIESPDPSILGKFDVQEGCGSRKRGSKIRENEKN-----KHGGKL-EGSSDCDLNM-- 1962
            R+WIESPDP+ILGK +VQEG  +RKRG K  E + N     + G +   G+S  D N   
Sbjct: 1118 REWIESPDPTILGKLNVQEGSSARKRGPKSTEKDVNGTKTSRRGSESNNGTSSLDQNSFQ 1177

Query: 1961 ----XXXXXXXXXXKQIFMEKHRNVSKNWHIPSTFPSDVVIAAYASPQVDNSTDSFSWGR 1794
                          KQIFM+KHRNVSKNWHIPS+FPS+ VI+AY+ PQVD ST+ F+WGR
Sbjct: 1178 ADKNMQSTDCTDDIKQIFMDKHRNVSKNWHIPSSFPSEAVISAYSLPQVDKSTEPFTWGR 1237

Query: 1793 PDLVTLHKVCWEKFGWGSKKADEVLLPVLKEYDKHETQLRLEAFYTFNEKFAKIRSKRIK 1614
            PDL  L K+CWEKFGWGS+K+DE+LLPVL+EY+K ETQLR+EAFYTFNE+FAKIRSKRIK
Sbjct: 1238 PDLFVLRKLCWEKFGWGSQKSDELLLPVLREYEKRETQLRMEAFYTFNERFAKIRSKRIK 1297

Query: 1613 SALKGVRGNKSEDVMNDSGEGDSKNRKRRKANYVEAKTNEVEKDSGLRDH--GVIKQKIA 1440
             A+KG+ GN+S +++++  +  SK+R++R+A+ V++  ++  + S  ++      + K  
Sbjct: 1298 KAVKGITGNQSSELIDEGMQQVSKSRRKRRASPVQSGDDKSGEPSNKKEDIASRCQSKST 1357

Query: 1439 KILKPKQSRGRNSQGEAVEGIDTQPSEEASMTXXXXXXXXXXXXXXXXXXXXXRKKNKIN 1260
                PK SR R + G+ V   + +  E    T                      ++ K +
Sbjct: 1358 DKSVPKTSRKRQNSGKDV-SFEMRTPEPQLQTLRGRKTNKQSAGNGRGRGGGEGRRRKGS 1416

Query: 1259 SCLEDVGTSSD-GEFNNETEERAPWEFERPSKVRRSERPRKAVNYTISNEDILEECCATT 1083
            S  +   TSS  G+  N+ +E    + ++P +VRRS R R  VNYT+ +   LE+    +
Sbjct: 1417 SGFQQFETSSSGGDSGNDNQEVDGEKLDQPREVRRSMRTRNPVNYTVKD---LEDEGGLS 1473

Query: 1082 SKLDGFETSHNKVIGNSLSGKXXXXXXXXXXXXXXXXEDFLESGGGFCSEVTEPSQANLG 903
             K    E +  K  G  +  K                 D+LE+GGGFC    +    +L 
Sbjct: 1474 HKESSGEDAMEKEAGEDV--KEKIQCEAREPSLDNIYGDYLETGGGFC---MDERGTDLP 1528

Query: 902  DIGNAV-VEDQLSEGYLKMGGGFCLEDDAARGNTDEYPGKAAESSQVNSRSDGDPLAEDH 726
            D    V +E + +  YLKMGGGFC+E D  + +T +               D +P +E  
Sbjct: 1529 DANQDVDLETEPTNDYLKMGGGFCMEGDIDQPDTSQ---------------DVNPFSETG 1573

Query: 725  ISEEYLKIGGGFCLDDDEAADGNRD 651
             + +YLK+GGGFC+++ E   GN D
Sbjct: 1574 SANDYLKMGGGFCMEESETI-GNPD 1597



 Score =  256 bits (655), Expect = 4e-65
 Identities = 151/261 (57%), Positives = 173/261 (66%), Gaps = 4/261 (1%)
 Frame = -1

Query: 5186 MGVHNLWELLAPVGRRVSVETLAGKKLAIDASIWMIQFMKAMRDEKGEMIRNAHLVGFFR 5007
            MGVH LWELLAPVGRRVSVETLAGKKLAIDASIWM+QFMKAMRDEKGEMIRNAHL+GFFR
Sbjct: 1    MGVHGLWELLAPVGRRVSVETLAGKKLAIDASIWMVQFMKAMRDEKGEMIRNAHLLGFFR 60

Query: 5006 RICKLLFLRVKPVFVFDGATPALKRRTVIARRRQRENAQTKIRKTAEKLLLNQLKAMRLK 4827
            RICKLL+L+ KPVFVFDGATP LKRRTVIARRRQRENAQ KIRKTAEKLLLNQLK MRLK
Sbjct: 61   RICKLLYLKTKPVFVFDGATPILKRRTVIARRRQRENAQAKIRKTAEKLLLNQLKQMRLK 120

Query: 4826 ELQKNLQEQRQ----QDDSEPKMVSSKIIENAKGKRVVDETIMANHLSEDENISAATCSR 4659
            EL K+L  QR+     +  + KMVSS            D     N +  + N+       
Sbjct: 121  ELAKDLDNQRKMQKNNNKDKRKMVSS------------DNQSDTNFVGCNANVELTKEGD 168

Query: 4658 EALDEMLAASIAAEEDGSFSPDASTSGAGVHYXXXXXXXXEMILPAMHGNVDPAVLASLP 4479
              L E L    +  +DG  + D                   +ILP + GN+DP VLA+LP
Sbjct: 169  VKLKEKLEVP-SIGKDGGHNEDEDED-------------EVIILPDIDGNIDPDVLAALP 214

Query: 4478 PSMQLDLLVQMRERLMAENRQ 4416
             SMQ  LL Q ++ L+ +  Q
Sbjct: 215  QSMQRQLLKQGKKILLNDLNQ 235


>XP_012444053.1 PREDICTED: DNA repair protein UVH3 isoform X4 [Gossypium raimondii]
          Length = 1591

 Score =  902 bits (2330), Expect = 0.0
 Identities = 597/1427 (41%), Positives = 797/1427 (55%), Gaps = 61/1427 (4%)
 Frame = -1

Query: 4748 NAKGKRVVDETIMANHL----SEDENISAATCSREALDEMLAASIAAEEDGSFSPDASTS 4581
            +AKGK+++   +  ++     +E + +++ + S+E LDEMLAAS+A +ED + + +ASTS
Sbjct: 112  DAKGKKILLNDLNQSNKERSGTEHDAMTSTSYSQEKLDEMLAASLATQEDSNLA-NASTS 170

Query: 4580 GAGVHYXXXXXXXXEMILPAMHGNVDPAVLASLPPSMQLDLLVQMRERLMAENRQRYQKV 4401
             A +          EMILPAMHGNVDPAVLA+LPPS+QLDLL QMRERLMAENRQ+YQKV
Sbjct: 171  VAAIPSEDDGDEDEEMILPAMHGNVDPAVLAALPPSLQLDLLGQMRERLMAENRQKYQKV 230

Query: 4400 KKVPSRFSELQIQAYLKTVAFRREIDAVQKSAAGKGLGGMQTSRIASEANREFIFSSSFT 4221
            KK P +FSELQIQ+YLKTVAFRREID VQ++AAG+G+ G+QTSRIASEANREFIFSSSFT
Sbjct: 231  KKAPEKFSELQIQSYLKTVAFRREIDEVQRAAAGRGVAGVQTSRIASEANREFIFSSSFT 290

Query: 4220 GDKQVLASGG-EVKTDARPTENSRVDVSSKAFNDIVSITRSNQTEECSRDTAGTELPKGV 4044
            GDKQ L S   E+  D +   +S  D  S     + S  +SN   E   D + +   + V
Sbjct: 291  GDKQALTSARKEIDEDKQQERHS--DHPSGFLGSVKSSCKSNVAAESVPDESTSAPDEDV 348

Query: 4043 ETYVDERGRIRVSRGRAMGIRMTRDLQRNLELMKESEQVRVPSEEYVNNEXXXXXXXXXX 3864
             TYVD  GRIRVSR R MGIRMTRDLQRNL+LMKE E+ R    + VN +          
Sbjct: 349  GTYVDATGRIRVSRVRGMGIRMTRDLQRNLDLMKEIEKERTNLNKGVNVKSVPDKSKIDA 408

Query: 3863 XXXXXXXXXXPK---EGNEAMLHTSQSYEDPTLQGVASLEISFETNGEQKSGDDEDLFAR 3693
                       +   + N   ++ ++S +    +  + +EI+FE +G+ +  DD+D+FAR
Sbjct: 409  SKSVSNGNQFVETSHDDNGESVNVNESNQQSAFETESCMEITFEDDGKTEYFDDDDIFAR 468

Query: 3692 LVAGETL-MNIPADSSPAEKPSDLEDISASDCEWEDGVIDGKSAVLNKQTVHELNSYLAH 3516
            L AGE + +  P + S  ++PS     S SD EWE+GV++GK   +      E N     
Sbjct: 469  LAAGEPVTLPSPEEKSLRKQPSG----SDSDFEWEEGVVEGKWDGVTPGMNAEHNLLNKE 524

Query: 3515 DDMEDDSGVEWEDGCASISKDVSPPPAECSESLSRGALEEEAEYQEAIRRSLVDLKGSGD 3336
             ++ DDS VEWE+  +   K  S  P E    LS+G  EEE++ QEAIRRSL D+     
Sbjct: 525  SNITDDSEVEWEEEPSDAPKS-SSGPVESGRMLSKGYWEEESDLQEAIRRSLTDVGVEKS 583

Query: 3335 SNASCENLKSGDAGLIDNLGESSSIINEYSIPESSIPVKDNVKSCKSSFETQTNKMIDNQ 3156
            ++   + ++S + G  +NL E    ++E     +S    D V     S E          
Sbjct: 584  NSFPSDVIESKNLG--ENLDEDFGSLHEKGDTGASSFPGDAVNWQNKSCENLDRPRKPCT 641

Query: 3155 VKLDMPQHSNNSETQSTPRLGVDLVGLELSPGDAPGRCSNSVQDKTNDLRTQEEIIERVK 2976
            V       + NS    +P    D     LS        S+S Q + N+       +E+  
Sbjct: 642  VNEPSISETFNSPESPSPVHNSDKNMTILSKFSERSDGSHSEQSRHNETAEFVATLEKEV 701

Query: 2975 NCNPEKDILIQEQQGDIKS-SKVXXXXXXXXXXXXXXXTPYTLSGDLHTFTHVDEPHLEL 2799
            +    K + + ++   + + S                  P T+  D  T +  DEP    
Sbjct: 702  DFPTGKHLDVSKEVDGLSTISDSWFKDNSHSFDAAHGDIPDTIQVDKKTGSE-DEP---- 756

Query: 2798 EAKVDDRLHESLISESSSFADVENKSDVENKSDFEPKSSPGH------------------ 2673
                      +L+S++ S  + E   D + K DFE K S                     
Sbjct: 757  ---------SNLVSDNKSSIEAEIL-DQDKKIDFEAKPSQQSVDTVNLSIPTVQSSANKV 806

Query: 2672 -NVLHFEKEKYGG---------------NSSFIENMVEQVPXXXXXXXXXXXXXXXXXXX 2541
             + LH E+E  G                 S+   N  E++                    
Sbjct: 807  ISDLHIEQELSGDITYENCVNKAEQHTDMSTIKGNDNEEIKFSKASLDEELLILDQECIN 866

Query: 2540 LGNEQRRLERNAESVSGEMFAECQELLQMFGLPYIIAPMEAEAQCAFMELANLVDGVVTD 2361
            + +EQR+LERNAESVS EMFAECQELLQMFGLPYIIAPMEAEAQCA+MEL NLVDGVVTD
Sbjct: 867  MVDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTD 926

Query: 2360 DSDAFLFGARSVYKNIFDDRKYVETYFMKDIESELGLDRDKLIRMALLLGSDYTEGISGI 2181
            DSD FLFGARSVYKNIFDDRKYVETYFM+DIE ELGL R+KL+RMALLLGSDYTEG+SGI
Sbjct: 927  DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTEGVSGI 986

Query: 2180 GIVNAIEVVNAFPEEDGLRQFRKWIESPDPSILGKFDVQEGCGSRKRGSKIRENEKNKHG 2001
            GIVNAIEVVNAFPEEDGL +FR+WIESPDP+ILGK +VQEG  +RKRG K  E + N   
Sbjct: 987  GIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKDVNGTK 1046

Query: 2000 GKLEGSS-------------DCDLNMXXXXXXXXXXKQIFMEKHRNVSKNWHIPSTFPSD 1860
                GS                D NM          KQIFM+KHRNVSKNWHIPS+FPS+
Sbjct: 1047 TSTRGSESNNGTSSLDQNSFQADKNM-QSTDCTDDIKQIFMDKHRNVSKNWHIPSSFPSE 1105

Query: 1859 VVIAAYASPQVDNSTDSFSWGRPDLVTLHKVCWEKFGWGSKKADEVLLPVLKEYDKHETQ 1680
             VI+AY+ PQVD ST+ F+WGRPDL  L K+CWEKFGWGS+K+DE+LLPVL+E +K ETQ
Sbjct: 1106 AVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDELLLPVLRESEKRETQ 1165

Query: 1679 LRLEAFYTFNEKFAKIRSKRIKSALKGVRGNKSEDVMNDSGEGDSKNRKRRKANYVEAKT 1500
            LR+EAFYTFNE+FAKIRSKRIK A+KG+ GN+S ++++D  +  SK+R++R+A+ V++  
Sbjct: 1166 LRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVSKSRRKRRASPVQSGD 1225

Query: 1499 NEVEKDSGLRDH--GVIKQKIAKILKPKQSRGRNSQGEAVEGIDTQPSEEASMTXXXXXX 1326
            ++  + S  ++      + K      PK SR R S G+ V   + +  E    T      
Sbjct: 1226 DKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDV-SFEMRTPEPQLQTLRRRET 1284

Query: 1325 XXXXXXXXXXXXXXXRKKNKINSCLEDVGTSSD-GEFNNETEERAPWEFERPSKVRRSER 1149
                            ++ K +S  +   TSS  G+  N  +E    + ++P +VRRS  
Sbjct: 1285 NKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQEVDGEKLDQPREVRRSMH 1344

Query: 1148 PRKAVNYTISNEDILEECCATTSKLDGFETSHNKVIGNSLSGKXXXXXXXXXXXXXXXXE 969
             R  VNYT+ +   LE+    + K    E +  K  G  +  K                 
Sbjct: 1345 TRNPVNYTVKD---LEDEGGLSHKESSGEDAMEKEAGEDV--KEKIQCEAREPSLDNIYG 1399

Query: 968  DFLESGGGFCSEVTEPSQANLGDIGNAV-VEDQLSEGYLKMGGGFCLEDDAARGNTDEYP 792
            D+LE+GGGFC    +    +L D    V +E + +  YLKMGGGF +E D  + +T +  
Sbjct: 1400 DYLETGGGFC---MDERGTDLPDANQDVDLETEPTNDYLKMGGGFYMEGDIDQPDTSQ-- 1454

Query: 791  GKAAESSQVNSRSDGDPLAEDHISEEYLKIGGGFCLDDDEAADGNRD 651
                         D +P +E   + +YLK+GGGFC+++ E   GN D
Sbjct: 1455 -------------DVNPFSETGSANDYLKMGGGFCMEESETI-GNPD 1487


>XP_012444035.1 PREDICTED: DNA repair protein UVH3 isoform X2 [Gossypium raimondii]
          Length = 1707

 Score =  902 bits (2330), Expect = 0.0
 Identities = 597/1427 (41%), Positives = 797/1427 (55%), Gaps = 61/1427 (4%)
 Frame = -1

Query: 4748 NAKGKRVVDETIMANHL----SEDENISAATCSREALDEMLAASIAAEEDGSFSPDASTS 4581
            +AKGK+++   +  ++     +E + +++ + S+E LDEMLAAS+A +ED + + +ASTS
Sbjct: 228  DAKGKKILLNDLNQSNKERSGTEHDAMTSTSYSQEKLDEMLAASLATQEDSNLA-NASTS 286

Query: 4580 GAGVHYXXXXXXXXEMILPAMHGNVDPAVLASLPPSMQLDLLVQMRERLMAENRQRYQKV 4401
             A +          EMILPAMHGNVDPAVLA+LPPS+QLDLL QMRERLMAENRQ+YQKV
Sbjct: 287  VAAIPSEDDGDEDEEMILPAMHGNVDPAVLAALPPSLQLDLLGQMRERLMAENRQKYQKV 346

Query: 4400 KKVPSRFSELQIQAYLKTVAFRREIDAVQKSAAGKGLGGMQTSRIASEANREFIFSSSFT 4221
            KK P +FSELQIQ+YLKTVAFRREID VQ++AAG+G+ G+QTSRIASEANREFIFSSSFT
Sbjct: 347  KKAPEKFSELQIQSYLKTVAFRREIDEVQRAAAGRGVAGVQTSRIASEANREFIFSSSFT 406

Query: 4220 GDKQVLASGG-EVKTDARPTENSRVDVSSKAFNDIVSITRSNQTEECSRDTAGTELPKGV 4044
            GDKQ L S   E+  D +   +S  D  S     + S  +SN   E   D + +   + V
Sbjct: 407  GDKQALTSARKEIDEDKQQERHS--DHPSGFLGSVKSSCKSNVAAESVPDESTSAPDEDV 464

Query: 4043 ETYVDERGRIRVSRGRAMGIRMTRDLQRNLELMKESEQVRVPSEEYVNNEXXXXXXXXXX 3864
             TYVD  GRIRVSR R MGIRMTRDLQRNL+LMKE E+ R    + VN +          
Sbjct: 465  GTYVDATGRIRVSRVRGMGIRMTRDLQRNLDLMKEIEKERTNLNKGVNVKSVPDKSKIDA 524

Query: 3863 XXXXXXXXXXPK---EGNEAMLHTSQSYEDPTLQGVASLEISFETNGEQKSGDDEDLFAR 3693
                       +   + N   ++ ++S +    +  + +EI+FE +G+ +  DD+D+FAR
Sbjct: 525  SKSVSNGNQFVETSHDDNGESVNVNESNQQSAFETESCMEITFEDDGKTEYFDDDDIFAR 584

Query: 3692 LVAGETL-MNIPADSSPAEKPSDLEDISASDCEWEDGVIDGKSAVLNKQTVHELNSYLAH 3516
            L AGE + +  P + S  ++PS     S SD EWE+GV++GK   +      E N     
Sbjct: 585  LAAGEPVTLPSPEEKSLRKQPSG----SDSDFEWEEGVVEGKWDGVTPGMNAEHNLLNKE 640

Query: 3515 DDMEDDSGVEWEDGCASISKDVSPPPAECSESLSRGALEEEAEYQEAIRRSLVDLKGSGD 3336
             ++ DDS VEWE+  +   K  S  P E    LS+G  EEE++ QEAIRRSL D+     
Sbjct: 641  SNITDDSEVEWEEEPSDAPKS-SSGPVESGRMLSKGYWEEESDLQEAIRRSLTDVGVEKS 699

Query: 3335 SNASCENLKSGDAGLIDNLGESSSIINEYSIPESSIPVKDNVKSCKSSFETQTNKMIDNQ 3156
            ++   + ++S + G  +NL E    ++E     +S    D V     S E          
Sbjct: 700  NSFPSDVIESKNLG--ENLDEDFGSLHEKGDTGASSFPGDAVNWQNKSCENLDRPRKPCT 757

Query: 3155 VKLDMPQHSNNSETQSTPRLGVDLVGLELSPGDAPGRCSNSVQDKTNDLRTQEEIIERVK 2976
            V       + NS    +P    D     LS        S+S Q + N+       +E+  
Sbjct: 758  VNEPSISETFNSPESPSPVHNSDKNMTILSKFSERSDGSHSEQSRHNETAEFVATLEKEV 817

Query: 2975 NCNPEKDILIQEQQGDIKS-SKVXXXXXXXXXXXXXXXTPYTLSGDLHTFTHVDEPHLEL 2799
            +    K + + ++   + + S                  P T+  D  T +  DEP    
Sbjct: 818  DFPTGKHLDVSKEVDGLSTISDSWFKDNSHSFDAAHGDIPDTIQVDKKTGSE-DEP---- 872

Query: 2798 EAKVDDRLHESLISESSSFADVENKSDVENKSDFEPKSSPGH------------------ 2673
                      +L+S++ S  + E   D + K DFE K S                     
Sbjct: 873  ---------SNLVSDNKSSIEAEIL-DQDKKIDFEAKPSQQSVDTVNLSIPTVQSSANKV 922

Query: 2672 -NVLHFEKEKYGG---------------NSSFIENMVEQVPXXXXXXXXXXXXXXXXXXX 2541
             + LH E+E  G                 S+   N  E++                    
Sbjct: 923  ISDLHIEQELSGDITYENCVNKAEQHTDMSTIKGNDNEEIKFSKASLDEELLILDQECIN 982

Query: 2540 LGNEQRRLERNAESVSGEMFAECQELLQMFGLPYIIAPMEAEAQCAFMELANLVDGVVTD 2361
            + +EQR+LERNAESVS EMFAECQELLQMFGLPYIIAPMEAEAQCA+MEL NLVDGVVTD
Sbjct: 983  MVDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTD 1042

Query: 2360 DSDAFLFGARSVYKNIFDDRKYVETYFMKDIESELGLDRDKLIRMALLLGSDYTEGISGI 2181
            DSD FLFGARSVYKNIFDDRKYVETYFM+DIE ELGL R+KL+RMALLLGSDYTEG+SGI
Sbjct: 1043 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTEGVSGI 1102

Query: 2180 GIVNAIEVVNAFPEEDGLRQFRKWIESPDPSILGKFDVQEGCGSRKRGSKIRENEKNKHG 2001
            GIVNAIEVVNAFPEEDGL +FR+WIESPDP+ILGK +VQEG  +RKRG K  E + N   
Sbjct: 1103 GIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKDVNGTK 1162

Query: 2000 GKLEGSS-------------DCDLNMXXXXXXXXXXKQIFMEKHRNVSKNWHIPSTFPSD 1860
                GS                D NM          KQIFM+KHRNVSKNWHIPS+FPS+
Sbjct: 1163 TSTRGSESNNGTSSLDQNSFQADKNM-QSTDCTDDIKQIFMDKHRNVSKNWHIPSSFPSE 1221

Query: 1859 VVIAAYASPQVDNSTDSFSWGRPDLVTLHKVCWEKFGWGSKKADEVLLPVLKEYDKHETQ 1680
             VI+AY+ PQVD ST+ F+WGRPDL  L K+CWEKFGWGS+K+DE+LLPVL+E +K ETQ
Sbjct: 1222 AVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDELLLPVLRESEKRETQ 1281

Query: 1679 LRLEAFYTFNEKFAKIRSKRIKSALKGVRGNKSEDVMNDSGEGDSKNRKRRKANYVEAKT 1500
            LR+EAFYTFNE+FAKIRSKRIK A+KG+ GN+S ++++D  +  SK+R++R+A+ V++  
Sbjct: 1282 LRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVSKSRRKRRASPVQSGD 1341

Query: 1499 NEVEKDSGLRDH--GVIKQKIAKILKPKQSRGRNSQGEAVEGIDTQPSEEASMTXXXXXX 1326
            ++  + S  ++      + K      PK SR R S G+ V   + +  E    T      
Sbjct: 1342 DKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDV-SFEMRTPEPQLQTLRRRET 1400

Query: 1325 XXXXXXXXXXXXXXXRKKNKINSCLEDVGTSSD-GEFNNETEERAPWEFERPSKVRRSER 1149
                            ++ K +S  +   TSS  G+  N  +E    + ++P +VRRS  
Sbjct: 1401 NKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQEVDGEKLDQPREVRRSMH 1460

Query: 1148 PRKAVNYTISNEDILEECCATTSKLDGFETSHNKVIGNSLSGKXXXXXXXXXXXXXXXXE 969
             R  VNYT+ +   LE+    + K    E +  K  G  +  K                 
Sbjct: 1461 TRNPVNYTVKD---LEDEGGLSHKESSGEDAMEKEAGEDV--KEKIQCEAREPSLDNIYG 1515

Query: 968  DFLESGGGFCSEVTEPSQANLGDIGNAV-VEDQLSEGYLKMGGGFCLEDDAARGNTDEYP 792
            D+LE+GGGFC    +    +L D    V +E + +  YLKMGGGF +E D  + +T +  
Sbjct: 1516 DYLETGGGFC---MDERGTDLPDANQDVDLETEPTNDYLKMGGGFYMEGDIDQPDTSQ-- 1570

Query: 791  GKAAESSQVNSRSDGDPLAEDHISEEYLKIGGGFCLDDDEAADGNRD 651
                         D +P +E   + +YLK+GGGFC+++ E   GN D
Sbjct: 1571 -------------DVNPFSETGSANDYLKMGGGFCMEESETI-GNPD 1603



 Score =  258 bits (658), Expect = 2e-65
 Identities = 151/247 (61%), Positives = 167/247 (67%), Gaps = 1/247 (0%)
 Frame = -1

Query: 5186 MGVHNLWELLAPVGRRVSVETLAGKKLAIDASIWMIQFMKAMRDEKGEMIRNAHLVGFFR 5007
            MGVH LWELLAPVGRRVSVETLAGKKLAIDASIWM+QFMKAMRDEKGEMIRNAHL+GFFR
Sbjct: 1    MGVHGLWELLAPVGRRVSVETLAGKKLAIDASIWMVQFMKAMRDEKGEMIRNAHLLGFFR 60

Query: 5006 RICKLLFLRVKPVFVFDGATPALKRRTVIARRRQRENAQTKIRKTAEKLLLNQLKAMRLK 4827
            RICKLL+L+ KPVFVFDGATP LKRRTVIARRRQRENAQ KIRKTAEKLLLNQLK MRLK
Sbjct: 61   RICKLLYLKTKPVFVFDGATPILKRRTVIARRRQRENAQAKIRKTAEKLLLNQLKQMRLK 120

Query: 4826 ELQKNLQEQRQQDDSEPKMVSSKIIENAKGKRV-VDETIMANHLSEDENISAATCSREAL 4650
            EL K+L  QR+   +  K          KGK V  D     N +  + N+         L
Sbjct: 121  ELAKDLDNQRKMQKNNNK---------DKGKMVSSDNQSDTNFVGCNANVELTKEGDVKL 171

Query: 4649 DEMLAASIAAEEDGSFSPDASTSGAGVHYXXXXXXXXEMILPAMHGNVDPAVLASLPPSM 4470
             E L     A +DG  + D       V           +ILP + GN+DP VLA+LP SM
Sbjct: 172  KEKLEVPSIA-KDGGHNEDEDEDEDEV-----------IILPDIDGNIDPDVLAALPQSM 219

Query: 4469 QLDLLVQ 4449
            Q  LL Q
Sbjct: 220  QRQLLKQ 226


>KJB11467.1 hypothetical protein B456_001G260400 [Gossypium raimondii]
          Length = 1666

 Score =  899 bits (2324), Expect = 0.0
 Identities = 593/1406 (42%), Positives = 786/1406 (55%), Gaps = 57/1406 (4%)
 Frame = -1

Query: 4697 SEDENISAATCSREALDEMLAASIAAEEDGSFSPDASTSGAGVHYXXXXXXXXEMILPAM 4518
            +E + +++ + S+E LDEMLAAS+A +ED + + +ASTS A +          EMILPAM
Sbjct: 208  TEHDAMTSTSYSQEKLDEMLAASLATQEDSNLA-NASTSVAAIPSEDDGDEDEEMILPAM 266

Query: 4517 HGNVDPAVLASLPPSMQLDLLVQMRERLMAENRQRYQKVKKVPSRFSELQIQAYLKTVAF 4338
            HGNVDPAVLA+LPPS+QLDLL QMRERLMAENRQ+YQKVKK P +FSELQIQ+YLKTVAF
Sbjct: 267  HGNVDPAVLAALPPSLQLDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSYLKTVAF 326

Query: 4337 RREIDAVQKSAAGKGLGGMQTSRIASEANREFIFSSSFTGDKQVLASGG-EVKTDARPTE 4161
            RREID VQ++AAG+G+ G+QTSRIASEANREFIFSSSFTGDKQ L S   E+  D +   
Sbjct: 327  RREIDEVQRAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQALTSARKEIDEDKQQER 386

Query: 4160 NSRVDVSSKAFNDIVSITRSNQTEECSRDTAGTELPKGVETYVDERGRIRVSRGRAMGIR 3981
            +S  D  S     + S  +SN   E   D + +   + V TYVD  GRIRVSR R MGIR
Sbjct: 387  HS--DHPSGFLGSVKSSCKSNVAAESVPDESTSAPDEDVGTYVDATGRIRVSRVRGMGIR 444

Query: 3980 MTRDLQRNLELMKESEQVRVPSEEYVNNEXXXXXXXXXXXXXXXXXXXXPK---EGNEAM 3810
            MTRDLQRNL+LMKE E+ R    + VN +                     +   + N   
Sbjct: 445  MTRDLQRNLDLMKEIEKERTNLNKGVNVKSVPDKSKIDASKSVSNGNQFVETSHDDNGES 504

Query: 3809 LHTSQSYEDPTLQGVASLEISFETNGEQKSGDDEDLFARLVAGETL-MNIPADSSPAEKP 3633
            ++ ++S +    +  + +EI+FE +G+ +  DD+D+FARL AGE + +  P + S  ++P
Sbjct: 505  VNVNESNQQSAFETESCMEITFEDDGKTEYFDDDDIFARLAAGEPVTLPSPEEKSLRKQP 564

Query: 3632 SDLEDISASDCEWEDGVIDGKSAVLNKQTVHELNSYLAHDDMEDDSGVEWEDGCASISKD 3453
            S     S SD EWE+GV++GK   +      E N      ++ DDS VEWE+  +   K 
Sbjct: 565  SG----SDSDFEWEEGVVEGKWDGVTPGMNAEHNLLNKESNITDDSEVEWEEEPSDAPKS 620

Query: 3452 VSPPPAECSESLSRGALEEEAEYQEAIRRSLVDLKGSGDSNASCENLKSGDAGLIDNLGE 3273
             S  P E    LS+G  EEE++ QEAIRRSL D+     ++   + ++S + G  +NL E
Sbjct: 621  -SSGPVESGRMLSKGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESKNLG--ENLDE 677

Query: 3272 SSSIINEYSIPESSIPVKDNVKSCKSSFETQTNKMIDNQVKLDMPQHSNNSETQSTPRLG 3093
                ++E     +S    D V     S E          V       + NS    +P   
Sbjct: 678  DFGSLHEKGDTGASSFPGDAVNWQNKSCENLDRPRKPCTVNEPSISETFNSPESPSPVHN 737

Query: 3092 VDLVGLELSPGDAPGRCSNSVQDKTNDLRTQEEIIERVKNCNPEKDILIQEQQGDIKS-S 2916
             D     LS        S+S Q + N+       +E+  +    K + + ++   + + S
Sbjct: 738  SDKNMTILSKFSERSDGSHSEQSRHNETAEFVATLEKEVDFPTGKHLDVSKEVDGLSTIS 797

Query: 2915 KVXXXXXXXXXXXXXXXTPYTLSGDLHTFTHVDEPHLELEAKVDDRLHESLISESSSFAD 2736
                              P T+  D  T +  DEP              +L+S++ S  +
Sbjct: 798  DSWFKDNSHSFDAAHGDIPDTIQVDKKTGSE-DEP-------------SNLVSDNKSSIE 843

Query: 2735 VENKSDVENKSDFEPKSSPGH-------------------NVLHFEKEKYGG-------- 2637
             E   D + K DFE K S                      + LH E+E  G         
Sbjct: 844  AEIL-DQDKKIDFEAKPSQQSVDTVNLSIPTVQSSANKVISDLHIEQELSGDITYENCVN 902

Query: 2636 -------NSSFIENMVEQVPXXXXXXXXXXXXXXXXXXXLGNEQRRLERNAESVSGEMFA 2478
                    S+   N  E++                    + +EQR+LERNAESVS EMFA
Sbjct: 903  KAEQHTDMSTIKGNDNEEIKFSKASLDEELLILDQECINMVDEQRKLERNAESVSSEMFA 962

Query: 2477 ECQELLQMFGLPYIIAPMEAEAQCAFMELANLVDGVVTDDSDAFLFGARSVYKNIFDDRK 2298
            ECQELLQMFGLPYIIAPMEAEAQCA+MEL NLVDGVVTDDSD FLFGARSVYKNIFDDRK
Sbjct: 963  ECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDVFLFGARSVYKNIFDDRK 1022

Query: 2297 YVETYFMKDIESELGLDRDKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLRQF 2118
            YVETYFM+DIE ELGL R+KL+RMALLLGSDYTEG+SGIGIVNAIEVVNAFPEEDGL +F
Sbjct: 1023 YVETYFMQDIEKELGLTREKLMRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLHKF 1082

Query: 2117 RKWIESPDPSILGKFDVQEGCGSRKRGSKIRENEKNKHGGKLEGSS-------------D 1977
            R+WIESPDP+ILGK +VQEG  +RKRG K  E + N       GS               
Sbjct: 1083 REWIESPDPTILGKLNVQEGSSARKRGPKSTEKDVNGTKTSTRGSESNNGTSSLDQNSFQ 1142

Query: 1976 CDLNMXXXXXXXXXXKQIFMEKHRNVSKNWHIPSTFPSDVVIAAYASPQVDNSTDSFSWG 1797
             D NM          KQIFM+KHRNVSKNWHIPS+FPS+ VI+AY+ PQVD ST+ F+WG
Sbjct: 1143 ADKNM-QSTDCTDDIKQIFMDKHRNVSKNWHIPSSFPSEAVISAYSLPQVDKSTEPFTWG 1201

Query: 1796 RPDLVTLHKVCWEKFGWGSKKADEVLLPVLKEYDKHETQLRLEAFYTFNEKFAKIRSKRI 1617
            RPDL  L K+CWEKFGWGS+K+DE+LLPVL+E +K ETQLR+EAFYTFNE+FAKIRSKRI
Sbjct: 1202 RPDLFVLRKLCWEKFGWGSQKSDELLLPVLRESEKRETQLRMEAFYTFNERFAKIRSKRI 1261

Query: 1616 KSALKGVRGNKSEDVMNDSGEGDSKNRKRRKANYVEAKTNEVEKDSGLRDH--GVIKQKI 1443
            K A+KG+ GN+S ++++D  +  SK+R++R+A+ V++  ++  + S  ++      + K 
Sbjct: 1262 KKAVKGITGNQSSELIDDGMQQVSKSRRKRRASPVQSGDDKSGEPSNKKEDIASRCQSKS 1321

Query: 1442 AKILKPKQSRGRNSQGEAVEGIDTQPSEEASMTXXXXXXXXXXXXXXXXXXXXXRKKNKI 1263
                 PK SR R S G+ V   + +  E    T                      ++ K 
Sbjct: 1322 TDKSVPKTSRKRQSSGKDV-SFEMRTPEPQLQTLRRRETNKQSAGNGRGRGGGEGRRRKG 1380

Query: 1262 NSCLEDVGTSSD-GEFNNETEERAPWEFERPSKVRRSERPRKAVNYTISNEDILEECCAT 1086
            +S  +   TSS  G+  N  +E    + ++P +VRRS   R  VNYT+ +   LE+    
Sbjct: 1381 SSGFQQFETSSSGGDSGNVNQEVDGEKLDQPREVRRSMHTRNPVNYTVKD---LEDEGGL 1437

Query: 1085 TSKLDGFETSHNKVIGNSLSGKXXXXXXXXXXXXXXXXEDFLESGGGFCSEVTEPSQANL 906
            + K    E +  K  G  +  K                 D+LE+GGGFC    +    +L
Sbjct: 1438 SHKESSGEDAMEKEAGEDV--KEKIQCEAREPSLDNIYGDYLETGGGFC---MDERGTDL 1492

Query: 905  GDIGNAV-VEDQLSEGYLKMGGGFCLEDDAARGNTDEYPGKAAESSQVNSRSDGDPLAED 729
             D    V +E + +  YLKMGGGF +E D  + +T +               D +P +E 
Sbjct: 1493 PDANQDVDLETEPTNDYLKMGGGFYMEGDIDQPDTSQ---------------DVNPFSET 1537

Query: 728  HISEEYLKIGGGFCLDDDEAADGNRD 651
              + +YLK+GGGFC+++ E   GN D
Sbjct: 1538 GSANDYLKMGGGFCMEESETI-GNPD 1562



 Score =  193 bits (491), Expect = 9e-46
 Identities = 121/226 (53%), Positives = 140/226 (61%), Gaps = 2/226 (0%)
 Frame = -1

Query: 5084 MIQFMKAMRDEKGEMIRNAHLVGFFRRICKLLFLRVKPVFVFDGATPALKRRTVIARRRQ 4905
            M+QFMKAMRDEKGEMIRNAHL+GFFRRICKLL+L+ KPVFVFDGATP LKRRTVIARRRQ
Sbjct: 1    MVQFMKAMRDEKGEMIRNAHLLGFFRRICKLLYLKTKPVFVFDGATPILKRRTVIARRRQ 60

Query: 4904 RENAQTKIRKTAEKLLLNQLKAMRLKELQKNLQEQRQQDDSEPKMVSSKIIENAKGKRV- 4728
            RENAQ KIRKTAEKLLLNQLK MRLKEL K+L  QR+   +  K          KGK V 
Sbjct: 61   RENAQAKIRKTAEKLLLNQLKQMRLKELAKDLDNQRKMQKNNNK---------DKGKMVS 111

Query: 4727 VDETIMANHLSEDENISAATCSREALDEMLAASIAAEEDGSFSPDASTSGAGVHYXXXXX 4548
             D     N +  + N+         L E L     A +DG  + D       V       
Sbjct: 112  SDNQSDTNFVGCNANVELTKEGDVKLKEKLEVPSIA-KDGGHNEDEDEDEDEV------- 163

Query: 4547 XXXEMILPAMHGNVDPAVLASLPPSMQLDLLVQ-MRERLMAENRQR 4413
                +ILP + GN+DP VLA+LP SMQ  LL Q +   L   N++R
Sbjct: 164  ----IILPDIDGNIDPDVLAALPQSMQRQLLKQILLNDLNQSNKER 205